0.007829 0.000000 0.000000 0.000000 0.007829 0.000000 0.000000 0.000000 0.007829 0.00000 0.00000 0.00000 Zhang, R. Joachimiak, A. Edwards, A. Savchenko, A. Xu, L. Midwest Center for Structural Genomics (MCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 127.737 127.737 127.737 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking Hg 2 200.590 MERCURY (II) ION non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N HG N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 S C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N S N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N O N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 R C N 310 N O N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N N Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C N 360 N O N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing To be Published 0353 The 2.5A crystal structure of protein YJGH from E. Coli 10.2210/pdb1pf5/pdb pdb_00001pf5 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 Si 111 Channel CCD 2002-09-01 SBC-2 Si 111 Channel SINGLE WAVELENGTH M x-ray 1 0.9793 1.0 19-ID APS 0.9793 SYNCHROTRON APS BEAMLINE 19-ID 14603.198 Hypothetical protein yjgH 1 man polymer 200.590 MERCURY (II) ION 1 syn non-polymer 18.015 water 71 nat water no no MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSF HTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSF HTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ A APC5516 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample YJGH 562 Escherichia coli 562 Escherichia coli BL21 (DE3) star PLASMID pET15b 1 VAPOR DIFFUSION, HANGING DROP 6.0 0.2 M Lithium sulphate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 Midwest Center for Structural Genomics MCSG PSI, Protein Structure Initiative software chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Derived calculations Version format compliance Refinement description Data collection Database references Derived calculations 1 0 2003-12-09 1 1 2008-04-29 1 2 2011-07-13 1 3 2017-10-11 1 4 2024-02-14 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2003-05-23 REL REL HG MERCURY (II) ION HOH water HG 1 2 HG HG 132 A TIP 414 3 HOH HOH 414 A TIP 415 3 HOH HOH 415 A TIP 416 3 HOH HOH 416 A TIP 417 3 HOH HOH 417 A TIP 418 3 HOH HOH 418 A TIP 419 3 HOH HOH 419 A TIP 420 3 HOH HOH 420 A TIP 421 3 HOH HOH 421 A TIP 422 3 HOH HOH 422 A TIP 423 3 HOH HOH 423 A TIP 424 3 HOH HOH 424 A TIP 425 3 HOH HOH 425 A TIP 426 3 HOH HOH 426 A TIP 427 3 HOH HOH 427 A TIP 428 3 HOH HOH 428 A TIP 429 3 HOH HOH 429 A TIP 430 3 HOH HOH 430 A TIP 431 3 HOH HOH 431 A TIP 432 3 HOH HOH 432 A TIP 434 3 HOH HOH 434 A TIP 435 3 HOH HOH 435 A TIP 437 3 HOH HOH 437 A TIP 438 3 HOH HOH 438 A TIP 440 3 HOH HOH 440 A TIP 441 3 HOH HOH 441 A TIP 442 3 HOH HOH 442 A TIP 443 3 HOH HOH 443 A TIP 444 3 HOH HOH 444 A TIP 447 3 HOH HOH 447 A TIP 449 3 HOH HOH 449 A TIP 450 3 HOH HOH 450 A TIP 451 3 HOH HOH 451 A TIP 452 3 HOH HOH 452 A TIP 454 3 HOH HOH 454 A TIP 455 3 HOH HOH 455 A TIP 456 3 HOH HOH 456 A TIP 457 3 HOH HOH 457 A TIP 458 3 HOH HOH 458 A TIP 459 3 HOH HOH 459 A TIP 460 3 HOH HOH 460 A TIP 461 3 HOH HOH 461 A TIP 462 3 HOH HOH 462 A TIP 463 3 HOH HOH 463 A TIP 464 3 HOH HOH 464 A TIP 465 3 HOH HOH 465 A TIP 466 3 HOH HOH 466 A TIP 467 3 HOH HOH 467 A TIP 469 3 HOH HOH 469 A TIP 470 3 HOH HOH 470 A TIP 471 3 HOH HOH 471 A TIP 472 3 HOH HOH 472 A TIP 473 3 HOH HOH 473 A TIP 474 3 HOH HOH 474 A TIP 475 3 HOH HOH 475 A TIP 476 3 HOH HOH 476 A TIP 477 3 HOH HOH 477 A TIP 478 3 HOH HOH 478 A TIP 480 3 HOH HOH 480 A TIP 481 3 HOH HOH 481 A TIP 482 3 HOH HOH 482 A TIP 483 3 HOH HOH 483 A TIP 484 3 HOH HOH 484 A TIP 485 3 HOH HOH 485 A TIP 486 3 HOH HOH 486 A TIP 487 3 HOH HOH 487 A TIP 488 3 HOH HOH 488 A TIP 489 3 HOH HOH 489 A TIP 490 3 HOH HOH 490 A TIP 491 3 HOH HOH 491 A TIP 492 3 HOH HOH 492 A TIP 493 3 HOH HOH 493 A n 1 1 A VAL 2 n 2 VAL 2 A GLU 3 n 3 GLU 3 A ALA 4 n 4 ARG 4 A THR 5 n 5 THR 5 A ALA 6 n 6 ALA 6 A VAL 7 n 7 VAL 7 A PHE 8 n 8 PHE 8 A PRO 9 n 9 PRO 9 A ALA 10 n 10 ALA 10 A GLY 11 n 11 GLY 11 A ALA 12 n 12 ARG 12 A HIS 13 n 13 HIS 13 A SER 14 n 14 SER 14 A LEU 15 n 15 LEU 15 A TYR 16 n 16 TYR 16 A ALA 17 n 17 ALA 17 A GLU 18 n 18 GLU 18 A HIS 19 n 19 HIS 19 A ARG 20 n 20 ARG 20 A TYR 21 n 21 TYR 21 A SER 22 n 22 SER 22 A ALA 23 n 23 ALA 23 A ALA 24 n 24 ALA 24 A ILE 25 n 25 ILE 25 A ARG 26 n 26 ARG 26 A SER 27 n 27 SER 27 A GLY 28 n 28 GLY 28 A ASP 29 n 29 ASP 29 A LEU 30 n 30 LEU 30 A LEU 31 n 31 LEU 31 A PHE 32 n 32 PHE 32 A VAL 33 n 33 VAL 33 A SER 34 n 34 SER 34 A GLY 35 n 35 GLY 35 A GLN 36 n 36 GLN 36 A VAL 37 n 37 VAL 37 A GLY 38 n 38 GLY 38 A SER 39 n 39 SER 39 A ARG 40 n 40 ARG 40 A GLU 41 n 41 GLU 41 A ASP 42 n 42 ASP 42 A GLY 43 n 43 GLY 43 A THR 44 n 44 THR 44 A PRO 45 n 45 PRO 45 A GLU 46 n 46 GLU 46 A PRO 47 n 47 PRO 47 A ASP 48 n 48 ASP 48 A PHE 49 n 49 PHE 49 A GLN 50 n 50 GLN 50 A GLN 51 n 51 GLN 51 A GLN 52 n 52 GLN 52 A VAL 53 n 53 VAL 53 A ARG 54 n 54 ARG 54 A LEU 55 n 55 LEU 55 A ALA 56 n 56 ALA 56 A PHE 57 n 57 PHE 57 A ASP 58 n 58 ASP 58 A ASN 59 n 59 ASN 59 A LEU 60 n 60 LEU 60 A HIS 61 n 61 HIS 61 A ALA 62 n 62 ALA 62 A THR 63 n 63 THR 63 A LEU 64 n 64 LEU 64 A ALA 65 n 65 ALA 65 A ALA 66 n 66 ALA 66 A ALA 67 n 67 ALA 67 A GLY 68 n 68 GLY 68 A CYS 69 n 69 CYS 69 A THR 70 n 70 THR 70 A PHE 71 n 71 PHE 71 A ASP 72 n 72 ASP 72 A ASP 73 n 73 ASP 73 A ILE 74 n 74 ILE 74 A ILE 75 n 75 ILE 75 A ASP 76 n 76 ASP 76 A VAL 77 n 77 VAL 77 A THR 78 n 78 THR 78 A SER 79 n 79 SER 79 A PHE 80 n 80 PHE 80 A HIS 81 n 81 HIS 81 A THR 82 n 82 THR 82 A ASP 83 n 83 ASP 83 A PRO 84 n 84 PRO 84 A GLU 85 n 85 GLU 85 A ASN 86 n 86 ASN 86 A GLN 87 n 87 GLN 87 A PHE 88 n 88 PHE 88 A GLU 89 n 89 GLU 89 A ASP 90 n 90 ASP 90 A ILE 91 n 91 ILE 91 A MET 92 n 92 MET 92 A THR 93 n 93 THR 93 A VAL 94 n 94 VAL 94 A LYS 95 n 95 LYS 95 A ASN 96 n 96 ASN 96 A GLU 97 n 97 GLU 97 A ILE 98 n 98 ILE 98 A PHE 99 n 99 PHE 99 A SER 100 n 100 SER 100 A ALA 101 n 101 ALA 101 A PRO 102 n 102 PRO 102 A PRO 103 n 103 PRO 103 A TYR 104 n 104 TYR 104 A PRO 105 n 105 PRO 105 A ASN 106 n 106 ASN 106 A TRP 107 n 107 TRP 107 A THR 108 n 108 THR 108 A ALA 109 n 109 ALA 109 A VAL 110 n 110 VAL 110 A GLY 111 n 111 GLY 111 A VAL 112 n 112 VAL 112 A THR 113 n 113 THR 113 A TRP 114 n 114 TRP 114 A LEU 115 n 115 LEU 115 A ALA 116 n 116 ALA 116 A GLY 117 n 117 GLY 117 A PHE 118 n 118 PHE 118 A ASP 119 n 119 ASP 119 A PHE 120 n 120 PHE 120 A GLU 121 n 121 GLU 121 A ILE 122 n 122 ILE 122 A LYS 123 n 123 LYS 123 A VAL 124 n 124 VAL 124 A ILE 125 n 125 ILE 125 A ALA 126 n 126 ALA 126 A ARG 127 n 127 ARG 127 A ILE 128 n 128 ILE 128 A PRO 129 n 129 PRO 129 A GLU 130 n 130 GLU 130 A GLN 131 n 131 GLN 131 A author_and_software_defined_assembly PISA,PQS 3 trimeric 6710 -107 15630 A CYS 69 A SG CYS 69 1_555 A HG 132 B HG HG 1_555 A ASP 73 A OD2 ASP 73 1_555 99.6 A CYS 69 A SG CYS 69 1_555 A HG 132 B HG HG 1_555 A ARG 127 A O ARG 127 1_555 96.5 A ASP 73 A OD2 ASP 73 1_555 A HG 132 B HG HG 1_555 A ARG 127 A O ARG 127 1_555 100.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5_456 z-1,x,y+1 crystal symmetry operation -127.7370000000 0.0000000000 127.7370000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 9_546 y,z-1,x+1 crystal symmetry operation 0.0000000000 -127.7370000000 127.7370000000 A N VAL 7 A N VAL 7 A O ALA 24 A O ALA 24 A N SER 27 A N SER 27 A O LEU 30 A O LEU 30 A N LEU 31 A N LEU 31 A O ALA 126 A O ALA 126 A O LYS 123 A O LYS 123 A N THR 78 A N THR 78 A N SER 79 A N SER 79 A O THR 108 A O THR 108 1 A CG ARG 4 A CG ARG 4 1 Y 1 A CD ARG 4 A CD ARG 4 1 Y 1 A NE ARG 4 A NE ARG 4 1 Y 1 A CZ ARG 4 A CZ ARG 4 1 Y 1 A NH1 ARG 4 A NH1 ARG 4 1 Y 1 A NH2 ARG 4 A NH2 ARG 4 1 Y 1 A CG ARG 12 A CG ARG 12 1 Y 1 A CD ARG 12 A CD ARG 12 1 Y 1 A NE ARG 12 A NE ARG 12 1 Y 1 A CZ ARG 12 A CZ ARG 12 1 Y 1 A NH1 ARG 12 A NH1 ARG 12 1 Y 1 A NH2 ARG 12 A NH2 ARG 12 1 Y 1 A MET 1 A MET 1 1 Y 1 A ARG 4 -56.42 82.78 1 A LEU 15 -147.44 -33.20 1 A ARG 20 55.06 73.83 1 A ASP 83 -160.85 63.00 1 A PHE 99 -107.10 78.47 1 A TRP 107 -172.87 140.16 1 A LEU 115 -147.33 46.03 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM ION.PARAM 46.7 0.00 0.00 0.00 0.00 0.00 0.00 Freidel pairs were used in refinement. 0.218 0.007 0.196 0.196 2.50 45.16 1045 23348 21480 4.9 92.0 RANDOM 1 RESTRAINED THROUGHOUT 0.0 0 SAD Engh & Huber FLAT MODEL 50.2691 0.339192 0.34 0.50 2.50 45.16 71 1084 1 0 1012 0.007 1.3 24.5 0.84 2.15 1.50 3.84 2.00 2.72 2.00 4.44 2.50 0.373 0.030 0.343 2.66 159 2984 6 5.1 80.4 13 2.5 50 1PF5 12174 11955 2.0 2.0 0.092 1 22.04 8.31 98.2 0.872 2.5 2.59 1.68 1197 1 5.0 99.5 refinement CNS 0.9 data reduction d*TREK data scaling HKL-2000 phasing CNS Structural Genomics, Protein YJGH 1 N N 2 N N 3 N N This protein exists as trimer which related by the crystallographic 3-fold axis. The trimer form the beta barrel A ASP 48 A ASP 48 HELX_P A ALA 66 A ALA 66 1 1 19 A THR 70 A THR 70 HELX_P A ASP 72 A ASP 72 5 2 3 A ASP 83 A ASP 83 HELX_P A ASN 86 A ASN 86 5 3 4 A GLN 87 A GLN 87 HELX_P A PHE 99 A PHE 99 1 4 13 metalc 2.733 A CYS 69 A SG CYS 69 1_555 A HG 132 B HG HG 1_555 metalc 3.388 A ASP 73 A OD2 ASP 73 1_555 A HG 132 B HG HG 1_555 metalc 3.285 A ARG 127 A O ARG 127 1_555 A HG 132 B HG HG 1_555 STRUCTURAL GENOMICS, UNKNOWN FUNCTION STRUCTURAL GENOMICS, BETA BARREL, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION A PRO 102 A PRO 102 1 A PRO 103 A PRO 103 0.14 YJGH_ECOLI UNP 1 1 P39332 MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSF HTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ 1 131 1PF5 1 131 P39332 A 1 1 131 6 anti-parallel anti-parallel anti-parallel anti-parallel parallel A THR 5 A THR 5 A VAL 7 A VAL 7 A ALA 24 A ALA 24 A SER 27 A SER 27 A LEU 30 A LEU 30 A GLN 36 A GLN 36 A PHE 120 A PHE 120 A ARG 127 A ARG 127 A ILE 74 A ILE 74 A HIS 81 A HIS 81 A THR 108 A THR 108 A GLY 111 A GLY 111 BINDING SITE FOR RESIDUE HG A 132 A HG 132 Software 3 A CYS 69 A CYS 69 3 1_555 A ASP 73 A ASP 73 3 1_555 A ARG 127 A ARG 127 3 1_555 199 I 21 3