0.025253
0.000000
0.000000
0.000000
0.014577
0.000000
0.000000
0.000000
0.009950
0.00000
0.00000
0.00000
Xu, W.
Rould, M.A.
Jun, S.
Desplan, C.
Pabo, C.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
39.600
68.600
100.500
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
S
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
S
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
O
N
439
N
O
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
R
C
N
452
N
O
N
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
N
N
465
S
C
N
466
N
C
N
467
N
O
N
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
N
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
N
478
N
O
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
N
N
492
S
C
N
493
N
C
N
494
N
O
N
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
Y
501
N
C
N
502
N
O
N
503
N
O
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
N
N
516
S
C
N
517
N
C
N
518
N
O
N
519
N
C
N
520
N
C
N
521
N
C
N
522
N
O
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
Y
471
N
sing
Y
472
N
sing
N
473
N
sing
Y
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
Y
494
N
doub
Y
495
N
sing
Y
496
N
sing
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
doub
N
501
N
sing
Y
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
doub
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
80
639
650
10.1016/0092-8674(95)90518-9
7867071
Crystal structure of a paired domain-DNA complex at 2.5 A resolution reveals structural basis for Pax developmental mutations.
1995
10.2210/pdb1pdn/pdb
pdb_00001pdn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
ROOM TEMPERATURE
1
IMAGE PLATE
1993-02-01
RIGAKU RAXIS
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
4593.999
DNA (5'-D(*AP*AP*CP*GP*TP*CP*AP*CP*GP*GP*TP*TP*GP*AP*C)-3')
1
syn
polymer
4584.984
DNA (5'-D(*TP*TP*GP*TP*CP*AP*AP*CP*CP*GP*TP*GP*AP*CP*G)-3')
1
syn
polymer
14204.399
PROTEIN (PRD PAIRED)
1
man
polymer
18.015
water
13
nat
water
no
no
(DA)(DA)(DC)(DG)(DT)(DC)(DA)(DC)(DG)(DG)(DT)(DT)(DG)(DA)(DC)
AACGTCACGGTTGAC
A
polydeoxyribonucleotide
no
no
(DT)(DT)(DG)(DT)(DC)(DA)(DA)(DC)(DC)(DG)(DT)(DG)(DA)(DC)(DG)
TTGTCAACCGTGACG
B
polydeoxyribonucleotide
no
no
GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEI
ENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRD
GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEI
ENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRD
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
fruit fly
Drosophila
BL21(DE3)
sample
PRD
7227
Drosophila melanogaster
PRD
BL21(DE3)
PET14BPRDPDB
3.82
68.0000
VAPOR DIFFUSION, HANGING DROP
7.00
pH 7.00, VAPOR DIFFUSION, HANGING DROP
WATER
1
BIS-TRIS-PROPANE
1
PEG 1000
1
NH4 ACETATE
1
MGCL2
1
EDTA
1
DTT
1
WATER
2
PEG 1000
2
DTT
2
5.140
1
19
A
3
B
30
4.487
A_DC3:DG30_B
1
-9.565
-0.158
-0.270
0.038
2.525
1
19
A
4
B
29
-3.473
A_DG4:DC29_B
2
-11.867
-0.310
0.500
-0.162
0.623
1
20
A
5
B
28
-3.687
A_DT5:DA28_B
3
-13.913
0.019
-0.138
-0.015
5.664
1
19
A
6
B
27
0.343
A_DC6:DG27_B
4
-5.196
0.105
-0.418
-0.201
-2.546
1
20
A
7
B
26
-4.797
A_DA7:DT26_B
5
-20.170
-0.012
-0.062
-0.151
-5.840
1
19
A
8
B
25
-4.298
A_DC8:DG25_B
6
-3.879
-0.019
0.207
-0.290
13.257
1
19
A
9
B
24
-3.562
A_DG9:DC24_B
7
-17.806
0.083
0.258
-0.110
-11.764
1
19
A
10
B
23
-0.010
A_DG10:DC23_B
8
-11.130
-0.201
-0.015
-0.406
-2.692
1
20
A
11
B
22
0.721
A_DT11:DA22_B
9
-22.454
0.213
-0.092
0.271
-4.840
1
20
A
12
B
21
-0.520
A_DT12:DA21_B
10
-16.563
-0.653
-0.118
0.112
7.746
1
19
A
13
B
20
-3.091
A_DG13:DC20_B
11
-5.627
-0.076
-0.063
-0.337
15.221
1
20
A
14
B
19
-11.123
A_DA14:DT19_B
12
-16.210
0.323
0.096
0.089
17.083
1
19
A
15
B
18
-9.318
A_DC15:DG18_B
13
-11.392
-0.444
-0.036
-0.007
3.659
39.917
A
A
3
4
7.511
B
B
30
29
3.490
5.080
-1.104
0.383
AA_DC3DG4:DC29DG30_BB
1
-8.248
12.194
38.770
-0.088
0.562
3.380
34.910
A
A
4
5
6.233
B
B
29
28
3.400
3.721
0.540
-0.420
AA_DG4DT5:DA28DC29_BB
2
4.882
-8.179
34.382
-1.288
-0.128
3.115
31.772
A
A
5
6
14.552
B
B
28
27
3.191
7.878
0.047
0.106
AA_DT5DC6:DG27DA28_BB
3
2.603
-4.807
30.696
-1.224
0.382
3.834
40.152
A
A
6
7
11.610
B
B
27
26
3.601
7.908
-1.242
0.999
AA_DC6DA7:DT26DG27_BB
4
-4.313
6.332
39.169
0.418
1.243
3.363
33.845
A
A
7
8
-6.418
B
B
26
25
3.420
-3.723
0.494
-0.255
AA_DA7DC8:DG25DT26_BB
5
-3.433
5.917
33.475
0.187
-1.426
3.148
34.139
A
A
8
9
18.020
B
B
25
24
3.037
10.419
0.192
0.851
AA_DC8DG9:DC24DG25_BB
6
-0.814
1.407
32.546
-0.151
-0.453
3.654
32.634
A
A
9
10
10.999
B
B
24
23
3.986
6.145
0.625
-1.469
AA_DG9DG10:DC23DC24_BB
7
0.248
-0.444
32.065
-3.871
-1.062
2.924
35.028
A
A
10
11
9.400
B
B
23
22
3.100
5.632
-0.425
-0.724
AA_DG10DT11:DA22DC23_BB
8
1.837
-3.066
34.539
-1.988
0.962
3.357
31.991
A
A
11
12
-1.329
B
B
22
21
3.353
-0.732
0.121
-0.149
AA_DT11DT12:DA21DA22_BB
9
1.653
-3.000
31.941
-0.135
0.087
3.256
36.919
A
A
12
13
1.343
B
B
21
20
3.211
0.850
0.215
1.791
AA_DT12DG13:DC20DA21_BB
10
1.462
-2.310
36.881
2.715
-0.143
3.425
37.801
A
A
13
14
3.467
B
B
20
19
3.277
2.244
-1.389
1.392
AA_DG13DA14:DT19DC20_BB
11
-2.247
3.472
37.672
1.853
1.847
3.441
30.483
A
A
14
15
-3.761
B
B
19
18
3.302
-1.968
1.084
-0.319
AA_DA14DC15:DG18DT19_BB
12
4.721
-9.019
30.061
-0.199
-1.084
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1995-07-31
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
BNL
1995-05-16
REL
HOH
water
HOH
1004
4
HOH
HOH
1004
B
HOH
1005
4
HOH
HOH
1005
B
HOH
1006
4
HOH
HOH
1006
B
HOH
1007
4
HOH
HOH
1007
B
HOH
1010
4
HOH
HOH
1010
B
HOH
1012
4
HOH
HOH
1012
B
HOH
1013
4
HOH
HOH
1013
B
HOH
1001
4
HOH
HOH
1001
C
HOH
1002
4
HOH
HOH
1002
C
HOH
1003
4
HOH
HOH
1003
C
HOH
1008
4
HOH
HOH
1008
C
HOH
1009
4
HOH
HOH
1009
C
HOH
1011
4
HOH
HOH
1011
C
A
1
n
1
DA
1
A
A
2
n
2
DA
2
A
C
3
n
3
DC
3
A
G
4
n
4
DG
4
A
T
5
n
5
DT
5
A
C
6
n
6
DC
6
A
A
7
n
7
DA
7
A
C
8
n
8
DC
8
A
G
9
n
9
DG
9
A
G
10
n
10
DG
10
A
T
11
n
11
DT
11
A
T
12
n
12
DT
12
A
G
13
n
13
DG
13
A
A
14
n
14
DA
14
A
C
15
n
15
DC
15
A
T
16
n
1
DT
16
B
T
17
n
2
DT
17
B
G
18
n
3
DG
18
B
T
19
n
4
DT
19
B
C
20
n
5
DC
20
B
A
21
n
6
DA
21
B
A
22
n
7
DA
22
B
C
23
n
8
DC
23
B
C
24
n
9
DC
24
B
G
25
n
10
DG
25
B
T
26
n
11
DT
26
B
G
27
n
12
DG
27
B
A
28
n
13
DA
28
B
C
29
n
14
DC
29
B
G
30
n
15
DG
30
B
n
1
1
C
GLN
2
n
2
GLN
2
C
GLY
3
n
3
GLY
3
C
ARG
4
n
4
ARG
4
C
VAL
5
n
5
VAL
5
C
ASN
6
n
6
ASN
6
C
GLN
7
n
7
GLN
7
C
LEU
8
n
8
LEU
8
C
GLY
9
n
9
GLY
9
C
GLY
10
n
10
GLY
10
C
VAL
11
n
11
VAL
11
C
PHE
12
n
12
PHE
12
C
ILE
13
n
13
ILE
13
C
ASN
14
n
14
ASN
14
C
GLY
15
n
15
GLY
15
C
ARG
16
n
16
ARG
16
C
PRO
17
n
17
PRO
17
C
LEU
18
n
18
LEU
18
C
PRO
19
n
19
PRO
19
C
ASN
20
n
20
ASN
20
C
ASN
21
n
21
ASN
21
C
ILE
22
n
22
ILE
22
C
ARG
23
n
23
ARG
23
C
LEU
24
n
24
LEU
24
C
LYS
25
n
25
LYS
25
C
ILE
26
n
26
ILE
26
C
VAL
27
n
27
VAL
27
C
GLU
28
n
28
GLU
28
C
MET
29
n
29
MET
29
C
ALA
30
n
30
ALA
30
C
ALA
31
n
31
ALA
31
C
ASP
32
n
32
ASP
32
C
GLY
33
n
33
GLY
33
C
ILE
34
n
34
ILE
34
C
ARG
35
n
35
ARG
35
C
PRO
36
n
36
PRO
36
C
CYS
37
n
37
CYS
37
C
VAL
38
n
38
VAL
38
C
ILE
39
n
39
ILE
39
C
SER
40
n
40
SER
40
C
ARG
41
n
41
ARG
41
C
GLN
42
n
42
GLN
42
C
LEU
43
n
43
LEU
43
C
ARG
44
n
44
ARG
44
C
VAL
45
n
45
VAL
45
C
SER
46
n
46
SER
46
C
HIS
47
n
47
HIS
47
C
GLY
48
n
48
GLY
48
C
CYS
49
n
49
CYS
49
C
VAL
50
n
50
VAL
50
C
SER
51
n
51
SER
51
C
LYS
52
n
52
LYS
52
C
ILE
53
n
53
ILE
53
C
LEU
54
n
54
LEU
54
C
ASN
55
n
55
ASN
55
C
ARG
56
n
56
ARG
56
C
TYR
57
n
57
TYR
57
C
GLN
58
n
58
GLN
58
C
GLU
59
n
59
GLU
59
C
THR
60
n
60
THR
60
C
GLY
61
n
61
GLY
61
C
SER
62
n
62
SER
62
C
ILE
63
n
63
ILE
63
C
ARG
64
n
64
ARG
64
C
PRO
65
n
65
PRO
65
C
GLY
66
n
66
GLY
66
C
VAL
67
n
67
VAL
67
C
ILE
68
n
68
ILE
68
C
GLY
69
n
69
GLY
69
C
GLY
70
n
70
GLY
70
C
SER
71
n
71
SER
71
C
LYS
72
n
72
LYS
72
C
PRO
73
n
73
PRO
73
C
ARG
74
n
74
ARG
74
C
ILE
75
n
75
ILE
75
C
ALA
76
n
76
ALA
76
C
THR
77
n
77
THR
77
C
PRO
78
n
78
PRO
78
C
GLU
79
n
79
GLU
79
C
ILE
80
n
80
ILE
80
C
GLU
81
n
81
GLU
81
C
ASN
82
n
82
ASN
82
C
ARG
83
n
83
ARG
83
C
ILE
84
n
84
ILE
84
C
GLU
85
n
85
GLU
85
C
GLU
86
n
86
GLU
86
C
TYR
87
n
87
TYR
87
C
LYS
88
n
88
LYS
88
C
ARG
89
n
89
ARG
89
C
SER
90
n
90
SER
90
C
SER
91
n
91
SER
91
C
PRO
92
n
92
PRO
92
C
GLY
93
n
93
GLY
93
C
MET
94
n
94
MET
94
C
PHE
95
n
95
PHE
95
C
SER
96
n
96
SER
96
C
TRP
97
n
97
TRP
97
C
GLU
98
n
98
GLU
98
C
ILE
99
n
99
ILE
99
C
ARG
100
n
100
ARG
100
C
GLU
101
n
101
GLU
101
C
LYS
102
n
102
LYS
102
C
LEU
103
n
103
LEU
103
C
ILE
104
n
104
ILE
104
C
ARG
105
n
105
ARG
105
C
GLU
106
n
106
GLU
106
C
GLY
107
n
107
GLY
107
C
VAL
108
n
108
VAL
108
C
CYS
109
n
109
CYS
109
C
ASP
110
n
110
ASP
110
C
ARG
111
n
111
ARG
111
C
SER
112
n
112
SER
112
C
THR
113
n
113
THR
113
C
ALA
114
n
114
ALA
114
C
PRO
115
n
115
PRO
115
C
SER
116
n
116
SER
116
C
VAL
117
n
117
VAL
117
C
SER
118
n
118
SER
118
C
ALA
119
n
119
ALA
119
C
ILE
120
n
120
ILE
120
C
SER
121
n
121
SER
121
C
ARG
122
n
122
ARG
122
C
LEU
123
n
123
LEU
123
C
VAL
124
n
124
VAL
124
C
n
125
125
C
n
126
126
C
n
127
127
C
n
128
128
C
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
C
O
ARG
4
C
O
ARG
4
C
N
PHE
12
C
N
PHE
12
1
C
OG
SER
71
C
OG
SER
71
1
Y
1
C
CG
LYS
72
C
CG
LYS
72
1
Y
1
C
CD
LYS
72
C
CD
LYS
72
1
Y
1
C
CE
LYS
72
C
CE
LYS
72
1
Y
1
C
NZ
LYS
72
C
NZ
LYS
72
1
Y
1
C
CG
PRO
73
C
CG
PRO
73
1
Y
1
C
CD
PRO
73
C
CD
PRO
73
1
Y
1
C
CG1
ILE
75
C
CG1
ILE
75
1
Y
1
C
CG2
ILE
75
C
CG2
ILE
75
1
Y
1
C
CD1
ILE
75
C
CD1
ILE
75
1
Y
1
C
OG1
THR
77
C
OG1
THR
77
1
Y
1
C
CG2
THR
77
C
CG2
THR
77
1
Y
1
C
CG
PRO
78
C
CG
PRO
78
1
Y
1
C
CD
PRO
78
C
CD
PRO
78
1
Y
1
C
CG
GLU
81
C
CG
GLU
81
1
Y
1
C
CD
GLU
81
C
CD
GLU
81
1
Y
1
C
OE1
GLU
81
C
OE1
GLU
81
1
Y
1
C
OE2
GLU
81
C
OE2
GLU
81
1
Y
1
C
CG
TYR
87
C
CG
TYR
87
1
Y
1
C
CD1
TYR
87
C
CD1
TYR
87
1
Y
1
C
CD2
TYR
87
C
CD2
TYR
87
1
Y
1
C
CE1
TYR
87
C
CE1
TYR
87
1
Y
1
C
CE2
TYR
87
C
CE2
TYR
87
1
Y
1
C
CZ
TYR
87
C
CZ
TYR
87
1
Y
1
C
OH
TYR
87
C
OH
TYR
87
1
Y
1
C
CG
ARG
89
C
CG
ARG
89
1
Y
1
C
CD
ARG
89
C
CD
ARG
89
1
Y
1
C
NE
ARG
89
C
NE
ARG
89
1
Y
1
C
CZ
ARG
89
C
CZ
ARG
89
1
Y
1
C
NH1
ARG
89
C
NH1
ARG
89
1
Y
1
C
NH2
ARG
89
C
NH2
ARG
89
1
Y
1
C
OG
SER
90
C
OG
SER
90
1
Y
1
C
OG
SER
91
C
OG
SER
91
1
Y
1
C
CG
PRO
92
C
CG
PRO
92
1
Y
1
C
CD
PRO
92
C
CD
PRO
92
1
Y
1
C
CG
ARG
122
C
CG
ARG
122
1
Y
1
C
CD
ARG
122
C
CD
ARG
122
1
Y
1
C
NE
ARG
122
C
NE
ARG
122
1
Y
1
C
CZ
ARG
122
C
CZ
ARG
122
1
Y
1
C
NH1
ARG
122
C
NH1
ARG
122
1
Y
1
C
NH2
ARG
122
C
NH2
ARG
122
1
Y
1
C
CG1
VAL
124
C
CG1
VAL
124
1
Y
1
C
CG2
VAL
124
C
CG2
VAL
124
1
Y
1
C
GLY
1
C
GLY
1
1
Y
1
C
ARG
125
C
ARG
125
1
Y
1
C
GLY
126
C
GLY
126
1
Y
1
C
ARG
127
C
ARG
127
1
Y
1
C
ASP
128
C
ASP
128
1
Y
1
-5.22
0.50
110.60
105.38
A
A
A
C2
N3
C4
DA
DA
DA
1
1
1
N
1
-3.15
0.50
117.70
114.55
A
A
A
C5
C6
N1
DA
DA
DA
1
1
1
N
1
-4.92
0.80
127.40
122.48
A
A
A
N3
C4
N9
DA
DA
DA
1
1
1
N
1
-12.34
1.00
110.10
97.76
A
A
A
C1'
O4'
C4'
DA
DA
DA
2
2
2
N
1
-5.53
0.80
105.90
100.37
A
A
A
O4'
C1'
C2'
DA
DA
DA
2
2
2
N
1
2.78
0.30
108.30
111.08
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
1
4.21
0.60
118.90
123.11
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
1
-4.69
0.70
121.90
117.21
A
A
A
N3
C2
O2
DC
DC
DC
3
3
3
N
1
2.57
0.30
108.30
110.87
A
A
A
O4'
C1'
N9
DG
DG
DG
4
4
4
N
1
-4.06
0.60
122.90
118.84
A
A
A
C6
C5
C7
DT
DT
DT
5
5
5
N
1
8.14
1.20
119.70
127.84
A
A
A
C3'
O3'
P
DC
DC
DA
6
6
7
Y
1
-5.02
0.70
108.00
102.98
A
A
A
O4'
C1'
N9
DA
DA
DA
7
7
7
N
1
-4.81
0.80
105.90
101.09
A
A
A
O4'
C1'
C2'
DC
DC
DC
8
8
8
N
1
-6.61
1.00
110.10
103.49
A
A
A
C1'
O4'
C4'
DG
DG
DG
10
10
10
N
1
-4.80
0.70
102.20
97.40
A
A
A
C4'
C3'
C2'
DG
DG
DG
10
10
10
N
1
-4.64
0.60
122.90
118.26
A
A
A
C6
C5
C7
DT
DT
DT
11
11
11
N
1
2.56
0.30
108.30
110.86
A
A
A
O4'
C1'
N1
DC
DC
DC
15
15
15
N
1
3.69
0.60
106.00
109.69
B
B
B
O4'
C4'
C3'
DT
DT
DT
16
16
16
N
1
1.83
0.30
108.30
110.13
B
B
B
O4'
C1'
N1
DT
DT
DT
16
16
16
N
1
-5.16
0.80
105.90
100.74
B
B
B
O4'
C1'
C2'
DT
DT
DT
17
17
17
N
1
-5.34
0.60
122.30
116.96
B
B
B
N3
C2
O2
DT
DT
DT
17
17
17
N
1
4.10
0.60
118.00
122.10
B
B
B
C4
C5
C6
DT
DT
DT
19
19
19
N
1
1.96
0.30
108.30
110.26
B
B
B
O4'
C1'
N9
DA
DA
DA
21
21
21
N
1
-6.37
0.70
102.20
95.83
B
B
B
C4'
C3'
C2'
DA
DA
DA
22
22
22
N
1
2.56
0.30
108.30
110.86
B
B
B
O4'
C1'
N9
DA
DA
DA
22
22
22
N
1
-5.43
0.80
105.90
100.47
B
B
B
O4'
C1'
C2'
DC
DC
DC
23
23
23
N
1
4.46
0.30
108.30
112.76
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
1
-3.19
0.40
104.50
101.31
B
B
B
O4'
C4'
C3'
DC
DC
DC
24
24
24
N
1
2.30
0.30
108.30
110.60
B
B
B
O4'
C1'
N9
DG
DG
DG
25
25
25
N
1
-2.97
0.40
106.40
103.43
B
B
B
C8
N9
C4
DG
DG
DG
25
25
25
N
1
2.46
0.40
105.40
107.86
B
B
B
N9
C4
C5
DG
DG
DG
25
25
25
N
1
7.25
1.20
119.70
126.95
B
B
B
C3'
O3'
P
DG
DG
DT
25
25
26
Y
1
3.89
0.60
118.00
121.89
B
B
B
C4
C5
C6
DT
DT
DT
26
26
26
N
1
-4.79
0.60
122.30
117.51
B
B
B
N3
C2
O2
DT
DT
DT
26
26
26
N
1
-5.58
0.80
105.90
100.32
B
B
B
O4'
C1'
C2'
DG
DG
DG
27
27
27
N
1
3.64
0.30
108.30
111.94
B
B
B
O4'
C1'
N9
DA
DA
DA
28
28
28
N
1
2.46
0.30
108.30
110.76
B
B
B
O4'
C1'
N1
DC
DC
DC
29
29
29
N
1
8.94
1.20
103.30
112.24
C
C
C
N
CA
CB
PRO
PRO
PRO
78
78
78
N
1
A
A
C5'
C4'
DA
DA
1
1
0.045
0.007
1.512
1.557
N
1
A
A
N9
C4
DA
DA
1
1
-0.044
0.006
1.374
1.330
N
1
B
B
C5
C7
DT
DT
17
17
0.047
0.006
1.496
1.543
N
1
B
B
C3'
C2'
DC
DC
23
23
-0.049
0.008
1.516
1.467
N
1
B
B
O3'
C3'
DC
DC
23
23
-0.039
0.006
1.419
1.380
N
1
B
B
O3'
C3'
DC
DC
24
24
-0.045
0.006
1.419
1.374
N
1
B
B
C6
N1
DT
DT
26
26
-0.044
0.007
1.378
1.334
N
1
C
ARG
44
72.34
38.68
1
C
ALA
76
-101.81
66.18
1
C
PRO
78
110.68
-173.95
1
C
TYR
87
-81.78
35.48
1
C
SER
91
18.80
-88.62
0.2840000
0.2340000
0.2340000
2.500
20.000
9285
10.00
92.500
1
0.000
2.500
20.000
13
1534
0
609
912
0.017
3.50
28.4
0.80
2.500
20.000
1PDN
40156
9285
0.0750000
1
4.680
refinement
X-PLOR
data reduction
DENZO
CRYSTAL STRUCTURE OF A PAIRED DOMAIN-DNA COMPLEX AT 2.5 ANGSTROMS RESOLUTION REVEALS STRUCTURAL BASIS FOR PAX DEVELOPMENTAL MUTATIONS
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
C
ASN
20
C
ASN
20
HELX_P
C
ASP
32
C
ASP
32
1
1
13
C
PRO
36
C
PRO
36
HELX_P
C
LEU
43
C
LEU
43
1
2
8
C
HIS
47
C
HIS
47
HELX_P
C
THR
60
C
THR
60
1
3
14
C
ILE
80
C
ILE
80
HELX_P
C
GLU
86
C
GLU
86
1
4
7
C
SER
96
C
SER
96
HELX_P
C
ARG
105
C
ARG
105
1
5
10
C
VAL
117
C
VAL
117
HELX_P
C
LEU
123
C
LEU
123
1
6
7
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
30
B
N1
DG
15
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
30
B
O6
DG
15
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
30
B
N2
DG
15
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
29
B
N3
DC
14
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
29
B
O2
DC
14
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
29
B
N4
DC
14
1_555
hydrog
WATSON-CRICK
A
DT
5
A
N3
DT
5
1_555
B
DA
28
B
N1
DA
13
1_555
hydrog
WATSON-CRICK
A
DT
5
A
O4
DT
5
1_555
B
DA
28
B
N6
DA
13
1_555
hydrog
WATSON-CRICK
A
DC
6
A
N3
DC
6
1_555
B
DG
27
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
6
A
N4
DC
6
1_555
B
DG
27
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
6
A
O2
DC
6
1_555
B
DG
27
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N1
DA
7
1_555
B
DT
26
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N6
DA
7
1_555
B
DT
26
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
B
DG
25
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
B
DG
25
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
B
DG
25
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
B
DC
24
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
B
DC
24
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
B
DC
24
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
23
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
23
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
23
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
DT
11
A
N3
DT
11
1_555
B
DA
22
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
A
DT
11
A
O4
DT
11
1_555
B
DA
22
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
A
DT
12
A
N3
DT
12
1_555
B
DA
21
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
12
A
O4
DT
12
1_555
B
DA
21
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DG
13
A
N1
DG
13
1_555
B
DC
20
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
13
A
N2
DG
13
1_555
B
DC
20
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
13
A
O6
DG
13
1_555
B
DC
20
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DA
14
A
N1
DA
14
1_555
B
DT
19
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
14
A
N6
DA
14
1_555
B
DT
19
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DC
15
A
N3
DC
15
1_555
B
DG
18
B
N1
DG
3
1_555
hydrog
WATSON-CRICK
A
DC
15
A
N4
DC
15
1_555
B
DG
18
B
O6
DG
3
1_555
hydrog
WATSON-CRICK
A
DC
15
A
O2
DC
15
1_555
B
DG
18
B
N2
DG
3
1_555
GENE REGULATION/DNA
PROTEIN-DNA COMPLEX, DOUBLE HELIX, PAX, PRD, PAIRED DOMAIN, DNA-BINDING PROTEIN, GENE REGULATION-DNA COMPLEX
PRD_DROME
UNP
3
P06601
1PDN
PDB
1
1PDN
1PDN
PDB
2
1PDN
27
154
1PDN
1
128
P06601
C
1
1
128
1
15
1PDN
1
15
1PDN
A
2
1
15
16
30
1PDN
16
30
1PDN
B
3
1
15
2
anti-parallel
C
GLY
3
C
GLY
3
C
VAL
5
C
VAL
5
C
VAL
11
C
VAL
11
C
ILE
13
C
ILE
13
19
P 21 21 21