0.011628
0.000000
0.000000
0.000000
0.011628
0.000000
0.000000
0.000000
0.017986
0.00000
0.00000
0.00000
Liang, J.
Hung, D.T.
Schreiber, S.L.
Clardy, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
86.000
86.000
55.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C51 H79 N O13
914.172
RAPAMYCIN IMMUNOSUPPRESSANT DRUG
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
C
N
291
N
O
N
292
N
O
N
293
S
C
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
N
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
O
N
303
R
C
N
304
N
O
N
305
N
O
N
306
R
C
N
307
N
C
N
308
N
C
N
309
S
C
N
310
N
C
N
311
S
C
N
312
N
O
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
C
N
319
S
C
N
320
N
C
N
321
R
C
N
322
N
C
N
323
N
O
N
324
R
C
N
325
N
O
N
326
R
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
R
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
S
C
N
335
R
C
N
336
N
C
N
337
S
C
N
338
N
C
N
339
R
C
N
340
N
O
N
341
R
C
N
342
N
O
N
343
N
C
N
344
N
C
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
N
439
N
O
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
N
N
449
S
C
N
450
N
C
N
451
N
O
N
452
R
C
N
453
N
O
N
454
N
C
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
N
N
466
S
C
N
467
N
C
N
468
N
O
N
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
N
Y
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
C
N
479
N
O
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
N
N
493
S
C
N
494
N
C
N
495
N
O
N
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
Y
501
N
C
Y
502
N
C
N
503
N
O
N
504
N
O
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
N
N
517
S
C
N
518
N
C
N
519
N
O
N
520
N
C
N
521
N
C
N
522
N
C
N
523
N
O
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
E
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
E
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
E
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
E
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
Y
464
N
doub
Y
465
N
sing
Y
466
N
sing
N
467
N
sing
Y
468
N
doub
Y
469
N
sing
Y
470
N
sing
N
471
N
sing
Y
472
N
sing
Y
473
N
doub
N
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
doub
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
Y
492
N
doub
Y
493
N
sing
Y
494
N
sing
N
495
N
sing
Y
496
N
doub
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
doub
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
118
1231
1232
-1
Structure of the human 25 kDa FK506 binding protein complexed with rapamycin.
1996
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
113
7433
Atomic Structure of the Rapamycin Human Immunophilin Fkbp-12 Complex
1991
10.2210/pdb1pbk/pdb
pdb_00001pbk
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
1993-12-28
XUONG-HAMLIN MULTIWIRE
M
x-ray
1
1.5418
1.0
1.5418
12959.964
FKBP25
FKBP12 HOMOLOGOUS DOMAIN, RESIDUES PRO 109 - ASP 2
1
man
polymer
914.172
RAPAMYCIN IMMUNOSUPPRESSANT DRUG
1
syn
non-polymer
18.015
water
50
nat
water
FKBP25 C-TERMINAL DOMAIN; EC 5.2.1.8
no
no
PKYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKA
RLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID
PKYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKA
RLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
BL21(DE3)
HUMAN HIPPOCAMPAL CDNA LIBRARY
9606
Homo sapiens
HUMAN HIPPOCAMPAL CDNA LIBRARY (CLONTECH, PALO ALTO,CA)
562
Escherichia coli
BL21(DE3) (NOVAGEN)
PGEX-3X
3.96
63.
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1996-10-14
1
1
2008-03-03
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1995-09-01
REL
REL
RAP
RAPAMYCIN IMMUNOSUPPRESSANT DRUG
HOH
water
RECOMBINANT HFKBP25 IS AN UNSTABLE PROTEIN AND DEGRADED
RAPIDLY FOLLOWING THE PURIFICATION. WITH TIME, ONLY A
MIXTURE OF FRAGMENTS WITH MOLECULAR WEIGHTS RANGING FROM
13.7KDA TO 15KDA (MASS RESULT) COULD BE IDENTIFIED IN
THE ORIGINAL FKBP25 SAMPLE. HOWEVER, THE HETEROGENEOUS
SAMPLE OF THE FRAGMENT FKBP25 COULD BE CRYSTALLIZED
AFTER COMPLEXING IT WITH RAPAMYCIN (KD=0.9 NM) AND THE
ELECTRON DENSITY IS COMPOSED OF RESIDUES FROM PRO 109 TO
ASP 224. RESIDUES FROM GLN 150 TO ALA 159 ARE COMPLETELY
DISORDERED; THEREFORE THE MODEL OF THIS REGION IS ONLY
RESTRICTED BY THE DYNAMICS FORCE FIELD AND HAS
RELATIVELY HIGH THERMAL FACTORS.
RAP
225
2
RAP
RAP
225
A
HOH
1
3
HOH
HOH
1
A
HOH
2
3
HOH
HOH
2
A
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
5
3
HOH
HOH
5
A
HOH
6
3
HOH
HOH
6
A
HOH
7
3
HOH
HOH
7
A
HOH
8
3
HOH
HOH
8
A
HOH
9
3
HOH
HOH
9
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
12
3
HOH
HOH
12
A
HOH
13
3
HOH
HOH
13
A
HOH
14
3
HOH
HOH
14
A
HOH
15
3
HOH
HOH
15
A
HOH
16
3
HOH
HOH
16
A
HOH
17
3
HOH
HOH
17
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
22
3
HOH
HOH
22
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
27
3
HOH
HOH
27
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
30
3
HOH
HOH
30
A
HOH
31
3
HOH
HOH
31
A
HOH
32
3
HOH
HOH
32
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
35
3
HOH
HOH
35
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
39
3
HOH
HOH
39
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
43
3
HOH
HOH
43
A
HOH
44
3
HOH
HOH
44
A
HOH
45
3
HOH
HOH
45
A
HOH
46
3
HOH
HOH
46
A
HOH
47
3
HOH
HOH
47
A
HOH
48
3
HOH
HOH
48
A
HOH
49
3
HOH
HOH
49
A
HOH
50
3
HOH
HOH
50
A
PRO
109
n
1
PRO
109
A
LYS
110
n
2
LYS
110
A
TYR
111
n
3
TYR
111
A
THR
112
n
4
THR
112
A
LYS
113
n
5
LYS
113
A
SER
114
n
6
SER
114
A
VAL
115
n
7
VAL
115
A
LEU
116
n
8
LEU
116
A
LYS
117
n
9
LYS
117
A
LYS
118
n
10
LYS
118
A
GLY
119
n
11
GLY
119
A
ASP
120
n
12
ASP
120
A
LYS
121
n
13
LYS
121
A
THR
122
n
14
THR
122
A
ASN
123
n
15
ASN
123
A
PHE
124
n
16
PHE
124
A
PRO
125
n
17
PRO
125
A
LYS
126
n
18
LYS
126
A
LYS
127
n
19
LYS
127
A
GLY
128
n
20
GLY
128
A
ASP
129
n
21
ASP
129
A
VAL
130
n
22
VAL
130
A
VAL
131
n
23
VAL
131
A
HIS
132
n
24
HIS
132
A
CYS
133
n
25
CYS
133
A
TRP
134
n
26
TRP
134
A
TYR
135
n
27
TYR
135
A
THR
136
n
28
THR
136
A
GLY
137
n
29
GLY
137
A
THR
138
n
30
THR
138
A
LEU
139
n
31
LEU
139
A
GLN
140
n
32
GLN
140
A
ASP
141
n
33
ASP
141
A
GLY
142
n
34
GLY
142
A
THR
143
n
35
THR
143
A
VAL
144
n
36
VAL
144
A
PHE
145
n
37
PHE
145
A
ASP
146
n
38
ASP
146
A
THR
147
n
39
THR
147
A
ASN
148
n
40
ASN
148
A
ILE
149
n
41
ILE
149
A
GLN
150
n
42
GLN
150
A
THR
151
n
43
THR
151
A
SER
152
n
44
SER
152
A
ALA
153
n
45
ALA
153
A
LYS
154
n
46
LYS
154
A
LYS
155
n
47
LYS
155
A
LYS
156
n
48
LYS
156
A
LYS
157
n
49
LYS
157
A
ASN
158
n
50
ASN
158
A
ALA
159
n
51
ALA
159
A
LYS
160
n
52
LYS
160
A
PRO
161
n
53
PRO
161
A
LEU
162
n
54
LEU
162
A
SER
163
n
55
SER
163
A
PHE
164
n
56
PHE
164
A
LYS
165
n
57
LYS
165
A
VAL
166
n
58
VAL
166
A
GLY
167
n
59
GLY
167
A
VAL
168
n
60
VAL
168
A
GLY
169
n
61
GLY
169
A
LYS
170
n
62
LYS
170
A
VAL
171
n
63
VAL
171
A
ILE
172
n
64
ILE
172
A
ARG
173
n
65
ARG
173
A
GLY
174
n
66
GLY
174
A
TRP
175
n
67
TRP
175
A
ASP
176
n
68
ASP
176
A
GLU
177
n
69
GLU
177
A
ALA
178
n
70
ALA
178
A
LEU
179
n
71
LEU
179
A
LEU
180
n
72
LEU
180
A
THR
181
n
73
THR
181
A
MET
182
n
74
MET
182
A
SER
183
n
75
SER
183
A
LYS
184
n
76
LYS
184
A
GLY
185
n
77
GLY
185
A
GLU
186
n
78
GLU
186
A
LYS
187
n
79
LYS
187
A
ALA
188
n
80
ALA
188
A
ARG
189
n
81
ARG
189
A
LEU
190
n
82
LEU
190
A
GLU
191
n
83
GLU
191
A
ILE
192
n
84
ILE
192
A
GLU
193
n
85
GLU
193
A
PRO
194
n
86
PRO
194
A
GLU
195
n
87
GLU
195
A
TRP
196
n
88
TRP
196
A
ALA
197
n
89
ALA
197
A
TYR
198
n
90
TYR
198
A
GLY
199
n
91
GLY
199
A
LYS
200
n
92
LYS
200
A
LYS
201
n
93
LYS
201
A
GLY
202
n
94
GLY
202
A
GLN
203
n
95
GLN
203
A
PRO
204
n
96
PRO
204
A
ASP
205
n
97
ASP
205
A
ALA
206
n
98
ALA
206
A
LYS
207
n
99
LYS
207
A
ILE
208
n
100
ILE
208
A
PRO
209
n
101
PRO
209
A
PRO
210
n
102
PRO
210
A
ASN
211
n
103
ASN
211
A
ALA
212
n
104
ALA
212
A
LYS
213
n
105
LYS
213
A
LEU
214
n
106
LEU
214
A
THR
215
n
107
THR
215
A
PHE
216
n
108
PHE
216
A
GLU
217
n
109
GLU
217
A
VAL
218
n
110
VAL
218
A
GLU
219
n
111
GLU
219
A
LEU
220
n
112
LEU
220
A
VAL
221
n
113
VAL
221
A
ASP
222
n
114
ASP
222
A
ILE
223
n
115
ILE
223
A
ASP
224
n
116
ASP
224
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
162
A
O
LEU
54
A
N
CYS
133
A
N
CYS
25
A
O
VAL
130
A
O
VAL
22
A
N
ASP
224
A
N
ASP
116
A
O
LEU
214
A
O
LEU
106
A
N
ILE
192
A
N
ILE
84
A
O
LYS
187
A
O
LYS
79
A
N
LYS
117
A
N
LYS
9
A
O
GLY
137
A
O
GLY
29
A
N
ASP
146
A
N
ASP
38
1
A
A
GLY
ASP
128
129
-145.28
1
A
A
LYS
LYS
154
155
-134.24
1
7.21
0.80
106.30
113.51
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
134
134
134
N
1
-7.87
1.30
127.00
119.13
A
A
A
CB
CG
CD1
TRP
TRP
TRP
134
134
134
N
1
-6.62
0.80
107.30
100.68
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
134
134
134
N
1
7.40
0.80
106.30
113.70
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
175
175
175
N
1
-6.18
0.80
107.30
101.12
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
175
175
175
N
1
5.50
0.80
106.30
111.80
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
196
196
196
N
1
-5.61
0.80
107.30
101.69
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
196
196
196
N
1
A
A
NE2
CD2
HIS
HIS
132
132
-0.069
0.011
1.373
1.304
N
1
A
LYS
110
-99.01
40.99
1
A
ALA
197
-138.55
-111.29
PARAM19X.PRO
TOPH19X.PRO
21.9
0.2430000
0.1850000
0.1850000
2.5
8.0
7539
5.
99.
1
2.0
2.5
8.0
50
1028
65
0
913
0.011
2.89
29.29
1.906
2.5
8.
1PBK
7539
2.
0.0650000
1
4.
99.
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
DENZO
phasing
X-PLOR
3.1
HOMOLOGOUS DOMAIN OF HUMAN FKBP25
1
N
N
2
N
N
3
N
N
A
ARG
173
A
ARG
65
HELX_P
A
THR
181
A
THR
73
1
1
9
A
PRO
194
A
PRO
86
HELX_P
A
TRP
196
A
TRP
88
5
2
3
A
PRO
204
A
PRO
96
HELX_P
A
ALA
206
A
ALA
98
5
3
3
ISOMERASE
FKBP12 HOMOLOGOUS DOMAIN OF HFKBP25, ISOMERASE
A
LYS
155
A
LYS
47
1
A
LYS
156
A
LYS
48
-2.97
A
ASN
158
A
ASN
50
1
A
ALA
159
A
ALA
51
-3.01
FKB3_HUMAN
UNP
1
1
Q00688
MAAAVPQRAWTVEQLRSEQLPKKDIIKFLQEHGSDSFLAEHKLLGNIKNVAKTANKDHLVTAYNHLFETKRFKGTESISK
VSEQVKNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAK
PLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID
109
224
1PBK
109
224
Q00688
A
1
1
116
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
162
A
LEU
54
A
LYS
165
A
LYS
57
A
VAL
130
A
VAL
22
A
THR
138
A
THR
30
A
LEU
214
A
LEU
106
A
ASP
224
A
ASP
116
A
LYS
187
A
LYS
79
A
ILE
192
A
ILE
84
A
TYR
111
A
TYR
3
A
LYS
117
A
LYS
9
A
THR
136
A
THR
28
A
THR
138
A
THR
30
A
VAL
144
A
VAL
36
A
THR
147
A
THR
39
BINDING SITE FOR RESIDUE RAP A 225
A
RAP
225
Software
12
A
HOH
11
C
HOH
12
1_555
A
TYR
135
A
TYR
27
12
1_555
A
PHE
145
A
PHE
37
12
1_555
A
ASP
146
A
ASP
38
12
1_555
A
LEU
162
A
LEU
54
12
1_555
A
GLY
169
A
GLY
61
12
1_555
A
LYS
170
A
LYS
62
12
1_555
A
VAL
171
A
VAL
63
12
1_555
A
ILE
172
A
ILE
64
12
1_555
A
TRP
175
A
TRP
67
12
1_555
A
TYR
198
A
TYR
90
12
1_555
A
GLN
203
A
GLN
95
12
7_556
92
P 41 21 2