1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Sidote, D.J. Hoffman, D.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 42 13541 13550 10.1021/bi030170z 14622001 NMR Structure of an Archaeal Homologue of Ribonuclease P Protein Rpp29 2003 10.2210/pdb1pc0/pdb pdb_00001pc0 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 6900.119 Hypothetical protein AF1917 residue 17-77 1 man polymer no no GLMVEVVESPNHSEVGIKGEVVDETQNTLKIMTEKGLKVVAKRGRTFRVWYKGKIMRIKGD GLMVEVVESPNHSEVGIKGEVVDETQNTLKIMTEKGLKVVAKRGRTFRVWYKGKIMRIKGD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Archaeoglobus Escherichia sample AF1917 2234 Archaeoglobus fulgidus 562 Escherichia coli plasmid pMAL-c2t database_2 pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 2003-12-09 1 1 2008-04-29 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2003-05-15 REL REL This structure was determined using standard 2D homonuclear and 3D heteronuclear techniques. structures with the lowest energy 200 10 3D_15N-separated_NOESY 3D_13C-separated_NOESY 3D_15N-separated_NOESY 2D NOESY 2D NOESY 2D NOESY 100mM 5.8 ambient 303 K 100mM 3.0 ambient 303 K the structures are based on a total of 651 restraints, 554 are NOE-derived distance constraints, 70 dihedral angle restraints,27 distance restraints from hydrogen bonds. distance geometry simulated annealing 1 lowest energy 1.8 mM Rpp29 U-15N;10mM postassium phosphate pH 5.8 100mM sodium Chloride 10mM sodium azide 90% H2O/10% D2O 1.8 mM Rpp29 U-15N;10mM postassium phosphate pH 3.0 100mM sodium Chloride 10mM sodium azide 90% H2O/10% D2O 1.8 mM Rpp29 U-15N; U-13C; 10mM postassium phosphate pH 5.8 100mM sodium Chloride 10mM sodium azide 90% H2O/10% D2O 1.8 mM Rpp29; 10mM postassium phosphate pH 5.8 100mM sodium Chloride 10mM sodium azide 90% H2O/10% D2O 1.8 mM Rpp29; 10mM postassium phosphate pH 3.0 100mM sodium Chloride 10mM sodium azide 90% H2O/10% D2O 1.8 mM Rpp29; 10mM postassium phosphate pH 5.8 100mM sodium Chloride 10mM sodium azide 100% D2O Brunger, A. T. refinement CNS 1.1 500 Varian INOVA GLY 17 n 1 GLY 17 A LEU 18 n 2 LEU 18 A MET 19 n 3 MET 19 A VAL 20 n 4 VAL 20 A GLU 21 n 5 GLU 21 A VAL 22 n 6 VAL 22 A VAL 23 n 7 VAL 23 A GLU 24 n 8 GLU 24 A SER 25 n 9 SER 25 A PRO 26 n 10 PRO 26 A ASN 27 n 11 ASN 27 A HIS 28 n 12 HIS 28 A SER 29 n 13 SER 29 A GLU 30 n 14 GLU 30 A VAL 31 n 15 VAL 31 A GLY 32 n 16 GLY 32 A ILE 33 n 17 ILE 33 A LYS 34 n 18 LYS 34 A GLY 35 n 19 GLY 35 A GLU 36 n 20 GLU 36 A VAL 37 n 21 VAL 37 A VAL 38 n 22 VAL 38 A ASP 39 n 23 ASP 39 A GLU 40 n 24 GLU 40 A THR 41 n 25 THR 41 A GLN 42 n 26 GLN 42 A ASN 43 n 27 ASN 43 A THR 44 n 28 THR 44 A LEU 45 n 29 LEU 45 A LYS 46 n 30 LYS 46 A ILE 47 n 31 ILE 47 A MET 48 n 32 MET 48 A THR 49 n 33 THR 49 A GLU 50 n 34 GLU 50 A LYS 51 n 35 LYS 51 A GLY 52 n 36 GLY 52 A LEU 53 n 37 LEU 53 A LYS 54 n 38 LYS 54 A VAL 55 n 39 VAL 55 A VAL 56 n 40 VAL 56 A ALA 57 n 41 ALA 57 A LYS 58 n 42 LYS 58 A ARG 59 n 43 ARG 59 A GLY 60 n 44 GLY 60 A ARG 61 n 45 ARG 61 A THR 62 n 46 THR 62 A PHE 63 n 47 PHE 63 A ARG 64 n 48 ARG 64 A VAL 65 n 49 VAL 65 A TRP 66 n 50 TRP 66 A TYR 67 n 51 TYR 67 A LYS 68 n 52 LYS 68 A GLY 69 n 53 GLY 69 A LYS 70 n 54 LYS 70 A ILE 71 n 55 ILE 71 A MET 72 n 56 MET 72 A ARG 73 n 57 ARG 73 A ILE 74 n 58 ILE 74 A LYS 75 n 59 LYS 75 A GLY 76 n 60 GLY 76 A ASP 77 n 61 ASP 77 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 56 A O VAL 40 A N LEU 45 A N LEU 29 A O LYS 46 A O LYS 30 A N VAL 38 A N VAL 22 A O GLY 35 A O GLY 19 A N VAL 20 A N VAL 4 A N GLU 21 A N GLU 5 A O ARG 64 A O ARG 48 A N PHE 63 A N PHE 47 A O ILE 74 A O ILE 58 1 A SER 25 89.90 133.09 1 A PRO 26 -54.37 82.43 1 A ASN 27 177.77 157.39 1 A SER 29 -177.43 55.03 1 A ASP 39 71.16 73.84 1 A ASN 43 -149.60 -91.80 1 A THR 49 -103.40 -88.75 1 A GLU 50 -141.16 -53.01 1 A LYS 58 -36.59 -33.44 1 A ARG 61 54.41 -175.16 2 A SER 25 69.28 99.59 2 A ASN 27 -36.78 151.56 2 A SER 29 -94.60 53.45 2 A GLU 30 -42.73 171.19 2 A THR 41 -149.86 40.95 2 A ASN 43 -171.56 -66.26 2 A THR 49 -107.09 -88.22 2 A GLU 50 -138.63 -55.61 2 A LYS 58 64.23 65.44 2 A ARG 59 65.01 177.43 2 A ARG 61 -58.68 -163.34 2 A LYS 68 -69.44 66.42 3 A SER 25 66.85 103.63 3 A ASN 27 -37.45 156.51 3 A GLU 30 62.04 150.03 3 A GLU 40 -43.17 -77.01 3 A GLN 42 60.43 63.72 3 A ASN 43 179.46 -61.77 3 A THR 49 -131.23 -92.72 3 A GLU 50 -90.39 -91.28 3 A LYS 68 -68.33 66.58 4 A SER 25 75.84 107.41 4 A ASN 27 -40.00 159.89 4 A GLU 30 45.60 -171.77 4 A THR 41 -162.16 50.03 4 A ASN 43 -175.76 -74.48 4 A THR 49 -109.27 -89.22 4 A GLU 50 -130.43 -59.86 4 A LYS 51 -59.27 -8.01 4 A LYS 58 -39.36 -31.45 4 A ARG 61 56.17 -172.02 5 A SER 25 61.87 120.34 5 A ASN 27 -46.28 168.96 5 A GLU 30 61.11 171.80 5 A THR 41 -163.70 45.35 5 A ASN 43 -172.10 -65.31 5 A THR 49 -134.77 -114.62 5 A GLU 50 -64.19 -89.90 5 A LYS 58 25.24 39.69 5 A ARG 59 178.46 -168.26 5 A ARG 61 58.99 -175.36 6 A SER 25 88.55 -16.78 6 A HIS 28 -157.70 -67.11 6 A SER 29 -96.63 -136.74 6 A GLU 30 -162.58 104.33 6 A THR 41 -150.07 44.26 6 A GLN 42 60.35 64.05 6 A ASN 43 -179.05 -82.59 6 A THR 49 -97.97 -68.10 6 A GLU 50 -174.83 -42.51 6 A LYS 58 -59.12 68.84 6 A ARG 61 150.86 163.08 7 A SER 25 61.70 114.48 7 A ASN 27 -43.23 161.67 7 A GLU 30 62.00 152.38 7 A GLU 40 -58.70 91.70 7 A ASN 43 -165.50 -76.05 7 A THR 49 -132.21 -92.94 7 A GLU 50 -89.40 -93.89 7 A LYS 51 -38.53 -30.52 7 A LYS 58 58.46 111.47 7 A ARG 59 53.48 174.94 7 A ARG 61 170.12 126.27 8 A SER 25 34.50 41.13 8 A SER 29 -125.18 -102.25 8 A GLU 30 166.86 88.64 8 A GLU 40 -56.15 95.89 8 A ASN 43 -166.29 -80.12 8 A THR 49 -135.18 -104.02 8 A GLU 50 -79.71 -85.60 8 A LYS 58 62.20 75.70 8 A ARG 59 61.42 -179.02 8 A ARG 61 68.33 -172.98 9 A SER 25 64.36 104.53 9 A ASN 27 -38.76 157.99 9 A GLU 30 62.58 149.22 9 A ASP 39 72.16 74.73 9 A GLN 42 -99.80 -78.25 9 A ASN 43 -137.08 -106.03 9 A THR 49 -112.25 -90.87 9 A GLU 50 -129.57 -58.34 9 A LYS 58 -68.79 67.70 9 A ARG 59 172.50 72.68 9 A ARG 61 58.37 -177.39 9 A LYS 70 179.80 -175.35 10 A SER 25 54.57 102.58 10 A ASN 27 -35.16 155.14 10 A SER 29 -113.43 66.32 10 A GLU 30 -37.56 147.25 10 A GLU 40 -57.77 99.43 10 A ASN 43 -166.64 -79.33 10 A THR 49 -106.05 -93.64 10 A GLU 50 -132.88 -58.35 10 A LYS 58 73.57 -68.65 10 A ARG 61 63.89 -175.80 NMR Structure of the Archaeal Homologue of RNase P Protein Rpp29 1 N N RNA BINDING PROTEIN sandwich, beta-sheet, RNA BINDING PROTEIN RNP1_ARCFU UNP 1 17 O28362 GLMVEVVESPNHSEVGIKGEVVDETQNTLKIMTEKGLKVVAKRGRTFRVWYKGKIMRIKGD 17 77 1PC0 17 77 O28362 A 1 1 61 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 53 A LEU 37 A VAL 56 A VAL 40 A LEU 45 A LEU 29 A MET 48 A MET 32 A VAL 31 A VAL 15 A VAL 38 A VAL 22 A MET 19 A MET 3 A GLU 24 A GLU 8 A THR 62 A THR 46 A TRP 66 A TRP 50 A ILE 71 A ILE 55 A LYS 75 A LYS 59