1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Eriksson, M. Nielsen, P.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C11 H16 N7 O3 1 294.290 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADENINE peptide-like C10 H16 N5 O4 1 270.265 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE peptide-like C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C11 H16 N7 O4 1 310.289 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUANINE peptide-like H2 N 16.023 AMINO GROUP non-polymer C11 H17 N4 O5 1 285.276 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE peptide-like N 1 N C N 2 N C N 3 N O N 4 N C N 5 N C N 6 N O N 7 N O N 8 N N N 9 N C N 10 N C N 11 N N Y 12 N N Y 13 N C Y 14 N N Y 15 N C Y 16 N C N 17 N N Y 18 N N Y 19 N C Y 20 N N Y 21 N C N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N C N 39 N C N 40 N O N 41 N C N 42 N C N 43 N O N 44 N O N 45 N N N 46 N C N 47 N C N 48 N N N 49 N N N 50 N C N 51 N N N 52 N C N 53 N C N 54 N C N 55 N O N 56 N N N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 N C N 84 R C Y 85 N N Y 86 N C Y 87 N N Y 88 N C Y 89 N C N 90 N N Y 91 N N Y 92 N C Y 93 N N Y 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N O N 110 N P N 111 N O N 112 N O N 113 N O N 114 N C N 115 R C N 116 N O N 117 S C N 118 N O N 119 N C N 120 R C N 121 N N N 122 N C N 123 N O N 124 N N N 125 N C N 126 N N N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N O N 144 N P N 145 N O N 146 N O N 147 N O N 148 N C N 149 R C N 150 N O N 151 S C N 152 N O N 153 N C N 154 R C Y 155 N N Y 156 N C Y 157 N N Y 158 N C N 159 N C N 160 N O N 161 N N N 162 N C N 163 N N N 164 N N Y 165 N C N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N O N 181 N P N 182 N O N 183 N O N 184 N O N 185 N C N 186 R C N 187 N O N 188 S C N 189 N O N 190 N C N 191 R C N 192 N N N 193 N C N 194 N O N 195 N N N 196 N C N 197 N O N 198 N C N 199 N C N 200 N C N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N C N 217 N C N 218 N O N 219 N C N 220 N C N 221 N O N 222 N O N 223 N N N 224 N C N 225 N C N 226 N N Y 227 N N Y 228 N C Y 229 N N Y 230 N C N 231 N C N 232 N O N 233 N N N 234 N C N 235 N N N 236 N N Y 237 N C N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 N H N 256 N H N 257 N C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N O N 263 N O N 264 N N N 265 N C N 266 N C N 267 N N N 268 N N N 269 N C N 270 N C N 271 N O N 272 N N N 273 N C N 274 N O N 275 N C N 276 N C N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N doub N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N doub N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N doub N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing Y 102 N sing Y 103 N doub N 104 N sing Y 105 N doub N 106 N sing N 107 N sing Y 108 N sing Y 109 N doub N 110 N sing Y 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing Y 170 N sing Y 171 N sing Y 172 N doub N 173 N sing Y 174 N sing N 175 N sing Y 176 N doub N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N doub N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing Y 246 N sing Y 247 N sing Y 248 N doub N 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N doub N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 3 410 413 10.1038/nsb0596-410 8612069 Solution structure of a peptide nucleic acid-DNA duplex. 1996 US Biochemistry BICHAW 0033 0006-2960 33 9820 Structural Characterization of Pna-DNA Duplexes by NMR. Evidence for DNA in a B-Like Conformation 1994 10.2210/pdb1pdt/pdb pdb_00001pdt 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2435.631 DNA (5'-D(*GP*AP*CP*AP*TP*AP*GP*C)-3' 1 syn polymer PNA-DNA DUPLEX 2120.155 PEPTIDE NUCLEIC ACID (COOH-P(*G*C*T*A*T*G*T*C)-NH2) 1 syn polymer PNA no no (DG)(DA)(DC)(DA)(DT)(DA)(DG)(DC) GACATAGC A polydeoxyribonucleotide no yes (GPN)(CPN)(TPN)(APN)(TPN)(GPN)(TPN)(CPN)(NH2) XXXXXXXXX B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n 15.617 1 19 A 1 B 16 -1.845 A_DG1:CPN16_B 1 15.050 -0.745 0.277 -0.311 17.882 1 20 A 2 B 15 -4.890 A_DA2:TPN15_B 2 -9.948 -0.076 -0.297 -0.118 20.844 1 19 A 3 B 14 -2.134 A_DC3:GPN14_B 3 -5.040 0.673 -0.455 -0.249 16.845 1 20 A 4 B 13 -2.221 A_DA4:TPN13_B 4 -4.901 0.304 -0.038 -0.128 14.225 1 20 A 5 B 12 -8.447 A_DT5:APN12_B 5 5.775 -0.352 -0.355 -0.070 8.040 1 20 A 6 B 11 -1.613 A_DA6:TPN11_B 6 -4.137 0.490 -0.047 -0.130 -5.812 1 19 A 7 B 10 0.159 A_DG7:CPN10_B 7 -15.283 -0.324 -0.301 -0.185 37.293 1 19 A 8 B 9 -1.239 A_DC8:GPN9_B 8 -25.743 0.671 -0.435 -0.147 3.422 32.530 A A 1 2 -7.058 B B 16 15 3.243 -3.939 -0.411 -2.136 AA_DG1DA2:TPN15CPN16_BB 1 2.984 -5.347 32.163 -3.109 1.269 3.098 30.186 A A 2 3 5.845 B B 15 14 3.188 3.031 -0.907 -1.681 AA_DA2DC3:GPN14TPN15_BB 2 -3.941 7.600 29.783 -3.823 0.966 1.773 29.482 A A 3 4 32.820 B B 14 13 3.254 15.368 -1.661 -2.643 AA_DC3DA4:TPN13GPN14_BB 3 -11.708 25.003 22.376 -8.077 1.067 3.084 25.692 A A 4 5 5.642 B B 13 12 3.337 2.501 -0.692 -3.002 AA_DA4DT5:APN12TPN13_BB 4 -2.403 5.421 25.460 -7.446 0.889 4.136 32.126 A A 5 6 -28.887 B B 12 11 3.745 -15.320 0.146 -1.873 AA_DT5DA6:TPN11APN12_BB 5 -4.037 7.612 28.038 0.164 -1.199 3.815 30.220 A A 6 7 -5.522 B B 11 10 3.691 -2.874 -0.834 -1.701 AA_DA6DG7:CPN10TPN11_BB 6 0.623 -1.197 30.080 -2.592 1.746 2.530 29.563 A A 7 8 -12.836 B B 10 9 2.331 -6.421 -1.114 -0.206 AA_DG7DC8:GPN9CPN10_BB 7 -7.951 15.896 27.777 0.641 0.888 atom_site chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_conn struct_site repository Initial release Version format compliance Non-polymer description Version format compliance Atomic model Data collection Database references Derived calculations Other 1 0 1996-10-14 1 1 2008-03-24 1 2 2011-07-13 2 0 2023-11-15 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.label_atom_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr2_label_atom_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1996-03-28 REL REL 8 BRUNGER refinement X-PLOR 3.1 G 1 n 1 DG 1 A A 2 n 2 DA 2 A C 3 n 3 DC 3 A A 4 n 4 DA 4 A T 5 n 5 DT 5 A A 6 n 6 DA 6 A G 7 n 7 DG 7 A C 8 n 8 DC 8 A GPN 9 n 1 GPN 9 B CPN 10 n 2 CPN 10 B TPN 11 n 3 TPN 11 B APN 12 n 4 APN 12 B TPN 13 n 5 TPN 13 B GPN 14 n 6 GPN 14 B TPN 15 n 7 TPN 15 B CPN 16 n 8 CPN 16 B NH2 17 n 9 NH2 17 B author_defined_assembly 2 dimeric B GPN 9 B GPN 1 DG B CPN 10 B CPN 2 DC B TPN 11 B TPN 3 DT B APN 12 B APN 4 DA B TPN 13 B TPN 5 DT B GPN 14 B GPN 6 DG B TPN 15 B TPN 7 DT B CPN 16 B CPN 8 DC 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A B O4' HN1 DC NH2 3 17 1.54 3 A B O4' HN1 DC NH2 3 17 1.54 5 A B O4' HN2 DC NH2 3 17 1.51 7 A B O4' HN2 DC NH2 3 17 1.52 2 A DG 7 0.052 SIDE CHAIN 4 A DG 7 0.052 SIDE CHAIN 6 A DG 7 0.049 SIDE CHAIN 7 A DA 4 0.053 SIDE CHAIN 8 A DG 7 0.054 SIDE CHAIN 1 3.06 0.30 108.30 111.36 A A A O4' C1' N9 DG DG DG 1 1 1 N 1 2.88 0.30 108.30 111.18 A A A O4' C1' N9 DA DA DA 2 2 2 N 1 2.47 0.30 108.30 110.77 A A A O4' C1' N1 DC DC DC 3 3 3 N 1 3.88 0.30 108.30 112.18 A A A O4' C1' N9 DA DA DA 4 4 4 N 1 2.69 0.30 108.30 110.99 A A A O4' C1' N1 DT DT DT 5 5 5 N 1 -4.02 0.60 122.90 118.88 A A A C6 C5 C7 DT DT DT 5 5 5 N 1 3.07 0.30 108.30 111.37 A A A O4' C1' N9 DA DA DA 6 6 6 N 1 2.01 0.30 108.30 110.31 A A A O4' C1' N9 DG DG DG 7 7 7 N 1 2.36 0.30 108.30 110.66 A A A O4' C1' N1 DC DC DC 8 8 8 N 2 3.24 0.30 108.30 111.54 A A A O4' C1' N9 DG DG DG 1 1 1 N 2 2.70 0.30 108.30 111.00 A A A O4' C1' N9 DA DA DA 2 2 2 N 2 2.51 0.30 108.30 110.81 A A A O4' C1' N1 DC DC DC 3 3 3 N 2 3.68 0.30 108.30 111.98 A A A O4' C1' N9 DA DA DA 4 4 4 N 2 3.62 0.30 108.30 111.92 A A A O4' C1' N1 DT DT DT 5 5 5 N 2 -4.01 0.60 122.90 118.89 A A A C6 C5 C7 DT DT DT 5 5 5 N 2 3.01 0.30 108.30 111.31 A A A O4' C1' N9 DA DA DA 6 6 6 N 2 3.50 0.30 108.30 111.80 A A A O4' C1' N9 DG DG DG 7 7 7 N 2 2.08 0.30 108.30 110.38 A A A O4' C1' N1 DC DC DC 8 8 8 N 3 3.06 0.30 108.30 111.36 A A A O4' C1' N9 DG DG DG 1 1 1 N 3 2.81 0.30 108.30 111.11 A A A O4' C1' N9 DA DA DA 2 2 2 N 3 2.45 0.30 108.30 110.75 A A A O4' C1' N1 DC DC DC 3 3 3 N 3 3.93 0.30 108.30 112.23 A A A O4' C1' N9 DA DA DA 4 4 4 N 3 2.90 0.30 108.30 111.20 A A A O4' C1' N1 DT DT DT 5 5 5 N 3 -3.99 0.60 122.90 118.91 A A A C6 C5 C7 DT DT DT 5 5 5 N 3 3.18 0.30 108.30 111.48 A A A O4' C1' N9 DA DA DA 6 6 6 N 3 1.95 0.30 108.30 110.25 A A A O4' C1' N9 DG DG DG 7 7 7 N 3 2.96 0.30 108.30 111.26 A A A O4' C1' N1 DC DC DC 8 8 8 N 4 3.08 0.30 108.30 111.38 A A A O4' C1' N9 DG DG DG 1 1 1 N 4 2.83 0.30 108.30 111.13 A A A O4' C1' N9 DA DA DA 2 2 2 N 4 2.38 0.30 108.30 110.68 A A A O4' C1' N1 DC DC DC 3 3 3 N 4 3.53 0.30 108.30 111.83 A A A O4' C1' N9 DA DA DA 4 4 4 N 4 3.62 0.30 108.30 111.92 A A A O4' C1' N1 DT DT DT 5 5 5 N 4 -3.98 0.60 122.90 118.92 A A A C6 C5 C7 DT DT DT 5 5 5 N 4 2.87 0.30 108.30 111.17 A A A O4' C1' N9 DA DA DA 6 6 6 N 4 3.44 0.30 108.30 111.74 A A A O4' C1' N9 DG DG DG 7 7 7 N 4 1.97 0.30 108.30 110.27 A A A O4' C1' N1 DC DC DC 8 8 8 N 5 3.11 0.30 108.30 111.41 A A A O4' C1' N9 DG DG DG 1 1 1 N 5 2.95 0.30 108.30 111.25 A A A O4' C1' N9 DA DA DA 2 2 2 N 5 2.46 0.30 108.30 110.76 A A A O4' C1' N1 DC DC DC 3 3 3 N 5 3.93 0.30 108.30 112.23 A A A O4' C1' N9 DA DA DA 4 4 4 N 5 2.87 0.30 108.30 111.17 A A A O4' C1' N1 DT DT DT 5 5 5 N 5 -3.90 0.60 122.90 119.00 A A A C6 C5 C7 DT DT DT 5 5 5 N 5 3.09 0.30 108.30 111.39 A A A O4' C1' N9 DA DA DA 6 6 6 N 5 2.03 0.30 108.30 110.33 A A A O4' C1' N9 DG DG DG 7 7 7 N 5 3.05 0.30 108.30 111.35 A A A O4' C1' N1 DC DC DC 8 8 8 N 6 3.22 0.30 108.30 111.52 A A A O4' C1' N9 DG DG DG 1 1 1 N 6 2.61 0.30 108.30 110.91 A A A O4' C1' N9 DA DA DA 2 2 2 N 6 2.67 0.30 108.30 110.97 A A A O4' C1' N1 DC DC DC 3 3 3 N 6 3.71 0.30 108.30 112.01 A A A O4' C1' N9 DA DA DA 4 4 4 N 6 3.71 0.30 108.30 112.01 A A A O4' C1' N1 DT DT DT 5 5 5 N 6 -4.02 0.60 122.90 118.88 A A A C6 C5 C7 DT DT DT 5 5 5 N 6 2.91 0.30 108.30 111.21 A A A O4' C1' N9 DA DA DA 6 6 6 N 6 3.54 0.30 108.30 111.84 A A A O4' C1' N9 DG DG DG 7 7 7 N 6 2.05 0.30 108.30 110.35 A A A O4' C1' N1 DC DC DC 8 8 8 N 7 3.14 0.30 108.30 111.44 A A A O4' C1' N9 DG DG DG 1 1 1 N 7 2.72 0.30 108.30 111.02 A A A O4' C1' N9 DA DA DA 2 2 2 N 7 2.67 0.30 108.30 110.97 A A A O4' C1' N1 DC DC DC 3 3 3 N 7 4.04 0.30 108.30 112.34 A A A O4' C1' N9 DA DA DA 4 4 4 N 7 2.95 0.30 108.30 111.25 A A A O4' C1' N1 DT DT DT 5 5 5 N 7 -4.04 0.60 122.90 118.86 A A A C6 C5 C7 DT DT DT 5 5 5 N 7 2.92 0.30 108.30 111.22 A A A O4' C1' N9 DA DA DA 6 6 6 N 7 2.02 0.30 108.30 110.32 A A A O4' C1' N9 DG DG DG 7 7 7 N 7 2.37 0.30 108.30 110.67 A A A O4' C1' N1 DC DC DC 8 8 8 N 8 3.11 0.30 108.30 111.41 A A A O4' C1' N9 DG DG DG 1 1 1 N 8 2.81 0.30 108.30 111.11 A A A O4' C1' N9 DA DA DA 2 2 2 N 8 2.44 0.30 108.30 110.74 A A A O4' C1' N1 DC DC DC 3 3 3 N 8 3.73 0.30 108.30 112.03 A A A O4' C1' N9 DA DA DA 4 4 4 N 8 3.67 0.30 108.30 111.97 A A A O4' C1' N1 DT DT DT 5 5 5 N 8 -4.02 0.60 122.90 118.88 A A A C6 C5 C7 DT DT DT 5 5 5 N 8 2.97 0.30 108.30 111.27 A A A O4' C1' N9 DA DA DA 6 6 6 N 8 3.52 0.30 108.30 111.82 A A A O4' C1' N9 DG DG DG 7 7 7 N 8 1.98 0.30 108.30 110.28 A A A O4' C1' N1 DC DC DC 8 8 8 N model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 PD235, PNA-DNA DUPLEX, NMR, 8 STRUCTURES 1 N N 2 N N covale 1.314 both B GPN 9 B C GPN 1 1_555 B CPN 10 B N CPN 2 1_555 covale 1.310 both B CPN 10 B C CPN 2 1_555 B TPN 11 B N TPN 3 1_555 covale 1.310 both B TPN 11 B C TPN 3 1_555 B APN 12 B N APN 4 1_555 covale 1.307 both B APN 12 B C APN 4 1_555 B TPN 13 B N TPN 5 1_555 covale 1.307 both B TPN 13 B C TPN 5 1_555 B GPN 14 B N GPN 6 1_555 covale 1.307 both B GPN 14 B C GPN 6 1_555 B TPN 15 B N TPN 7 1_555 covale 1.310 both B TPN 15 B C TPN 7 1_555 B CPN 16 B N CPN 8 1_555 covale 1.304 both B CPN 16 B C CPN 8 1_555 B NH2 17 B N NH2 9 1_555 covale 1.092 one B CPN 16 B O CPN 8 1_555 B NH2 17 B N NH2 9 1_555 hydrog WATSON-CRICK A DG 1 A N1 DG 1 1_555 B CPN 16 B N3 CPN 8 1_555 hydrog WATSON-CRICK A DG 1 A N2 DG 1 1_555 B CPN 16 B O2 CPN 8 1_555 hydrog WATSON-CRICK A DG 1 A O6 DG 1 1_555 B CPN 16 B N4 CPN 8 1_555 hydrog WATSON-CRICK A DA 2 A N1 DA 2 1_555 B TPN 15 B N3 TPN 7 1_555 hydrog WATSON-CRICK A DA 2 A N6 DA 2 1_555 B TPN 15 B O4 TPN 7 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B GPN 14 B N1 GPN 6 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B GPN 14 B O6 GPN 6 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B GPN 14 B N2 GPN 6 1_555 hydrog WATSON-CRICK A DA 4 A N1 DA 4 1_555 B TPN 13 B N3 TPN 5 1_555 hydrog WATSON-CRICK A DA 4 A N6 DA 4 1_555 B TPN 13 B O4 TPN 5 1_555 hydrog WATSON-CRICK A DT 5 A N3 DT 5 1_555 B APN 12 B N1 APN 4 1_555 hydrog WATSON-CRICK A DT 5 A O4 DT 5 1_555 B APN 12 B N6 APN 4 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B TPN 11 B N3 TPN 3 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B TPN 11 B O4 TPN 3 1_555 hydrog WATSON-CRICK A DG 7 A N1 DG 7 1_555 B CPN 10 B N3 CPN 2 1_555 hydrog WATSON-CRICK A DG 7 A N2 DG 7 1_555 B CPN 10 B O2 CPN 2 1_555 hydrog WATSON-CRICK A DG 7 A O6 DG 7 1_555 B CPN 10 B N4 CPN 2 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B GPN 9 B N1 GPN 1 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B GPN 9 B O6 GPN 1 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B GPN 9 B N2 GPN 1 1_555 PEPTIDE NUCLEIC ACID/DNA COMPLEX (PEPTIDE NUCLEIC ACID-DNA), NUCLEIC ACID COMPLEX, DUPLEX, HYBRID, PEPTIDE NUCLEIC ACID-DNA complex 1PDT PDB 1 1PDT 1PDT PDB 2 1PDT 1 8 1PDT 1 8 1PDT A 1 1 8 9 17 1PDT 9 17 1PDT B 2 1 9 BINDING SITE FOR RESIDUE NH2 B 17 B NH2 17 Software 2 A DC 3 A DC 3 2 1_555 B CPN 16 B CPN 8 2 1_555 1 P 1