0.024120 0.000000 0.000000 0.000000 0.013687 0.000000 0.000000 0.000000 0.010321 0.00000 0.00000 0.00000 Furukawa, H. Gouaux, E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 41.460 73.060 96.890 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C3 H7 N O3 105.093 D-SERINE D-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Embo J. EMJODG 0897 0261-4189 22 2873 2885 10.1093/emboj/cdg303 12805203 Mechanisms of activation, inhibition and specificity: crystal structures of the NMDA receptor NR1 ligand-binding core 2003 110 1 CCD 2002-08-09 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.97950 1.0 X4A NSLS 0.97950 SYNCHROTRON NSLS BEAMLINE X4A 33327.035 N-methyl-D-aspartate Receptor Subunit 1 Ligand Binding Core 1 man polymer 105.093 D-SERINE 1 syn non-polymer 18.015 water 353 nat water no no GMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNF TYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINTERAQYIEFSKPFKYQGLTILVKKGTRITGIN DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVT TGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS GMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNF TYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINTERAQYIEFSKPFKYQGLTILVKKGTRITGIN DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVT TGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Norway rat Rattus Escherichia sample 2 152 NMDAR1 10116 forebrain Rattus norvegicus 562 Escherichia coli OrigamiB (DE3) PLASMID pET22b(+) Norway rat Rattus Escherichia sample 155 292 NMDAR1 10116 forebrain Rattus norvegicus 562 Escherichia coli OrigamiB (DE3) PLASMID pET22b(+) 1 2.20 44.11 VAPOR DIFFUSION, HANGING DROP 6.0 PEG 1000, sodium cacodylate, lithium sulfate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 entity_src_gen software repository Initial release Version format compliance Version format compliance Refinement description Source and taxonomy 1 0 2003-06-24 1 1 2008-04-29 1 2 2011-07-13 1 3 2017-07-26 RCSB Y RCSB 2003-05-14 REL DSN D-SERINE HOH water DSN 901 2 DSN DSN 901 A HOH 1 3 HOH HOH 902 A HOH 2 3 HOH HOH 903 A HOH 3 3 HOH HOH 904 A HOH 4 3 HOH HOH 905 A HOH 5 3 HOH HOH 906 A HOH 6 3 HOH HOH 907 A HOH 7 3 HOH HOH 908 A HOH 8 3 HOH HOH 909 A HOH 9 3 HOH HOH 910 A HOH 10 3 HOH HOH 911 A HOH 11 3 HOH HOH 912 A HOH 12 3 HOH HOH 913 A HOH 13 3 HOH HOH 914 A HOH 14 3 HOH HOH 915 A HOH 15 3 HOH HOH 916 A HOH 16 3 HOH HOH 917 A HOH 17 3 HOH HOH 918 A HOH 18 3 HOH HOH 919 A HOH 19 3 HOH HOH 920 A HOH 20 3 HOH HOH 921 A HOH 21 3 HOH HOH 922 A HOH 22 3 HOH HOH 923 A HOH 23 3 HOH HOH 924 A HOH 24 3 HOH HOH 925 A HOH 25 3 HOH HOH 926 A HOH 26 3 HOH HOH 927 A HOH 27 3 HOH HOH 928 A HOH 28 3 HOH HOH 929 A HOH 29 3 HOH HOH 930 A HOH 30 3 HOH HOH 931 A HOH 31 3 HOH HOH 932 A HOH 32 3 HOH HOH 933 A HOH 33 3 HOH HOH 934 A HOH 34 3 HOH HOH 935 A HOH 35 3 HOH HOH 936 A HOH 36 3 HOH HOH 937 A HOH 37 3 HOH HOH 938 A HOH 38 3 HOH HOH 939 A HOH 39 3 HOH HOH 940 A HOH 40 3 HOH HOH 941 A HOH 41 3 HOH HOH 942 A HOH 42 3 HOH HOH 943 A HOH 43 3 HOH HOH 944 A HOH 44 3 HOH HOH 945 A HOH 45 3 HOH HOH 946 A HOH 46 3 HOH HOH 947 A HOH 47 3 HOH HOH 948 A HOH 48 3 HOH HOH 949 A HOH 49 3 HOH HOH 950 A HOH 50 3 HOH HOH 951 A HOH 51 3 HOH HOH 952 A HOH 52 3 HOH HOH 953 A HOH 53 3 HOH HOH 954 A HOH 54 3 HOH HOH 955 A HOH 55 3 HOH HOH 956 A HOH 56 3 HOH HOH 957 A HOH 57 3 HOH HOH 958 A HOH 58 3 HOH HOH 959 A HOH 59 3 HOH HOH 960 A HOH 60 3 HOH HOH 961 A HOH 61 3 HOH HOH 962 A HOH 62 3 HOH HOH 963 A HOH 63 3 HOH HOH 964 A HOH 64 3 HOH HOH 965 A HOH 65 3 HOH HOH 966 A HOH 66 3 HOH HOH 967 A HOH 67 3 HOH HOH 968 A HOH 68 3 HOH HOH 969 A HOH 69 3 HOH HOH 970 A HOH 70 3 HOH HOH 971 A HOH 71 3 HOH HOH 972 A HOH 72 3 HOH HOH 973 A HOH 73 3 HOH HOH 974 A HOH 74 3 HOH HOH 975 A HOH 75 3 HOH HOH 976 A HOH 76 3 HOH HOH 977 A HOH 77 3 HOH HOH 978 A HOH 78 3 HOH HOH 979 A HOH 79 3 HOH HOH 980 A HOH 80 3 HOH HOH 981 A HOH 81 3 HOH HOH 982 A HOH 82 3 HOH HOH 983 A HOH 84 3 HOH HOH 984 A HOH 85 3 HOH HOH 985 A HOH 86 3 HOH HOH 986 A HOH 87 3 HOH HOH 987 A HOH 88 3 HOH HOH 988 A HOH 89 3 HOH HOH 989 A HOH 90 3 HOH HOH 990 A HOH 91 3 HOH HOH 991 A HOH 92 3 HOH HOH 992 A HOH 93 3 HOH HOH 993 A HOH 94 3 HOH HOH 994 A HOH 95 3 HOH HOH 995 A HOH 96 3 HOH HOH 996 A HOH 97 3 HOH HOH 997 A HOH 98 3 HOH HOH 998 A HOH 99 3 HOH HOH 999 A HOH 100 3 HOH HOH 1000 A HOH 101 3 HOH HOH 1001 A HOH 102 3 HOH HOH 1002 A HOH 103 3 HOH HOH 1003 A HOH 104 3 HOH HOH 1004 A HOH 105 3 HOH HOH 1005 A HOH 106 3 HOH HOH 1006 A HOH 107 3 HOH HOH 1007 A HOH 108 3 HOH HOH 1008 A HOH 109 3 HOH HOH 1009 A HOH 110 3 HOH HOH 1010 A HOH 111 3 HOH HOH 1011 A HOH 112 3 HOH HOH 1012 A HOH 113 3 HOH HOH 1013 A HOH 114 3 HOH HOH 1014 A HOH 115 3 HOH HOH 1015 A HOH 116 3 HOH HOH 1016 A HOH 117 3 HOH HOH 1017 A HOH 118 3 HOH HOH 1018 A HOH 119 3 HOH HOH 1019 A HOH 120 3 HOH HOH 1020 A HOH 121 3 HOH HOH 1021 A HOH 122 3 HOH HOH 1022 A HOH 123 3 HOH HOH 1023 A HOH 125 3 HOH HOH 1024 A HOH 126 3 HOH HOH 1025 A HOH 127 3 HOH HOH 1026 A HOH 128 3 HOH HOH 1027 A HOH 129 3 HOH HOH 1028 A HOH 130 3 HOH HOH 1029 A HOH 131 3 HOH HOH 1030 A HOH 132 3 HOH HOH 1031 A HOH 133 3 HOH HOH 1032 A HOH 134 3 HOH HOH 1033 A HOH 135 3 HOH HOH 1034 A HOH 136 3 HOH HOH 1035 A HOH 137 3 HOH HOH 1036 A HOH 138 3 HOH HOH 1037 A HOH 139 3 HOH HOH 1038 A HOH 140 3 HOH HOH 1039 A HOH 141 3 HOH HOH 1040 A HOH 142 3 HOH HOH 1041 A HOH 143 3 HOH HOH 1042 A HOH 144 3 HOH HOH 1043 A HOH 145 3 HOH HOH 1044 A HOH 147 3 HOH HOH 1045 A HOH 148 3 HOH HOH 1046 A HOH 149 3 HOH HOH 1047 A HOH 150 3 HOH HOH 1048 A HOH 151 3 HOH HOH 1049 A HOH 153 3 HOH HOH 1050 A HOH 154 3 HOH HOH 1051 A HOH 155 3 HOH HOH 1052 A HOH 156 3 HOH HOH 1053 A HOH 157 3 HOH HOH 1054 A HOH 158 3 HOH HOH 1055 A HOH 160 3 HOH HOH 1056 A HOH 161 3 HOH HOH 1057 A HOH 162 3 HOH HOH 1058 A HOH 163 3 HOH HOH 1059 A HOH 164 3 HOH HOH 1060 A HOH 165 3 HOH HOH 1061 A HOH 166 3 HOH HOH 1062 A HOH 167 3 HOH HOH 1063 A HOH 168 3 HOH HOH 1064 A HOH 169 3 HOH HOH 1065 A HOH 170 3 HOH HOH 1066 A HOH 171 3 HOH HOH 1067 A HOH 172 3 HOH HOH 1068 A HOH 173 3 HOH HOH 1069 A HOH 174 3 HOH HOH 1070 A HOH 175 3 HOH HOH 1071 A HOH 176 3 HOH HOH 1072 A HOH 177 3 HOH HOH 1073 A HOH 178 3 HOH HOH 1074 A HOH 179 3 HOH HOH 1075 A HOH 180 3 HOH HOH 1076 A HOH 181 3 HOH HOH 1077 A HOH 182 3 HOH HOH 1078 A HOH 183 3 HOH HOH 1079 A HOH 184 3 HOH HOH 1080 A HOH 185 3 HOH HOH 1081 A HOH 186 3 HOH HOH 1082 A HOH 187 3 HOH HOH 1083 A HOH 188 3 HOH HOH 1084 A HOH 191 3 HOH HOH 1085 A HOH 192 3 HOH HOH 1086 A HOH 193 3 HOH HOH 1087 A HOH 194 3 HOH HOH 1088 A HOH 195 3 HOH HOH 1089 A HOH 196 3 HOH HOH 1090 A HOH 197 3 HOH HOH 1091 A HOH 200 3 HOH HOH 1092 A HOH 201 3 HOH HOH 1093 A HOH 202 3 HOH HOH 1094 A HOH 203 3 HOH HOH 1095 A HOH 204 3 HOH HOH 1096 A HOH 206 3 HOH HOH 1097 A HOH 207 3 HOH HOH 1098 A HOH 208 3 HOH HOH 1099 A HOH 209 3 HOH HOH 1100 A HOH 210 3 HOH HOH 1101 A HOH 211 3 HOH HOH 1102 A HOH 212 3 HOH HOH 1103 A HOH 213 3 HOH HOH 1104 A HOH 216 3 HOH HOH 1105 A HOH 218 3 HOH HOH 1106 A HOH 222 3 HOH HOH 1107 A HOH 226 3 HOH HOH 1108 A HOH 227 3 HOH HOH 1109 A HOH 229 3 HOH HOH 1110 A HOH 232 3 HOH HOH 1111 A HOH 233 3 HOH HOH 1112 A HOH 234 3 HOH HOH 1113 A HOH 235 3 HOH HOH 1114 A HOH 242 3 HOH HOH 1115 A HOH 244 3 HOH HOH 1116 A HOH 246 3 HOH HOH 1117 A HOH 249 3 HOH HOH 1118 A HOH 250 3 HOH HOH 1119 A HOH 252 3 HOH HOH 1120 A HOH 256 3 HOH HOH 1121 A HOH 257 3 HOH HOH 1122 A HOH 260 3 HOH HOH 1123 A HOH 265 3 HOH HOH 1124 A HOH 268 3 HOH HOH 1125 A HOH 270 3 HOH HOH 1126 A HOH 271 3 HOH HOH 1127 A HOH 272 3 HOH HOH 1128 A HOH 275 3 HOH HOH 1129 A HOH 278 3 HOH HOH 1130 A HOH 280 3 HOH HOH 1131 A HOH 282 3 HOH HOH 1132 A HOH 288 3 HOH HOH 1133 A HOH 294 3 HOH HOH 1134 A HOH 296 3 HOH HOH 1135 A HOH 297 3 HOH HOH 1136 A HOH 298 3 HOH HOH 1137 A HOH 299 3 HOH HOH 1138 A HOH 300 3 HOH HOH 1139 A HOH 301 3 HOH HOH 1140 A HOH 302 3 HOH HOH 1141 A HOH 303 3 HOH HOH 1142 A HOH 304 3 HOH HOH 1143 A HOH 305 3 HOH HOH 1144 A HOH 306 3 HOH HOH 1145 A HOH 307 3 HOH HOH 1146 A HOH 308 3 HOH HOH 1147 A HOH 309 3 HOH HOH 1148 A HOH 310 3 HOH HOH 1149 A HOH 311 3 HOH HOH 1150 A HOH 312 3 HOH HOH 1151 A HOH 313 3 HOH HOH 1152 A HOH 314 3 HOH HOH 1153 A HOH 315 3 HOH HOH 1154 A HOH 316 3 HOH HOH 1155 A HOH 317 3 HOH HOH 1156 A HOH 318 3 HOH HOH 1157 A HOH 319 3 HOH HOH 1158 A HOH 320 3 HOH HOH 1159 A HOH 321 3 HOH HOH 1160 A HOH 322 3 HOH HOH 1161 A HOH 323 3 HOH HOH 1162 A HOH 324 3 HOH HOH 1163 A HOH 325 3 HOH HOH 1164 A HOH 326 3 HOH HOH 1165 A HOH 327 3 HOH HOH 1166 A HOH 328 3 HOH HOH 1167 A HOH 330 3 HOH HOH 1168 A HOH 331 3 HOH HOH 1169 A HOH 332 3 HOH HOH 1170 A HOH 333 3 HOH HOH 1171 A HOH 334 3 HOH HOH 1172 A HOH 335 3 HOH HOH 1173 A HOH 336 3 HOH HOH 1174 A HOH 337 3 HOH HOH 1175 A HOH 338 3 HOH HOH 1176 A HOH 339 3 HOH HOH 1177 A HOH 340 3 HOH HOH 1178 A HOH 341 3 HOH HOH 1179 A HOH 342 3 HOH HOH 1180 A HOH 343 3 HOH HOH 1181 A HOH 345 3 HOH HOH 1182 A HOH 346 3 HOH HOH 1183 A HOH 347 3 HOH HOH 1184 A HOH 348 3 HOH HOH 1185 A HOH 349 3 HOH HOH 1186 A HOH 351 3 HOH HOH 1187 A HOH 352 3 HOH HOH 1188 A HOH 354 3 HOH HOH 1189 A HOH 355 3 HOH HOH 1190 A HOH 356 3 HOH HOH 1191 A HOH 358 3 HOH HOH 1192 A HOH 359 3 HOH HOH 1193 A HOH 362 3 HOH HOH 1194 A HOH 363 3 HOH HOH 1195 A HOH 364 3 HOH HOH 1196 A HOH 365 3 HOH HOH 1197 A HOH 366 3 HOH HOH 1198 A HOH 367 3 HOH HOH 1199 A HOH 368 3 HOH HOH 1200 A HOH 369 3 HOH HOH 1201 A HOH 371 3 HOH HOH 1202 A HOH 372 3 HOH HOH 1203 A HOH 373 3 HOH HOH 1204 A HOH 374 3 HOH HOH 1205 A HOH 375 3 HOH HOH 1206 A HOH 376 3 HOH HOH 1207 A HOH 377 3 HOH HOH 1208 A HOH 378 3 HOH HOH 1209 A HOH 380 3 HOH HOH 1210 A HOH 381 3 HOH HOH 1211 A HOH 384 3 HOH HOH 1212 A HOH 385 3 HOH HOH 1213 A HOH 386 3 HOH HOH 1214 A HOH 388 3 HOH HOH 1215 A HOH 389 3 HOH HOH 1216 A HOH 392 3 HOH HOH 1217 A HOH 393 3 HOH HOH 1218 A HOH 394 3 HOH HOH 1219 A HOH 397 3 HOH HOH 1220 A HOH 400 3 HOH HOH 1221 A HOH 403 3 HOH HOH 1222 A HOH 405 3 HOH HOH 1223 A HOH 406 3 HOH HOH 1224 A HOH 408 3 HOH HOH 1225 A HOH 412 3 HOH HOH 1226 A HOH 413 3 HOH HOH 1227 A HOH 415 3 HOH HOH 1228 A HOH 418 3 HOH HOH 1229 A HOH 419 3 HOH HOH 1230 A HOH 421 3 HOH HOH 1231 A HOH 422 3 HOH HOH 1232 A HOH 424 3 HOH HOH 1233 A HOH 427 3 HOH HOH 1234 A HOH 429 3 HOH HOH 1235 A HOH 432 3 HOH HOH 1236 A HOH 434 3 HOH HOH 1237 A HOH 435 3 HOH HOH 1238 A HOH 437 3 HOH HOH 1239 A HOH 438 3 HOH HOH 1240 A HOH 439 3 HOH HOH 1241 A HOH 440 3 HOH HOH 1242 A HOH 444 3 HOH HOH 1243 A HOH 446 3 HOH HOH 1244 A HOH 452 3 HOH HOH 1245 A HOH 456 3 HOH HOH 1246 A HOH 457 3 HOH HOH 1247 A HOH 458 3 HOH HOH 1248 A HOH 459 3 HOH HOH 1249 A HOH 460 3 HOH HOH 1250 A HOH 462 3 HOH HOH 1251 A HOH 469 3 HOH HOH 1252 A HOH 470 3 HOH HOH 1253 A HOH 473 3 HOH HOH 1254 A n 1 1 A n 2 2 A n 3 3 A THR 4 n 4 THR 4 A ARG 5 n 5 ARG 5 A LEU 6 n 6 LEU 6 A ALA 7 n 7 LYS 7 A ILE 8 n 8 ILE 8 A VAL 9 n 9 VAL 9 A THR 10 n 10 THR 10 A ILE 11 n 11 ILE 11 A HIS 12 n 12 HIS 12 A GLN 13 n 13 GLN 13 A GLU 14 n 14 GLU 14 A PRO 15 n 15 PRO 15 A PHE 16 n 16 PHE 16 A VAL 17 n 17 VAL 17 A TYR 18 n 18 TYR 18 A VAL 19 n 19 VAL 19 A LYS 20 n 20 LYS 20 A PRO 21 n 21 PRO 21 A THR 22 n 22 THR 22 A MET 23 n 23 MET 23 A SER 24 n 24 SER 24 A ASP 25 n 25 ASP 25 A GLY 26 n 26 GLY 26 A THR 27 n 27 THR 27 A CYS 28 n 28 CYS 28 A ALA 29 n 29 LYS 29 A GLU 30 n 30 GLU 30 A GLU 31 n 31 GLU 31 A PHE 32 n 32 PHE 32 A THR 33 n 33 THR 33 A VAL 34 n 34 VAL 34 A ASN 35 n 35 ASN 35 A GLY 36 n 36 GLY 36 A ASP 37 n 37 ASP 37 A PRO 38 n 38 PRO 38 A VAL 39 n 39 VAL 39 A LYS 40 n 40 LYS 40 A LYS 41 n 41 LYS 41 A VAL 42 n 42 VAL 42 A ILE 43 n 43 ILE 43 A CYS 44 n 44 CYS 44 A THR 45 n 45 THR 45 A GLY 46 n 46 GLY 46 A PRO 47 n 47 PRO 47 A ASN 48 n 48 ASN 48 A n 49 49 A n 50 50 A n 51 51 A n 52 52 A n 53 53 A n 54 54 A n 55 55 A ARG 56 n 56 ARG 56 A HIS 57 n 57 HIS 57 A THR 58 n 58 THR 58 A VAL 59 n 59 VAL 59 A PRO 60 n 60 PRO 60 A GLN 61 n 61 GLN 61 A CYS 62 n 62 CYS 62 A CYS 63 n 63 CYS 63 A TYR 64 n 64 TYR 64 A GLY 65 n 65 GLY 65 A PHE 66 n 66 PHE 66 A CYS 67 n 67 CYS 67 A ILE 68 n 68 ILE 68 A ASP 69 n 69 ASP 69 A LEU 70 n 70 LEU 70 A LEU 71 n 71 LEU 71 A ILE 72 n 72 ILE 72 A LYS 73 n 73 LYS 73 A LEU 74 n 74 LEU 74 A ALA 75 n 75 ALA 75 A ALA 76 n 76 ARG 76 A THR 77 n 77 THR 77 A MET 78 n 78 MET 78 A ASN 79 n 79 ASN 79 A PHE 80 n 80 PHE 80 A THR 81 n 81 THR 81 A TYR 82 n 82 TYR 82 A GLU 83 n 83 GLU 83 A VAL 84 n 84 VAL 84 A HIS 85 n 85 HIS 85 A LEU 86 n 86 LEU 86 A VAL 87 n 87 VAL 87 A ALA 88 n 88 ALA 88 A ASP 89 n 89 ASP 89 A GLY 90 n 90 GLY 90 A LYS 91 n 91 LYS 91 A PHE 92 n 92 PHE 92 A GLY 93 n 93 GLY 93 A THR 94 n 94 THR 94 A GLN 95 n 95 GLN 95 A GLU 96 n 96 GLU 96 A ARG 97 n 97 ARG 97 A VAL 98 n 98 VAL 98 A ASN 99 n 99 ASN 99 A ASN 100 n 100 ASN 100 A SER 101 n 101 SER 101 A ASN 102 n 102 ASN 102 A ALA 103 n 103 LYS 103 A LYS 104 n 104 LYS 104 A GLU 105 n 105 GLU 105 A TRP 106 n 106 TRP 106 A ASN 107 n 107 ASN 107 A GLY 108 n 108 GLY 108 A MET 109 n 109 MET 109 A MET 110 n 110 MET 110 A GLY 111 n 111 GLY 111 A GLU 112 n 112 GLU 112 A LEU 113 n 113 LEU 113 A LEU 114 n 114 LEU 114 A SER 115 n 115 SER 115 A GLY 116 n 116 GLY 116 A GLN 117 n 117 GLN 117 A ALA 118 n 118 ALA 118 A ASP 119 n 119 ASP 119 A MET 120 n 120 MET 120 A ILE 121 n 121 ILE 121 A VAL 122 n 122 VAL 122 A ALA 123 n 123 ALA 123 A PRO 124 n 124 PRO 124 A LEU 125 n 125 LEU 125 A THR 126 n 126 THR 126 A ILE 127 n 127 ILE 127 A ASN 128 n 128 ASN 128 A THR 129 n 129 THR 129 A GLU 130 n 130 GLU 130 A ARG 131 n 131 ARG 131 A ALA 132 n 132 ALA 132 A GLN 133 n 133 GLN 133 A TYR 134 n 134 TYR 134 A ILE 135 n 135 ILE 135 A ALA 136 n 136 GLU 136 A PHE 137 n 137 PHE 137 A SER 138 n 138 SER 138 A LYS 139 n 139 LYS 139 A PRO 140 n 140 PRO 140 A PHE 141 n 141 PHE 141 A LYS 142 n 142 LYS 142 A TYR 143 n 143 TYR 143 A GLN 144 n 144 GLN 144 A GLY 145 n 145 GLY 145 A LEU 146 n 146 LEU 146 A THR 147 n 147 THR 147 A ILE 148 n 148 ILE 148 A LEU 149 n 149 LEU 149 A VAL 150 n 150 VAL 150 A LYS 151 n 151 LYS 151 A LYS 152 n 152 LYS 152 A GLY 153 n 153 GLY 153 A THR 154 n 154 THR 154 A ALA 155 n 155 ARG 155 A ILE 156 n 156 ILE 156 A THR 157 n 157 THR 157 A GLY 158 n 158 GLY 158 A ILE 159 n 159 ILE 159 A ASN 160 n 160 ASN 160 A ASP 161 n 161 ASP 161 A PRO 162 n 162 PRO 162 A ARG 163 n 163 ARG 163 A LEU 164 n 164 LEU 164 A ARG 165 n 165 ARG 165 A ASN 166 n 166 ASN 166 A PRO 167 n 167 PRO 167 A SER 168 n 168 SER 168 A ALA 169 n 169 ASP 169 A ALA 170 n 170 LYS 170 A PHE 171 n 171 PHE 171 A ILE 172 n 172 ILE 172 A TYR 173 n 173 TYR 173 A ALA 174 n 174 ALA 174 A THR 175 n 175 THR 175 A VAL 176 n 176 VAL 176 A LYS 177 n 177 LYS 177 A GLN 178 n 178 GLN 178 A SER 179 n 179 SER 179 A SER 180 n 180 SER 180 A VAL 181 n 181 VAL 181 A ASP 182 n 182 ASP 182 A ILE 183 n 183 ILE 183 A TYR 184 n 184 TYR 184 A PHE 185 n 185 PHE 185 A ALA 186 n 186 ARG 186 A ALA 187 n 187 ARG 187 A GLN 188 n 188 GLN 188 A ALA 189 n 189 VAL 189 A ALA 190 n 190 GLU 190 A LEU 191 n 191 LEU 191 A SER 192 n 192 SER 192 A THR 193 n 193 THR 193 A MET 194 n 194 MET 194 A TYR 195 n 195 TYR 195 A ALA 196 n 196 ARG 196 A HIS 197 n 197 HIS 197 A MET 198 n 198 MET 198 A ALA 199 n 199 GLU 199 A ALA 200 n 200 LYS 200 A HIS 201 n 201 HIS 201 A ASN 202 n 202 ASN 202 A TYR 203 n 203 TYR 203 A GLU 204 n 204 GLU 204 A SER 205 n 205 SER 205 A ALA 206 n 206 ALA 206 A ALA 207 n 207 ALA 207 A GLU 208 n 208 GLU 208 A ALA 209 n 209 ALA 209 A ILE 210 n 210 ILE 210 A GLN 211 n 211 GLN 211 A ALA 212 n 212 ALA 212 A VAL 213 n 213 VAL 213 A ARG 214 n 214 ARG 214 A ASP 215 n 215 ASP 215 A ASN 216 n 216 ASN 216 A LYS 217 n 217 LYS 217 A LEU 218 n 218 LEU 218 A HIS 219 n 219 HIS 219 A ALA 220 n 220 ALA 220 A PHE 221 n 221 PHE 221 A ILE 222 n 222 ILE 222 A TRP 223 n 223 TRP 223 A ASP 224 n 224 ASP 224 A SER 225 n 225 SER 225 A ALA 226 n 226 ALA 226 A VAL 227 n 227 VAL 227 A LEU 228 n 228 LEU 228 A GLU 229 n 229 GLU 229 A PHE 230 n 230 PHE 230 A GLU 231 n 231 GLU 231 A ALA 232 n 232 ALA 232 A SER 233 n 233 SER 233 A GLN 234 n 234 GLN 234 A LYS 235 n 235 LYS 235 A CYS 236 n 236 CYS 236 A ASP 237 n 237 ASP 237 A LEU 238 n 238 LEU 238 A VAL 239 n 239 VAL 239 A THR 240 n 240 THR 240 A THR 241 n 241 THR 241 A GLY 242 n 242 GLY 242 A ALA 243 n 243 GLU 243 A LEU 244 n 244 LEU 244 A PHE 245 n 245 PHE 245 A PHE 246 n 246 PHE 246 A ALA 247 n 247 ARG 247 A SER 248 n 248 SER 248 A GLY 249 n 249 GLY 249 A PHE 250 n 250 PHE 250 A GLY 251 n 251 GLY 251 A ILE 252 n 252 ILE 252 A GLY 253 n 253 GLY 253 A MET 254 n 254 MET 254 A ARG 255 n 255 ARG 255 A LYS 256 n 256 LYS 256 A ASP 257 n 257 ASP 257 A SER 258 n 258 SER 258 A ALA 259 n 259 PRO 259 A TRP 260 n 260 TRP 260 A ALA 261 n 261 LYS 261 A ALA 262 n 262 GLN 262 A ASN 263 n 263 ASN 263 A VAL 264 n 264 VAL 264 A SER 265 n 265 SER 265 A LEU 266 n 266 LEU 266 A SER 267 n 267 SER 267 A ILE 268 n 268 ILE 268 A LEU 269 n 269 LEU 269 A ALA 270 n 270 LYS 270 A SER 271 n 271 SER 271 A HIS 272 n 272 HIS 272 A GLU 273 n 273 GLU 273 A ASN 274 n 274 ASN 274 A GLY 275 n 275 GLY 275 A PHE 276 n 276 PHE 276 A MET 277 n 277 MET 277 A GLU 278 n 278 GLU 278 A ASP 279 n 279 ASP 279 A LEU 280 n 280 LEU 280 A ASP 281 n 281 ASP 281 A LYS 282 n 282 LYS 282 A THR 283 n 283 THR 283 A TRP 284 n 284 TRP 284 A VAL 285 n 285 VAL 285 A ARG 286 n 286 ARG 286 A TYR 287 n 287 TYR 287 A GLN 288 n 288 GLN 288 A GLU 289 n 289 GLU 289 A CYS 290 n 290 CYS 290 A ASP 291 n 291 ASP 291 A SER 292 n 292 SER 292 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 18 A N TYR 18 A O TYR 64 A O TYR 64 A O CYS 63 A O CYS 63 A N VAL 42 A N VAL 42 A N THR 45 A N THR 45 A O LEU 86 A O LEU 86 A O GLU 83 A O GLU 83 A N ILE 8 A N ILE 8 A N VAL 9 A N VAL 9 A O MET 120 A O MET 120 A N GLU 96 A N GLU 96 A O GLU 105 A O GLU 105 A N GLU 136 A N GLU 136 A O MET 254 A O MET 254 A O SER 248 A O SER 248 A N GLN 144 A N GLN 144 A N LEU 149 A N LEU 149 A O PHE 221 A O PHE 221 A O ILE 222 A O ILE 222 A N ALA 174 A N ALA 174 A O SER 248 A O SER 248 A N GLN 144 A N GLN 144 A N VAL 150 A N VAL 150 A O VAL 239 A O VAL 239 1 A OG1 THR 4 A OG1 THR 4 1 Y 1 A CG2 THR 4 A CG2 THR 4 1 Y 1 A CG LYS 7 A CG LYS 7 1 Y 1 A CD LYS 7 A CD LYS 7 1 Y 1 A CE LYS 7 A CE LYS 7 1 Y 1 A NZ LYS 7 A NZ LYS 7 1 Y 1 A CG LYS 29 A CG LYS 29 1 Y 1 A CD LYS 29 A CD LYS 29 1 Y 1 A CE LYS 29 A CE LYS 29 1 Y 1 A NZ LYS 29 A NZ LYS 29 1 Y 1 A CG ASN 48 A CG ASN 48 1 Y 1 A OD1 ASN 48 A OD1 ASN 48 1 Y 1 A ND2 ASN 48 A ND2 ASN 48 1 Y 1 A CG ARG 56 A CG ARG 56 1 Y 1 A CD ARG 56 A CD ARG 56 1 Y 1 A NE ARG 56 A NE ARG 56 1 Y 1 A CZ ARG 56 A CZ ARG 56 1 Y 1 A NH1 ARG 56 A NH1 ARG 56 1 Y 1 A NH2 ARG 56 A NH2 ARG 56 1 Y 1 A CG ARG 76 A CG ARG 76 1 Y 1 A CD ARG 76 A CD ARG 76 1 Y 1 A NE ARG 76 A NE ARG 76 1 Y 1 A CZ ARG 76 A CZ ARG 76 1 Y 1 A NH1 ARG 76 A NH1 ARG 76 1 Y 1 A NH2 ARG 76 A NH2 ARG 76 1 Y 1 A CG LYS 103 A CG LYS 103 1 Y 1 A CD LYS 103 A CD LYS 103 1 Y 1 A CE LYS 103 A CE LYS 103 1 Y 1 A NZ LYS 103 A NZ LYS 103 1 Y 1 A CG GLU 136 A CG GLU 136 1 Y 1 A CD GLU 136 A CD GLU 136 1 Y 1 A OE1 GLU 136 A OE1 GLU 136 1 Y 1 A OE2 GLU 136 A OE2 GLU 136 1 Y 1 A CG ARG 155 A CG ARG 155 1 Y 1 A CD ARG 155 A CD ARG 155 1 Y 1 A NE ARG 155 A NE ARG 155 1 Y 1 A CZ ARG 155 A CZ ARG 155 1 Y 1 A NH1 ARG 155 A NH1 ARG 155 1 Y 1 A NH2 ARG 155 A NH2 ARG 155 1 Y 1 A CG ASP 169 A CG ASP 169 1 Y 1 A OD1 ASP 169 A OD1 ASP 169 1 Y 1 A OD2 ASP 169 A OD2 ASP 169 1 Y 1 A CG LYS 170 A CG LYS 170 1 Y 1 A CD LYS 170 A CD LYS 170 1 Y 1 A CE LYS 170 A CE LYS 170 1 Y 1 A NZ LYS 170 A NZ LYS 170 1 Y 1 A CG ARG 186 A CG ARG 186 1 Y 1 A CD ARG 186 A CD ARG 186 1 Y 1 A NE ARG 186 A NE ARG 186 1 Y 1 A CZ ARG 186 A CZ ARG 186 1 Y 1 A NH1 ARG 186 A NH1 ARG 186 1 Y 1 A NH2 ARG 186 A NH2 ARG 186 1 Y 1 A CG ARG 187 A CG ARG 187 1 Y 1 A CD ARG 187 A CD ARG 187 1 Y 1 A NE ARG 187 A NE ARG 187 1 Y 1 A CZ ARG 187 A CZ ARG 187 1 Y 1 A NH1 ARG 187 A NH1 ARG 187 1 Y 1 A NH2 ARG 187 A NH2 ARG 187 1 Y 1 A CG1 VAL 189 A CG1 VAL 189 1 Y 1 A CG2 VAL 189 A CG2 VAL 189 1 Y 1 A CG GLU 190 A CG GLU 190 1 Y 1 A CD GLU 190 A CD GLU 190 1 Y 1 A OE1 GLU 190 A OE1 GLU 190 1 Y 1 A OE2 GLU 190 A OE2 GLU 190 1 Y 1 A CG ARG 196 A CG ARG 196 1 Y 1 A CD ARG 196 A CD ARG 196 1 Y 1 A NE ARG 196 A NE ARG 196 1 Y 1 A CZ ARG 196 A CZ ARG 196 1 Y 1 A NH1 ARG 196 A NH1 ARG 196 1 Y 1 A NH2 ARG 196 A NH2 ARG 196 1 Y 1 A CG GLU 199 A CG GLU 199 1 Y 1 A CD GLU 199 A CD GLU 199 1 Y 1 A OE1 GLU 199 A OE1 GLU 199 1 Y 1 A OE2 GLU 199 A OE2 GLU 199 1 Y 1 A CG LYS 200 A CG LYS 200 1 Y 1 A CD LYS 200 A CD LYS 200 1 Y 1 A CE LYS 200 A CE LYS 200 1 Y 1 A NZ LYS 200 A NZ LYS 200 1 Y 1 A CG GLU 243 A CG GLU 243 1 Y 1 A CD GLU 243 A CD GLU 243 1 Y 1 A OE1 GLU 243 A OE1 GLU 243 1 Y 1 A OE2 GLU 243 A OE2 GLU 243 1 Y 1 A CG ARG 247 A CG ARG 247 1 Y 1 A CD ARG 247 A CD ARG 247 1 Y 1 A NE ARG 247 A NE ARG 247 1 Y 1 A CZ ARG 247 A CZ ARG 247 1 Y 1 A NH1 ARG 247 A NH1 ARG 247 1 Y 1 A NH2 ARG 247 A NH2 ARG 247 1 Y 1 A CG PRO 259 A CG PRO 259 1 Y 1 A CD PRO 259 A CD PRO 259 1 Y 1 A CG LYS 261 A CG LYS 261 1 Y 1 A CD LYS 261 A CD LYS 261 1 Y 1 A CE LYS 261 A CE LYS 261 1 Y 1 A NZ LYS 261 A NZ LYS 261 1 Y 1 A CG GLN 262 A CG GLN 262 1 Y 1 A CD GLN 262 A CD GLN 262 1 Y 1 A OE1 GLN 262 A OE1 GLN 262 1 Y 1 A NE2 GLN 262 A NE2 GLN 262 1 Y 1 A CG LYS 270 A CG LYS 270 1 Y 1 A CD LYS 270 A CD LYS 270 1 Y 1 A CE LYS 270 A CE LYS 270 1 Y 1 A NZ LYS 270 A NZ LYS 270 1 Y 1 A GLY 1 A GLY 1 1 Y 1 A MET 2 A MET 2 1 Y 1 A SER 3 A SER 3 1 Y 1 A ASP 49 A ASP 49 1 Y 1 A THR 50 A THR 50 1 Y 1 A SER 51 A SER 51 1 Y 1 A PRO 52 A PRO 52 1 Y 1 A GLY 53 A GLY 53 1 Y 1 A SER 54 A SER 54 1 Y 1 A PRO 55 A PRO 55 1 Y 1 A A CD OE2 GLU GLU 105 105 0.078 0.011 1.252 1.330 N 1 A GLN 13 -169.56 89.38 1 A GLN 144 -151.99 -146.50 1 A ARG 187 -92.22 35.09 1 A TYR 287 -151.16 -11.48 1 A ASP 291 -166.90 10.03 PROTEIN_REP.PARAM PROTEIN.TOP DS.PARAM DS.TOP WATER_REP.PARAM WATER.TOP 17.8 0.226 0.003 0.204 0.2041 0.2041 1.45 9.99 5105 51236 50626 10.1 95.9 RANDOM 1 RESTRAINED THROUGHOUT 0.0 FOURIER SYNTHESIS FLAT MODEL 56.2052 0.465542 0.19 0.08 1.45 9.99 353 2531 7 0 2171 0.005 1.2 23.2 0.78 1.06 1.50 1.65 2.00 1.95 2.00 2.71 2.50 0.234 0.009 0.218 1.54 740 6571 6571 6 10.1 84.3 16.3 1.45 20 1PB8 52896 51309 14.06 1 97.0 1.45 1.50 85.2 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS N-methyl-D-aspartate Receptor Subunit 1 CRYSTAL STRUCTURE OF THE NR1 LIGAND BINDING CORE IN COMPLEX WITH D-SERINE AT 1.45 ANGSTROMS RESOLUTION 1 N N 2 N N 3 N N A GLY 65 A GLY 65 HELX_P A MET 78 A MET 78 1 1 14 A ASN 107 A ASN 107 HELX_P A SER 115 A SER 115 1 2 9 A ASN 128 A ASN 128 HELX_P A GLN 133 A GLN 133 1 3 6 A ASP 161 A ASP 161 HELX_P A ASN 166 A ASN 166 1 4 6 A SER 179 A SER 179 HELX_P A ARG 187 A ARG 187 1 5 9 A GLN 188 A GLN 188 HELX_P A GLU 190 A GLU 190 5 6 3 A LEU 191 A LEU 191 HELX_P A GLU 199 A GLU 199 1 7 9 A SER 205 A SER 205 HELX_P A ASP 215 A ASP 215 1 8 11 A SER 225 A SER 225 HELX_P A LYS 235 A LYS 235 1 9 11 A TRP 260 A TRP 260 HELX_P A ASN 274 A ASN 274 1 10 15 A GLY 275 A GLY 275 HELX_P A VAL 285 A VAL 285 1 11 11 disulf 2.038 A CYS 28 A SG CYS 28 1_555 A CYS 62 A SG CYS 62 1_555 disulf 2.033 A CYS 44 A SG CYS 44 1_555 A CYS 63 A SG CYS 63 1_555 disulf 2.026 A CYS 236 A SG CYS 236 1_555 A CYS 290 A SG CYS 290 1_555 LIGAND BINDING PROTEIN Ligand binding receptor; rat; NR1, LIGAND BINDING PROTEIN A GLU 14 A GLU 14 1 A PRO 15 A PRO 15 0.41 NMDZ1_RAT UNP 1 P35439 394 544 1PB8 2 152 P35439 A 1 2 152 663 800 1PB8 155 292 P35439 A 1 155 292 1 GLN CLONING ARTIFACT GLY 1 1PB8 A P35439 UNP 393 1 1 SEE REMARK 999 GLY 153 1PB8 A P35439 UNP 153 1 SEE REMARK 999 THR 154 1PB8 A P35439 UNP 154 6 2 2 4 3 anti-parallel anti-parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A TYR 18 A TYR 18 A PRO 21 A PRO 21 A THR 58 A THR 58 A TYR 64 A TYR 64 A VAL 42 A VAL 42 A PRO 47 A PRO 47 A TYR 82 A TYR 82 A LEU 86 A LEU 86 A LEU 6 A LEU 6 A THR 10 A THR 10 A MET 120 A MET 120 A ILE 121 A ILE 121 A GLN 95 A GLN 95 A ARG 97 A ARG 97 A LYS 104 A LYS 104 A TRP 106 A TRP 106 A ILE 135 A ILE 135 A PHE 137 A PHE 137 A GLY 253 A GLY 253 A ARG 255 A ARG 255 A PHE 246 A PHE 246 A PHE 250 A PHE 250 A LYS 142 A LYS 142 A LYS 151 A LYS 151 A ALA 220 A ALA 220 A ASP 224 A ASP 224 A TYR 173 A TYR 173 A ALA 174 A ALA 174 A PHE 246 A PHE 246 A PHE 250 A PHE 250 A LYS 142 A LYS 142 A LYS 151 A LYS 151 A LEU 238 A LEU 238 A THR 240 A THR 240 BINDING SITE FOR RESIDUE DSN A 901 Software 9 A PHE 92 A PHE 92 9 1_555 A PRO 124 A PRO 124 9 1_555 A THR 126 A THR 126 9 1_555 A ARG 131 A ARG 131 9 1_555 A SER 179 A SER 179 9 1_555 A SER 180 A SER 180 9 1_555 A VAL 181 A VAL 181 9 1_555 A TRP 223 A TRP 223 9 1_555 A ASP 224 A ASP 224 9 1_555 19 orthorhombic P 21 21 21