0.015228
0.000000
0.004627
0.000000
0.017627
0.000000
0.000000
0.000000
0.019426
0.00000
0.00000
0.00000
Raumann, B.E.
Rould, M.A.
Pabo, C.O.
Sauer, R.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
106.90
90.00
65.670
56.730
53.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
N
C
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
Y
90
N
C
N
91
N
N
Y
92
N
N
Y
93
N
C
Y
94
N
N
Y
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
N
C
N
121
R
C
N
122
N
N
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
C
N
150
R
C
N
151
N
O
N
152
S
C
N
153
N
O
N
154
N
C
N
155
R
C
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
C
N
164
N
N
N
165
N
N
Y
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
C
N
187
R
C
N
188
N
O
N
189
S
C
N
190
N
O
N
191
N
C
N
192
R
C
N
193
N
N
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
S
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
N
N
314
S
C
N
315
N
C
N
316
N
O
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
N
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
N
343
N
C
N
344
N
S
N
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
N
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
doub
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
Y
416
N
doub
Y
417
N
sing
Y
418
N
sing
N
419
N
sing
Y
420
N
doub
Y
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
sing
Y
425
N
doub
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
Y
444
N
doub
Y
445
N
sing
Y
446
N
sing
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
doub
N
451
N
sing
Y
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
doub
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
UK
Nature
NATUAS
0006
0028-0836
367
754
757
10.1038/367754a0
8107872
DNA recognition by beta-sheets in the Arc repressor-operator crystal structure.
1994
10.2210/pdb1par/pdb
pdb_00001par
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
IMAGE PLATE
RIGAKU RAXIS IIC
x-ray
1
1.0
6756.387
DNA (5'-D(*TP*AP*TP*AP*GP*TP*AP*GP*AP*GP*TP*GP*CP*TP*TP*CP*T P*AP*TP*CP*AP*T)- 3')
1
syn
polymer
6743.404
DNA (5'-D(*AP*AP*TP*GP*AP*TP*AP*GP*AP*AP*GP*CP*AP*CP*TP*CP*T P*AP*CP*TP*AP*T)- 3')
1
syn
polymer
6238.272
PROTEIN (ARC REPRESSOR)
4
nat
polymer
18.015
water
45
nat
water
no
no
(DT)(DA)(DT)(DA)(DG)(DT)(DA)(DG)(DA)(DG)(DT)(DG)(DC)(DT)(DT)(DC)(DT)(DA)(DT)(DC)
(DA)(DT)
TATAGTAGAGTGCTTCTATCAT
E
polydeoxyribonucleotide
no
no
(DA)(DA)(DT)(DG)(DA)(DT)(DA)(DG)(DA)(DA)(DG)(DC)(DA)(DC)(DT)(DC)(DT)(DA)(DC)(DT)
(DA)(DT)
AATGATAGAAGCACTCTACTAT
F
polydeoxyribonucleotide
no
no
MKGMSKMPQFNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA
MKGMSKMPQFNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA
A,B,C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
P22-like viruses
sample
10754
Enterobacteria phage P22
2.49
50.67
VAPOR DIFFUSION, HANGING DROP
7.40
pH 7.40, VAPOR DIFFUSION, HANGING DROP
WATER
1
BIS-TRIS-PROPANE
1
NA AZIDE
1
WATER
2
PEG 400
2
MGCL2
2
3.856
1
20
E
2
F
22
-6.269
E_DA2:DT22_F
1
-12.965
0.222
-0.029
-0.244
7.374
1
20
E
3
F
21
9.569
E_DT3:DA21_F
2
-7.225
-0.194
0.137
-0.356
-7.716
1
20
E
4
F
20
3.472
E_DA4:DT20_F
3
-17.653
-0.719
-0.508
-0.375
-3.258
1
19
E
5
F
19
4.834
E_DG5:DC19_F
4
-6.661
0.407
0.243
0.090
0.882
1
20
E
6
F
18
-2.564
E_DT6:DA18_F
5
-11.799
-0.137
-0.567
-0.061
-8.740
1
20
E
7
F
17
4.702
E_DA7:DT17_F
6
-9.588
0.478
0.171
-0.237
-1.378
1
19
E
8
F
16
-2.751
E_DG8:DC16_F
7
-1.036
-0.011
-0.268
-0.203
6.746
1
20
E
9
F
15
-3.624
E_DA9:DT15_F
8
-15.690
0.771
-0.263
-0.364
6.052
1
19
E
10
F
14
0.129
E_DG10:DC14_F
9
-15.789
-0.359
0.733
-0.285
6.447
1
20
E
11
F
13
-7.575
E_DT11:DA13_F
10
-16.712
-0.164
-0.081
-0.185
-2.607
1
19
E
12
F
12
7.027
E_DG12:DC12_F
11
-3.634
-0.344
0.136
0.111
-2.761
1
19
E
13
F
11
-2.966
E_DC13:DG11_F
12
-16.623
-0.042
0.223
-0.442
-0.885
1
20
E
14
F
10
-12.803
E_DT14:DA10_F
13
-23.823
-0.350
-0.080
-0.364
-5.430
1
20
E
15
F
9
-4.759
E_DT15:DA9_F
14
-17.047
-0.068
-0.419
0.034
-6.813
1
19
E
16
F
8
-4.254
E_DC16:DG8_F
15
-4.020
-1.022
-0.340
-0.162
6.339
1
20
E
17
F
7
-0.047
E_DT17:DA7_F
16
-3.859
-0.148
0.039
-0.333
10.655
1
20
E
18
F
6
1.878
E_DA18:DT6_F
17
-6.941
-0.257
0.386
-0.055
4.253
1
E
19
F
5
9.900
E_DT19:DA5_F
18
-12.994
1.209
0.338
0.012
9.960
1
E
20
F
4
15.764
E_DC20:DG4_F
19
-14.047
0.077
0.124
0.328
-7.789
1
20
E
21
F
3
6.527
E_DA21:DT3_F
20
-15.981
0.620
0.124
-0.327
-9.215
1
E
22
F
2
13.189
E_DT22:DA2_F
21
-14.636
1.148
0.843
-0.173
3.104
26.282
E
E
2
3
6.247
F
F
22
21
3.246
2.835
1.104
-0.965
EE_DA2DT3:DA21DT22_FF
1
-0.515
1.135
26.126
-2.865
-2.563
2.464
30.686
E
E
3
4
33.488
F
F
21
20
3.655
16.759
-0.527
-1.018
EE_DT3DA4:DT20DA21_FF
2
3.071
-6.137
25.616
-5.302
1.615
3.009
44.085
E
E
4
5
6.866
F
F
20
19
3.077
5.103
-0.431
-0.631
EE_DA4DG5:DC19DT20_FF
3
-9.938
13.372
42.715
-1.294
-0.310
2.929
25.580
E
E
5
6
3.303
F
F
19
18
3.350
1.434
-0.502
-1.008
EE_DG5DT6:DA18DC19_FF
4
8.673
-19.983
24.046
-2.681
3.573
3.573
46.869
E
E
6
7
-13.021
F
F
18
17
3.835
-10.269
0.355
0.652
EE_DT6DA7:DT17DA18_FF
5
-4.166
5.282
45.612
1.797
-0.843
2.700
27.372
E
E
7
8
37.408
F
F
17
16
3.405
16.475
-0.858
0.175
EE_DA7DG8:DC16DT17_FF
6
3.491
-7.926
21.656
-3.908
2.720
3.182
33.484
E
E
8
9
10.761
F
F
16
15
3.268
6.159
0.192
-0.019
EE_DG8DA9:DT15DC16_FF
7
-2.995
5.234
32.796
-1.044
-0.825
3.305
28.924
E
E
9
10
1.071
F
F
15
14
3.310
0.530
-0.383
-0.360
EE_DA9DG10:DC14DT15_FF
8
-6.599
13.325
28.171
-0.841
-0.732
3.151
33.875
E
E
10
11
5.407
F
F
14
13
3.403
3.120
-0.587
-0.251
EE_DG10DT11:DA13DC14_FF
9
7.748
-13.429
32.858
-0.942
2.276
3.646
38.182
E
E
11
12
-2.517
F
F
13
12
3.576
-1.645
1.925
0.982
EE_DT11DG12:DC12DA13_FF
10
2.497
-3.821
38.070
1.730
-2.595
3.307
41.157
E
E
12
13
-11.973
F
F
12
11
3.473
-8.361
-1.255
0.775
EE_DG12DC13:DG11DC12_FF
11
-1.850
2.650
40.294
2.052
1.575
3.167
31.971
E
E
13
14
13.578
F
F
11
10
3.313
7.411
-0.454
-0.346
EE_DC13DT14:DA10DG11_FF
12
-1.544
2.829
31.084
-1.977
0.543
3.694
37.592
E
E
14
15
1.872
F
F
10
9
3.571
1.202
1.143
-0.059
EE_DT14DT15:DA9DA10_FF
13
5.582
-8.693
37.172
-0.267
-0.961
3.171
26.448
E
E
15
16
22.087
F
F
9
8
3.451
9.868
-0.429
-0.127
EE_DT15DC16:DG8DA9_FF
14
-0.520
1.164
24.563
-3.033
0.792
3.134
30.609
E
E
16
17
20.797
F
F
8
7
3.254
10.754
1.003
0.288
EE_DC16DT17:DA7DG8_FF
15
-0.627
1.212
28.693
-1.601
-2.026
3.348
41.201
E
E
17
18
-18.787
F
F
7
6
3.601
-13.012
0.351
0.247
EE_DT17DA18:DT6DA7_FF
16
-0.899
1.298
39.168
1.886
-0.604
3.299
34.772
E
E
18
19
13.720
F
F
6
5
3.543
8.124
0.930
-0.857
EE_DA18DT19:DA5DT6_FF
17
1.846
-3.118
33.789
-2.750
-1.257
2.911
32.826
E
E
19
20
13.538
F
F
5
4
3.026
7.577
0.438
-0.277
EE_DT19DC20:DG4DA5_FF
18
2.730
-4.878
31.849
-1.688
-0.344
3.561
33.735
E
E
20
21
12.266
F
F
4
3
3.753
7.065
-0.428
-0.645
EE_DC20DA21:DT3DG4_FF
19
-1.895
3.291
32.955
-2.409
0.389
3.431
31.903
E
E
21
22
1.150
F
F
3
2
3.450
0.630
-0.281
-1.303
EE_DA21DT22:DA2DT3_FF
20
-4.433
8.090
31.596
-2.491
-0.340
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1994-07-31
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
BNL
1994-03-22
REL
HOH
water
HOH
601
4
HOH
HOH
601
E
HOH
603
4
HOH
HOH
603
E
HOH
608
4
HOH
HOH
608
E
HOH
609
4
HOH
HOH
609
E
HOH
636
4
HOH
HOH
636
E
HOH
639
4
HOH
HOH
639
E
HOH
641
4
HOH
HOH
641
E
HOH
605
4
HOH
HOH
605
F
HOH
606
4
HOH
HOH
606
F
HOH
610
4
HOH
HOH
610
F
HOH
611
4
HOH
HOH
611
F
HOH
612
4
HOH
HOH
612
F
HOH
615
4
HOH
HOH
615
F
HOH
616
4
HOH
HOH
616
F
HOH
622
4
HOH
HOH
622
F
HOH
623
4
HOH
HOH
623
F
HOH
640
4
HOH
HOH
640
F
HOH
602
4
HOH
HOH
602
A
HOH
604
4
HOH
HOH
604
A
HOH
607
4
HOH
HOH
607
A
HOH
626
4
HOH
HOH
626
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
632
4
HOH
HOH
632
A
HOH
637
4
HOH
HOH
637
A
HOH
638
4
HOH
HOH
638
A
HOH
613
4
HOH
HOH
613
B
HOH
625
4
HOH
HOH
625
B
HOH
629
4
HOH
HOH
629
B
HOH
630
4
HOH
HOH
630
B
HOH
642
4
HOH
HOH
642
B
HOH
643
4
HOH
HOH
643
B
HOH
644
4
HOH
HOH
644
B
HOH
619
4
HOH
HOH
619
C
HOH
621
4
HOH
HOH
621
C
HOH
634
4
HOH
HOH
634
C
HOH
635
4
HOH
HOH
635
C
HOH
614
4
HOH
HOH
614
D
HOH
617
4
HOH
HOH
617
D
HOH
618
4
HOH
HOH
618
D
HOH
620
4
HOH
HOH
620
D
HOH
624
4
HOH
HOH
624
D
HOH
631
4
HOH
HOH
631
D
HOH
633
4
HOH
HOH
633
D
HOH
645
4
HOH
HOH
645
D
T
1
n
1
DT
1
E
A
2
n
2
DA
2
E
T
3
n
3
DT
3
E
A
4
n
4
DA
4
E
G
5
n
5
DG
5
E
T
6
n
6
DT
6
E
A
7
n
7
DA
7
E
G
8
n
8
DG
8
E
A
9
n
9
DA
9
E
G
10
n
10
DG
10
E
T
11
n
11
DT
11
E
G
12
n
12
DG
12
E
C
13
n
13
DC
13
E
T
14
n
14
DT
14
E
T
15
n
15
DT
15
E
C
16
n
16
DC
16
E
T
17
n
17
DT
17
E
A
18
n
18
DA
18
E
T
19
n
19
DT
19
E
C
20
n
20
DC
20
E
A
21
n
21
DA
21
E
T
22
n
22
DT
22
E
A
1
n
1
DA
1
F
A
2
n
2
DA
2
F
T
3
n
3
DT
3
F
G
4
n
4
DG
4
F
A
5
n
5
DA
5
F
T
6
n
6
DT
6
F
A
7
n
7
DA
7
F
G
8
n
8
DG
8
F
A
9
n
9
DA
9
F
A
10
n
10
DA
10
F
G
11
n
11
DG
11
F
C
12
n
12
DC
12
F
A
13
n
13
DA
13
F
C
14
n
14
DC
14
F
T
15
n
15
DT
15
F
C
16
n
16
DC
16
F
T
17
n
17
DT
17
F
A
18
n
18
DA
18
F
C
19
n
19
DC
19
F
T
20
n
20
DT
20
F
A
21
n
21
DA
21
F
T
22
n
22
DT
22
F
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
GLY
3
n
3
GLY
3
A
MET
4
n
4
MET
4
A
SER
5
n
5
SER
5
A
LYS
6
n
6
LYS
6
A
MET
7
n
7
MET
7
A
PRO
8
n
8
PRO
8
A
GLN
9
n
9
GLN
9
A
PHE
10
n
10
PHE
10
A
ASN
11
n
11
ASN
11
A
LEU
12
n
12
LEU
12
A
ARG
13
n
13
ARG
13
A
TRP
14
n
14
TRP
14
A
PRO
15
n
15
PRO
15
A
ARG
16
n
16
ARG
16
A
GLU
17
n
17
GLU
17
A
VAL
18
n
18
VAL
18
A
LEU
19
n
19
LEU
19
A
ASP
20
n
20
ASP
20
A
LEU
21
n
21
LEU
21
A
VAL
22
n
22
VAL
22
A
ARG
23
n
23
ARG
23
A
LYS
24
n
24
LYS
24
A
VAL
25
n
25
VAL
25
A
ALA
26
n
26
ALA
26
A
GLU
27
n
27
GLU
27
A
GLU
28
n
28
GLU
28
A
ASN
29
n
29
ASN
29
A
GLY
30
n
30
GLY
30
A
ARG
31
n
31
ARG
31
A
SER
32
n
32
SER
32
A
VAL
33
n
33
VAL
33
A
ASN
34
n
34
ASN
34
A
SER
35
n
35
SER
35
A
GLU
36
n
36
GLU
36
A
ILE
37
n
37
ILE
37
A
TYR
38
n
38
TYR
38
A
GLN
39
n
39
GLN
39
A
ARG
40
n
40
ARG
40
A
VAL
41
n
41
VAL
41
A
MET
42
n
42
MET
42
A
GLU
43
n
43
GLU
43
A
SER
44
n
44
SER
44
A
PHE
45
n
45
PHE
45
A
LYS
46
n
46
LYS
46
A
LYS
47
n
47
LYS
47
A
GLU
48
n
48
GLU
48
A
GLY
49
n
49
GLY
49
A
ARG
50
n
50
ARG
50
A
ILE
51
n
51
ILE
51
A
GLY
52
n
52
GLY
52
A
n
53
53
A
MET
1
n
1
MET
1
B
LYS
2
n
2
LYS
2
B
GLY
3
n
3
GLY
3
B
MET
4
n
4
MET
4
B
SER
5
n
5
SER
5
B
LYS
6
n
6
LYS
6
B
MET
7
n
7
MET
7
B
PRO
8
n
8
PRO
8
B
GLN
9
n
9
GLN
9
B
PHE
10
n
10
PHE
10
B
ASN
11
n
11
ASN
11
B
LEU
12
n
12
LEU
12
B
ARG
13
n
13
ARG
13
B
TRP
14
n
14
TRP
14
B
PRO
15
n
15
PRO
15
B
ARG
16
n
16
ARG
16
B
GLU
17
n
17
GLU
17
B
VAL
18
n
18
VAL
18
B
LEU
19
n
19
LEU
19
B
ASP
20
n
20
ASP
20
B
LEU
21
n
21
LEU
21
B
VAL
22
n
22
VAL
22
B
ARG
23
n
23
ARG
23
B
LYS
24
n
24
LYS
24
B
VAL
25
n
25
VAL
25
B
ALA
26
n
26
ALA
26
B
GLU
27
n
27
GLU
27
B
GLU
28
n
28
GLU
28
B
ASN
29
n
29
ASN
29
B
GLY
30
n
30
GLY
30
B
ARG
31
n
31
ARG
31
B
SER
32
n
32
SER
32
B
VAL
33
n
33
VAL
33
B
ASN
34
n
34
ASN
34
B
SER
35
n
35
SER
35
B
GLU
36
n
36
GLU
36
B
ILE
37
n
37
ILE
37
B
TYR
38
n
38
TYR
38
B
GLN
39
n
39
GLN
39
B
ARG
40
n
40
ARG
40
B
VAL
41
n
41
VAL
41
B
MET
42
n
42
MET
42
B
GLU
43
n
43
GLU
43
B
SER
44
n
44
SER
44
B
PHE
45
n
45
PHE
45
B
LYS
46
n
46
LYS
46
B
LYS
47
n
47
LYS
47
B
GLU
48
n
48
GLU
48
B
GLY
49
n
49
GLY
49
B
ARG
50
n
50
ARG
50
B
ILE
51
n
51
ILE
51
B
GLY
52
n
52
GLY
52
B
ALA
53
n
53
ALA
53
B
MET
1
n
1
MET
1
C
LYS
2
n
2
LYS
2
C
GLY
3
n
3
GLY
3
C
MET
4
n
4
MET
4
C
SER
5
n
5
SER
5
C
LYS
6
n
6
LYS
6
C
MET
7
n
7
MET
7
C
PRO
8
n
8
PRO
8
C
GLN
9
n
9
GLN
9
C
PHE
10
n
10
PHE
10
C
ASN
11
n
11
ASN
11
C
LEU
12
n
12
LEU
12
C
ARG
13
n
13
ARG
13
C
TRP
14
n
14
TRP
14
C
PRO
15
n
15
PRO
15
C
ARG
16
n
16
ARG
16
C
GLU
17
n
17
GLU
17
C
VAL
18
n
18
VAL
18
C
LEU
19
n
19
LEU
19
C
ASP
20
n
20
ASP
20
C
LEU
21
n
21
LEU
21
C
VAL
22
n
22
VAL
22
C
ARG
23
n
23
ARG
23
C
LYS
24
n
24
LYS
24
C
VAL
25
n
25
VAL
25
C
ALA
26
n
26
ALA
26
C
GLU
27
n
27
GLU
27
C
GLU
28
n
28
GLU
28
C
ASN
29
n
29
ASN
29
C
GLY
30
n
30
GLY
30
C
ARG
31
n
31
ARG
31
C
SER
32
n
32
SER
32
C
VAL
33
n
33
VAL
33
C
ASN
34
n
34
ASN
34
C
SER
35
n
35
SER
35
C
GLU
36
n
36
GLU
36
C
ILE
37
n
37
ILE
37
C
TYR
38
n
38
TYR
38
C
GLN
39
n
39
GLN
39
C
ARG
40
n
40
ARG
40
C
VAL
41
n
41
VAL
41
C
MET
42
n
42
MET
42
C
GLU
43
n
43
GLU
43
C
SER
44
n
44
SER
44
C
PHE
45
n
45
PHE
45
C
LYS
46
n
46
LYS
46
C
LYS
47
n
47
LYS
47
C
GLU
48
n
48
GLU
48
C
GLY
49
n
49
GLY
49
C
ARG
50
n
50
ARG
50
C
n
51
51
C
n
52
52
C
n
53
53
C
MET
1
n
1
MET
1
D
LYS
2
n
2
LYS
2
D
GLY
3
n
3
GLY
3
D
MET
4
n
4
MET
4
D
SER
5
n
5
SER
5
D
LYS
6
n
6
LYS
6
D
MET
7
n
7
MET
7
D
PRO
8
n
8
PRO
8
D
GLN
9
n
9
GLN
9
D
PHE
10
n
10
PHE
10
D
ASN
11
n
11
ASN
11
D
LEU
12
n
12
LEU
12
D
ARG
13
n
13
ARG
13
D
TRP
14
n
14
TRP
14
D
PRO
15
n
15
PRO
15
D
ARG
16
n
16
ARG
16
D
GLU
17
n
17
GLU
17
D
VAL
18
n
18
VAL
18
D
LEU
19
n
19
LEU
19
D
ASP
20
n
20
ASP
20
D
LEU
21
n
21
LEU
21
D
VAL
22
n
22
VAL
22
D
ARG
23
n
23
ARG
23
D
LYS
24
n
24
LYS
24
D
VAL
25
n
25
VAL
25
D
ALA
26
n
26
ALA
26
D
GLU
27
n
27
GLU
27
D
GLU
28
n
28
GLU
28
D
ASN
29
n
29
ASN
29
D
GLY
30
n
30
GLY
30
D
ARG
31
n
31
ARG
31
D
SER
32
n
32
SER
32
D
VAL
33
n
33
VAL
33
D
ASN
34
n
34
ASN
34
D
SER
35
n
35
SER
35
D
GLU
36
n
36
GLU
36
D
ILE
37
n
37
ILE
37
D
TYR
38
n
38
TYR
38
D
GLN
39
n
39
GLN
39
D
ARG
40
n
40
ARG
40
D
VAL
41
n
41
VAL
41
D
MET
42
n
42
MET
42
D
GLU
43
n
43
GLU
43
D
SER
44
n
44
SER
44
D
PHE
45
n
45
PHE
45
D
LYS
46
n
46
LYS
46
D
LYS
47
n
47
LYS
47
D
GLU
48
n
48
GLU
48
D
GLY
49
n
49
GLY
49
D
ARG
50
n
50
ARG
50
D
ILE
51
n
51
ILE
51
D
GLY
52
n
52
GLY
52
D
ALA
53
n
53
ALA
53
D
author_defined_assembly
6
hexameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
12
C
N
LEU
12
B
O
PHE
10
D
O
PHE
10
C
N
LEU
12
E
N
LEU
12
D
O
PHE
10
F
O
PHE
10
1
C
CG
GLU
48
E
CG
GLU
48
1
Y
1
C
CD
GLU
48
E
CD
GLU
48
1
Y
1
C
OE1
GLU
48
E
OE1
GLU
48
1
Y
1
C
OE2
GLU
48
E
OE2
GLU
48
1
Y
1
A
ALA
53
C
ALA
53
1
Y
1
C
ILE
51
E
ILE
51
1
Y
1
C
GLY
52
E
GLY
52
1
Y
1
C
ALA
53
E
ALA
53
1
Y
1
E
E
N7
O
DA
HOH
2
636
2.08
1
D
D
NH2
O
ARG
HOH
16
620
2.11
1
A
A
NH1
O
ARG
HOH
23
602
2.19
1
E
DA
21
0.070
SIDE CHAIN
1
B
GLU
48
0.093
SIDE CHAIN
1
C
GLN
9
0.072
SIDE CHAIN
1
-5.41
0.80
102.40
96.99
E
E
E
C3'
C2'
C1'
DT
DT
DT
1
1
1
N
1
3.25
0.30
108.30
111.55
E
E
E
O4'
C1'
N1
DT
DT
DT
1
1
1
N
1
16.49
1.20
119.70
136.19
E
E
E
C3'
O3'
P
DT
DT
DA
1
1
2
Y
1
2.11
0.30
108.30
110.41
E
E
E
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
8.27
1.20
119.70
127.97
E
E
E
C3'
O3'
P
DT
DT
DA
6
6
7
Y
1
2.58
0.30
108.30
110.88
E
E
E
O4'
C1'
N9
DA
DA
DA
7
7
7
N
1
7.46
1.20
119.70
127.16
E
E
E
C3'
O3'
P
DA
DA
DG
7
7
8
Y
1
3.06
0.30
108.30
111.36
E
E
E
O4'
C1'
N9
DA
DA
DA
9
9
9
N
1
3.54
0.30
108.30
111.84
E
E
E
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
-8.96
1.00
110.10
101.14
E
E
E
C1'
O4'
C4'
DT
DT
DT
14
14
14
N
1
1.96
0.30
108.30
110.26
E
E
E
O4'
C1'
N1
DC
DC
DC
20
20
20
N
1
1.94
0.30
108.30
110.24
E
E
E
O4'
C1'
N1
DT
DT
DT
22
22
22
N
1
-5.92
0.40
104.50
98.58
F
F
F
O4'
C4'
C3'
DA
DA
DA
1
1
1
N
1
3.69
0.30
108.30
111.99
F
F
F
O4'
C1'
N9
DA
DA
DA
1
1
1
N
1
-8.39
1.00
110.10
101.71
F
F
F
C1'
O4'
C4'
DT
DT
DT
3
3
3
N
1
2.57
0.30
108.30
110.87
F
F
F
O4'
C1'
N9
DG
DG
DG
8
8
8
N
1
-7.06
1.00
110.10
103.04
F
F
F
C1'
O4'
C4'
DA
DA
DA
9
9
9
N
1
5.40
0.30
108.30
113.70
F
F
F
O4'
C1'
N9
DA
DA
DA
9
9
9
N
1
-6.40
1.00
110.10
103.70
F
F
F
C1'
O4'
C4'
DC
DC
DC
14
14
14
N
1
-6.50
1.00
110.10
103.60
F
F
F
C1'
O4'
C4'
DT
DT
DT
15
15
15
N
1
2.96
0.30
108.30
111.26
F
F
F
O4'
C1'
N1
DT
DT
DT
17
17
17
N
1
2.45
0.30
108.30
110.75
F
F
F
O4'
C1'
N9
DA
DA
DA
18
18
18
N
1
-3.92
0.40
104.50
100.58
F
F
F
O4'
C4'
C3'
DC
DC
DC
19
19
19
N
1
3.12
0.30
108.30
111.42
F
F
F
O4'
C1'
N1
DC
DC
DC
19
19
19
N
1
13.04
1.20
119.70
132.74
F
F
F
C3'
O3'
P
DA
DA
DT
21
21
22
Y
1
2.73
0.30
108.30
111.03
F
F
F
O4'
C1'
N1
DT
DT
DT
22
22
22
N
1
-6.47
0.90
118.30
111.83
C
C
C
CB
CG
OD2
ASP
ASP
ASP
20
20
20
N
1
3.02
0.50
120.30
123.32
C
C
C
NE
CZ
NH1
ARG
ARG
ARG
31
31
31
N
1
5.66
0.90
118.30
123.96
D
D
D
CB
CG
OD1
ASP
ASP
ASP
20
20
20
N
1
-6.90
0.90
118.30
111.40
D
D
D
CB
CG
OD2
ASP
ASP
ASP
20
20
20
N
1
F
F
O3'
C3'
DA
DA
5
5
-0.052
0.006
1.419
1.367
N
1
F
F
O3'
C3'
DT
DT
15
15
-0.051
0.006
1.419
1.368
N
1
A
A
CD
OE2
GLU
GLU
17
17
0.068
0.011
1.252
1.320
N
1
B
B
CD
OE2
GLU
GLU
27
27
0.071
0.011
1.252
1.323
N
1
B
B
CD
OE2
GLU
GLU
28
28
0.070
0.011
1.252
1.322
N
1
B
B
CD
OE2
GLU
GLU
43
43
0.071
0.011
1.252
1.323
N
1
C
C
CD
OE2
GLU
GLU
27
27
0.073
0.011
1.252
1.325
N
1
C
C
CD
OE2
GLU
GLU
28
28
0.074
0.011
1.252
1.326
N
1
C
C
CD
OE2
GLU
GLU
43
43
0.075
0.011
1.252
1.327
N
1
D
D
CD
OE2
GLU
GLU
27
27
0.070
0.011
1.252
1.322
N
1
A
SER
5
-106.89
-60.41
1
B
ILE
51
-127.22
-52.10
1
C
LYS
2
-64.43
97.13
1
C
MET
4
4.31
-95.57
1
C
SER
5
-36.44
-37.15
1
C
GLU
28
-71.68
49.80
1
C
ASN
29
-165.50
-30.88
1
C
LYS
47
-82.86
38.73
1
C
GLU
48
177.73
-62.09
1
D
MET
4
-29.64
-61.67
1
D
PHE
10
-170.77
134.97
1
D
ARG
50
-106.05
-80.66
1
D
ILE
51
-45.17
158.80
0.2250000
2.600
21.000
11253
95.000
1
0.000
2.600
21.000
45
2653
0
896
1712
0.010
1.510
2.600
1PAR
161619
11253
1
refinement
TNT
DNA RECOGNITION BY BETA-SHEETS IN THE ARC REPRESSOR-OPERATOR CRYSTAL STRUCTURE
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
THE TRANSFORMATION PRESENTED ON *MTRIX 1* RECORDS BELOW
WILL YIELD APPROXIMATE COORDINATES FOR CHAIN A WHEN APPLIED
TO CHAIN B (DIMER SYMMETRY AXIS). THE TRANSFORMATION
PRESENTED ON *MTRIX 2* RECORDS BELOW WILL YIELD APPROXIMATE
COORDINATES FOR CHAIN C WHEN APPLIED TO CHAIN D (DIMER
SYMMETRY AXIS). THE TRANSFORMATION PRESENTED ON *MTRIX 3*
RECORDS BELOW WILL YIELD APPROXIMATE COORDINATES FOR CHAINS
A AND B WHEN APPLIED TO CHAINS C AND D, RESPECTIVELY. THIS
THIRD TRANSFORMATION RELATES DIMER CD AND THE RIGHT
OPERATOR HALF-SITE TO DIMER AB AND THE LEFT OPERATOR
HALF-SITE. (TETRAMER SYMMETRY AXIS).
A
PRO
15
C
PRO
15
HELX_P
HELIX A IN MONOMER A
A
GLY
30
C
GLY
30
1
A
16
A
SER
32
C
SER
32
HELX_P
HELIX B IN MONOMER A
A
GLU
48
C
GLU
48
1
B
17
B
PRO
15
D
PRO
15
HELX_P
HELIX A IN MONOMER B
B
GLY
30
D
GLY
30
1
A
16
B
SER
32
D
SER
32
HELX_P
HELIX B IN MONOMER B
B
GLU
48
D
GLU
48
1
B
17
C
PRO
15
E
PRO
15
HELX_P
HELIX A IN MONOMER C
C
GLY
30
E
GLY
30
1
A
16
C
SER
32
E
SER
32
HELX_P
HELIX B IN MONOMER C
C
GLU
48
E
GLU
48
1
B
17
D
PRO
15
F
PRO
15
HELX_P
HELIX A IN MONOMER D
D
GLY
30
F
GLY
30
1
A
16
D
SER
32
F
SER
32
HELX_P
HELIX B IN MONOMER D
D
GLU
48
F
GLU
48
1
B
17
hydrog
WATSON-CRICK
E
DA
2
A
N1
DA
2
1_555
F
DT
22
B
N3
DT
22
1_555
hydrog
WATSON-CRICK
E
DA
2
A
N6
DA
2
1_555
F
DT
22
B
O4
DT
22
1_555
hydrog
WATSON-CRICK
E
DT
3
A
N3
DT
3
1_555
F
DA
21
B
N1
DA
21
1_555
hydrog
WATSON-CRICK
E
DT
3
A
O4
DT
3
1_555
F
DA
21
B
N6
DA
21
1_555
hydrog
WATSON-CRICK
E
DA
4
A
N1
DA
4
1_555
F
DT
20
B
N3
DT
20
1_555
hydrog
WATSON-CRICK
E
DA
4
A
N6
DA
4
1_555
F
DT
20
B
O4
DT
20
1_555
hydrog
WATSON-CRICK
E
DG
5
A
N1
DG
5
1_555
F
DC
19
B
N3
DC
19
1_555
hydrog
WATSON-CRICK
E
DG
5
A
N2
DG
5
1_555
F
DC
19
B
O2
DC
19
1_555
hydrog
WATSON-CRICK
E
DG
5
A
O6
DG
5
1_555
F
DC
19
B
N4
DC
19
1_555
hydrog
WATSON-CRICK
E
DT
6
A
N3
DT
6
1_555
F
DA
18
B
N1
DA
18
1_555
hydrog
WATSON-CRICK
E
DT
6
A
O4
DT
6
1_555
F
DA
18
B
N6
DA
18
1_555
hydrog
WATSON-CRICK
E
DA
7
A
N1
DA
7
1_555
F
DT
17
B
N3
DT
17
1_555
hydrog
WATSON-CRICK
E
DA
7
A
N6
DA
7
1_555
F
DT
17
B
O4
DT
17
1_555
hydrog
WATSON-CRICK
E
DG
8
A
N1
DG
8
1_555
F
DC
16
B
N3
DC
16
1_555
hydrog
WATSON-CRICK
E
DG
8
A
N2
DG
8
1_555
F
DC
16
B
O2
DC
16
1_555
hydrog
WATSON-CRICK
E
DG
8
A
O6
DG
8
1_555
F
DC
16
B
N4
DC
16
1_555
hydrog
WATSON-CRICK
E
DA
9
A
N1
DA
9
1_555
F
DT
15
B
N3
DT
15
1_555
hydrog
WATSON-CRICK
E
DA
9
A
N6
DA
9
1_555
F
DT
15
B
O4
DT
15
1_555
hydrog
WATSON-CRICK
E
DG
10
A
N1
DG
10
1_555
F
DC
14
B
N3
DC
14
1_555
hydrog
WATSON-CRICK
E
DG
10
A
N2
DG
10
1_555
F
DC
14
B
O2
DC
14
1_555
hydrog
WATSON-CRICK
E
DG
10
A
O6
DG
10
1_555
F
DC
14
B
N4
DC
14
1_555
hydrog
WATSON-CRICK
E
DT
11
A
N3
DT
11
1_555
F
DA
13
B
N1
DA
13
1_555
hydrog
WATSON-CRICK
E
DT
11
A
O4
DT
11
1_555
F
DA
13
B
N6
DA
13
1_555
hydrog
WATSON-CRICK
E
DG
12
A
N1
DG
12
1_555
F
DC
12
B
N3
DC
12
1_555
hydrog
WATSON-CRICK
E
DG
12
A
N2
DG
12
1_555
F
DC
12
B
O2
DC
12
1_555
hydrog
WATSON-CRICK
E
DG
12
A
O6
DG
12
1_555
F
DC
12
B
N4
DC
12
1_555
hydrog
WATSON-CRICK
E
DC
13
A
N3
DC
13
1_555
F
DG
11
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
E
DC
13
A
N4
DC
13
1_555
F
DG
11
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
E
DC
13
A
O2
DC
13
1_555
F
DG
11
B
N2
DG
11
1_555
hydrog
WATSON-CRICK
E
DT
14
A
N3
DT
14
1_555
F
DA
10
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
E
DT
14
A
O4
DT
14
1_555
F
DA
10
B
N6
DA
10
1_555
hydrog
WATSON-CRICK
E
DT
15
A
N3
DT
15
1_555
F
DA
9
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
E
DT
15
A
O4
DT
15
1_555
F
DA
9
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
E
DC
16
A
N3
DC
16
1_555
F
DG
8
B
N1
DG
8
1_555
hydrog
WATSON-CRICK
E
DC
16
A
N4
DC
16
1_555
F
DG
8
B
O6
DG
8
1_555
hydrog
WATSON-CRICK
E
DC
16
A
O2
DC
16
1_555
F
DG
8
B
N2
DG
8
1_555
hydrog
WATSON-CRICK
E
DT
17
A
N3
DT
17
1_555
F
DA
7
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
E
DT
17
A
O4
DT
17
1_555
F
DA
7
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
E
DA
18
A
N1
DA
18
1_555
F
DT
6
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
E
DA
18
A
N6
DA
18
1_555
F
DT
6
B
O4
DT
6
1_555
hydrog
DT-DA PAIR
E
DT
19
A
N3
DT
19
1_555
F
DA
5
B
N1
DA
5
1_555
hydrog
DC-DG PAIR
E
DC
20
A
O2
DC
20
1_555
F
DG
4
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
E
DA
21
A
N1
DA
21
1_555
F
DT
3
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
E
DA
21
A
N6
DA
21
1_555
F
DT
3
B
O4
DT
3
1_555
hydrog
DT-DA PAIR
E
DT
22
A
N3
DT
22
1_555
F
DA
2
B
N1
DA
2
1_555
TRANSCRIPTION/DNA
PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX
given
-0.511800
0.112700
-0.851700
0.130700
-0.969600
-0.206800
-0.849100
-0.217200
0.481500
63.45470
-8.03550
35.21450
given
0.535600
0.039500
-0.843500
0.042600
-0.998900
-0.019800
-0.843400
-0.025300
-0.536700
58.08270
-4.33970
105.34710
given
0.014600
0.119900
-0.992700
0.100400
-0.987900
-0.117900
-0.994800
-0.098000
-0.026400
70.37200
-5.90280
71.22350
RARC_BPP22
UNP
3
P03050
1PAR
PDB
1
1PAR
1PAR
PDB
2
1PAR
1
53
1PAR
1
53
P03050
A
1
1
53
1
53
1PAR
1
53
P03050
B
1
1
53
1
53
1PAR
1
53
P03050
C
1
1
53
1
53
1PAR
1
53
P03050
D
1
1
53
1
22
1PAR
1
22
1PAR
E
2
1
22
1
22
1PAR
1
22
1PAR
F
3
1
22
2
2
anti-parallel
anti-parallel
A
PRO
8
C
PRO
8
A
TRP
14
C
TRP
14
B
PRO
8
D
PRO
8
B
TRP
14
D
TRP
14
C
PRO
8
E
PRO
8
C
TRP
14
E
TRP
14
D
PRO
8
F
PRO
8
D
TRP
14
F
TRP
14
Unknown
4
E
DA
2
A
DA
2
4
1_555
E
DT
22
A
DT
22
4
1_555
F
DA
2
B
DA
2
4
1_555
F
DT
22
B
DT
22
4
1_555
4
P 1 21 1