0.025253 0.000000 0.000000 0.000000 0.014577 0.000000 0.000000 0.000000 0.009950 0.00000 0.00000 0.00000 Xu, W. Rould, M.A. Jun, S. Desplan, C. Pabo, C.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 39.600 68.600 100.500 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 R C N 452 N O N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N N N 465 S C N 466 N C N 467 N O N 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N N Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C N 502 N O N 503 N O N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N N N 516 S C N 517 N C N 518 N O N 519 N C N 520 N C N 521 N C N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 80 639 650 10.1016/0092-8674(95)90518-9 7867071 Crystal structure of a paired domain-DNA complex at 2.5 A resolution reveals structural basis for Pax developmental mutations. 1995 10.2210/pdb1pdn/pdb pdb_00001pdn 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 ROOM TEMPERATURE 1 IMAGE PLATE 1993-02-01 RIGAKU RAXIS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 4593.999 DNA (5'-D(*AP*AP*CP*GP*TP*CP*AP*CP*GP*GP*TP*TP*GP*AP*C)-3') 1 syn polymer 4584.984 DNA (5'-D(*TP*TP*GP*TP*CP*AP*AP*CP*CP*GP*TP*GP*AP*CP*G)-3') 1 syn polymer 14204.399 PROTEIN (PRD PAIRED) 1 man polymer 18.015 water 13 nat water no no (DA)(DA)(DC)(DG)(DT)(DC)(DA)(DC)(DG)(DG)(DT)(DT)(DG)(DA)(DC) AACGTCACGGTTGAC A polydeoxyribonucleotide no no (DT)(DT)(DG)(DT)(DC)(DA)(DA)(DC)(DC)(DG)(DT)(DG)(DA)(DC)(DG) TTGTCAACCGTGACG B polydeoxyribonucleotide no no GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEI ENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRD GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPRIATPEI ENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGRD C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n fruit fly Drosophila BL21(DE3) sample PRD 7227 Drosophila melanogaster PRD BL21(DE3) PET14BPRDPDB 3.82 68.0000 VAPOR DIFFUSION, HANGING DROP 7.00 pH 7.00, VAPOR DIFFUSION, HANGING DROP WATER 1 BIS-TRIS-PROPANE 1 PEG 1000 1 NH4 ACETATE 1 MGCL2 1 EDTA 1 DTT 1 WATER 2 PEG 1000 2 DTT 2 5.140 1 19 A 3 B 30 4.487 A_DC3:DG30_B 1 -9.565 -0.158 -0.270 0.038 2.525 1 19 A 4 B 29 -3.473 A_DG4:DC29_B 2 -11.867 -0.310 0.500 -0.162 0.623 1 20 A 5 B 28 -3.687 A_DT5:DA28_B 3 -13.913 0.019 -0.138 -0.015 5.664 1 19 A 6 B 27 0.343 A_DC6:DG27_B 4 -5.196 0.105 -0.418 -0.201 -2.546 1 20 A 7 B 26 -4.797 A_DA7:DT26_B 5 -20.170 -0.012 -0.062 -0.151 -5.840 1 19 A 8 B 25 -4.298 A_DC8:DG25_B 6 -3.879 -0.019 0.207 -0.290 13.257 1 19 A 9 B 24 -3.562 A_DG9:DC24_B 7 -17.806 0.083 0.258 -0.110 -11.764 1 19 A 10 B 23 -0.010 A_DG10:DC23_B 8 -11.130 -0.201 -0.015 -0.406 -2.692 1 20 A 11 B 22 0.721 A_DT11:DA22_B 9 -22.454 0.213 -0.092 0.271 -4.840 1 20 A 12 B 21 -0.520 A_DT12:DA21_B 10 -16.563 -0.653 -0.118 0.112 7.746 1 19 A 13 B 20 -3.091 A_DG13:DC20_B 11 -5.627 -0.076 -0.063 -0.337 15.221 1 20 A 14 B 19 -11.123 A_DA14:DT19_B 12 -16.210 0.323 0.096 0.089 17.083 1 19 A 15 B 18 -9.318 A_DC15:DG18_B 13 -11.392 -0.444 -0.036 -0.007 3.659 39.917 A A 3 4 7.511 B B 30 29 3.490 5.080 -1.104 0.383 AA_DC3DG4:DC29DG30_BB 1 -8.248 12.194 38.770 -0.088 0.562 3.380 34.910 A A 4 5 6.233 B B 29 28 3.400 3.721 0.540 -0.420 AA_DG4DT5:DA28DC29_BB 2 4.882 -8.179 34.382 -1.288 -0.128 3.115 31.772 A A 5 6 14.552 B B 28 27 3.191 7.878 0.047 0.106 AA_DT5DC6:DG27DA28_BB 3 2.603 -4.807 30.696 -1.224 0.382 3.834 40.152 A A 6 7 11.610 B B 27 26 3.601 7.908 -1.242 0.999 AA_DC6DA7:DT26DG27_BB 4 -4.313 6.332 39.169 0.418 1.243 3.363 33.845 A A 7 8 -6.418 B B 26 25 3.420 -3.723 0.494 -0.255 AA_DA7DC8:DG25DT26_BB 5 -3.433 5.917 33.475 0.187 -1.426 3.148 34.139 A A 8 9 18.020 B B 25 24 3.037 10.419 0.192 0.851 AA_DC8DG9:DC24DG25_BB 6 -0.814 1.407 32.546 -0.151 -0.453 3.654 32.634 A A 9 10 10.999 B B 24 23 3.986 6.145 0.625 -1.469 AA_DG9DG10:DC23DC24_BB 7 0.248 -0.444 32.065 -3.871 -1.062 2.924 35.028 A A 10 11 9.400 B B 23 22 3.100 5.632 -0.425 -0.724 AA_DG10DT11:DA22DC23_BB 8 1.837 -3.066 34.539 -1.988 0.962 3.357 31.991 A A 11 12 -1.329 B B 22 21 3.353 -0.732 0.121 -0.149 AA_DT11DT12:DA21DA22_BB 9 1.653 -3.000 31.941 -0.135 0.087 3.256 36.919 A A 12 13 1.343 B B 21 20 3.211 0.850 0.215 1.791 AA_DT12DG13:DC20DA21_BB 10 1.462 -2.310 36.881 2.715 -0.143 3.425 37.801 A A 13 14 3.467 B B 20 19 3.277 2.244 -1.389 1.392 AA_DG13DA14:DT19DC20_BB 11 -2.247 3.472 37.672 1.853 1.847 3.441 30.483 A A 14 15 -3.761 B B 19 18 3.302 -1.968 1.084 -0.319 AA_DA14DC15:DG18DT19_BB 12 4.721 -9.019 30.061 -0.199 -1.084 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Data collection Database references 1 0 1995-07-31 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession BNL Y BNL 1995-05-16 REL HOH water HOH 1004 4 HOH HOH 1004 B HOH 1005 4 HOH HOH 1005 B HOH 1006 4 HOH HOH 1006 B HOH 1007 4 HOH HOH 1007 B HOH 1010 4 HOH HOH 1010 B HOH 1012 4 HOH HOH 1012 B HOH 1013 4 HOH HOH 1013 B HOH 1001 4 HOH HOH 1001 C HOH 1002 4 HOH HOH 1002 C HOH 1003 4 HOH HOH 1003 C HOH 1008 4 HOH HOH 1008 C HOH 1009 4 HOH HOH 1009 C HOH 1011 4 HOH HOH 1011 C A 1 n 1 DA 1 A A 2 n 2 DA 2 A C 3 n 3 DC 3 A G 4 n 4 DG 4 A T 5 n 5 DT 5 A C 6 n 6 DC 6 A A 7 n 7 DA 7 A C 8 n 8 DC 8 A G 9 n 9 DG 9 A G 10 n 10 DG 10 A T 11 n 11 DT 11 A T 12 n 12 DT 12 A G 13 n 13 DG 13 A A 14 n 14 DA 14 A C 15 n 15 DC 15 A T 16 n 1 DT 16 B T 17 n 2 DT 17 B G 18 n 3 DG 18 B T 19 n 4 DT 19 B C 20 n 5 DC 20 B A 21 n 6 DA 21 B A 22 n 7 DA 22 B C 23 n 8 DC 23 B C 24 n 9 DC 24 B G 25 n 10 DG 25 B T 26 n 11 DT 26 B G 27 n 12 DG 27 B A 28 n 13 DA 28 B C 29 n 14 DC 29 B G 30 n 15 DG 30 B n 1 1 C GLN 2 n 2 GLN 2 C GLY 3 n 3 GLY 3 C ARG 4 n 4 ARG 4 C VAL 5 n 5 VAL 5 C ASN 6 n 6 ASN 6 C GLN 7 n 7 GLN 7 C LEU 8 n 8 LEU 8 C GLY 9 n 9 GLY 9 C GLY 10 n 10 GLY 10 C VAL 11 n 11 VAL 11 C PHE 12 n 12 PHE 12 C ILE 13 n 13 ILE 13 C ASN 14 n 14 ASN 14 C GLY 15 n 15 GLY 15 C ARG 16 n 16 ARG 16 C PRO 17 n 17 PRO 17 C LEU 18 n 18 LEU 18 C PRO 19 n 19 PRO 19 C ASN 20 n 20 ASN 20 C ASN 21 n 21 ASN 21 C ILE 22 n 22 ILE 22 C ARG 23 n 23 ARG 23 C LEU 24 n 24 LEU 24 C LYS 25 n 25 LYS 25 C ILE 26 n 26 ILE 26 C VAL 27 n 27 VAL 27 C GLU 28 n 28 GLU 28 C MET 29 n 29 MET 29 C ALA 30 n 30 ALA 30 C ALA 31 n 31 ALA 31 C ASP 32 n 32 ASP 32 C GLY 33 n 33 GLY 33 C ILE 34 n 34 ILE 34 C ARG 35 n 35 ARG 35 C PRO 36 n 36 PRO 36 C CYS 37 n 37 CYS 37 C VAL 38 n 38 VAL 38 C ILE 39 n 39 ILE 39 C SER 40 n 40 SER 40 C ARG 41 n 41 ARG 41 C GLN 42 n 42 GLN 42 C LEU 43 n 43 LEU 43 C ARG 44 n 44 ARG 44 C VAL 45 n 45 VAL 45 C SER 46 n 46 SER 46 C HIS 47 n 47 HIS 47 C GLY 48 n 48 GLY 48 C CYS 49 n 49 CYS 49 C VAL 50 n 50 VAL 50 C SER 51 n 51 SER 51 C LYS 52 n 52 LYS 52 C ILE 53 n 53 ILE 53 C LEU 54 n 54 LEU 54 C ASN 55 n 55 ASN 55 C ARG 56 n 56 ARG 56 C TYR 57 n 57 TYR 57 C GLN 58 n 58 GLN 58 C GLU 59 n 59 GLU 59 C THR 60 n 60 THR 60 C GLY 61 n 61 GLY 61 C SER 62 n 62 SER 62 C ILE 63 n 63 ILE 63 C ARG 64 n 64 ARG 64 C PRO 65 n 65 PRO 65 C GLY 66 n 66 GLY 66 C VAL 67 n 67 VAL 67 C ILE 68 n 68 ILE 68 C GLY 69 n 69 GLY 69 C GLY 70 n 70 GLY 70 C SER 71 n 71 SER 71 C LYS 72 n 72 LYS 72 C PRO 73 n 73 PRO 73 C ARG 74 n 74 ARG 74 C ILE 75 n 75 ILE 75 C ALA 76 n 76 ALA 76 C THR 77 n 77 THR 77 C PRO 78 n 78 PRO 78 C GLU 79 n 79 GLU 79 C ILE 80 n 80 ILE 80 C GLU 81 n 81 GLU 81 C ASN 82 n 82 ASN 82 C ARG 83 n 83 ARG 83 C ILE 84 n 84 ILE 84 C GLU 85 n 85 GLU 85 C GLU 86 n 86 GLU 86 C TYR 87 n 87 TYR 87 C LYS 88 n 88 LYS 88 C ARG 89 n 89 ARG 89 C SER 90 n 90 SER 90 C SER 91 n 91 SER 91 C PRO 92 n 92 PRO 92 C GLY 93 n 93 GLY 93 C MET 94 n 94 MET 94 C PHE 95 n 95 PHE 95 C SER 96 n 96 SER 96 C TRP 97 n 97 TRP 97 C GLU 98 n 98 GLU 98 C ILE 99 n 99 ILE 99 C ARG 100 n 100 ARG 100 C GLU 101 n 101 GLU 101 C LYS 102 n 102 LYS 102 C LEU 103 n 103 LEU 103 C ILE 104 n 104 ILE 104 C ARG 105 n 105 ARG 105 C GLU 106 n 106 GLU 106 C GLY 107 n 107 GLY 107 C VAL 108 n 108 VAL 108 C CYS 109 n 109 CYS 109 C ASP 110 n 110 ASP 110 C ARG 111 n 111 ARG 111 C SER 112 n 112 SER 112 C THR 113 n 113 THR 113 C ALA 114 n 114 ALA 114 C PRO 115 n 115 PRO 115 C SER 116 n 116 SER 116 C VAL 117 n 117 VAL 117 C SER 118 n 118 SER 118 C ALA 119 n 119 ALA 119 C ILE 120 n 120 ILE 120 C SER 121 n 121 SER 121 C ARG 122 n 122 ARG 122 C LEU 123 n 123 LEU 123 C VAL 124 n 124 VAL 124 C n 125 125 C n 126 126 C n 127 127 C n 128 128 C author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C O ARG 4 C O ARG 4 C N PHE 12 C N PHE 12 1 C OG SER 71 C OG SER 71 1 Y 1 C CG LYS 72 C CG LYS 72 1 Y 1 C CD LYS 72 C CD LYS 72 1 Y 1 C CE LYS 72 C CE LYS 72 1 Y 1 C NZ LYS 72 C NZ LYS 72 1 Y 1 C CG PRO 73 C CG PRO 73 1 Y 1 C CD PRO 73 C CD PRO 73 1 Y 1 C CG1 ILE 75 C CG1 ILE 75 1 Y 1 C CG2 ILE 75 C CG2 ILE 75 1 Y 1 C CD1 ILE 75 C CD1 ILE 75 1 Y 1 C OG1 THR 77 C OG1 THR 77 1 Y 1 C CG2 THR 77 C CG2 THR 77 1 Y 1 C CG PRO 78 C CG PRO 78 1 Y 1 C CD PRO 78 C CD PRO 78 1 Y 1 C CG GLU 81 C CG GLU 81 1 Y 1 C CD GLU 81 C CD GLU 81 1 Y 1 C OE1 GLU 81 C OE1 GLU 81 1 Y 1 C OE2 GLU 81 C OE2 GLU 81 1 Y 1 C CG TYR 87 C CG TYR 87 1 Y 1 C CD1 TYR 87 C CD1 TYR 87 1 Y 1 C CD2 TYR 87 C CD2 TYR 87 1 Y 1 C CE1 TYR 87 C CE1 TYR 87 1 Y 1 C CE2 TYR 87 C CE2 TYR 87 1 Y 1 C CZ TYR 87 C CZ TYR 87 1 Y 1 C OH TYR 87 C OH TYR 87 1 Y 1 C CG ARG 89 C CG ARG 89 1 Y 1 C CD ARG 89 C CD ARG 89 1 Y 1 C NE ARG 89 C NE ARG 89 1 Y 1 C CZ ARG 89 C CZ ARG 89 1 Y 1 C NH1 ARG 89 C NH1 ARG 89 1 Y 1 C NH2 ARG 89 C NH2 ARG 89 1 Y 1 C OG SER 90 C OG SER 90 1 Y 1 C OG SER 91 C OG SER 91 1 Y 1 C CG PRO 92 C CG PRO 92 1 Y 1 C CD PRO 92 C CD PRO 92 1 Y 1 C CG ARG 122 C CG ARG 122 1 Y 1 C CD ARG 122 C CD ARG 122 1 Y 1 C NE ARG 122 C NE ARG 122 1 Y 1 C CZ ARG 122 C CZ ARG 122 1 Y 1 C NH1 ARG 122 C NH1 ARG 122 1 Y 1 C NH2 ARG 122 C NH2 ARG 122 1 Y 1 C CG1 VAL 124 C CG1 VAL 124 1 Y 1 C CG2 VAL 124 C CG2 VAL 124 1 Y 1 C GLY 1 C GLY 1 1 Y 1 C ARG 125 C ARG 125 1 Y 1 C GLY 126 C GLY 126 1 Y 1 C ARG 127 C ARG 127 1 Y 1 C ASP 128 C ASP 128 1 Y 1 -5.22 0.50 110.60 105.38 A A A C2 N3 C4 DA DA DA 1 1 1 N 1 -3.15 0.50 117.70 114.55 A A A C5 C6 N1 DA DA DA 1 1 1 N 1 -4.92 0.80 127.40 122.48 A A A N3 C4 N9 DA DA DA 1 1 1 N 1 -12.34 1.00 110.10 97.76 A A A C1' O4' C4' DA DA DA 2 2 2 N 1 -5.53 0.80 105.90 100.37 A A A O4' C1' C2' DA DA DA 2 2 2 N 1 2.78 0.30 108.30 111.08 A A A O4' C1' N1 DC DC DC 3 3 3 N 1 4.21 0.60 118.90 123.11 A A A N1 C2 O2 DC DC DC 3 3 3 N 1 -4.69 0.70 121.90 117.21 A A A N3 C2 O2 DC DC DC 3 3 3 N 1 2.57 0.30 108.30 110.87 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 -4.06 0.60 122.90 118.84 A A A C6 C5 C7 DT DT DT 5 5 5 N 1 8.14 1.20 119.70 127.84 A A A C3' O3' P DC DC DA 6 6 7 Y 1 -5.02 0.70 108.00 102.98 A A A O4' C1' N9 DA DA DA 7 7 7 N 1 -4.81 0.80 105.90 101.09 A A A O4' C1' C2' DC DC DC 8 8 8 N 1 -6.61 1.00 110.10 103.49 A A A C1' O4' C4' DG DG DG 10 10 10 N 1 -4.80 0.70 102.20 97.40 A A A C4' C3' C2' DG DG DG 10 10 10 N 1 -4.64 0.60 122.90 118.26 A A A C6 C5 C7 DT DT DT 11 11 11 N 1 2.56 0.30 108.30 110.86 A A A O4' C1' N1 DC DC DC 15 15 15 N 1 3.69 0.60 106.00 109.69 B B B O4' C4' C3' DT DT DT 16 16 16 N 1 1.83 0.30 108.30 110.13 B B B O4' C1' N1 DT DT DT 16 16 16 N 1 -5.16 0.80 105.90 100.74 B B B O4' C1' C2' DT DT DT 17 17 17 N 1 -5.34 0.60 122.30 116.96 B B B N3 C2 O2 DT DT DT 17 17 17 N 1 4.10 0.60 118.00 122.10 B B B C4 C5 C6 DT DT DT 19 19 19 N 1 1.96 0.30 108.30 110.26 B B B O4' C1' N9 DA DA DA 21 21 21 N 1 -6.37 0.70 102.20 95.83 B B B C4' C3' C2' DA DA DA 22 22 22 N 1 2.56 0.30 108.30 110.86 B B B O4' C1' N9 DA DA DA 22 22 22 N 1 -5.43 0.80 105.90 100.47 B B B O4' C1' C2' DC DC DC 23 23 23 N 1 4.46 0.30 108.30 112.76 B B B O4' C1' N1 DC DC DC 23 23 23 N 1 -3.19 0.40 104.50 101.31 B B B O4' C4' C3' DC DC DC 24 24 24 N 1 2.30 0.30 108.30 110.60 B B B O4' C1' N9 DG DG DG 25 25 25 N 1 -2.97 0.40 106.40 103.43 B B B C8 N9 C4 DG DG DG 25 25 25 N 1 2.46 0.40 105.40 107.86 B B B N9 C4 C5 DG DG DG 25 25 25 N 1 7.25 1.20 119.70 126.95 B B B C3' O3' P DG DG DT 25 25 26 Y 1 3.89 0.60 118.00 121.89 B B B C4 C5 C6 DT DT DT 26 26 26 N 1 -4.79 0.60 122.30 117.51 B B B N3 C2 O2 DT DT DT 26 26 26 N 1 -5.58 0.80 105.90 100.32 B B B O4' C1' C2' DG DG DG 27 27 27 N 1 3.64 0.30 108.30 111.94 B B B O4' C1' N9 DA DA DA 28 28 28 N 1 2.46 0.30 108.30 110.76 B B B O4' C1' N1 DC DC DC 29 29 29 N 1 8.94 1.20 103.30 112.24 C C C N CA CB PRO PRO PRO 78 78 78 N 1 A A C5' C4' DA DA 1 1 0.045 0.007 1.512 1.557 N 1 A A N9 C4 DA DA 1 1 -0.044 0.006 1.374 1.330 N 1 B B C5 C7 DT DT 17 17 0.047 0.006 1.496 1.543 N 1 B B C3' C2' DC DC 23 23 -0.049 0.008 1.516 1.467 N 1 B B O3' C3' DC DC 23 23 -0.039 0.006 1.419 1.380 N 1 B B O3' C3' DC DC 24 24 -0.045 0.006 1.419 1.374 N 1 B B C6 N1 DT DT 26 26 -0.044 0.007 1.378 1.334 N 1 C ARG 44 72.34 38.68 1 C ALA 76 -101.81 66.18 1 C PRO 78 110.68 -173.95 1 C TYR 87 -81.78 35.48 1 C SER 91 18.80 -88.62 0.2840000 0.2340000 0.2340000 2.500 20.000 9285 10.00 92.500 1 0.000 2.500 20.000 13 1534 0 609 912 0.017 3.50 28.4 0.80 2.500 20.000 1PDN 40156 9285 0.0750000 1 4.680 refinement X-PLOR data reduction DENZO CRYSTAL STRUCTURE OF A PAIRED DOMAIN-DNA COMPLEX AT 2.5 ANGSTROMS RESOLUTION REVEALS STRUCTURAL BASIS FOR PAX DEVELOPMENTAL MUTATIONS 1 N N 2 N N 3 N N 4 N N 4 N N C ASN 20 C ASN 20 HELX_P C ASP 32 C ASP 32 1 1 13 C PRO 36 C PRO 36 HELX_P C LEU 43 C LEU 43 1 2 8 C HIS 47 C HIS 47 HELX_P C THR 60 C THR 60 1 3 14 C ILE 80 C ILE 80 HELX_P C GLU 86 C GLU 86 1 4 7 C SER 96 C SER 96 HELX_P C ARG 105 C ARG 105 1 5 10 C VAL 117 C VAL 117 HELX_P C LEU 123 C LEU 123 1 6 7 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 30 B N1 DG 15 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 30 B O6 DG 15 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 30 B N2 DG 15 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 29 B N3 DC 14 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 29 B O2 DC 14 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 29 B N4 DC 14 1_555 hydrog WATSON-CRICK A DT 5 A N3 DT 5 1_555 B DA 28 B N1 DA 13 1_555 hydrog WATSON-CRICK A DT 5 A O4 DT 5 1_555 B DA 28 B N6 DA 13 1_555 hydrog WATSON-CRICK A DC 6 A N3 DC 6 1_555 B DG 27 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 6 A N4 DC 6 1_555 B DG 27 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 6 A O2 DC 6 1_555 B DG 27 B N2 DG 12 1_555 hydrog WATSON-CRICK A DA 7 A N1 DA 7 1_555 B DT 26 B N3 DT 11 1_555 hydrog WATSON-CRICK A DA 7 A N6 DA 7 1_555 B DT 26 B O4 DT 11 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 25 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 25 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 25 B N2 DG 10 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 24 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 24 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 24 B N4 DC 9 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 23 B N3 DC 8 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 23 B O2 DC 8 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 23 B N4 DC 8 1_555 hydrog WATSON-CRICK A DT 11 A N3 DT 11 1_555 B DA 22 B N1 DA 7 1_555 hydrog WATSON-CRICK A DT 11 A O4 DT 11 1_555 B DA 22 B N6 DA 7 1_555 hydrog WATSON-CRICK A DT 12 A N3 DT 12 1_555 B DA 21 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 12 A O4 DT 12 1_555 B DA 21 B N6 DA 6 1_555 hydrog WATSON-CRICK A DG 13 A N1 DG 13 1_555 B DC 20 B N3 DC 5 1_555 hydrog WATSON-CRICK A DG 13 A N2 DG 13 1_555 B DC 20 B O2 DC 5 1_555 hydrog WATSON-CRICK A DG 13 A O6 DG 13 1_555 B DC 20 B N4 DC 5 1_555 hydrog WATSON-CRICK A DA 14 A N1 DA 14 1_555 B DT 19 B N3 DT 4 1_555 hydrog WATSON-CRICK A DA 14 A N6 DA 14 1_555 B DT 19 B O4 DT 4 1_555 hydrog WATSON-CRICK A DC 15 A N3 DC 15 1_555 B DG 18 B N1 DG 3 1_555 hydrog WATSON-CRICK A DC 15 A N4 DC 15 1_555 B DG 18 B O6 DG 3 1_555 hydrog WATSON-CRICK A DC 15 A O2 DC 15 1_555 B DG 18 B N2 DG 3 1_555 GENE REGULATION/DNA PROTEIN-DNA COMPLEX, DOUBLE HELIX, PAX, PRD, PAIRED DOMAIN, DNA-BINDING PROTEIN, GENE REGULATION-DNA COMPLEX PRD_DROME UNP 3 P06601 1PDN PDB 1 1PDN 1PDN PDB 2 1PDN 27 154 1PDN 1 128 P06601 C 1 1 128 1 15 1PDN 1 15 1PDN A 2 1 15 16 30 1PDN 16 30 1PDN B 3 1 15 2 anti-parallel C GLY 3 C GLY 3 C VAL 5 C VAL 5 C VAL 11 C VAL 11 C ILE 13 C ILE 13 19 P 21 21 21