1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Dunne, S.J.
Cornell, R.B.
Johnson, J.E.
Glover, N.R.
Tracey, A.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
35
11975
11984
10.1021/bi960821+
8810902
Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
1996
US
Biochemistry
BICHAW
0033
0006-2960
33
4327
4335
8155650
Membrane-Binding Amphipathic Alpha-Helical Peptide Derived from Ctp:Phosphocholine Cytidylyltransferase
1994
10.2210/pdb1peh/pdb
pdb_00001peh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
4148.823
PEPNH1
2.7.7.15
RESIDUES 236 - 268
F263W
1
syn
polymer
CYTIDYLYLTRANSFERASE MEMBRANE BINDING DOMAIN PEPTIDE
no
yes
(ACE)NEKKYHLQERVDKVKKKVKDVEEKSKEWVQKVE(NH2)
XNEKKYHLQERVDKVKKKVKDVEEKSKEWVQKVEX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
citation
entity
entity_src_gen
pdbx_database_status
pdbx_entity_src_syn
pdbx_nmr_ensemble
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_assembly_prop
pdbx_struct_oper_list
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
Source and taxonomy
Structure summary
Database references
Derived calculations
1
0
1996-12-07
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-03-14
1
4
2021-11-03
_citation.page_last
_citation.pdbx_database_id_PubMed
_entity.src_method
_pdbx_database_status.process_site
_pdbx_nmr_ensemble.conformer_selection_criteria
_pdbx_nmr_spectrometer.field_strength
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1996-06-10
REL
REL
10116
Norway rat
Rattus norvegicus
sample
all calculated structures submitted
10
10
COSY
TOCSY
NOESY
5.20
298
K
RESTRAINED DISTANCE GEOMETRY
BIOSYM
refinement
DGII
structure solution
BIOSYM MOLECULAR SIMULATIONS/FELIX
SIMULATIONS/FELIX
600
Bruker
AMX600
ACE
235
n
1
ACE
235
A
ASN
236
n
2
ASN
236
A
GLU
237
n
3
GLU
237
A
LYS
238
n
4
LYS
238
A
LYS
239
n
5
LYS
239
A
TYR
240
n
6
TYR
240
A
HIS
241
n
7
HIS
241
A
LEU
242
n
8
LEU
242
A
GLN
243
n
9
GLN
243
A
GLU
244
n
10
GLU
244
A
ARG
245
n
11
ARG
245
A
VAL
246
n
12
VAL
246
A
ASP
247
n
13
ASP
247
A
LYS
248
n
14
LYS
248
A
VAL
249
n
15
VAL
249
A
LYS
250
n
16
LYS
250
A
LYS
251
n
17
LYS
251
A
LYS
252
n
18
LYS
252
A
VAL
253
n
19
VAL
253
A
LYS
254
n
20
LYS
254
A
ASP
255
n
21
ASP
255
A
VAL
256
n
22
VAL
256
A
GLU
257
n
23
GLU
257
A
GLU
258
n
24
GLU
258
A
LYS
259
n
25
LYS
259
A
SER
260
n
26
SER
260
A
LYS
261
n
27
LYS
261
A
GLU
262
n
28
GLU
262
A
TRP
263
n
29
TRP
263
A
VAL
264
n
30
VAL
264
A
GLN
265
n
31
GLN
265
A
LYS
266
n
32
LYS
266
A
VAL
267
n
33
VAL
267
A
GLU
268
n
34
GLU
268
A
NH2
269
n
35
NH2
269
A
author_defined_assembly
1
monomeric
270
1
4230
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
HD12
HG22
LEU
VAL
242
246
1.32
2
A
A
HD23
HB3
LEU
ARG
242
245
1.29
4
A
A
HG12
HZ3
VAL
LYS
249
252
1.32
4
A
A
HD11
HB2
LEU
ARG
242
245
1.33
10
A
A
HD12
HG21
LEU
VAL
242
246
1.27
1
4.11
0.50
120.30
124.41
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
2
4.00
0.50
120.30
124.30
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
3
4.04
0.50
120.30
124.34
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
4
4.03
0.50
120.30
124.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
5
4.06
0.50
120.30
124.36
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
5
-5.40
0.90
118.30
112.90
A
A
A
CB
CG
OD2
ASP
ASP
ASP
247
247
247
N
6
-9.74
1.60
129.70
119.96
A
A
A
CB
CG
CD2
HIS
HIS
HIS
241
241
241
N
6
4.02
0.50
120.30
124.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
7
4.03
0.50
120.30
124.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
8
4.05
0.50
120.30
124.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
9
-9.76
1.60
129.70
119.94
A
A
A
CB
CG
CD2
HIS
HIS
HIS
241
241
241
N
9
4.04
0.50
120.30
124.34
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
10
-10.05
1.60
129.70
119.65
A
A
A
CB
CG
CD2
HIS
HIS
HIS
241
241
241
N
10
4.05
0.50
120.30
124.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
245
245
245
N
1
A
A
CD
OE1
GLU
GLU
237
237
0.111
0.011
1.252
1.363
N
1
A
A
CD
OE1
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
1
A
A
CD
OE2
GLU
GLU
257
257
0.111
0.011
1.252
1.363
N
1
A
A
CD
OE2
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
1
A
A
CD
OE1
GLU
GLU
262
262
0.109
0.011
1.252
1.361
N
1
A
A
CD
OE1
GLU
GLU
268
268
0.116
0.011
1.252
1.368
N
2
A
A
CD
OE2
GLU
GLU
237
237
0.110
0.011
1.252
1.362
N
2
A
A
CD
OE1
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
2
A
A
CD
OE1
GLU
GLU
257
257
0.110
0.011
1.252
1.362
N
2
A
A
CD
OE2
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
2
A
A
CD
OE2
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
2
A
A
CD
OE2
GLU
GLU
268
268
0.115
0.011
1.252
1.367
N
3
A
A
CD
OE1
GLU
GLU
237
237
0.111
0.011
1.252
1.363
N
3
A
A
CD
OE2
GLU
GLU
244
244
0.111
0.011
1.252
1.363
N
3
A
A
CD
OE1
GLU
GLU
257
257
0.111
0.011
1.252
1.363
N
3
A
A
CD
OE2
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
3
A
A
CD
OE2
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
3
A
A
CD
OE2
GLU
GLU
268
268
0.117
0.011
1.252
1.369
N
4
A
A
CD
OE1
GLU
GLU
237
237
0.110
0.011
1.252
1.362
N
4
A
A
CD
OE1
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
4
A
A
CD
OE1
GLU
GLU
257
257
0.109
0.011
1.252
1.361
N
4
A
A
CD
OE2
GLU
GLU
258
258
0.112
0.011
1.252
1.364
N
4
A
A
CD
OE1
GLU
GLU
262
262
0.109
0.011
1.252
1.361
N
4
A
A
CD
OE2
GLU
GLU
268
268
0.115
0.011
1.252
1.367
N
5
A
A
CD
OE1
GLU
GLU
237
237
0.111
0.011
1.252
1.363
N
5
A
A
CD
OE2
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
5
A
A
CD
OE1
GLU
GLU
257
257
0.109
0.011
1.252
1.361
N
5
A
A
CD
OE1
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
5
A
A
CD
OE2
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
5
A
A
CD
OE1
GLU
GLU
268
268
0.113
0.011
1.252
1.365
N
6
A
A
CD
OE2
GLU
GLU
237
237
0.111
0.011
1.252
1.363
N
6
A
A
CD
OE2
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
6
A
A
CD
OE1
GLU
GLU
257
257
0.110
0.011
1.252
1.362
N
6
A
A
CD
OE2
GLU
GLU
258
258
0.109
0.011
1.252
1.361
N
6
A
A
CD
OE2
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
6
A
A
CD
OE2
GLU
GLU
268
268
0.112
0.011
1.252
1.364
N
7
A
A
CD
OE2
GLU
GLU
237
237
0.111
0.011
1.252
1.363
N
7
A
A
CD
OE1
GLU
GLU
244
244
0.109
0.011
1.252
1.361
N
7
A
A
CD
OE2
GLU
GLU
257
257
0.110
0.011
1.252
1.362
N
7
A
A
CD
OE2
GLU
GLU
258
258
0.109
0.011
1.252
1.361
N
7
A
A
CD
OE2
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
7
A
A
CD
OE2
GLU
GLU
268
268
0.115
0.011
1.252
1.367
N
8
A
A
CD
OE2
GLU
GLU
237
237
0.112
0.011
1.252
1.364
N
8
A
A
CD
OE1
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
8
A
A
CD
OE2
GLU
GLU
257
257
0.110
0.011
1.252
1.362
N
8
A
A
CD
OE2
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
8
A
A
CD
OE1
GLU
GLU
262
262
0.109
0.011
1.252
1.361
N
8
A
A
CD
OE2
GLU
GLU
268
268
0.115
0.011
1.252
1.367
N
9
A
A
CD
OE1
GLU
GLU
237
237
0.111
0.011
1.252
1.363
N
9
A
A
CD
OE2
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
9
A
A
CD
OE1
GLU
GLU
257
257
0.110
0.011
1.252
1.362
N
9
A
A
CD
OE1
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
9
A
A
CD
OE2
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
9
A
A
CD
OE2
GLU
GLU
268
268
0.115
0.011
1.252
1.367
N
10
A
A
CD
OE2
GLU
GLU
237
237
0.110
0.011
1.252
1.362
N
10
A
A
CD
OE2
GLU
GLU
244
244
0.110
0.011
1.252
1.362
N
10
A
A
CD
OE2
GLU
GLU
257
257
0.110
0.011
1.252
1.362
N
10
A
A
CD
OE1
GLU
GLU
258
258
0.110
0.011
1.252
1.362
N
10
A
A
CD
OE1
GLU
GLU
262
262
0.110
0.011
1.252
1.362
N
10
A
A
CD
OE1
GLU
GLU
268
268
0.116
0.011
1.252
1.368
N
1
A
TYR
240
-86.14
-86.40
1
A
HIS
241
29.59
47.89
1
A
LEU
242
-104.64
50.16
1
A
ARG
245
-150.78
-43.54
2
A
TYR
240
-84.21
-88.47
2
A
HIS
241
30.51
45.06
2
A
GLU
244
-95.26
37.22
2
A
ARG
245
-152.41
-40.47
3
A
LYS
239
-62.65
-77.17
3
A
TYR
240
-52.77
-80.57
3
A
HIS
241
23.04
42.32
3
A
ARG
245
-133.14
-46.91
4
A
TYR
240
-85.14
-89.29
4
A
HIS
241
28.52
49.00
4
A
ARG
245
-144.37
-46.21
5
A
LYS
238
-38.77
-34.56
5
A
TYR
240
-86.45
-90.27
5
A
HIS
241
28.76
46.11
5
A
ARG
245
-155.34
-44.92
6
A
TYR
240
-78.69
-86.86
6
A
HIS
241
20.25
46.61
6
A
ARG
245
-145.51
-45.27
7
A
LYS
238
-82.21
-73.15
7
A
TYR
240
-80.58
-89.50
7
A
HIS
241
29.59
48.25
7
A
ARG
245
-154.54
-42.94
8
A
TYR
240
-86.38
-87.23
8
A
HIS
241
31.61
48.60
8
A
ARG
245
-151.43
-41.72
9
A
TYR
240
-76.12
-84.30
9
A
HIS
241
29.19
42.09
9
A
GLU
244
-99.77
33.59
9
A
ARG
245
-148.15
-43.53
10
A
TYR
240
-68.60
-85.88
10
A
HIS
241
21.04
52.28
10
A
ARG
245
-147.92
-44.98
NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
1
Y
N
A
LYS
248
A
LYS
14
HELX_P
A
LYS
252
A
LYS
18
5
1
5
A
LYS
261
A
LYS
27
HELX_P
A
VAL
267
A
VAL
33
1
2
7
covale
1.296
both
A
ACE
235
A
C
ACE
1
1_555
A
ASN
236
A
N
ASN
2
1_555
covale
1.324
both
A
GLU
268
A
C
GLU
34
1_555
A
NH2
269
A
N
NH2
35
1_555
NUCLEOTIDYLTRANSFERASE
TRANSFERASE, NUCLEOTIDYLTRANSFERASE, PHOSPHOLIPID BIOSYNTHESIS, MEMBRANE, PHOSPHORYLATION
PCY1A_RAT
UNP
1
1
P19836
MDAQSSAKVNSRKRRKEVPGPNGATEEDGIPSKVQRCAVGLRQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVY
ADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAE
HRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKY
HLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAISPKQSP
SSSPTHERSPSPSFRWPFSGKTSPSSSPASLSRCKAVTCDISEDEED
236
268
1PEH
236
268
P19836
A
1
2
34
1
PHE
engineered mutation
TRP
263
1PEH
A
P19836
UNP
263
29
BINDING SITE FOR RESIDUE ACE A 235
A
ACE
235
Software
1
BINDING SITE FOR RESIDUE NH2 A 269
A
NH2
269
Software
1
A
GLU
237
A
GLU
3
1
1_555
A
GLU
268
A
GLU
34
1
1_555
1
P 1