1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Wingens, M. Walma, T. Van Ingen, H. Stortelers, C. Van Leeuwen, J.E. Van Zoelen, E.J. Vuister, G.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 278 39114 39123 10.1074/jbc.M305603200 12869572 Structural Analysis of an Epidermal Growth Factor/Transforming Growth Factor-alpha Chimera with Unique ErbB Binding Specificity. 2003 10.2210/pdb1p9j/pdb pdb_00001p9j 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 6339.224 chimera of Epidermal growth factor(EGF) and Transforming growth factor alpha (TGF-alpha) TGF-alpha (residues 1-7), EGF (residues 8-54) 1 man polymer no no VVSHFNDCPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWWEL VVSHFNDCPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWWEL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Pichia sample TGF-alpha and EGF 9606 Homo sapiens 4922 Pichia pastoris X33 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list database_2 pdbx_database_status repository Initial release Version format compliance Version format compliance Database references Derived calculations Other Database references Other 1 0 2003-10-07 1 1 2008-04-29 1 2 2011-07-13 1 3 2020-02-05 1 4 2023-06-14 _pdbx_database_status.status_code_cs _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data chemical shift, J coupling constants and relaxation data RCSB Y RCSB 2003-05-12 REL REL REL REL structures with the lowest energy 98 36 2D NOESY 3D_15N-separated_NOESY 50 6.3 1 atm 298 K The structures are based on 660 are NOE-derived distance constraints, 98 dihedral angle restraints, and 9 distance restraints from hydrogen bonds. distance geometry followed by brief molecular dynamics run in water. 1 lowest energy 0.8mM T1E, 15N-labelled, 50mM phosphate buffer, 95% H20, 5%D20, pH 6.3, 20ug/mL pefabloc 95% H20, 5%D20, pH 6.3 Delaglio, F. processing NMRPipe 0203 Brunger, A. refinement X-PLOR 3.851 MacKerell, A.D. refinement CHARMM 22 800 Varian INOVA 600 Varian INOVA VAL 1 n 1 VAL 1 A VAL 2 n 2 VAL 2 A SER 3 n 3 SER 3 A HIS 4 n 4 HIS 4 A PHE 5 n 5 PHE 5 A ASN 6 n 6 ASN 6 A ASP 7 n 7 ASP 7 A CYS 8 n 8 CYS 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A SER 11 n 11 SER 11 A HIS 12 n 12 HIS 12 A ASP 13 n 13 ASP 13 A GLY 14 n 14 GLY 14 A TYR 15 n 15 TYR 15 A CYS 16 n 16 CYS 16 A LEU 17 n 17 LEU 17 A HIS 18 n 18 HIS 18 A ASP 19 n 19 ASP 19 A GLY 20 n 20 GLY 20 A VAL 21 n 21 VAL 21 A CYS 22 n 22 CYS 22 A MET 23 n 23 MET 23 A TYR 24 n 24 TYR 24 A ILE 25 n 25 ILE 25 A GLU 26 n 26 GLU 26 A ALA 27 n 27 ALA 27 A LEU 28 n 28 LEU 28 A ASP 29 n 29 ASP 29 A LYS 30 n 30 LYS 30 A TYR 31 n 31 TYR 31 A ALA 32 n 32 ALA 32 A CYS 33 n 33 CYS 33 A ASN 34 n 34 ASN 34 A CYS 35 n 35 CYS 35 A VAL 36 n 36 VAL 36 A VAL 37 n 37 VAL 37 A GLY 38 n 38 GLY 38 A TYR 39 n 39 TYR 39 A ILE 40 n 40 ILE 40 A GLY 41 n 41 GLY 41 A GLU 42 n 42 GLU 42 A ARG 43 n 43 ARG 43 A CYS 44 n 44 CYS 44 A GLN 45 n 45 GLN 45 A TYR 46 n 46 TYR 46 A ARG 47 n 47 ARG 47 A ASP 48 n 48 ASP 48 A LEU 49 n 49 LEU 49 A LYS 50 n 50 LYS 50 A TRP 51 n 51 TRP 51 A TRP 52 n 52 TRP 52 A GLU 53 n 53 GLU 53 A LEU 54 n 54 LEU 54 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 25 A N ILE 25 A O LYS 30 A O LYS 30 A N ILE 40 A N ILE 40 A O TYR 46 A O TYR 46 8 A A SER HIS 11 12 -148.85 9 A A SER HIS 11 12 -147.73 18 A A SER HIS 11 12 -147.73 29 A A SER HIS 11 12 -148.85 2 A ARG 43 0.086 SIDE CHAIN 5 A ARG 43 0.137 SIDE CHAIN 6 A ARG 43 0.101 SIDE CHAIN 9 A ARG 47 0.093 SIDE CHAIN 10 A TYR 46 0.077 SIDE CHAIN 11 A TYR 39 0.090 SIDE CHAIN 12 A ARG 43 0.154 SIDE CHAIN 15 A ARG 43 0.087 SIDE CHAIN 18 A ARG 47 0.093 SIDE CHAIN 22 A TYR 24 0.078 SIDE CHAIN 23 A ARG 43 0.086 SIDE CHAIN 26 A ARG 43 0.137 SIDE CHAIN 27 A ARG 43 0.101 SIDE CHAIN 30 A TYR 46 0.077 SIDE CHAIN 31 A TYR 39 0.090 SIDE CHAIN 32 A ARG 43 0.154 SIDE CHAIN 35 A ARG 43 0.087 SIDE CHAIN 1 3.38 0.50 120.30 123.68 A A A NE CZ NH1 ARG ARG ARG 43 43 43 N 2 3.03 0.50 120.30 123.33 A A A NE CZ NH1 ARG ARG ARG 43 43 43 N 6 -4.33 0.60 121.00 116.67 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 7 7.80 1.10 114.20 122.00 A A A CA CB SG CYS CYS CYS 8 8 8 N 8 -4.08 0.60 121.00 116.92 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 8 -5.41 0.60 121.00 115.59 A A A CB CG CD2 TYR TYR TYR 46 46 46 N 8 4.66 0.60 121.00 125.66 A A A CB CG CD1 TYR TYR TYR 46 46 46 N 9 -3.51 0.50 120.30 116.79 A A A NE CZ NH2 ARG ARG ARG 43 43 43 N 11 -5.51 0.60 121.00 115.49 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 11 4.77 0.60 121.00 125.77 A A A CB CG CD1 TYR TYR TYR 24 24 24 N 11 4.19 0.50 120.30 124.49 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 12 -3.91 0.60 121.00 117.09 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 12 3.21 0.50 120.30 123.51 A A A NE CZ NH1 ARG ARG ARG 43 43 43 N 12 3.49 0.50 120.30 123.79 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 13 3.09 0.50 120.30 123.39 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 15 -3.73 0.60 121.00 117.27 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 15 3.63 0.50 120.30 123.93 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 17 3.38 0.50 120.30 123.68 A A A NE CZ NH1 ARG ARG ARG 43 43 43 N 18 -3.51 0.50 120.30 116.79 A A A NE CZ NH2 ARG ARG ARG 43 43 43 N 19 -6.30 0.60 121.00 114.70 A A A CB CG CD2 TYR TYR TYR 31 31 31 N 19 5.31 0.60 121.00 126.31 A A A CB CG CD1 TYR TYR TYR 31 31 31 N 20 -5.09 0.60 121.00 115.91 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 20 4.12 0.60 121.00 125.12 A A A CB CG CD1 TYR TYR TYR 24 24 24 N 20 -4.34 0.60 121.00 116.66 A A A CB CG CD2 TYR TYR TYR 46 46 46 N 22 -6.63 0.60 121.00 114.37 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 22 5.47 0.60 121.00 126.47 A A A CB CG CD1 TYR TYR TYR 24 24 24 N 23 3.03 0.50 120.30 123.33 A A A NE CZ NH1 ARG ARG ARG 43 43 43 N 27 -4.33 0.60 121.00 116.67 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 28 7.80 1.10 114.20 122.00 A A A CA CB SG CYS CYS CYS 8 8 8 N 29 -4.08 0.60 121.00 116.92 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 29 -5.41 0.60 121.00 115.59 A A A CB CG CD2 TYR TYR TYR 46 46 46 N 29 4.66 0.60 121.00 125.66 A A A CB CG CD1 TYR TYR TYR 46 46 46 N 31 -5.51 0.60 121.00 115.49 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 31 4.77 0.60 121.00 125.77 A A A CB CG CD1 TYR TYR TYR 24 24 24 N 31 4.19 0.50 120.30 124.49 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 32 -3.91 0.60 121.00 117.09 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 32 3.21 0.50 120.30 123.51 A A A NE CZ NH1 ARG ARG ARG 43 43 43 N 32 3.49 0.50 120.30 123.79 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 33 3.09 0.50 120.30 123.39 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 35 -3.73 0.60 121.00 117.27 A A A CB CG CD2 TYR TYR TYR 24 24 24 N 35 3.63 0.50 120.30 123.93 A A A NE CZ NH1 ARG ARG ARG 47 47 47 N 1 A ASP 13 -99.72 35.33 1 A ASP 19 68.61 62.96 2 A CYS 8 -52.00 96.70 2 A HIS 18 73.62 30.21 2 A ASP 19 77.06 80.88 2 A ASP 29 80.73 16.82 3 A ASP 19 59.74 79.75 3 A GLU 53 -70.28 46.18 4 A ASP 19 58.04 81.06 4 A ASP 29 81.04 31.06 4 A GLU 53 -91.65 59.78 5 A SER 3 -130.40 -53.71 5 A CYS 8 -114.63 79.77 5 A ASP 19 56.22 74.54 5 A GLU 53 -103.94 72.15 6 A ASP 19 59.47 76.86 6 A ASP 29 84.25 9.08 6 A GLU 53 -100.32 63.71 7 A HIS 12 -150.14 -39.21 7 A ASP 19 51.45 74.53 8 A HIS 12 -15.88 72.91 8 A GLU 53 -102.83 64.55 9 A ASP 7 -160.90 97.74 9 A HIS 12 -16.66 93.87 10 A HIS 12 -150.02 34.78 10 A ILE 40 -129.55 -165.12 10 A GLU 53 -107.32 73.41 11 A ASP 19 33.08 72.28 11 A ASP 29 71.23 51.22 11 A ARG 43 -94.75 37.95 11 A CYS 44 71.28 31.72 12 A CYS 8 -57.74 107.50 12 A ASP 29 83.49 7.39 12 A GLU 53 -113.15 73.77 14 A SER 3 -99.92 55.04 14 A ASP 19 73.77 80.13 15 A SER 3 -130.40 -49.03 15 A HIS 12 -20.69 114.36 15 A GLU 53 -103.56 69.11 16 A PRO 9 -103.42 -64.26 16 A HIS 18 78.09 45.85 16 A GLU 53 -93.07 44.84 17 A ASP 13 -99.72 35.33 17 A ASP 19 68.61 62.96 18 A ASP 7 -160.90 97.74 18 A HIS 12 -16.66 93.87 19 A ASP 19 72.04 40.19 19 A ASP 29 84.48 10.22 19 A CYS 44 54.38 70.55 20 A SER 3 -120.72 -50.30 20 A ASP 19 53.54 75.95 21 A SER 3 -130.39 -52.51 21 A ASP 7 -122.06 -168.41 21 A CYS 8 -50.55 109.29 21 A GLU 53 -114.20 57.95 22 A SER 3 -120.26 -50.96 22 A PRO 9 -84.48 48.51 22 A ASP 19 64.66 75.18 23 A CYS 8 -52.00 96.70 23 A HIS 18 73.62 30.21 23 A ASP 19 77.06 80.88 23 A ASP 29 80.73 16.82 24 A ASP 19 59.74 79.75 24 A GLU 53 -70.28 46.18 25 A ASP 19 58.04 81.06 25 A ASP 29 81.04 31.06 25 A GLU 53 -91.65 59.78 26 A SER 3 -130.40 -53.71 26 A CYS 8 -114.63 79.77 26 A ASP 19 56.22 74.54 26 A GLU 53 -103.94 72.15 27 A ASP 19 59.47 76.86 27 A ASP 29 84.25 9.08 27 A GLU 53 -100.32 63.71 28 A HIS 12 -150.14 -39.21 28 A ASP 19 51.45 74.53 29 A HIS 12 -15.88 72.91 29 A GLU 53 -102.83 64.55 30 A HIS 12 -150.02 34.78 30 A ILE 40 -129.55 -165.12 30 A GLU 53 -107.32 73.41 31 A ASP 19 33.08 72.28 31 A ASP 29 71.23 51.22 31 A ARG 43 -94.75 37.95 31 A CYS 44 71.28 31.72 32 A CYS 8 -57.74 107.50 32 A ASP 29 83.49 7.39 32 A GLU 53 -113.15 73.77 34 A SER 3 -99.92 55.04 34 A ASP 19 73.77 80.13 35 A SER 3 -130.40 -49.03 35 A HIS 12 -20.69 114.36 35 A GLU 53 -103.56 69.11 36 A PRO 9 -103.42 -64.26 36 A HIS 18 78.09 45.85 36 A GLU 53 -93.07 44.84 Solution structure and dynamics of the EGF/TGF-alpha chimera T1E 1 N N disulf 2.028 A CYS 8 A SG CYS 8 1_555 A CYS 22 A SG CYS 22 1_555 disulf 2.029 A CYS 16 A SG CYS 16 1_555 A CYS 33 A SG CYS 33 1_555 disulf 2.028 A CYS 35 A SG CYS 35 1_555 A CYS 44 A SG CYS 44 1_555 HORMONE/GROWTH FACTOR chimera, EGF, TGF-alpha, ErbB1, ErbB3, HORMONE-GROWTH FACTOR COMPLEX TGFA_HUMAN UNP 1 40 P01135 VVSHFND EGF_HUMAN UNP 1 976 P01133 CPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDLKWWEL 40 46 1P9J 1 7 P01135 A 1 1 7 976 1022 1P9J 8 54 P01133 A 2 8 54 2 2 anti-parallel anti-parallel A VAL 21 A VAL 21 A ILE 25 A ILE 25 A LYS 30 A LYS 30 A ASN 34 A ASN 34 A TYR 39 A TYR 39 A ILE 40 A ILE 40 A TYR 46 A TYR 46 A ARG 47 A ARG 47