0.026505
0.000000
0.000000
0.000000
0.013318
0.000000
0.000000
0.000000
0.006745
0.00000
0.00000
0.00000
Kim, Y.
Joachimiak, A.
Edwards, A.
Skarina, T.
Savchenko, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
37.729
75.084
148.252
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C H2 O2
46.025
FORMIC ACID
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C4 H12 N O3 1
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
The crystal structure analysis of TM1154, oxidoreductase from Thermotoga maritima
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirror
CCD
2003-04-20
SBC-2
double crystal, Si-111
MAD
M
x-ray
1
0.97932
1.0
0.97952
1.0
0.946
1.0
19-ID
APS
0.97932, 0.97952, 0.946
SYNCHROTRON
APS BEAMLINE 19-ID
28261.623
6-phosphogluconolactonase
3.1.1.31
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
46.025
FORMIC ACID
1
syn
non-polymer
18.015
water
330
nat
water
TM1154 protein
no
yes
(MSE)GSSHHHHHHSSGRENLYFQGH(MSE)EKTVIYLLEDGYVDFVVEKIRTK(MSE)EKLLEEKDKIFVVLAGGRTPL
PVYEKLAEQKFPWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSATDQF
DLAILG(MSE)GPDGHVASIFDLETGNKDNLVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTP
LPAYFVRGKEKTVWFVGKGS
MGSSHHHHHHSSGRENLYFQGHMEKTVIYLLEDGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGRTPLPVYEKLAEQKFP
WNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSATDQFDLAILGMGPDGH
VASIFDLETGNKDNLVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTPLPAYFVRGKEKTVWFV
GKGS
A
APC4602
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermotoga
Escherichia
sample
2336
Thermotoga maritima
562
Escherichia coli
1
1.86
33.75
VAPOR DIFFUSION, HANGING DROP
8.0
PEG MME 5000, ammonium sulfate, Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
repository
Initial release
Version format compliance
Version format compliance
1
0
2003-09-23
1
1
2008-04-29
1
2
2011-07-13
Y
RCSB
Y
RCSB
2003-05-15
REL
REL
SO4
SULFATE ION
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
EDO
1,2-ETHANEDIOL
FMT
FORMIC ACID
HOH
water
SO4
302
2
SO4
SO4
302
A
SO4
303
2
SO4
SO4
303
A
TMN
301
3
TRS
TRS
301
A
EDO
304
4
EDO
EDO
304
A
FMT
305
5
FMT
FMT
305
A
HOH
1
6
HOH
HOH
306
A
HOH
2
6
HOH
HOH
307
A
HOH
3
6
HOH
HOH
308
A
HOH
4
6
HOH
HOH
309
A
HOH
5
6
HOH
HOH
310
A
HOH
6
6
HOH
HOH
311
A
HOH
7
6
HOH
HOH
312
A
HOH
8
6
HOH
HOH
313
A
HOH
9
6
HOH
HOH
314
A
HOH
10
6
HOH
HOH
315
A
HOH
11
6
HOH
HOH
316
A
HOH
12
6
HOH
HOH
317
A
HOH
13
6
HOH
HOH
318
A
HOH
14
6
HOH
HOH
319
A
HOH
15
6
HOH
HOH
320
A
HOH
16
6
HOH
HOH
321
A
HOH
17
6
HOH
HOH
322
A
HOH
18
6
HOH
HOH
323
A
HOH
19
6
HOH
HOH
324
A
HOH
20
6
HOH
HOH
325
A
HOH
21
6
HOH
HOH
326
A
HOH
22
6
HOH
HOH
327
A
HOH
23
6
HOH
HOH
328
A
HOH
24
6
HOH
HOH
329
A
HOH
25
6
HOH
HOH
330
A
HOH
26
6
HOH
HOH
331
A
HOH
27
6
HOH
HOH
332
A
HOH
28
6
HOH
HOH
333
A
HOH
29
6
HOH
HOH
334
A
HOH
30
6
HOH
HOH
335
A
HOH
31
6
HOH
HOH
336
A
HOH
32
6
HOH
HOH
337
A
HOH
33
6
HOH
HOH
338
A
HOH
34
6
HOH
HOH
339
A
HOH
35
6
HOH
HOH
340
A
HOH
36
6
HOH
HOH
341
A
HOH
37
6
HOH
HOH
342
A
HOH
38
6
HOH
HOH
343
A
HOH
39
6
HOH
HOH
344
A
HOH
40
6
HOH
HOH
345
A
HOH
41
6
HOH
HOH
346
A
HOH
42
6
HOH
HOH
347
A
HOH
43
6
HOH
HOH
348
A
HOH
44
6
HOH
HOH
349
A
HOH
45
6
HOH
HOH
350
A
HOH
46
6
HOH
HOH
351
A
HOH
47
6
HOH
HOH
352
A
HOH
48
6
HOH
HOH
353
A
HOH
49
6
HOH
HOH
354
A
HOH
50
6
HOH
HOH
355
A
HOH
51
6
HOH
HOH
356
A
HOH
52
6
HOH
HOH
357
A
HOH
53
6
HOH
HOH
358
A
HOH
54
6
HOH
HOH
359
A
HOH
55
6
HOH
HOH
360
A
HOH
56
6
HOH
HOH
361
A
HOH
57
6
HOH
HOH
362
A
HOH
58
6
HOH
HOH
363
A
HOH
59
6
HOH
HOH
364
A
HOH
60
6
HOH
HOH
365
A
HOH
61
6
HOH
HOH
366
A
HOH
62
6
HOH
HOH
367
A
HOH
63
6
HOH
HOH
368
A
HOH
64
6
HOH
HOH
369
A
HOH
65
6
HOH
HOH
370
A
HOH
66
6
HOH
HOH
371
A
HOH
67
6
HOH
HOH
372
A
HOH
68
6
HOH
HOH
373
A
HOH
69
6
HOH
HOH
374
A
HOH
70
6
HOH
HOH
375
A
HOH
71
6
HOH
HOH
376
A
HOH
72
6
HOH
HOH
377
A
HOH
73
6
HOH
HOH
378
A
HOH
74
6
HOH
HOH
379
A
HOH
75
6
HOH
HOH
380
A
HOH
76
6
HOH
HOH
381
A
HOH
77
6
HOH
HOH
382
A
HOH
78
6
HOH
HOH
383
A
HOH
79
6
HOH
HOH
384
A
HOH
80
6
HOH
HOH
385
A
HOH
81
6
HOH
HOH
386
A
HOH
82
6
HOH
HOH
387
A
HOH
83
6
HOH
HOH
388
A
HOH
84
6
HOH
HOH
389
A
HOH
85
6
HOH
HOH
390
A
HOH
86
6
HOH
HOH
391
A
HOH
87
6
HOH
HOH
392
A
HOH
88
6
HOH
HOH
393
A
HOH
89
6
HOH
HOH
394
A
HOH
90
6
HOH
HOH
395
A
HOH
91
6
HOH
HOH
396
A
HOH
92
6
HOH
HOH
397
A
HOH
93
6
HOH
HOH
398
A
HOH
94
6
HOH
HOH
399
A
HOH
95
6
HOH
HOH
400
A
HOH
96
6
HOH
HOH
401
A
HOH
97
6
HOH
HOH
402
A
HOH
98
6
HOH
HOH
403
A
HOH
99
6
HOH
HOH
404
A
HOH
100
6
HOH
HOH
405
A
HOH
101
6
HOH
HOH
406
A
HOH
102
6
HOH
HOH
407
A
HOH
103
6
HOH
HOH
408
A
HOH
104
6
HOH
HOH
409
A
HOH
105
6
HOH
HOH
410
A
HOH
106
6
HOH
HOH
411
A
HOH
107
6
HOH
HOH
412
A
HOH
108
6
HOH
HOH
413
A
HOH
109
6
HOH
HOH
414
A
HOH
110
6
HOH
HOH
415
A
HOH
111
6
HOH
HOH
416
A
HOH
112
6
HOH
HOH
417
A
HOH
113
6
HOH
HOH
418
A
HOH
114
6
HOH
HOH
419
A
HOH
115
6
HOH
HOH
420
A
HOH
116
6
HOH
HOH
421
A
HOH
117
6
HOH
HOH
422
A
HOH
118
6
HOH
HOH
423
A
HOH
119
6
HOH
HOH
424
A
HOH
120
6
HOH
HOH
425
A
HOH
121
6
HOH
HOH
426
A
HOH
122
6
HOH
HOH
427
A
HOH
123
6
HOH
HOH
428
A
HOH
124
6
HOH
HOH
429
A
HOH
125
6
HOH
HOH
430
A
HOH
126
6
HOH
HOH
431
A
HOH
127
6
HOH
HOH
432
A
HOH
128
6
HOH
HOH
433
A
HOH
129
6
HOH
HOH
434
A
HOH
130
6
HOH
HOH
435
A
HOH
131
6
HOH
HOH
436
A
HOH
132
6
HOH
HOH
437
A
HOH
133
6
HOH
HOH
438
A
HOH
134
6
HOH
HOH
439
A
HOH
135
6
HOH
HOH
440
A
HOH
136
6
HOH
HOH
441
A
HOH
137
6
HOH
HOH
442
A
HOH
138
6
HOH
HOH
443
A
HOH
139
6
HOH
HOH
444
A
HOH
140
6
HOH
HOH
445
A
HOH
141
6
HOH
HOH
446
A
HOH
142
6
HOH
HOH
447
A
HOH
143
6
HOH
HOH
448
A
HOH
144
6
HOH
HOH
449
A
HOH
145
6
HOH
HOH
450
A
HOH
146
6
HOH
HOH
451
A
HOH
147
6
HOH
HOH
452
A
HOH
148
6
HOH
HOH
453
A
HOH
149
6
HOH
HOH
454
A
HOH
150
6
HOH
HOH
455
A
HOH
151
6
HOH
HOH
456
A
HOH
152
6
HOH
HOH
457
A
HOH
153
6
HOH
HOH
458
A
HOH
154
6
HOH
HOH
459
A
HOH
155
6
HOH
HOH
460
A
HOH
156
6
HOH
HOH
461
A
HOH
157
6
HOH
HOH
462
A
HOH
158
6
HOH
HOH
463
A
HOH
159
6
HOH
HOH
464
A
HOH
160
6
HOH
HOH
465
A
HOH
161
6
HOH
HOH
466
A
HOH
162
6
HOH
HOH
467
A
HOH
163
6
HOH
HOH
468
A
HOH
164
6
HOH
HOH
469
A
HOH
165
6
HOH
HOH
470
A
HOH
166
6
HOH
HOH
471
A
HOH
167
6
HOH
HOH
472
A
HOH
168
6
HOH
HOH
473
A
HOH
169
6
HOH
HOH
474
A
HOH
170
6
HOH
HOH
475
A
HOH
171
6
HOH
HOH
476
A
HOH
172
6
HOH
HOH
477
A
HOH
173
6
HOH
HOH
478
A
HOH
174
6
HOH
HOH
479
A
HOH
175
6
HOH
HOH
480
A
HOH
176
6
HOH
HOH
481
A
HOH
177
6
HOH
HOH
482
A
HOH
178
6
HOH
HOH
483
A
HOH
179
6
HOH
HOH
484
A
HOH
180
6
HOH
HOH
485
A
HOH
181
6
HOH
HOH
486
A
HOH
182
6
HOH
HOH
487
A
HOH
183
6
HOH
HOH
488
A
HOH
184
6
HOH
HOH
489
A
HOH
185
6
HOH
HOH
490
A
HOH
186
6
HOH
HOH
491
A
HOH
187
6
HOH
HOH
492
A
HOH
188
6
HOH
HOH
493
A
HOH
189
6
HOH
HOH
494
A
HOH
190
6
HOH
HOH
495
A
HOH
191
6
HOH
HOH
496
A
HOH
192
6
HOH
HOH
497
A
HOH
193
6
HOH
HOH
498
A
HOH
194
6
HOH
HOH
499
A
HOH
195
6
HOH
HOH
500
A
HOH
196
6
HOH
HOH
501
A
HOH
197
6
HOH
HOH
502
A
HOH
198
6
HOH
HOH
503
A
HOH
199
6
HOH
HOH
504
A
HOH
200
6
HOH
HOH
505
A
HOH
201
6
HOH
HOH
506
A
HOH
202
6
HOH
HOH
507
A
HOH
203
6
HOH
HOH
508
A
HOH
204
6
HOH
HOH
509
A
HOH
205
6
HOH
HOH
510
A
HOH
206
6
HOH
HOH
511
A
HOH
207
6
HOH
HOH
512
A
HOH
208
6
HOH
HOH
513
A
HOH
209
6
HOH
HOH
514
A
HOH
210
6
HOH
HOH
515
A
HOH
211
6
HOH
HOH
516
A
HOH
212
6
HOH
HOH
517
A
HOH
213
6
HOH
HOH
518
A
HOH
214
6
HOH
HOH
519
A
HOH
215
6
HOH
HOH
520
A
HOH
216
6
HOH
HOH
521
A
HOH
217
6
HOH
HOH
522
A
HOH
218
6
HOH
HOH
523
A
HOH
219
6
HOH
HOH
524
A
HOH
220
6
HOH
HOH
525
A
HOH
221
6
HOH
HOH
526
A
HOH
222
6
HOH
HOH
527
A
HOH
223
6
HOH
HOH
528
A
HOH
224
6
HOH
HOH
529
A
HOH
225
6
HOH
HOH
530
A
HOH
226
6
HOH
HOH
531
A
HOH
227
6
HOH
HOH
532
A
HOH
228
6
HOH
HOH
533
A
HOH
229
6
HOH
HOH
534
A
HOH
230
6
HOH
HOH
535
A
HOH
231
6
HOH
HOH
536
A
HOH
232
6
HOH
HOH
537
A
HOH
233
6
HOH
HOH
538
A
HOH
234
6
HOH
HOH
539
A
HOH
235
6
HOH
HOH
540
A
HOH
236
6
HOH
HOH
541
A
HOH
237
6
HOH
HOH
542
A
HOH
238
6
HOH
HOH
543
A
HOH
239
6
HOH
HOH
544
A
HOH
240
6
HOH
HOH
545
A
HOH
241
6
HOH
HOH
546
A
HOH
242
6
HOH
HOH
547
A
HOH
243
6
HOH
HOH
548
A
HOH
244
6
HOH
HOH
549
A
HOH
245
6
HOH
HOH
550
A
HOH
246
6
HOH
HOH
551
A
HOH
247
6
HOH
HOH
552
A
HOH
248
6
HOH
HOH
553
A
HOH
249
6
HOH
HOH
554
A
HOH
250
6
HOH
HOH
555
A
HOH
251
6
HOH
HOH
556
A
HOH
252
6
HOH
HOH
557
A
HOH
253
6
HOH
HOH
558
A
HOH
254
6
HOH
HOH
559
A
HOH
255
6
HOH
HOH
560
A
HOH
256
6
HOH
HOH
561
A
HOH
257
6
HOH
HOH
562
A
HOH
258
6
HOH
HOH
563
A
HOH
259
6
HOH
HOH
564
A
HOH
260
6
HOH
HOH
565
A
HOH
261
6
HOH
HOH
566
A
HOH
262
6
HOH
HOH
567
A
HOH
263
6
HOH
HOH
568
A
HOH
264
6
HOH
HOH
569
A
HOH
265
6
HOH
HOH
570
A
HOH
266
6
HOH
HOH
571
A
HOH
267
6
HOH
HOH
572
A
HOH
268
6
HOH
HOH
573
A
HOH
269
6
HOH
HOH
574
A
HOH
270
6
HOH
HOH
575
A
HOH
271
6
HOH
HOH
576
A
HOH
272
6
HOH
HOH
577
A
HOH
273
6
HOH
HOH
578
A
HOH
274
6
HOH
HOH
579
A
HOH
275
6
HOH
HOH
580
A
HOH
276
6
HOH
HOH
581
A
HOH
277
6
HOH
HOH
582
A
HOH
278
6
HOH
HOH
583
A
HOH
279
6
HOH
HOH
584
A
HOH
280
6
HOH
HOH
585
A
HOH
281
6
HOH
HOH
586
A
HOH
282
6
HOH
HOH
587
A
HOH
283
6
HOH
HOH
588
A
HOH
284
6
HOH
HOH
589
A
HOH
285
6
HOH
HOH
590
A
HOH
286
6
HOH
HOH
591
A
HOH
287
6
HOH
HOH
592
A
HOH
288
6
HOH
HOH
593
A
HOH
289
6
HOH
HOH
594
A
HOH
290
6
HOH
HOH
595
A
HOH
291
6
HOH
HOH
596
A
HOH
292
6
HOH
HOH
597
A
HOH
293
6
HOH
HOH
598
A
HOH
294
6
HOH
HOH
599
A
HOH
295
6
HOH
HOH
600
A
HOH
296
6
HOH
HOH
601
A
HOH
297
6
HOH
HOH
602
A
HOH
298
6
HOH
HOH
603
A
HOH
299
6
HOH
HOH
604
A
HOH
300
6
HOH
HOH
605
A
HOH
306
6
HOH
HOH
606
A
HOH
307
6
HOH
HOH
607
A
HOH
308
6
HOH
HOH
608
A
HOH
309
6
HOH
HOH
609
A
HOH
310
6
HOH
HOH
610
A
HOH
311
6
HOH
HOH
611
A
HOH
312
6
HOH
HOH
612
A
HOH
313
6
HOH
HOH
613
A
HOH
314
6
HOH
HOH
614
A
HOH
315
6
HOH
HOH
615
A
HOH
316
6
HOH
HOH
616
A
HOH
317
6
HOH
HOH
617
A
HOH
318
6
HOH
HOH
618
A
HOH
319
6
HOH
HOH
619
A
HOH
320
6
HOH
HOH
620
A
HOH
321
6
HOH
HOH
621
A
HOH
322
6
HOH
HOH
622
A
HOH
323
6
HOH
HOH
623
A
HOH
324
6
HOH
HOH
624
A
HOH
325
6
HOH
HOH
625
A
HOH
326
6
HOH
HOH
626
A
HOH
327
6
HOH
HOH
627
A
HOH
328
6
HOH
HOH
628
A
HOH
329
6
HOH
HOH
629
A
HOH
330
6
HOH
HOH
630
A
HOH
331
6
HOH
HOH
631
A
HOH
332
6
HOH
HOH
632
A
HOH
333
6
HOH
HOH
633
A
HOH
334
6
HOH
HOH
634
A
HOH
335
6
HOH
HOH
635
A
n
1
-21
A
n
2
-20
A
n
3
-19
A
n
4
-18
A
n
5
-17
A
n
6
-16
A
n
7
-15
A
n
8
-14
A
n
9
-13
A
n
10
-12
A
n
11
-11
A
n
12
-10
A
n
13
-9
A
n
14
-8
A
n
15
-7
A
n
16
-6
A
n
17
-5
A
n
18
-4
A
n
19
-3
A
n
20
-2
A
n
21
-1
A
n
22
0
A
MSE
1
n
23
MSE
1
A
GLU
2
n
24
GLU
2
A
LYS
3
n
25
LYS
3
A
THR
4
n
26
THR
4
A
VAL
5
n
27
VAL
5
A
ILE
6
n
28
ILE
6
A
TYR
7
n
29
TYR
7
A
LEU
8
n
30
LEU
8
A
LEU
9
n
31
LEU
9
A
GLU
10
n
32
GLU
10
A
ASP
11
n
33
ASP
11
A
GLY
12
n
34
GLY
12
A
TYR
13
n
35
TYR
13
A
VAL
14
n
36
VAL
14
A
ASP
15
n
37
ASP
15
A
PHE
16
n
38
PHE
16
A
VAL
17
n
39
VAL
17
A
VAL
18
n
40
VAL
18
A
GLU
19
n
41
GLU
19
A
LYS
20
n
42
LYS
20
A
ILE
21
n
43
ILE
21
A
ARG
22
n
44
ARG
22
A
THR
23
n
45
THR
23
A
LYS
24
n
46
LYS
24
A
MSE
25
n
47
MSE
25
A
GLU
26
n
48
GLU
26
A
LYS
27
n
49
LYS
27
A
LEU
28
n
50
LEU
28
A
LEU
29
n
51
LEU
29
A
GLU
30
n
52
GLU
30
A
GLU
31
n
53
GLU
31
A
LYS
32
n
54
LYS
32
A
ASP
33
n
55
ASP
33
A
LYS
34
n
56
LYS
34
A
ILE
35
n
57
ILE
35
A
PHE
36
n
58
PHE
36
A
VAL
37
n
59
VAL
37
A
VAL
38
n
60
VAL
38
A
LEU
39
n
61
LEU
39
A
ALA
40
n
62
ALA
40
A
GLY
41
n
63
GLY
41
A
GLY
42
n
64
GLY
42
A
ARG
43
n
65
ARG
43
A
THR
44
n
66
THR
44
A
PRO
45
n
67
PRO
45
A
LEU
46
n
68
LEU
46
A
PRO
47
n
69
PRO
47
A
VAL
48
n
70
VAL
48
A
TYR
49
n
71
TYR
49
A
GLU
50
n
72
GLU
50
A
LYS
51
n
73
LYS
51
A
LEU
52
n
74
LEU
52
A
ALA
53
n
75
ALA
53
A
GLU
54
n
76
GLU
54
A
GLN
55
n
77
GLN
55
A
LYS
56
n
78
LYS
56
A
PHE
57
n
79
PHE
57
A
PRO
58
n
80
PRO
58
A
TRP
59
n
81
TRP
59
A
ASN
60
n
82
ASN
60
A
ARG
61
n
83
ARG
61
A
ILE
62
n
84
ILE
62
A
HIS
63
n
85
HIS
63
A
PHE
64
n
86
PHE
64
A
PHE
65
n
87
PHE
65
A
LEU
66
n
88
LEU
66
A
SER
67
n
89
SER
67
A
ASP
68
n
90
ASP
68
A
GLU
69
n
91
GLU
69
A
ARG
70
n
92
ARG
70
A
TYR
71
n
93
TYR
71
A
VAL
72
n
94
VAL
72
A
PRO
73
n
95
PRO
73
A
LEU
74
n
96
LEU
74
A
ASP
75
n
97
ASP
75
A
SER
76
n
98
SER
76
A
ASP
77
n
99
ASP
77
A
GLN
78
n
100
GLN
78
A
SER
79
n
101
SER
79
A
ASN
80
n
102
ASN
80
A
PHE
81
n
103
PHE
81
A
ARG
82
n
104
ARG
82
A
ASN
83
n
105
ASN
83
A
ILE
84
n
106
ILE
84
A
ASN
85
n
107
ASN
85
A
GLU
86
n
108
GLU
86
A
VAL
87
n
109
VAL
87
A
LEU
88
n
110
LEU
88
A
PHE
89
n
111
PHE
89
A
SER
90
n
112
SER
90
A
ARG
91
n
113
ARG
91
A
ALA
92
n
114
ALA
92
A
LYS
93
n
115
LYS
93
A
ILE
94
n
116
ILE
94
A
PRO
95
n
117
PRO
95
A
SER
96
n
118
SER
96
A
GLY
97
n
119
GLY
97
A
ASN
98
n
120
ASN
98
A
VAL
99
n
121
VAL
99
A
HIS
100
n
122
HIS
100
A
TYR
101
n
123
TYR
101
A
VAL
102
n
124
VAL
102
A
ASP
103
n
125
ASP
103
A
THR
104
n
126
THR
104
A
SER
105
n
127
SER
105
A
LEU
106
n
128
LEU
106
A
PRO
107
n
129
PRO
107
A
ILE
108
n
130
ILE
108
A
GLU
109
n
131
GLU
109
A
LYS
110
n
132
LYS
110
A
ALA
111
n
133
ALA
111
A
CYS
112
n
134
CYS
112
A
GLU
113
n
135
GLU
113
A
LYS
114
n
136
LYS
114
A
TYR
115
n
137
TYR
115
A
GLU
116
n
138
GLU
116
A
ARG
117
n
139
ARG
117
A
GLU
118
n
140
GLU
118
A
ILE
119
n
141
ILE
119
A
ARG
120
n
142
ARG
120
A
SER
121
n
143
SER
121
A
ALA
122
n
144
ALA
122
A
THR
123
n
145
THR
123
A
ASP
124
n
146
ASP
124
A
GLN
125
n
147
GLN
125
A
PHE
126
n
148
PHE
126
A
ASP
127
n
149
ASP
127
A
LEU
128
n
150
LEU
128
A
ALA
129
n
151
ALA
129
A
ILE
130
n
152
ILE
130
A
LEU
131
n
153
LEU
131
A
GLY
132
n
154
GLY
132
A
MSE
133
n
155
MSE
133
A
GLY
134
n
156
GLY
134
A
PRO
135
n
157
PRO
135
A
ASP
136
n
158
ASP
136
A
GLY
137
n
159
GLY
137
A
HIS
138
n
160
HIS
138
A
VAL
139
n
161
VAL
139
A
ALA
140
n
162
ALA
140
A
SER
141
n
163
SER
141
A
ILE
142
n
164
ILE
142
A
PHE
143
n
165
PHE
143
A
ASP
144
n
166
ASP
144
A
LEU
145
n
167
LEU
145
A
GLU
146
n
168
GLU
146
A
THR
147
n
169
THR
147
A
GLY
148
n
170
GLY
148
A
ASN
149
n
171
ASN
149
A
LYS
150
n
172
LYS
150
A
ASP
151
n
173
ASP
151
A
ASN
152
n
174
ASN
152
A
LEU
153
n
175
LEU
153
A
VAL
154
n
176
VAL
154
A
THR
155
n
177
THR
155
A
PHE
156
n
178
PHE
156
A
THR
157
n
179
THR
157
A
ASP
158
n
180
ASP
158
A
PRO
159
n
181
PRO
159
A
SER
160
n
182
SER
160
A
GLY
161
n
183
GLY
161
A
ASP
162
n
184
ASP
162
A
CPR
163
n
185
PRO
163
A
LYS
164
n
186
LYS
164
A
VAL
165
n
187
VAL
165
A
PRO
166
n
188
PRO
166
A
ARG
167
n
189
ARG
167
A
VAL
168
n
190
VAL
168
A
THR
169
n
191
THR
169
A
LEU
170
n
192
LEU
170
A
THR
171
n
193
THR
171
A
PHE
172
n
194
PHE
172
A
ARG
173
n
195
ARG
173
A
ALA
174
n
196
ALA
174
A
LEU
175
n
197
LEU
175
A
ASN
176
n
198
ASN
176
A
THR
177
n
199
THR
177
A
SER
178
n
200
SER
178
A
LEU
179
n
201
LEU
179
A
TYR
180
n
202
TYR
180
A
VAL
181
n
203
VAL
181
A
LEU
182
n
204
LEU
182
A
PHE
183
n
205
PHE
183
A
LEU
184
n
206
LEU
184
A
ILE
185
n
207
ILE
185
A
ARG
186
n
208
ARG
186
A
GLY
187
n
209
GLY
187
A
LYS
188
n
210
LYS
188
A
GLU
189
n
211
GLU
189
A
LYS
190
n
212
LYS
190
A
ILE
191
n
213
ILE
191
A
ASN
192
n
214
ASN
192
A
ARG
193
n
215
ARG
193
A
LEU
194
n
216
LEU
194
A
THR
195
n
217
THR
195
A
GLU
196
n
218
GLU
196
A
ILE
197
n
219
ILE
197
A
LEU
198
n
220
LEU
198
A
LYS
199
n
221
LYS
199
A
ASP
200
n
222
ASP
200
A
THR
201
n
223
THR
201
A
PRO
202
n
224
PRO
202
A
LEU
203
n
225
LEU
203
A
PRO
204
n
226
PRO
204
A
ALA
205
n
227
ALA
205
A
TYR
206
n
228
TYR
206
A
PHE
207
n
229
PHE
207
A
VAL
208
n
230
VAL
208
A
ARG
209
n
231
ARG
209
A
GLY
210
n
232
GLY
210
A
LYS
211
n
233
LYS
211
A
GLU
212
n
234
GLU
212
A
LYS
213
n
235
LYS
213
A
THR
214
n
236
THR
214
A
VAL
215
n
237
VAL
215
A
TRP
216
n
238
TRP
216
A
PHE
217
n
239
PHE
217
A
VAL
218
n
240
VAL
218
A
GLY
219
n
241
GLY
219
A
LYS
220
n
242
LYS
220
A
n
243
221
A
n
244
222
A
author_defined_assembly
1
monomeric
A
MSE
1
SELENOMETHIONINE
A
MSE
23
MET
A
MSE
25
SELENOMETHIONINE
A
MSE
47
MET
A
MSE
133
SELENOMETHIONINE
A
MSE
155
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
7
A
N
TYR
29
A
O
VAL
218
A
O
VAL
240
A
O
PHE
217
A
O
PHE
239
A
N
PHE
183
A
N
PHE
205
A
O
LEU
182
A
O
LEU
204
A
N
LEU
131
A
N
LEU
153
A
O
ILE
130
A
O
ILE
152
A
N
VAL
38
A
N
VAL
60
A
N
VAL
37
A
N
VAL
59
A
O
HIS
63
A
O
HIS
85
A
N
PHE
64
A
N
PHE
86
A
O
HIS
100
A
O
HIS
122
A
N
GLU
69
A
N
GLU
91
A
O
VAL
168
A
O
VAL
190
A
O
THR
169
A
O
THR
191
A
N
THR
155
A
N
THR
177
1
A
MSE
-21
A
MSE
1
1
Y
1
A
GLY
-20
A
GLY
2
1
Y
1
A
SER
-19
A
SER
3
1
Y
1
A
SER
-18
A
SER
4
1
Y
1
A
HIS
-17
A
HIS
5
1
Y
1
A
HIS
-16
A
HIS
6
1
Y
1
A
HIS
-15
A
HIS
7
1
Y
1
A
HIS
-14
A
HIS
8
1
Y
1
A
HIS
-13
A
HIS
9
1
Y
1
A
HIS
-12
A
HIS
10
1
Y
1
A
SER
-11
A
SER
11
1
Y
1
A
SER
-10
A
SER
12
1
Y
1
A
GLY
-9
A
GLY
13
1
Y
1
A
ARG
-8
A
ARG
14
1
Y
1
A
GLU
-7
A
GLU
15
1
Y
1
A
ASN
-6
A
ASN
16
1
Y
1
A
LEU
-5
A
LEU
17
1
Y
1
A
TYR
-4
A
TYR
18
1
Y
1
A
PHE
-3
A
PHE
19
1
Y
1
A
GLN
-2
A
GLN
20
1
Y
1
A
GLY
-1
A
GLY
21
1
Y
1
A
HIS
0
A
HIS
22
1
Y
1
A
GLY
221
A
GLY
243
1
Y
1
A
SER
222
A
SER
244
1
Y
1
A
A
NZ
O
LYS
HOH
32
378
2.12
1
A
A
O
O
HOH
HOH
395
479
2.19
1
A
LEU
88
-133.04
-62.42
1
A
ALA
140
51.81
-127.11
1
A
PRO
202
-69.46
47.58
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
LIGAND.PARAM
LIGAND.TOP
TMN.PARAM
TMN.TOP
16.7
0.47
0.00
0.00
3.85
0.00
-4.32
0.225
0.005
0.179
0.183
0.179
1.70
24.94
2163
21766
21766
9.9
92.4
RANDOM
263854.87
263854.87
0
1
RESTRAINED
THROUGHOUT
0.0
MAD
Engh & Huber
FLAT MODEL
50.58
0.352069
0.22
0.17
5
0.18
0.12
1.70
24.94
333
2159
22
0
1804
0.015
1.8
22.8
2.72
1.36
1.50
2.16
2.00
2.32
2.00
3.55
2.50
0.287
0.018
0.217
1.81
259
2134
2134
6
10.8
61.9
13.3
1.7
50
1PBT
22136
22136
0.0
0.0
0.091
1
7.7
7.2
94.1
0.279
1.7
1.76
3.0
1476
5.1
64.6
refinement
CNS
1.1
data reduction
d*TREK
data reduction
HKL-2000
data scaling
HKL-2000
phasing
SOLVE
phasing
RESOLVE
model building
ARP/wARP
6-phosphogluconolactonase (E.C.3.1.1.31)
The crystal structure of TM1154, oxidoreductase, sol/devB family from Thermotoga maritima
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
GLY
12
A
GLY
34
HELX_P
A
LYS
32
A
LYS
54
1
1
21
A
THR
44
A
THR
66
HELX_P
A
ALA
53
A
ALA
75
1
2
10
A
PRO
58
A
PRO
80
HELX_P
A
ASN
60
A
ASN
82
5
3
3
A
SER
79
A
SER
101
HELX_P
A
LEU
88
A
LEU
110
1
4
10
A
PRO
95
A
PRO
117
HELX_P
A
GLY
97
A
GLY
119
5
5
3
A
PRO
107
A
PRO
129
HELX_P
A
THR
123
A
THR
145
1
6
17
A
ASP
144
A
ASP
166
HELX_P
A
ASN
149
A
ASN
171
1
7
6
A
THR
171
A
THR
193
HELX_P
A
ASN
176
A
ASN
198
1
8
6
A
GLY
187
A
GLY
209
HELX_P
A
LYS
199
A
LYS
221
1
9
13
A
LEU
203
A
LEU
225
HELX_P
A
VAL
208
A
VAL
230
5
10
6
covale
1.333
A
MSE
1
A
C
MSE
23
1_555
A
GLU
2
A
N
GLU
24
1_555
covale
1.331
A
LYS
24
A
C
LYS
46
1_555
A
MSE
25
A
N
MSE
47
1_555
covale
1.328
A
MSE
25
A
C
MSE
47
1_555
A
GLU
26
A
N
GLU
48
1_555
covale
1.325
A
GLY
132
A
C
GLY
154
1_555
A
MSE
133
A
N
MSE
155
1_555
covale
1.327
A
MSE
133
A
C
MSE
155
1_555
A
GLY
134
A
N
GLY
156
1_555
HYDROLASE, OXIDOREDUCTASE
Structural genomics, alpha-beta, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, HYDROLASE, OXIDOREDUCTASE
A
ASP
162
A
ASP
184
1
A
PRO
163
A
PRO
185
0.26
6PGL_THEMA
UNP
1
1
Q9X0N8
MEKTVIYLLEDGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGRTPLPVYEKLAEQKFPWNRIHFFLSDERYVPLDSDQSN
FRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSATDQFDLAILGMGPDGHVASIFDLETGNKDNLVTFTDPS
GDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDTPLPAYFVRGKEKTVWFVGK
1
220
1PBT
1
220
Q9X0N8
A
1
23
242
1
CLONING ARTIFACT
MSE
-21
1PBT
A
Q9X0N8
UNP
1
1
CLONING ARTIFACT
GLY
-20
1PBT
A
Q9X0N8
UNP
2
1
CLONING ARTIFACT
SER
-19
1PBT
A
Q9X0N8
UNP
3
1
CLONING ARTIFACT
SER
-18
1PBT
A
Q9X0N8
UNP
4
1
CLONING ARTIFACT
HIS
-17
1PBT
A
Q9X0N8
UNP
5
1
CLONING ARTIFACT
HIS
-16
1PBT
A
Q9X0N8
UNP
6
1
CLONING ARTIFACT
HIS
-15
1PBT
A
Q9X0N8
UNP
7
1
CLONING ARTIFACT
HIS
-14
1PBT
A
Q9X0N8
UNP
8
1
CLONING ARTIFACT
HIS
-13
1PBT
A
Q9X0N8
UNP
9
1
CLONING ARTIFACT
HIS
-12
1PBT
A
Q9X0N8
UNP
10
1
CLONING ARTIFACT
SER
-11
1PBT
A
Q9X0N8
UNP
11
1
CLONING ARTIFACT
SER
-10
1PBT
A
Q9X0N8
UNP
12
1
CLONING ARTIFACT
GLY
-9
1PBT
A
Q9X0N8
UNP
13
1
CLONING ARTIFACT
ARG
-8
1PBT
A
Q9X0N8
UNP
14
1
CLONING ARTIFACT
GLU
-7
1PBT
A
Q9X0N8
UNP
15
1
CLONING ARTIFACT
ASN
-6
1PBT
A
Q9X0N8
UNP
16
1
CLONING ARTIFACT
LEU
-5
1PBT
A
Q9X0N8
UNP
17
1
CLONING ARTIFACT
TYR
-4
1PBT
A
Q9X0N8
UNP
18
1
CLONING ARTIFACT
PHE
-3
1PBT
A
Q9X0N8
UNP
19
1
CLONING ARTIFACT
GLN
-2
1PBT
A
Q9X0N8
UNP
20
1
CLONING ARTIFACT
GLY
-1
1PBT
A
Q9X0N8
UNP
21
1
CLONING ARTIFACT
HIS
0
1PBT
A
Q9X0N8
UNP
22
1
MET
MODIFIED RESIDUE
MSE
1
1PBT
A
Q9X0N8
UNP
1
23
1
MET
MODIFIED RESIDUE
MSE
25
1PBT
A
Q9X0N8
UNP
25
47
1
MET
MODIFIED RESIDUE
MSE
133
1PBT
A
Q9X0N8
UNP
133
155
1
CLONING ARTIFACT
GLY
221
1PBT
A
Q9X0N8
UNP
243
1
CLONING ARTIFACT
SER
222
1PBT
A
Q9X0N8
UNP
244
7
3
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
LYS
3
A
LYS
25
A
LEU
9
A
LEU
31
A
LYS
213
A
LYS
235
A
GLY
219
A
GLY
241
A
TYR
180
A
TYR
202
A
ARG
186
A
ARG
208
A
LEU
128
A
LEU
150
A
LEU
131
A
LEU
153
A
ILE
35
A
ILE
57
A
LEU
39
A
LEU
61
A
ILE
62
A
ILE
84
A
LEU
66
A
LEU
88
A
VAL
99
A
VAL
121
A
HIS
100
A
HIS
122
A
ASP
68
A
ASP
90
A
ARG
70
A
ARG
92
A
ARG
167
A
ARG
189
A
LEU
170
A
LEU
192
A
VAL
154
A
VAL
176
A
PHE
156
A
PHE
178
BINDING SITE FOR RESIDUE SO4 A 302
Software
9
BINDING SITE FOR RESIDUE SO4 A 303
Software
6
BINDING SITE FOR RESIDUE TRS A 301
Software
9
BINDING SITE FOR RESIDUE EDO A 304
Software
5
BINDING SITE FOR RESIDUE FMT A 305
Software
7
A
ARG
70
A
ARG
92
9
1_555
A
HIS
138
A
HIS
160
9
1_555
A
ALA
140
A
ALA
162
9
1_555
A
ASP
162
A
ASP
184
9
1_555
A
ARG
167
A
ARG
189
9
1_555
A
HOH
328
G
HOH
9
1_555
A
HOH
363
G
HOH
9
1_555
A
HOH
382
G
HOH
9
1_555
A
HOH
581
G
HOH
9
1_555
A
ARG
43
A
ARG
65
6
1_555
A
THR
44
A
THR
66
6
1_555
A
LYS
190
A
LYS
212
6
1_555
A
HOH
354
G
HOH
6
1_555
A
HOH
581
G
HOH
6
1_555
A
HOH
602
G
HOH
6
1_555
A
VAL
99
A
VAL
121
9
1_555
A
HIS
100
A
HIS
122
9
1_555
A
TYR
101
A
TYR
123
9
1_555
A
ASP
103
A
ASP
125
9
1_555
A
LYS
114
A
LYS
136
9
1_555
A
GLU
118
A
GLU
140
9
1_555
A
HOH
321
G
HOH
9
1_555
A
HOH
330
G
HOH
9
1_555
A
HOH
561
G
HOH
9
1_555
A
LYS
3
A
LYS
25
5
1_555
A
LYS
20
A
LYS
42
5
3_655
A
LYS
213
A
LYS
235
5
1_555
A
HOH
491
G
HOH
5
3_655
A
HOH
576
G
HOH
5
1_555
A
ILE
119
A
ILE
141
7
1_555
A
THR
123
A
THR
145
7
1_555
A
ASP
124
A
ASP
146
7
1_555
A
GLN
125
A
GLN
147
7
1_555
A
PHE
126
A
PHE
148
7
1_555
A
THR
177
A
THR
199
7
1_555
A
HOH
531
G
HOH
7
1_555
20
C 2 2 21