1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Liu, D.J. Day, L.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N O N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N O N 58 N P N 59 N O N 60 N O N 61 N O N 62 N C N 63 R C N 64 N O N 65 S C N 66 N O N 67 N C N 68 R C N 69 N N N 70 N C N 71 N O N 72 N N N 73 N C N 74 N N N 75 N C N 76 N C N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N C N 98 N O N 99 N N N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 N C N 132 N C N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 S C N 145 N C N 146 N C N 147 N C N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 N C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N N N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N N N 210 S C N 211 N C N 212 N O N 213 N C N 214 N C N 215 N S N 216 N C N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C N 234 N O N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 R C N 248 N O N 249 N C N 250 N O N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C Y 269 N C Y 270 N C N 271 N O N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C N 289 N C N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing Y 260 N doub Y 261 N sing Y 262 N sing N 263 N sing Y 264 N doub N 265 N sing Y 266 N doub N 267 N sing Y 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing US Science SCIEAS 0038 0036-8075 265 671 674 8036516 Pf1 virus structure: helical coat protein and DNA with paraxial phosphates. 1994 10.2210/pdb1pfi/pdb pdb_00001pfi 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 1 1.0 4612.393 MAJOR COAT PROTEIN OF PF1 VIRUS 2 man polymer 307.197 DNA (5'-D(P*C)-3') 2 man polymer no no GVIDTSAVESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLRKA GVIDTSAVESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLRKA A,B polypeptide(L) no no (DC) C C,D polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Inovirus G8P sample 10871 Pseudomonas phage Pf1 Inovirus G8P sample 10871 Pseudomonas phage Pf1 chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_struct_oper_list struct_site repository Initial release Version format compliance Version format compliance Other Data collection Database references Derived calculations Other 1 0 1995-01-26 1 1 2008-03-21 1 2 2011-07-13 1 3 2013-03-27 1 4 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.type _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1994-04-06 REL 1 no 1 35 6.100000 131.840000 GLY 1 n 1 GLY 1 A VAL 2 n 2 VAL 2 A ILE 3 n 3 ILE 3 A ASP 4 n 4 ASP 4 A THR 5 n 5 THR 5 A SER 6 n 6 SER 6 A ALA 7 n 7 ALA 7 A VAL 8 n 8 VAL 8 A GLU 9 n 9 GLU 9 A SER 10 n 10 SER 10 A ALA 11 n 11 ALA 11 A ILE 12 n 12 ILE 12 A THR 13 n 13 THR 13 A ASP 14 n 14 ASP 14 A GLY 15 n 15 GLY 15 A GLN 16 n 16 GLN 16 A GLY 17 n 17 GLY 17 A ASP 18 n 18 ASP 18 A MET 19 n 19 MET 19 A LYS 20 n 20 LYS 20 A ALA 21 n 21 ALA 21 A ILE 22 n 22 ILE 22 A GLY 23 n 23 GLY 23 A GLY 24 n 24 GLY 24 A TYR 25 n 25 TYR 25 A ILE 26 n 26 ILE 26 A VAL 27 n 27 VAL 27 A GLY 28 n 28 GLY 28 A ALA 29 n 29 ALA 29 A LEU 30 n 30 LEU 30 A VAL 31 n 31 VAL 31 A ILE 32 n 32 ILE 32 A LEU 33 n 33 LEU 33 A ALA 34 n 34 ALA 34 A VAL 35 n 35 VAL 35 A ALA 36 n 36 ALA 36 A GLY 37 n 37 GLY 37 A LEU 38 n 38 LEU 38 A ILE 39 n 39 ILE 39 A TYR 40 n 40 TYR 40 A SER 41 n 41 SER 41 A MET 42 n 42 MET 42 A LEU 43 n 43 LEU 43 A ARG 44 n 44 ARG 44 A LYS 45 n 45 LYS 45 A ALA 46 n 46 ALA 46 A GLY 1 n 1 GLY 1 B VAL 2 n 2 VAL 2 B ILE 3 n 3 ILE 3 B ASP 4 n 4 ASP 4 B THR 5 n 5 THR 5 B SER 6 n 6 SER 6 B ALA 7 n 7 ALA 7 B VAL 8 n 8 VAL 8 B GLU 9 n 9 GLU 9 B SER 10 n 10 SER 10 B ALA 11 n 11 ALA 11 B ILE 12 n 12 ILE 12 B THR 13 n 13 THR 13 B ASP 14 n 14 ASP 14 B GLY 15 n 15 GLY 15 B GLN 16 n 16 GLN 16 B GLY 17 n 17 GLY 17 B ASP 18 n 18 ASP 18 B MET 19 n 19 MET 19 B LYS 20 n 20 LYS 20 B ALA 21 n 21 ALA 21 B ILE 22 n 22 ILE 22 B GLY 23 n 23 GLY 23 B GLY 24 n 24 GLY 24 B TYR 25 n 25 TYR 25 B ILE 26 n 26 ILE 26 B VAL 27 n 27 VAL 27 B GLY 28 n 28 GLY 28 B ALA 29 n 29 ALA 29 B LEU 30 n 30 LEU 30 B VAL 31 n 31 VAL 31 B ILE 32 n 32 ILE 32 B LEU 33 n 33 LEU 33 B ALA 34 n 34 ALA 34 B VAL 35 n 35 VAL 35 B ALA 36 n 36 ALA 36 B GLY 37 n 37 GLY 37 B LEU 38 n 38 LEU 38 B ILE 39 n 39 ILE 39 B TYR 40 n 40 TYR 40 B SER 41 n 41 SER 41 B MET 42 n 42 MET 42 B LEU 43 n 43 LEU 43 B ARG 44 n 44 ARG 44 B LYS 45 n 45 LYS 45 B ALA 46 n 46 ALA 46 B DC 1 n 1 DC 1 C DC 1 n 1 DC 1 D representative helical assembly 140 helical helical asymmetric unit 4 tetrameric helical asymmetric unit, std helical frame 4 tetrameric 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 0.00000 0.15160586 0.98844103 0.00000000 -0.98844103 0.15160586 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -103.70000 0.63526983 -0.77229026 0.00000000 0.77229026 0.63526983 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -97.60000 -0.99912283 0.04187565 0.00000000 -0.04187565 -0.99912283 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -91.50000 0.69766543 0.71642372 0.00000000 -0.71642372 0.69766543 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -85.40000 0.06836354 -0.99766048 0.00000000 0.99766048 0.06836354 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -79.30000 -0.78886961 0.61456060 0.00000000 -0.61456060 -0.78886961 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -73.20000 0.98407174 0.17777180 0.00000000 -0.17777180 0.98407174 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -67.10000 -0.52398591 -0.85172693 0.00000000 0.85172693 -0.52398591 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -61.00000 -0.28501926 0.95852179 0.00000000 -0.95852179 -0.28501926 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -54.90000 0.90423167 -0.42704225 0.00000000 0.42704225 0.90423167 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -48.80000 -0.92132118 -0.38880237 0.00000000 0.38880237 -0.92132118 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -42.70000 0.32490798 0.94574563 0.00000000 -0.94574563 0.32490798 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -36.60000 0.48785966 -0.87292208 0.00000000 0.87292208 0.48785966 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -30.50000 -0.97576423 0.21882451 0.00000000 -0.21882451 -0.97576423 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -24.40000 0.81391277 0.58098710 0.00000000 -0.58098710 0.81391277 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -18.30000 -0.11008126 -0.99392259 0.00000000 0.99392259 -0.11008126 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -12.20000 -0.66705275 0.74501049 0.00000000 -0.74501049 -0.66705275 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 -6.10000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 0.00000 -0.66705275 -0.74501049 0.00000000 0.74501049 -0.66705275 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 6.10000 -0.11008126 0.99392259 0.00000000 -0.99392259 -0.11008126 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 12.20000 0.81391277 -0.58098710 0.00000000 0.58098710 0.81391277 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 18.30000 -0.97576423 -0.21882451 0.00000000 0.21882451 -0.97576423 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 24.40000 0.48785966 0.87292208 0.00000000 -0.87292208 0.48785966 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 30.50000 0.32490798 -0.94574563 0.00000000 0.94574563 0.32490798 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 36.60000 -0.92132118 0.38880237 0.00000000 -0.38880237 -0.92132118 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 42.70000 0.90423167 0.42704225 0.00000000 -0.42704225 0.90423167 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 48.80000 -0.28501926 -0.95852179 0.00000000 0.95852179 -0.28501926 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 54.90000 -0.52398591 0.85172693 0.00000000 -0.85172693 -0.52398591 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 61.00000 0.98407174 -0.17777180 0.00000000 0.17777180 0.98407174 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 67.10000 -0.78886961 -0.61456060 0.00000000 0.61456060 -0.78886961 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 73.20000 0.06836354 0.99766048 0.00000000 -0.99766048 0.06836354 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 79.30000 0.69766543 -0.71642372 0.00000000 0.71642372 0.69766543 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 85.40000 -0.99912283 -0.04187565 0.00000000 0.04187565 -0.99912283 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 91.50000 0.63526983 0.77229026 0.00000000 -0.77229026 0.63526983 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 97.60000 0.15160586 -0.98844103 0.00000000 0.98844103 0.15160586 0.00000000 0.00000000 0.00000000 1.00000000 helical symmetry operation 0.00000 0.00000 103.70000 1 B C HG2 H5 LYS DC 45 1 0.43 1 A A HD11 N ILE GLY 22 23 1.22 1 B B HD11 N ILE GLY 22 23 1.22 1 B B O HG21 ASP ILE 18 22 1.25 1 A A O HG21 ASP ILE 18 22 1.25 1 B B HA2 HG1 GLY THR 1 5 1.25 1 A A HA2 HG1 GLY THR 1 5 1.25 1 B C CG H5 LYS DC 45 1 1.32 1 B C HE2 H6 LYS DC 45 1 1.32 1 B C HB2 H41 LYS DC 45 1 1.34 1 A A O HG23 GLY THR 1 5 1.36 1 B B O HG23 GLY THR 1 5 1.36 1 B B O HG13 ASP VAL 4 8 1.41 1 A A O HG13 ASP VAL 4 8 1.41 1 B B O HD2 GLY ASP 15 18 1.42 1 A A O HD2 GLY ASP 15 18 1.42 1 B C HG2 C5 LYS DC 45 1 1.45 1 A A O HG22 VAL ILE 8 12 1.49 1 B B O HG22 VAL ILE 8 12 1.49 1 B B O CG2 GLY THR 1 5 1.94 1 A A O CG2 GLY THR 1 5 1.94 1 B B O OD2 GLY ASP 15 18 2.08 1 A A O OD2 GLY ASP 15 18 2.08 1 A A O CG2 ASP ILE 18 22 2.15 1 B B O CG2 ASP ILE 18 22 2.15 1 B C CG C5 LYS DC 45 1 2.16 1 A A O OD1 GLY ASP 15 18 2.18 1 B B O OD1 GLY ASP 15 18 2.18 1 -5.53 0.90 118.30 112.77 A A A CB CG OD2 ASP ASP ASP 4 4 4 N 1 -5.61 0.90 118.30 112.69 A A A CB CG OD2 ASP ASP ASP 14 14 14 N 1 -5.48 0.90 118.30 112.82 A A A CB CG OD2 ASP ASP ASP 18 18 18 N 1 4.09 0.50 120.30 124.39 A A A NE CZ NH1 ARG ARG ARG 44 44 44 N 1 -5.54 0.90 118.30 112.76 B B B CB CG OD2 ASP ASP ASP 4 4 4 N 1 -5.57 0.90 118.30 112.73 B B B CB CG OD2 ASP ASP ASP 14 14 14 N 1 -5.48 0.90 118.30 112.82 B B B CB CG OD2 ASP ASP ASP 18 18 18 N 1 4.12 0.50 120.30 124.42 B B B NE CZ NH1 ARG ARG ARG 44 44 44 N 1 -14.33 1.50 119.60 105.27 C C C OP1 P OP2 DC DC DC 1 1 1 N 1 2.79 0.30 108.30 111.09 C C C O4' C1' N1 DC DC DC 1 1 1 N 1 -3.51 0.40 120.30 116.79 C C C C6 N1 C2 DC DC DC 1 1 1 N 1 3.73 0.50 117.40 121.13 C C C C4 C5 C6 DC DC DC 1 1 1 N 1 5.29 0.60 118.90 124.19 C C C N1 C2 O2 DC DC DC 1 1 1 N 1 -4.41 0.70 121.90 117.49 C C C N3 C2 O2 DC DC DC 1 1 1 N 1 -14.33 1.50 119.60 105.27 D D D OP1 P OP2 DC DC DC 1 1 1 N 1 2.79 0.30 108.30 111.09 D D D O4' C1' N1 DC DC DC 1 1 1 N 1 -3.51 0.40 120.30 116.79 D D D C6 N1 C2 DC DC DC 1 1 1 N 1 3.73 0.50 117.40 121.13 D D D C4 C5 C6 DC DC DC 1 1 1 N 1 5.29 0.60 118.90 124.19 D D D N1 C2 O2 DC DC DC 1 1 1 N 1 -4.41 0.70 121.90 117.49 D D D N3 C2 O2 DC DC DC 1 1 1 N 1 A A C N GLY VAL 1 2 0.144 0.023 1.336 1.480 Y 1 A A C N VAL ILE 2 3 0.142 0.023 1.336 1.478 Y 1 A A C N ILE ASP 3 4 0.143 0.023 1.336 1.479 Y 1 A A C N ASP THR 4 5 0.146 0.023 1.336 1.482 Y 1 A A C N THR SER 5 6 0.143 0.023 1.336 1.479 Y 1 A A C N SER ALA 6 7 0.141 0.023 1.336 1.477 Y 1 A A C N ALA VAL 7 8 0.140 0.023 1.336 1.476 Y 1 A A C N VAL GLU 8 9 0.140 0.023 1.336 1.476 Y 1 A A CD OE2 GLU GLU 9 9 0.110 0.011 1.252 1.362 N 1 A A C N GLU SER 9 10 0.142 0.023 1.336 1.478 Y 1 A A C N SER ALA 10 11 0.145 0.023 1.336 1.481 Y 1 A A C N ALA ILE 11 12 0.145 0.023 1.336 1.481 Y 1 A A C N ILE THR 12 13 0.141 0.023 1.336 1.477 Y 1 A A C N THR ASP 13 14 0.143 0.023 1.336 1.479 Y 1 A A C N ASP GLY 14 15 0.143 0.023 1.336 1.479 Y 1 A A C N GLY GLN 15 16 0.142 0.023 1.336 1.478 Y 1 A A C N GLN GLY 16 17 0.141 0.023 1.336 1.477 Y 1 A A C N GLY ASP 17 18 0.142 0.023 1.336 1.478 Y 1 A A C N ASP MET 18 19 0.141 0.023 1.336 1.477 Y 1 A A C N MET LYS 19 20 0.142 0.023 1.336 1.478 Y 1 A A C N LYS ALA 20 21 0.142 0.023 1.336 1.478 Y 1 A A C N ALA ILE 21 22 0.143 0.023 1.336 1.479 Y 1 A A C N ILE GLY 22 23 0.141 0.023 1.336 1.477 Y 1 A A C N GLY GLY 23 24 0.142 0.023 1.336 1.478 Y 1 A A C N GLY TYR 24 25 0.141 0.023 1.336 1.477 Y 1 A A C N TYR ILE 25 26 0.142 0.023 1.336 1.478 Y 1 A A C N ILE VAL 26 27 0.144 0.023 1.336 1.480 Y 1 A A C N VAL GLY 27 28 0.141 0.023 1.336 1.477 Y 1 A A C N GLY ALA 28 29 0.144 0.023 1.336 1.480 Y 1 A A C N ALA LEU 29 30 0.143 0.023 1.336 1.479 Y 1 A A C N LEU VAL 30 31 0.143 0.023 1.336 1.479 Y 1 A A C N VAL ILE 31 32 0.143 0.023 1.336 1.479 Y 1 A A C N ILE LEU 32 33 0.146 0.023 1.336 1.482 Y 1 A A C N LEU ALA 33 34 0.144 0.023 1.336 1.480 Y 1 A A C N ALA VAL 34 35 0.142 0.023 1.336 1.478 Y 1 A A C N VAL ALA 35 36 0.142 0.023 1.336 1.478 Y 1 A A C N ALA GLY 36 37 0.144 0.023 1.336 1.480 Y 1 A A C N GLY LEU 37 38 0.143 0.023 1.336 1.479 Y 1 A A C N LEU ILE 38 39 0.143 0.023 1.336 1.479 Y 1 A A C N ILE TYR 39 40 0.143 0.023 1.336 1.479 Y 1 A A C N TYR SER 40 41 0.144 0.023 1.336 1.480 Y 1 A A C N SER MET 41 42 0.144 0.023 1.336 1.480 Y 1 A A C N MET LEU 42 43 0.141 0.023 1.336 1.477 Y 1 A A C N LEU ARG 43 44 0.142 0.023 1.336 1.478 Y 1 A A C N ARG LYS 44 45 0.142 0.023 1.336 1.478 Y 1 A A C N LYS ALA 45 46 0.141 0.023 1.336 1.477 Y 1 A A C OXT ALA ALA 46 46 0.200 0.019 1.229 1.429 N 1 B B C N GLY VAL 1 2 0.144 0.023 1.336 1.480 Y 1 B B C N VAL ILE 2 3 0.142 0.023 1.336 1.478 Y 1 B B C N ILE ASP 3 4 0.144 0.023 1.336 1.480 Y 1 B B C N ASP THR 4 5 0.146 0.023 1.336 1.482 Y 1 B B C N THR SER 5 6 0.143 0.023 1.336 1.479 Y 1 B B C N SER ALA 6 7 0.142 0.023 1.336 1.478 Y 1 B B C N ALA VAL 7 8 0.140 0.023 1.336 1.476 Y 1 B B C N VAL GLU 8 9 0.140 0.023 1.336 1.476 Y 1 B B CD OE2 GLU GLU 9 9 0.111 0.011 1.252 1.363 N 1 B B C N GLU SER 9 10 0.142 0.023 1.336 1.478 Y 1 B B C N SER ALA 10 11 0.144 0.023 1.336 1.480 Y 1 B B C N ALA ILE 11 12 0.145 0.023 1.336 1.481 Y 1 B B C N ILE THR 12 13 0.140 0.023 1.336 1.476 Y 1 B B C N THR ASP 13 14 0.143 0.023 1.336 1.479 Y 1 B B C N ASP GLY 14 15 0.144 0.023 1.336 1.480 Y 1 B B C N GLY GLN 15 16 0.142 0.023 1.336 1.478 Y 1 B B C N GLN GLY 16 17 0.141 0.023 1.336 1.477 Y 1 B B C N GLY ASP 17 18 0.142 0.023 1.336 1.478 Y 1 B B C N ASP MET 18 19 0.141 0.023 1.336 1.477 Y 1 B B C N MET LYS 19 20 0.142 0.023 1.336 1.478 Y 1 B B C N LYS ALA 20 21 0.142 0.023 1.336 1.478 Y 1 B B C N ALA ILE 21 22 0.143 0.023 1.336 1.479 Y 1 B B C N ILE GLY 22 23 0.141 0.023 1.336 1.477 Y 1 B B C N GLY GLY 23 24 0.142 0.023 1.336 1.478 Y 1 B B C N GLY TYR 24 25 0.141 0.023 1.336 1.477 Y 1 B B C N TYR ILE 25 26 0.142 0.023 1.336 1.478 Y 1 B B C N ILE VAL 26 27 0.144 0.023 1.336 1.480 Y 1 B B C N VAL GLY 27 28 0.141 0.023 1.336 1.477 Y 1 B B C N GLY ALA 28 29 0.145 0.023 1.336 1.481 Y 1 B B C N ALA LEU 29 30 0.142 0.023 1.336 1.478 Y 1 B B C N LEU VAL 30 31 0.143 0.023 1.336 1.479 Y 1 B B C N VAL ILE 31 32 0.142 0.023 1.336 1.478 Y 1 B B C N ILE LEU 32 33 0.146 0.023 1.336 1.482 Y 1 B B C N LEU ALA 33 34 0.144 0.023 1.336 1.480 Y 1 B B C N ALA VAL 34 35 0.142 0.023 1.336 1.478 Y 1 B B C N VAL ALA 35 36 0.143 0.023 1.336 1.479 Y 1 B B C N ALA GLY 36 37 0.144 0.023 1.336 1.480 Y 1 B B C N GLY LEU 37 38 0.143 0.023 1.336 1.479 Y 1 B B C N LEU ILE 38 39 0.143 0.023 1.336 1.479 Y 1 B B C N ILE TYR 39 40 0.143 0.023 1.336 1.479 Y 1 B B C N TYR SER 40 41 0.143 0.023 1.336 1.479 Y 1 B B C N SER MET 41 42 0.143 0.023 1.336 1.479 Y 1 B B C N MET LEU 42 43 0.141 0.023 1.336 1.477 Y 1 B B C N LEU ARG 43 44 0.142 0.023 1.336 1.478 Y 1 B B C N ARG LYS 44 45 0.143 0.023 1.336 1.479 Y 1 B B C N LYS ALA 45 46 0.141 0.023 1.336 1.477 Y 1 B B C OXT ALA ALA 46 46 0.200 0.019 1.229 1.429 N 1 C C C5' C4' DC DC 1 1 0.052 0.007 1.512 1.564 N 1 C C C4 N4 DC DC 1 1 0.118 0.009 1.335 1.453 N 1 C C N1 C6 DC DC 1 1 0.154 0.006 1.367 1.521 N 1 C C C2 N3 DC DC 1 1 0.157 0.008 1.353 1.510 N 1 C C N3 C4 DC DC 1 1 -0.044 0.007 1.335 1.291 N 1 C C C4 C5 DC DC 1 1 -0.058 0.008 1.425 1.367 N 1 D D C5' C4' DC DC 1 1 0.052 0.007 1.512 1.564 N 1 D D C4 N4 DC DC 1 1 0.118 0.009 1.335 1.453 N 1 D D N1 C6 DC DC 1 1 0.154 0.006 1.367 1.521 N 1 D D C2 N3 DC DC 1 1 0.157 0.008 1.353 1.510 N 1 D D N3 C4 DC DC 1 1 -0.044 0.007 1.335 1.291 N 1 D D C4 C5 DC DC 1 1 -0.058 0.008 1.425 1.367 N 1 A ILE 3 -65.09 -91.00 1 B ILE 3 -65.06 -91.01 DATA ARE BASED ON, BUT NOT LIMITED TO, FIBER DIFFRACTION. 3.0 1 3.0 0 682 0 38 644 PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES 1 N N 1 N N 2 N N 2 N N A VAL 2 A VAL 2 HELX_P A GLN 16 A GLN 16 1 1 15 A GLN 16 A GLN 16 HELX_P A ALA 46 A ALA 46 1 2 31 B VAL 2 B VAL 2 HELX_P B GLN 16 B GLN 16 1 3 15 B GLN 16 B GLN 16 HELX_P B ALA 46 B ALA 46 1 4 31 VIRUS COMPLEX(VIRAL COAT PROTEIN-DNA), Helical virus, Virus COATB_BPPF1 UNP 1 1 P03621 MKAMKQRIAKFSPVASFRNLCIAGSVTAATSLPAFAGVIDTSAVESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLR KA 1PFI PDB 2 1 1PFI C 37 82 1PFI 1 46 P03621 A 1 1 46 37 82 1PFI 1 46 P03621 B 1 1 46 1 1 1PFI 1 1 1PFI C 2 1 1 1 1 1PFI 1 1 1PFI D 2 1 1 BINDING SITE FOR RESIDUE DC C 1 C DC 1 Software 4 BINDING SITE FOR RESIDUE DC D 1 D DC 1 Software 2 A ARG 44 A ARG 44 4 1_555 B SER 41 B SER 41 4 1_555 B MET 42 B MET 42 4 1_555 B LYS 45 B LYS 45 4 1_555 A LYS 45 A LYS 45 2 1_555 B LYS 45 B LYS 45 2 1_555 1 P 1