0.014914 0.008611 0.000000 0.000000 0.017221 0.000000 0.000000 0.000000 0.004505 0.00000 0.00000 0.00000 Nummelin, H. Merckel, M.C. Skurnik, M. Goldman, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 67.050 67.050 221.953 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N C N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub N 309 N sing Y 310 N doub N 311 N sing Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing UK Embo J. EMJODG 0897 0261-4189 23 701 711 10.1038/sj.emboj.7600100 14765110 The Yersinia adhesin YadA collagen-binding domain structure is a novel left-handed parallel beta-roll. 2004 10.2210/pdb1p9h/pdb pdb_00001p9h 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2000-06-19 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.91020 1.0 X11 EMBL/DESY, HAMBURG 0.91020 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 22806.059 Invasin COLLAGEN-BINDING DOMAIN 1 man polymer 18.015 water 105 nat water Outer membrane adhesin no no MRGSHHHHHHDDYDGIPNLTAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSIA TGVNSVAIGPLSKALGDSAVTYGAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAANHGYSIAIGD RSKTDRENSVSIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYAD MRGSHHHHHHDDYDGIPNLTAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSIA TGVNSVAIGPLSKALGDSAVTYGAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAANHGYSIAIGD RSKTDRENSVSIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYAD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Yersinia Escherichia sample YADA OR YOPA OR INVA OR YOP1 630 Yersinia enterocolitica 562 Escherichia coli M15(pREP4) pQE-30 plasmid pHN-1 1 2.43 48.92 VAPOR DIFFUSION, SITTING DROP 6.5 PEG 8000, sodium acetate, sodium-cacotylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K 298 chem_comp_atom chem_comp_bond database_2 diffrn_source struct_ref_seq_dif repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references 1 0 2004-03-23 1 1 2008-04-29 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _diffrn_source.pdbx_synchrotron_site _struct_ref_seq_dif.details RCSB Y RCSB 2003-05-12 REL REL HOH water WAT 221 2 HOH HOH 242 A WAT 222 2 HOH HOH 243 A WAT 223 2 HOH HOH 244 A WAT 224 2 HOH HOH 245 A WAT 225 2 HOH HOH 246 A WAT 226 2 HOH HOH 247 A WAT 227 2 HOH HOH 248 A WAT 228 2 HOH HOH 249 A WAT 229 2 HOH HOH 250 A WAT 230 2 HOH HOH 251 A WAT 231 2 HOH HOH 252 A WAT 232 2 HOH HOH 253 A WAT 233 2 HOH HOH 254 A WAT 234 2 HOH HOH 255 A WAT 235 2 HOH HOH 256 A WAT 236 2 HOH HOH 257 A WAT 237 2 HOH HOH 258 A WAT 238 2 HOH HOH 259 A WAT 239 2 HOH HOH 260 A WAT 240 2 HOH HOH 261 A WAT 241 2 HOH HOH 262 A WAT 242 2 HOH HOH 263 A WAT 243 2 HOH HOH 264 A WAT 244 2 HOH HOH 265 A WAT 245 2 HOH HOH 266 A WAT 246 2 HOH HOH 267 A WAT 247 2 HOH HOH 268 A WAT 248 2 HOH HOH 269 A WAT 249 2 HOH HOH 270 A WAT 250 2 HOH HOH 271 A WAT 251 2 HOH HOH 272 A WAT 252 2 HOH HOH 273 A WAT 253 2 HOH HOH 274 A WAT 254 2 HOH HOH 275 A WAT 255 2 HOH HOH 276 A WAT 256 2 HOH HOH 277 A WAT 257 2 HOH HOH 278 A WAT 258 2 HOH HOH 279 A WAT 259 2 HOH HOH 280 A WAT 260 2 HOH HOH 281 A WAT 261 2 HOH HOH 282 A WAT 262 2 HOH HOH 283 A WAT 263 2 HOH HOH 284 A WAT 264 2 HOH HOH 285 A WAT 265 2 HOH HOH 286 A WAT 266 2 HOH HOH 287 A WAT 267 2 HOH HOH 288 A WAT 268 2 HOH HOH 289 A WAT 269 2 HOH HOH 290 A WAT 270 2 HOH HOH 291 A WAT 271 2 HOH HOH 292 A WAT 272 2 HOH HOH 293 A WAT 273 2 HOH HOH 294 A WAT 274 2 HOH HOH 295 A WAT 275 2 HOH HOH 296 A WAT 276 2 HOH HOH 297 A WAT 277 2 HOH HOH 298 A WAT 278 2 HOH HOH 299 A WAT 279 2 HOH HOH 300 A WAT 280 2 HOH HOH 301 A WAT 281 2 HOH HOH 302 A WAT 282 2 HOH HOH 303 A WAT 283 2 HOH HOH 304 A WAT 284 2 HOH HOH 305 A WAT 285 2 HOH HOH 306 A WAT 286 2 HOH HOH 307 A WAT 287 2 HOH HOH 308 A WAT 288 2 HOH HOH 309 A WAT 289 2 HOH HOH 310 A WAT 290 2 HOH HOH 311 A WAT 291 2 HOH HOH 312 A WAT 292 2 HOH HOH 313 A WAT 293 2 HOH HOH 314 A WAT 294 2 HOH HOH 315 A WAT 295 2 HOH HOH 316 A WAT 296 2 HOH HOH 317 A WAT 297 2 HOH HOH 318 A WAT 298 2 HOH HOH 319 A WAT 299 2 HOH HOH 320 A WAT 300 2 HOH HOH 321 A WAT 301 2 HOH HOH 322 A WAT 302 2 HOH HOH 323 A WAT 303 2 HOH HOH 324 A WAT 304 2 HOH HOH 325 A WAT 305 2 HOH HOH 326 A WAT 306 2 HOH HOH 327 A WAT 307 2 HOH HOH 328 A WAT 308 2 HOH HOH 329 A WAT 309 2 HOH HOH 330 A WAT 310 2 HOH HOH 331 A WAT 311 2 HOH HOH 332 A WAT 312 2 HOH HOH 333 A WAT 313 2 HOH HOH 334 A WAT 314 2 HOH HOH 335 A WAT 315 2 HOH HOH 336 A WAT 316 2 HOH HOH 337 A WAT 317 2 HOH HOH 338 A WAT 318 2 HOH HOH 339 A WAT 319 2 HOH HOH 340 A WAT 320 2 HOH HOH 341 A WAT 321 2 HOH HOH 342 A WAT 322 2 HOH HOH 343 A WAT 323 2 HOH HOH 344 A WAT 324 2 HOH HOH 345 A WAT 325 2 HOH HOH 346 A n 1 16 A n 2 17 A n 3 18 A n 4 19 A n 5 20 A n 6 21 A n 7 22 A n 8 23 A n 9 24 A n 10 25 A n 11 26 A n 12 27 A n 13 28 A n 14 29 A n 15 30 A n 16 31 A PRO 32 n 17 PRO 32 A ASN 33 n 18 ASN 33 A LEU 34 n 19 LEU 34 A THR 35 n 20 THR 35 A ALA 36 n 21 ALA 36 A VAL 37 n 22 VAL 37 A GLN 38 n 23 GLN 38 A ILE 39 n 24 ILE 39 A SER 40 n 25 SER 40 A PRO 41 n 26 PRO 41 A ASN 42 n 27 ASN 42 A ALA 43 n 28 ALA 43 A ASP 44 n 29 ASP 44 A PRO 45 n 30 PRO 45 A ALA 46 n 31 ALA 46 A LEU 47 n 32 LEU 47 A GLY 48 n 33 GLY 48 A LEU 49 n 34 LEU 49 A GLU 50 n 35 GLU 50 A TYR 51 n 36 TYR 51 A n 37 52 A n 38 53 A n 39 54 A n 40 55 A n 41 56 A n 42 57 A n 43 58 A n 44 59 A n 45 60 A n 46 61 A GLY 62 n 47 GLY 62 A LEU 63 n 48 LEU 63 A ASN 64 n 49 ASN 64 A ALA 65 n 50 ALA 65 A SER 66 n 51 SER 66 A ALA 67 n 52 ALA 67 A LYS 68 n 53 LYS 68 A GLY 69 n 54 GLY 69 A ILE 70 n 55 ILE 70 A HIS 71 n 56 HIS 71 A SER 72 n 57 SER 72 A ILE 73 n 58 ILE 73 A ALA 74 n 59 ALA 74 A ILE 75 n 60 ILE 75 A GLY 76 n 61 GLY 76 A ALA 77 n 62 ALA 77 A THR 78 n 63 THR 78 A ALA 79 n 64 ALA 79 A GLU 80 n 65 GLU 80 A ALA 81 n 66 ALA 81 A ALA 82 n 67 ALA 82 A LYS 83 n 68 LYS 83 A GLY 84 n 69 GLY 84 A ALA 85 n 70 ALA 85 A ALA 86 n 71 ALA 86 A VAL 87 n 72 VAL 87 A ALA 88 n 73 ALA 88 A VAL 89 n 74 VAL 89 A GLY 90 n 75 GLY 90 A ALA 91 n 76 ALA 91 A GLY 92 n 77 GLY 92 A SER 93 n 78 SER 93 A ILE 94 n 79 ILE 94 A ALA 95 n 80 ALA 95 A THR 96 n 81 THR 96 A GLY 97 n 82 GLY 97 A VAL 98 n 83 VAL 98 A ASN 99 n 84 ASN 99 A SER 100 n 85 SER 100 A VAL 101 n 86 VAL 101 A ALA 102 n 87 ALA 102 A ILE 103 n 88 ILE 103 A GLY 104 n 89 GLY 104 A PRO 105 n 90 PRO 105 A LEU 106 n 91 LEU 106 A SER 107 n 92 SER 107 A LYS 108 n 93 LYS 108 A ALA 109 n 94 ALA 109 A LEU 110 n 95 LEU 110 A GLY 111 n 96 GLY 111 A ASP 112 n 97 ASP 112 A SER 113 n 98 SER 113 A ALA 114 n 99 ALA 114 A VAL 115 n 100 VAL 115 A THR 116 n 101 THR 116 A TYR 117 n 102 TYR 117 A GLY 118 n 103 GLY 118 A ALA 119 n 104 ALA 119 A ALA 120 n 105 ALA 120 A SER 121 n 106 SER 121 A THR 122 n 107 THR 122 A ALA 123 n 108 ALA 123 A GLN 124 n 109 GLN 124 A LYS 125 n 110 LYS 125 A ASP 126 n 111 ASP 126 A GLY 127 n 112 GLY 127 A VAL 128 n 113 VAL 128 A ALA 129 n 114 ALA 129 A ILE 130 n 115 ILE 130 A GLY 131 n 116 GLY 131 A ALA 132 n 117 ALA 132 A ARG 133 n 118 ARG 133 A ALA 134 n 119 ALA 134 A SER 135 n 120 SER 135 A THR 136 n 121 THR 136 A SER 137 n 122 SER 137 A ASP 138 n 123 ASP 138 A THR 139 n 124 THR 139 A GLY 140 n 125 GLY 140 A VAL 141 n 126 VAL 141 A ALA 142 n 127 ALA 142 A VAL 143 n 128 VAL 143 A GLY 144 n 129 GLY 144 A PHE 145 n 130 PHE 145 A ASN 146 n 131 ASN 146 A SER 147 n 132 SER 147 A LYS 148 n 133 LYS 148 A ALA 149 n 134 ALA 149 A ASP 150 n 135 ASP 150 A ALA 151 n 136 ALA 151 A LYS 152 n 137 LYS 152 A ASN 153 n 138 ASN 153 A SER 154 n 139 SER 154 A VAL 155 n 140 VAL 155 A ALA 156 n 141 ALA 156 A ILE 157 n 142 ILE 157 A GLY 158 n 143 GLY 158 A HIS 159 n 144 HIS 159 A SER 160 n 145 SER 160 A SER 161 n 146 SER 161 A HIS 162 n 147 HIS 162 A VAL 163 n 148 VAL 163 A ALA 164 n 149 ALA 164 A ALA 165 n 150 ALA 165 A ASN 166 n 151 ASN 166 A HIS 167 n 152 HIS 167 A GLY 168 n 153 GLY 168 A TYR 169 n 154 TYR 169 A SER 170 n 155 SER 170 A ILE 171 n 156 ILE 171 A ALA 172 n 157 ALA 172 A ILE 173 n 158 ILE 173 A GLY 174 n 159 GLY 174 A ASP 175 n 160 ASP 175 A ARG 176 n 161 ARG 176 A SER 177 n 162 SER 177 A ALA 178 n 163 LYS 178 A THR 179 n 164 THR 179 A ASP 180 n 165 ASP 180 A ARG 181 n 166 ARG 181 A GLU 182 n 167 GLU 182 A ASN 183 n 168 ASN 183 A SER 184 n 169 SER 184 A VAL 185 n 170 VAL 185 A SER 186 n 171 SER 186 A ILE 187 n 172 ILE 187 A GLY 188 n 173 GLY 188 A HIS 189 n 174 HIS 189 A GLU 190 n 175 GLU 190 A SER 191 n 176 SER 191 A LEU 192 n 177 LEU 192 A ASN 193 n 178 ASN 193 A ARG 194 n 179 ARG 194 A GLN 195 n 180 GLN 195 A LEU 196 n 181 LEU 196 A THR 197 n 182 THR 197 A HIS 198 n 183 HIS 198 A LEU 199 n 184 LEU 199 A ALA 200 n 185 ALA 200 A ALA 201 n 186 ALA 201 A GLY 202 n 187 GLY 202 A THR 203 n 188 THR 203 A LYS 204 n 189 LYS 204 A ASP 205 n 190 ASP 205 A THR 206 n 191 THR 206 A ASP 207 n 192 ASP 207 A ALA 208 n 193 ALA 208 A VAL 209 n 194 VAL 209 A ASN 210 n 195 ASN 210 A VAL 211 n 196 VAL 211 A ALA 212 n 197 ALA 212 A GLN 213 n 198 GLN 213 A LEU 214 n 199 LEU 214 A LYS 215 n 200 LYS 215 A ALA 216 n 201 LYS 216 A GLU 217 n 202 GLU 217 A ILE 218 n 203 ILE 218 A ALA 219 n 204 GLU 219 A LYS 220 n 205 LYS 220 A n 206 221 A n 207 222 A n 208 223 A n 209 224 A n 210 225 A n 211 226 A n 212 227 A n 213 228 A n 214 229 A n 215 230 A n 216 231 A n 217 232 A n 218 233 A n 219 234 A n 220 235 A n 221 236 A n 222 237 A n 223 238 A n 224 239 A n 225 240 A n 226 241 A author_and_software_defined_assembly PISA,PQS 3 trimeric 15080 -95 16840 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_565 -y,x-y+1,z crystal symmetry operation -33.5250000000 58.0670033237 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_455 -x+y-1,-x,z crystal symmetry operation -67.0500000000 0.0000000000 0.0000000000 A N ILE 39 A N ILE 24 A O ALA 74 A O ALA 59 A N ILE 73 A N ILE 58 A O ALA 88 A O ALA 73 A N VAL 87 A N VAL 72 A O ALA 102 A O ALA 87 A N VAL 101 A N VAL 86 A O THR 116 A O THR 101 A N TYR 117 A N TYR 102 A O ALA 129 A O ALA 114 A N ILE 130 A N ILE 115 A O ALA 142 A O ALA 127 A N VAL 141 A N VAL 126 A O ALA 156 A O ALA 141 A N ILE 157 A N ILE 142 A O ALA 172 A O ALA 157 A N ILE 171 A N ILE 156 A O SER 186 A O SER 171 A N SER 66 A N SER 51 A O ALA 81 A O ALA 66 A N GLU 80 A N GLU 65 A O ALA 95 A O ALA 80 A N ILE 94 A N ILE 79 A O ALA 109 A O ALA 94 A N LYS 108 A N LYS 93 A O ALA 123 A O ALA 108 A N THR 122 A N THR 107 A O THR 136 A O THR 121 A N SER 135 A N SER 120 A O ALA 149 A O ALA 134 A N LYS 148 A N LYS 133 A O VAL 163 A O VAL 148 1 A CG LYS 178 A CG LYS 163 1 Y 1 A CD LYS 178 A CD LYS 163 1 Y 1 A CE LYS 178 A CE LYS 163 1 Y 1 A NZ LYS 178 A NZ LYS 163 1 Y 1 A CG LYS 216 A CG LYS 201 1 Y 1 A CD LYS 216 A CD LYS 201 1 Y 1 A CE LYS 216 A CE LYS 201 1 Y 1 A NZ LYS 216 A NZ LYS 201 1 Y 1 A CG GLU 219 A CG GLU 204 1 Y 1 A CD GLU 219 A CD GLU 204 1 Y 1 A OE1 GLU 219 A OE1 GLU 204 1 Y 1 A OE2 GLU 219 A OE2 GLU 204 1 Y 1 A MET 16 A MET 1 1 Y 1 A ARG 17 A ARG 2 1 Y 1 A GLY 18 A GLY 3 1 Y 1 A SER 19 A SER 4 1 Y 1 A HIS 20 A HIS 5 1 Y 1 A HIS 21 A HIS 6 1 Y 1 A HIS 22 A HIS 7 1 Y 1 A HIS 23 A HIS 8 1 Y 1 A HIS 24 A HIS 9 1 Y 1 A HIS 25 A HIS 10 1 Y 1 A ASP 26 A ASP 11 1 Y 1 A ASP 27 A ASP 12 1 Y 1 A TYR 28 A TYR 13 1 Y 1 A ASP 29 A ASP 14 1 Y 1 A GLY 30 A GLY 15 1 Y 1 A ILE 31 A ILE 16 1 Y 1 A PRO 52 A PRO 37 1 Y 1 A VAL 53 A VAL 38 1 Y 1 A ARG 54 A ARG 39 1 Y 1 A PRO 55 A PRO 40 1 Y 1 A PRO 56 A PRO 41 1 Y 1 A VAL 57 A VAL 42 1 Y 1 A PRO 58 A PRO 43 1 Y 1 A GLY 59 A GLY 44 1 Y 1 A ALA 60 A ALA 45 1 Y 1 A GLY 61 A GLY 46 1 Y 1 A THR 221 A THR 206 1 Y 1 A GLN 222 A GLN 207 1 Y 1 A GLU 223 A GLU 208 1 Y 1 A ASN 224 A ASN 209 1 Y 1 A THR 225 A THR 210 1 Y 1 A ASN 226 A ASN 211 1 Y 1 A LYS 227 A LYS 212 1 Y 1 A ARG 228 A ARG 213 1 Y 1 A SER 229 A SER 214 1 Y 1 A ALA 230 A ALA 215 1 Y 1 A GLU 231 A GLU 216 1 Y 1 A LEU 232 A LEU 217 1 Y 1 A LEU 233 A LEU 218 1 Y 1 A ALA 234 A ALA 219 1 Y 1 A ASN 235 A ASN 220 1 Y 1 A ALA 236 A ALA 221 1 Y 1 A ASN 237 A ASN 222 1 Y 1 A ALA 238 A ALA 223 1 Y 1 A TYR 239 A TYR 224 1 Y 1 A ALA 240 A ALA 225 1 Y 1 A ASP 241 A ASP 226 1 Y 1 A THR 78 A 54.97 15.33 1 A ALA 85 56.80 9.64 1 A ASN 99 59.59 17.13 1 A SER 113 62.38 -0.10 1 A ASP 126 57.26 17.97 1 A THR 139 49.53 24.94 1 A ALA 149 -103.46 76.71 1 A HIS 167 -101.82 71.70 1 A TYR 169 49.70 28.97 1 A ARG 176 58.41 11.72 PROTEIN_REP.PARAM PROTEIN.TOP WATER.PARAM WATER.TOP 17.0 0.31 0.62 0.00 0.31 0.00 -0.63 0.2038 0.004 0.1956 1.55 19.87 2694 28429 27177 9.9 95.9 RANDOM 263358.66 263358.66 0.000000 1 RESTRAINED THROUGHOUT 0.0 MAD Engh & Huber FLAT MODEL 124.626 0.704203 0.18 0.16 5.00 0.12 0.09 1.55 19.87 105 1333 0 0 1228 0.004 1.4 26.9 0.66 0.275 0.013 0.233 1.65 417 3665 6 10.2 87.9 18.6 1.55 20.0 1P9H 28431 28240 -3.0 0.058 1 24.0 99.4 0.429 1.55 1.61 4.5 2763 1 99.4 refinement CNS 1.1 data reduction HKL-2000 data scaling SCALEPACK phasing SOLVE CRYSTAL STRUCTURE OF THE COLLAGEN-BINDING DOMAIN OF YERSINIA ADHESIN YadA 1 N N 2 N N A ASN 210 A ASN 195 HELX_P A LYS 220 A LYS 205 1 1 11 CELL ADHESION collagen-binding, left-handed beta-roll, CELL ADHESION YADA1_YEREN UNP 1 26 P31489 DDYDGIPNLTAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSIATGVNSVAIGP LSKALGDSAVTYGAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAANHGYSIAIGDRSKTDRENSV SIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYAD 26 241 1P9H 26 241 P31489 A 1 11 226 1 expression tag MET 16 1P9H A P31489 UNP 1 1 expression tag ARG 17 1P9H A P31489 UNP 2 1 expression tag GLY 18 1P9H A P31489 UNP 3 1 expression tag SER 19 1P9H A P31489 UNP 4 1 expression tag HIS 20 1P9H A P31489 UNP 5 1 expression tag HIS 21 1P9H A P31489 UNP 6 1 expression tag HIS 22 1P9H A P31489 UNP 7 1 expression tag HIS 23 1P9H A P31489 UNP 8 1 expression tag HIS 24 1P9H A P31489 UNP 9 1 expression tag HIS 25 1P9H A P31489 UNP 10 10 8 parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A VAL 37 A VAL 22 A ILE 39 A ILE 24 A ILE 73 A ILE 58 A ILE 75 A ILE 60 A VAL 87 A VAL 72 A VAL 89 A VAL 74 A VAL 101 A VAL 86 A ILE 103 A ILE 88 A VAL 115 A VAL 100 A TYR 117 A TYR 102 A VAL 128 A VAL 113 A ILE 130 A ILE 115 A VAL 141 A VAL 126 A VAL 143 A VAL 128 A VAL 155 A VAL 140 A ILE 157 A ILE 142 A ILE 171 A ILE 156 A ILE 173 A ILE 158 A VAL 185 A VAL 170 A SER 186 A SER 171 A SER 66 A SER 51 A ALA 67 A ALA 52 A GLU 80 A GLU 65 A ALA 81 A ALA 66 A ILE 94 A ILE 79 A ALA 95 A ALA 80 A LYS 108 A LYS 93 A ALA 109 A ALA 94 A THR 122 A THR 107 A ALA 123 A ALA 108 A SER 135 A SER 120 A THR 136 A THR 121 A LYS 148 A LYS 133 A ALA 149 A ALA 134 A HIS 162 A HIS 147 A VAL 163 A VAL 148 155 H 3 2