1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Huang, R.H. Xiang, Y. Tu, G.Z. Zhang, Y. Wang, D.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C5 H7 N O3 129.114 n PYROGLUTAMIC ACID L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 43 6005 6012 10.1021/bi036263y 15147184 Solution Structure of Eucommia Antifungal Peptide: A Novel Structural Model Distinct with a Five-Disulfide Motif. 2004 NE FEBS Lett. FEBLAL 0165 0014-5793 521 87 90 10.1016/S0014-5793(02)02829-6 Two novel antifungal peptides distinct with a five-disulfide motif fron the bark of Eucommia ulmoides Oliver 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 EAFP2 4172.807 Eucommia Antifungal peptide 2 1 nat polymer no yes (PCA)TCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG QTCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Eucommia sample 4392 Eucommia ulmoides Bark entity_poly pdbx_nmr_software pdbx_struct_assembly pdbx_struct_mod_residue pdbx_struct_oper_list struct_conn repository Initial release Version format compliance Version format compliance Data collection Derived calculations Polymer sequence 1 0 2004-05-25 1 1 2008-04-29 1 2 2011-07-13 2 0 2019-12-25 _entity_poly.pdbx_seq_one_letter_code_can _pdbx_nmr_software.name _pdbx_struct_mod_residue.parent_comp_id _struct_conn.pdbx_leaving_atom_flag The chemical shifts of the hydrogens Helix determination method: Author determined Sheet determination method: Author determined RCSB Y RCSB 2003-05-13 REL REL This structure was determined using standard 2D homonuclear techniques structures with the least restraint violations,structures with the lowest energy 100 21 DQF-COSY 2D TOCSY 2D NOESY 2D TOCSY 2D NOESY DQF-COSY 2D NOESY 2D TOCSY 20 mM Phospate Buffer 5.6 ambient 300 K 20 mM Phospate Buffer 5.6 ambient 300 K 20 mM Phospate Buffer 5.6 ambient 290 K the structures are based on a total of 630 restraints, 594 are NOE-derived distance constraints, 16 dihedral angle restraints,20 distance restraints from hydrogen bonds. torsion angle dynamics, simulated annealing 1 fewest violations,lowest energy 6mM antifungal peptide(EAFP2); 20 mM phosphate buffer,0.01 mM EDTA 90% H2O/10% D2O 6mM antifungal peptide(EAFP2); 20 mM phosphate buffer, 0.01 mMEDTA 100% D2O Bruker Corp. collection XwinNMR 3.1 Goddard, T.D. and Kneller, D.G. data analysis Sparky 3.105 Brunger, A.T. etc. structure solution CNS 1.1 Brunger, A.T. etc. refinement CNS 1.1 500 Bruker DMX PCA 1 n 1 PCA 1 A THR 2 n 2 THR 2 A CYS 3 n 3 CYS 3 A ALA 4 n 4 ALA 4 A SER 5 n 5 SER 5 A ARG 6 n 6 ARG 6 A CYS 7 n 7 CYS 7 A PRO 8 n 8 PRO 8 A ARG 9 n 9 ARG 9 A PRO 10 n 10 PRO 10 A CYS 11 n 11 CYS 11 A ASN 12 n 12 ASN 12 A ALA 13 n 13 ALA 13 A GLY 14 n 14 GLY 14 A LEU 15 n 15 LEU 15 A CYS 16 n 16 CYS 16 A CYS 17 n 17 CYS 17 A SER 18 n 18 SER 18 A ILE 19 n 19 ILE 19 A TYR 20 n 20 TYR 20 A GLY 21 n 21 GLY 21 A TYR 22 n 22 TYR 22 A CYS 23 n 23 CYS 23 A GLY 24 n 24 GLY 24 A SER 25 n 25 SER 25 A GLY 26 n 26 GLY 26 A ALA 27 n 27 ALA 27 A ALA 28 n 28 ALA 28 A TYR 29 n 29 TYR 29 A CYS 30 n 30 CYS 30 A GLY 31 n 31 GLY 31 A ALA 32 n 32 ALA 32 A GLY 33 n 33 GLY 33 A ASN 34 n 34 ASN 34 A CYS 35 n 35 CYS 35 A ARG 36 n 36 ARG 36 A CYS 37 n 37 CYS 37 A GLN 38 n 38 GLN 38 A CYS 39 n 39 CYS 39 A ARG 40 n 40 ARG 40 A GLY 41 n 41 GLY 41 A author_defined_assembly 1 monomeric A PCA 1 PYROGLUTAMIC ACID A PCA 1 GLN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 18 A N SER 18 A O TYR 22 A O TYR 22 A N CYS 17 A N CYS 17 A O CYS 37 A O CYS 37 1 A THR 2 -148.51 40.21 1 A ARG 9 -115.99 70.00 2 A THR 2 -148.44 46.07 3 A THR 2 -152.77 53.47 3 A ASN 12 -63.93 -173.59 3 A ASN 34 -148.78 28.32 4 A THR 2 -151.58 43.57 4 A ASN 12 -63.45 -170.64 4 A CYS 30 -150.65 30.52 4 A ASN 34 -141.73 33.83 6 A THR 2 -153.25 35.88 6 A ASN 12 -65.39 -170.42 6 A ASN 34 -160.06 39.71 6 A CYS 39 -131.20 -44.98 7 A ASN 12 -59.48 -174.60 8 A THR 2 -148.79 34.31 8 A ASN 34 -153.98 43.96 9 A ASN 34 -152.79 48.45 9 A ARG 40 -147.71 30.70 10 A THR 2 -141.39 45.28 10 A CYS 30 -160.08 30.20 11 A THR 2 -158.80 45.11 11 A ALA 32 -119.98 76.16 12 A THR 2 -148.63 44.11 12 A ASN 12 -61.74 -171.44 12 A ASN 34 -143.28 23.48 12 A ARG 40 -143.69 30.93 15 A ASN 12 -67.83 -171.22 17 A ASN 12 -69.18 -169.69 17 A CYS 30 -152.65 35.89 19 A THR 2 -144.32 39.90 19 A ASN 12 -73.74 -169.84 20 A PRO 8 -97.12 44.21 20 A ARG 9 -143.42 51.99 20 A ASN 12 -59.63 -171.09 20 A ASN 34 -160.10 32.94 20 A ARG 40 -162.16 30.50 21 A THR 2 -140.44 48.40 21 A ASN 12 -63.90 -177.31 21 A ASN 34 -159.91 30.58 Antifungal peptide from the Eucommia ulmoides Oliver (EAFP2) The Solution Structure of Antifungal Peptide Distinct With a Five-disulfide Motif from Eucommia ulmoides Oliver 1 N N A CYS 3 A CYS 3 HELX_P A ARG 6 A ARG 6 5 1 4 A GLY 26 A GLY 26 HELX_P A CYS 30 A CYS 30 1 2 5 disulf 2.030 A CYS 3 A SG CYS 3 1_555 A CYS 17 A SG CYS 17 1_555 disulf 2.030 A CYS 7 A SG CYS 7 1_555 A CYS 37 A SG CYS 37 1_555 disulf 2.030 A CYS 11 A SG CYS 11 1_555 A CYS 23 A SG CYS 23 1_555 disulf 2.030 A CYS 16 A SG CYS 16 1_555 A CYS 30 A SG CYS 30 1_555 disulf 2.030 A CYS 35 A SG CYS 35 1_555 A CYS 39 A SG CYS 39 1_555 covale 1.329 both A PCA 1 A C PCA 1 1_555 A THR 2 A N THR 2 1_555 ANTIFUNGAL PROTEIN Antifungal peptide, Chitin-binding peptide, Disulfide stabilized motif, ANTIFUNGAL PROTEIN A CYS 7 A CYS 7 1 A PRO 8 A PRO 8 0.03 A CYS 7 A CYS 7 2 A PRO 8 A PRO 8 0.16 A CYS 7 A CYS 7 3 A PRO 8 A PRO 8 0.22 A CYS 7 A CYS 7 4 A PRO 8 A PRO 8 0.14 A CYS 7 A CYS 7 5 A PRO 8 A PRO 8 0.28 A CYS 7 A CYS 7 6 A PRO 8 A PRO 8 0.08 A CYS 7 A CYS 7 7 A PRO 8 A PRO 8 0.16 A CYS 7 A CYS 7 8 A PRO 8 A PRO 8 0.25 A CYS 7 A CYS 7 9 A PRO 8 A PRO 8 0.11 A CYS 7 A CYS 7 10 A PRO 8 A PRO 8 0.45 A CYS 7 A CYS 7 11 A PRO 8 A PRO 8 0.13 A CYS 7 A CYS 7 12 A PRO 8 A PRO 8 0.23 A CYS 7 A CYS 7 13 A PRO 8 A PRO 8 0.32 A CYS 7 A CYS 7 14 A PRO 8 A PRO 8 0.40 A CYS 7 A CYS 7 15 A PRO 8 A PRO 8 0.41 A CYS 7 A CYS 7 16 A PRO 8 A PRO 8 0.28 A CYS 7 A CYS 7 17 A PRO 8 A PRO 8 0.51 A CYS 7 A CYS 7 18 A PRO 8 A PRO 8 0.44 A CYS 7 A CYS 7 19 A PRO 8 A PRO 8 0.15 A CYS 7 A CYS 7 20 A PRO 8 A PRO 8 0.73 A CYS 7 A CYS 7 21 A PRO 8 A PRO 8 0.43 EAP2_EUCUL UNP 1 1 P83597 QTCASRCPRPCNAGLCCSIYGYCGSGAAYCGAGNCRCQCRG 1 41 1P9Z 1 41 P83597 A 1 1 41 3 anti-parallel anti-parallel A TYR 22 A TYR 22 A GLY 24 A GLY 24 A CYS 16 A CYS 16 A SER 18 A SER 18 A ARG 36 A ARG 36 A CYS 37 A CYS 37 1 P 1