0.020890 0.000000 0.000000 0.000000 0.020890 0.000000 0.000000 0.000000 0.005869 0.00000 0.00000 0.00000 Nandhagopal, N. Simpson, A.A. Johnson, M.C. Francisco, A.B. Schatz, G.W. Rossmann, M.G. Vogt, V.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 47.870 47.870 170.390 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 S C N 149 N C N 150 N C N 151 N C N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N C N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C N 218 N C N 219 N S N 220 N C N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 S C N 235 N C N 236 N O N 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C Y 242 N C Y 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N C N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N O N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 R C N 292 N O N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N N Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C Y 340 N C Y 341 N C N 342 N O N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 N C N 360 N C N 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing Y 233 N doub Y 234 N sing Y 235 N sing N 236 N sing Y 237 N doub N 238 N sing Y 239 N doub N 240 N sing Y 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N sing Y 311 N doub N 312 N sing Y 313 N doub N 314 N sing Y 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 335 275 282 10.1016/j.jmb.2003.10.034 14659756 Dimeric rous sarcoma virus capsid protein structure relevant to immature gag assembly 2004 10.2210/pdb1p7n/pdb pdb_00001p7n 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 CCD 2002-06-20 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.9 1.0 14-ID-B APS 0.9 SYNCHROTRON APS BEAMLINE 14-ID-B 18736.674 GAG POLYPROTEIN CAPSID PROTEIN P27 N-terminal domain 1 man polymer no no GPTSPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPH DVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVA ITASALQAFREVARLA GPTSPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPH DVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVA ITASALQAFREVARLA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Alpharetrovirus Escherichia sample 11886 Rous sarcoma virus 562 Escherichia coli 1 2.60 52.73 VAPOR DIFFUSION, HANGING DROP 7.5 10 mM HEPES-sodium buffer and 0.8M potassium sodium tartrate tetrahydrate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references Refinement description 1 0 2003-12-23 1 1 2008-04-29 1 2 2011-07-13 1 3 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details The same protein without the upstream extension SEQUENCE The protein sequence contains the N-terminal domain of capsid protein P27 with an upstream 25-amino acid extension C-terminal of GAG P10 PROTEIN. RCSB Y RCSB 2003-05-02 REL REL 1EM9 PDB ENTRY 1EM9 PDB experimental model GLY -28 n 1 GLY -28 A PRO -27 n 2 PRO -27 A THR -26 n 3 THR -26 A SER -25 n 4 SER -25 A PRO -24 n 5 PRO -24 A GLY -23 n 6 GLY -23 A PRO -22 n 7 PRO -22 A ALA -21 n 8 ALA -21 A LEU -20 n 9 LEU -20 A THR -19 n 10 THR -19 A ASP -18 n 11 ASP -18 A TRP -17 n 12 TRP -17 A ALA -16 n 13 ALA -16 A ARG -15 n 14 ARG -15 A VAL -14 n 15 VAL -14 A ARG -13 n 16 ARG -13 A GLU -12 n 17 GLU -12 A GLU -11 n 18 GLU -11 A LEU -10 n 19 LEU -10 A ALA -9 n 20 ALA -9 A SER -8 n 21 SER -8 A THR -7 n 22 THR -7 A GLY -6 n 23 GLY -6 A PRO -5 n 24 PRO -5 A PRO -4 n 25 PRO -4 A VAL -3 n 26 VAL -3 A VAL -2 n 27 VAL -2 A ALA -1 n 28 ALA -1 A MET 0 n 29 MET 0 A PRO 1 n 30 PRO 1 A VAL 2 n 31 VAL 2 A VAL 3 n 32 VAL 3 A ILE 4 n 33 ILE 4 A LYS 5 n 34 LYS 5 A THR 6 n 35 THR 6 A GLU 7 n 36 GLU 7 A GLY 8 n 37 GLY 8 A PRO 9 n 38 PRO 9 A ALA 10 n 39 ALA 10 A TRP 11 n 40 TRP 11 A THR 12 n 41 THR 12 A PRO 13 n 42 PRO 13 A LEU 14 n 43 LEU 14 A GLU 15 n 44 GLU 15 A PRO 16 n 45 PRO 16 A LYS 17 n 46 LYS 17 A LEU 18 n 47 LEU 18 A ILE 19 n 48 ILE 19 A THR 20 n 49 THR 20 A ARG 21 n 50 ARG 21 A LEU 22 n 51 LEU 22 A ALA 23 n 52 ALA 23 A ASP 24 n 53 ASP 24 A THR 25 n 54 THR 25 A VAL 26 n 55 VAL 26 A ARG 27 n 56 ARG 27 A THR 28 n 57 THR 28 A LYS 29 n 58 LYS 29 A GLY 30 n 59 GLY 30 A LEU 31 n 60 LEU 31 A ARG 32 n 61 ARG 32 A SER 33 n 62 SER 33 A PRO 34 n 63 PRO 34 A ILE 35 n 64 ILE 35 A THR 36 n 65 THR 36 A MET 37 n 66 MET 37 A ALA 38 n 67 ALA 38 A GLU 39 n 68 GLU 39 A VAL 40 n 69 VAL 40 A GLU 41 n 70 GLU 41 A ALA 42 n 71 ALA 42 A LEU 43 n 72 LEU 43 A MET 44 n 73 MET 44 A SER 45 n 74 SER 45 A SER 46 n 75 SER 46 A PRO 47 n 76 PRO 47 A LEU 48 n 77 LEU 48 A LEU 49 n 78 LEU 49 A PRO 50 n 79 PRO 50 A HIS 51 n 80 HIS 51 A ASP 52 n 81 ASP 52 A VAL 53 n 82 VAL 53 A THR 54 n 83 THR 54 A ASN 55 n 84 ASN 55 A LEU 56 n 85 LEU 56 A MET 57 n 86 MET 57 A ARG 58 n 87 ARG 58 A VAL 59 n 88 VAL 59 A ILE 60 n 89 ILE 60 A LEU 61 n 90 LEU 61 A GLY 62 n 91 GLY 62 A PRO 63 n 92 PRO 63 A ALA 64 n 93 ALA 64 A PRO 65 n 94 PRO 65 A TYR 66 n 95 TYR 66 A ALA 67 n 96 ALA 67 A LEU 68 n 97 LEU 68 A TRP 69 n 98 TRP 69 A MET 70 n 99 MET 70 A ASP 71 n 100 ASP 71 A ALA 72 n 101 ALA 72 A TRP 73 n 102 TRP 73 A GLY 74 n 103 GLY 74 A VAL 75 n 104 VAL 75 A GLN 76 n 105 GLN 76 A LEU 77 n 106 LEU 77 A GLN 78 n 107 GLN 78 A THR 79 n 108 THR 79 A VAL 80 n 109 VAL 80 A ILE 81 n 110 ILE 81 A ALA 82 n 111 ALA 82 A ALA 83 n 112 ALA 83 A ALA 84 n 113 ALA 84 A THR 85 n 114 THR 85 A ARG 86 n 115 ARG 86 A ASP 87 n 116 ASP 87 A PRO 88 n 117 PRO 88 A ARG 89 n 118 ARG 89 A HIS 90 n 119 HIS 90 A PRO 91 n 120 PRO 91 A ALA 92 n 121 ALA 92 A ASN 93 n 122 ASN 93 A GLY 94 n 123 GLY 94 A GLN 95 n 124 GLN 95 A GLY 96 n 125 GLY 96 A ARG 97 n 126 ARG 97 A GLY 98 n 127 GLY 98 A GLU 99 n 128 GLU 99 A ARG 100 n 129 ARG 100 A THR 101 n 130 THR 101 A ASN 102 n 131 ASN 102 A LEU 103 n 132 LEU 103 A ASN 104 n 133 ASN 104 A ARG 105 n 134 ARG 105 A LEU 106 n 135 LEU 106 A LYS 107 n 136 LYS 107 A GLY 108 n 137 GLY 108 A LEU 109 n 138 LEU 109 A ALA 110 n 139 ALA 110 A ASP 111 n 140 ASP 111 A GLY 112 n 141 GLY 112 A MET 113 n 142 MET 113 A VAL 114 n 143 VAL 114 A GLY 115 n 144 GLY 115 A ASN 116 n 145 ASN 116 A PRO 117 n 146 PRO 117 A GLN 118 n 147 GLN 118 A GLY 119 n 148 GLY 119 A GLN 120 n 149 GLN 120 A ALA 121 n 150 ALA 121 A ALA 122 n 151 ALA 122 A LEU 123 n 152 LEU 123 A LEU 124 n 153 LEU 124 A ARG 125 n 154 ARG 125 A PRO 126 n 155 PRO 126 A GLY 127 n 156 GLY 127 A GLU 128 n 157 GLU 128 A LEU 129 n 158 LEU 129 A VAL 130 n 159 VAL 130 A ALA 131 n 160 ALA 131 A ILE 132 n 161 ILE 132 A THR 133 n 162 THR 133 A ALA 134 n 163 ALA 134 A SER 135 n 164 SER 135 A ALA 136 n 165 ALA 136 A LEU 137 n 166 LEU 137 A GLN 138 n 167 GLN 138 A ALA 139 n 168 ALA 139 A PHE 140 n 169 PHE 140 A ARG 141 n 170 ARG 141 A GLU 142 n 171 GLU 142 A VAL 143 n 172 VAL 143 A ALA 144 n 173 ALA 144 A ARG 145 n 174 ARG 145 A LEU 146 n 175 LEU 146 A ALA 147 n 176 ALA 147 A author_and_software_defined_assembly PISA,PQS 2 dimeric 3960 -34 17570 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_775 -y+2,-x+2,-z+1/2 crystal symmetry operation 95.7400000000 95.7400000000 85.1950000000 1 A PRO -27 -51.72 102.97 1 A PRO -24 -59.46 -70.40 1 A GLU -11 -54.48 -75.30 1 A LEU -10 -35.27 -39.75 1 A SER -8 -65.70 24.24 1 A PRO -4 -16.76 -91.41 1 A VAL -2 -167.40 -143.10 1 A ALA -1 -68.60 68.61 1 A LYS 5 70.39 53.46 1 A ARG 27 -63.42 -78.92 1 A THR 28 -48.67 -86.76 1 A LYS 29 -44.18 -13.21 1 A LEU 31 -130.27 -41.87 1 A GLU 99 -62.75 48.33 1 A THR 101 -54.71 172.42 PROTEIN_REP.PARAM PROTEIN.TOP 56.4 10.81 0.00 0.00 10.17 0.00 -20.98 0.298 0.016 0.26 0.26 2.60 26.50 331 5856 5.7 87.9 RANDOM 558128.82 558128.82 0 1 RESTRAINED THROUGHOUT 0 MOLECULAR REPLACEMENT PDB ENTRY 1EM9 FLAT MODEL 38.5603 0.303224 0.55 0.38 5 0.50 0.41 2.60 26.50 0 1315 0 0 1315 0.007 1.4 20.5 1.32 1.70 1.50 3.02 2.00 2.01 2.00 3.25 2.50 0.357 0.062 0.343 2.76 33 521 6 6.0 52.1 20.3 2.45 30.0 1P7N 7911 6743 0.055 1 8.3 85.2 0.329 2.45 2.54 396 1 51.4 refinement CNS 1.1 data reduction DENZO data scaling SCALEPACK phasing AMoRE Dimeric Rous Sarcoma virus Capsid protein structure with an upstream 25-amino acid residue extension of C-terminal of Gag p10 protein 1 N N A ASP -18 A ASP 11 HELX_P A SER -8 A SER 21 1 1 11 A GLU 15 A GLU 44 HELX_P A THR 28 A THR 57 1 2 14 A SER 33 A SER 62 HELX_P A MET 44 A MET 73 1 3 12 A LEU 49 A LEU 78 HELX_P A GLY 62 A GLY 91 1 4 14 A GLY 62 A GLY 91 HELX_P A ASP 87 A ASP 116 1 5 26 A ASN 102 A ASN 131 HELX_P A LYS 107 A LYS 136 1 6 6 A ASN 116 A ASN 145 HELX_P A LEU 124 A LEU 153 1 7 9 A ARG 125 A ARG 154 HELX_P A LEU 146 A LEU 175 1 8 22 VIRAL PROTEIN Retrovirus, capsid protein, Gag Polyprotein, immature gag, Viral protein GAG_RSVP UNP 1 215 P03322 PGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTN LMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITAS ALQAFREVARLA 215 386 1P7N -24 147 P03322 A 1 5 176 1 cloning artifact GLY -28 1P7N A P03322 UNP 1 1 cloning artifact PRO -27 1P7N A P03322 UNP 2 1 cloning artifact THR -26 1P7N A P03322 UNP 3 1 cloning artifact SER -25 1P7N A P03322 UNP 4 92 P 41 21 2