0.008190 0.004729 0.000000 0.000000 0.009457 0.000000 0.000000 0.000000 0.005435 0.00000 0.00000 0.00000 Baker, P.J. Sawa, Y. Shibata, H. Sedelnikova, S.E. Rice, D.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 122.100 122.100 184.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C21 H27 N7 O14 P2 663.425 NICOTINAMIDE-ADENINE-DINUCLEOTIDE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 S P N 251 N O N 252 N O N 253 N O N 254 N C N 255 R C N 256 N O N 257 S C N 258 N O N 259 R C N 260 N O N 261 R C Y 262 N N Y 263 N C Y 264 N N Y 265 N C Y 266 N C N 267 N N Y 268 N N Y 269 N C Y 270 N N Y 271 N C N 272 N O N 273 N P N 274 N O N 275 N O N 276 N O N 277 N C N 278 R C N 279 N O N 280 S C N 281 N O N 282 R C N 283 N O N 284 R C Y 285 N N Y 286 N C Y 287 N C N 288 N C N 289 N O N 290 N N Y 291 N C Y 292 N C Y 293 N C N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 N C N 349 N C N 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N O N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 R C N 380 N O N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N N Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C Y 424 N C Y 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C N 430 N O N 431 N O N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N N N 444 S C N 445 N C N 446 N O N 447 N C N 448 N C N 449 N C N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing Y 260 N sing Y 261 N sing Y 262 N doub N 263 N sing Y 264 N sing Y 265 N sing Y 266 N doub N 267 N sing Y 268 N doub N 269 N sing N 270 N sing Y 271 N sing Y 272 N doub N 273 N sing Y 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing Y 297 N sing Y 298 N doub Y 299 N doub N 300 N sing N 301 N sing Y 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing Y 323 N doub Y 324 N sing Y 325 N sing N 326 N sing Y 327 N doub N 328 N sing Y 329 N doub N 330 N sing Y 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing Y 392 N doub Y 393 N sing Y 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing Y 420 N doub Y 421 N sing Y 422 N sing N 423 N sing Y 424 N doub N 425 N sing Y 426 N doub N 427 N sing Y 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N doub N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 5 561 567 10.1038/817 9665169 Analysis of the structure and substrate binding of Phormidium lapideum alanine dehydrogenase. 1998 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 54 407 10.1107/S0907444997011578 Crystallization of the Alanine Dehydrogenase from Phormidium Lapideum 1998 JA J.Biochem.(Tokyo) JOBIAO 0418 0021-924X 116 995 Purification and Characterization of Alanine Dehydrogenase from a Cyanobacterium, Phormidium Lapideum 1994 10.2210/pdb1pjc/pdb pdb_00001pjc 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293.0 1 MIRRORS IMAGE PLATE 1997-02-19 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.92 1.0 PX9.5 SRS 0.92 SYNCHROTRON SRS BEAMLINE PX9.5 38592.262 PROTEIN (L-ALANINE DEHYDROGENASE) 1.4.1.1 1 man polymer 663.425 NICOTINAMIDE-ADENINE-DINUCLEOTIDE 1 syn non-polymer 18.015 water 95 nat water no no MEIGVPKEIKNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVKVKEPLPAE YDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLERQQGGRGVLLG GVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV PGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYV VKLANQGLKALETDDALAKGLNVQAHRLVHPAVQQVFPDLA MEIGVPKEIKNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVKVKEPLPAE YDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLERQQGGRGVLLG GVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLV PGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYV VKLANQGLKALETDDALAKGLNVQAHRLVHPAVQQVFPDLA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Phormidium Escherichia sample MATSUE HOT SPRINGS 32060 Phormidium lapideum ALADH 562 Escherichia coli MV1184 PUC18 PNAD1 1 3.42 64.01 6.70 PROTEIN CRYSTALLISED FROM 0.1M MES PH 6.7 6-10% PEG 20000, SOAKED IN 10MM NAD, pH 6.70 software chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Derived calculations Version format compliance Refinement description Data collection Database references Derived calculations 1 0 1999-07-15 1 1 2008-04-26 1 2 2011-07-13 1 3 2017-10-04 1 4 2023-12-27 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y RCSB 1998-06-05 REL NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HOH water NAD 500 2 NAD NAD 500 A WAT 1 3 HOH HOH 501 A WAT 2 3 HOH HOH 502 A WAT 3 3 HOH HOH 503 A WAT 4 3 HOH HOH 504 A WAT 5 3 HOH HOH 505 A WAT 6 3 HOH HOH 506 A WAT 7 3 HOH HOH 507 A WAT 8 3 HOH HOH 508 A WAT 9 3 HOH HOH 509 A WAT 10 3 HOH HOH 510 A WAT 11 3 HOH HOH 511 A WAT 12 3 HOH HOH 512 A WAT 13 3 HOH HOH 513 A WAT 14 3 HOH HOH 514 A WAT 15 3 HOH HOH 515 A WAT 16 3 HOH HOH 516 A WAT 17 3 HOH HOH 517 A WAT 18 3 HOH HOH 518 A WAT 19 3 HOH HOH 519 A WAT 20 3 HOH HOH 520 A WAT 21 3 HOH HOH 521 A WAT 22 3 HOH HOH 522 A WAT 23 3 HOH HOH 523 A WAT 24 3 HOH HOH 524 A WAT 25 3 HOH HOH 525 A WAT 26 3 HOH HOH 526 A WAT 27 3 HOH HOH 527 A WAT 28 3 HOH HOH 528 A WAT 29 3 HOH HOH 529 A WAT 30 3 HOH HOH 530 A WAT 31 3 HOH HOH 531 A WAT 32 3 HOH HOH 532 A WAT 33 3 HOH HOH 533 A WAT 34 3 HOH HOH 534 A WAT 35 3 HOH HOH 535 A WAT 36 3 HOH HOH 536 A WAT 37 3 HOH HOH 537 A WAT 38 3 HOH HOH 538 A WAT 39 3 HOH HOH 539 A WAT 40 3 HOH HOH 540 A WAT 41 3 HOH HOH 541 A WAT 42 3 HOH HOH 542 A WAT 43 3 HOH HOH 543 A WAT 44 3 HOH HOH 544 A WAT 45 3 HOH HOH 545 A WAT 46 3 HOH HOH 546 A WAT 47 3 HOH HOH 547 A WAT 48 3 HOH HOH 548 A WAT 49 3 HOH HOH 549 A WAT 50 3 HOH HOH 550 A WAT 51 3 HOH HOH 551 A WAT 52 3 HOH HOH 552 A WAT 53 3 HOH HOH 553 A WAT 54 3 HOH HOH 554 A WAT 55 3 HOH HOH 555 A WAT 56 3 HOH HOH 556 A WAT 57 3 HOH HOH 557 A WAT 58 3 HOH HOH 558 A WAT 59 3 HOH HOH 559 A WAT 60 3 HOH HOH 560 A WAT 61 3 HOH HOH 561 A WAT 62 3 HOH HOH 562 A WAT 63 3 HOH HOH 563 A WAT 64 3 HOH HOH 564 A WAT 65 3 HOH HOH 565 A WAT 66 3 HOH HOH 566 A WAT 67 3 HOH HOH 567 A WAT 68 3 HOH HOH 568 A WAT 69 3 HOH HOH 569 A WAT 70 3 HOH HOH 570 A WAT 71 3 HOH HOH 571 A WAT 72 3 HOH HOH 572 A WAT 73 3 HOH HOH 573 A WAT 74 3 HOH HOH 574 A WAT 75 3 HOH HOH 575 A WAT 76 3 HOH HOH 576 A WAT 77 3 HOH HOH 577 A WAT 78 3 HOH HOH 578 A WAT 79 3 HOH HOH 579 A WAT 80 3 HOH HOH 580 A WAT 81 3 HOH HOH 581 A WAT 82 3 HOH HOH 582 A WAT 83 3 HOH HOH 583 A WAT 84 3 HOH HOH 584 A WAT 85 3 HOH HOH 585 A WAT 86 3 HOH HOH 586 A WAT 87 3 HOH HOH 587 A WAT 88 3 HOH HOH 588 A WAT 89 3 HOH HOH 589 A WAT 90 3 HOH HOH 590 A WAT 91 3 HOH HOH 591 A WAT 92 3 HOH HOH 592 A WAT 93 3 HOH HOH 593 A WAT 94 3 HOH HOH 594 A WAT 95 3 HOH HOH 595 A MET 1 n 1 MET 1 A GLU 2 n 2 GLU 2 A ILE 3 n 3 ILE 3 A GLY 4 n 4 GLY 4 A VAL 5 n 5 VAL 5 A PRO 6 n 6 PRO 6 A LYS 7 n 7 LYS 7 A GLU 8 n 8 GLU 8 A ILE 9 n 9 ILE 9 A LYS 10 n 10 LYS 10 A ASN 11 n 11 ASN 11 A GLN 12 n 12 GLN 12 A GLU 13 n 13 GLU 13 A PHE 14 n 14 PHE 14 A ARG 15 n 15 ARG 15 A VAL 16 n 16 VAL 16 A GLY 17 n 17 GLY 17 A LEU 18 n 18 LEU 18 A SER 19 n 19 SER 19 A PRO 20 n 20 PRO 20 A SER 21 n 21 SER 21 A SER 22 n 22 SER 22 A VAL 23 n 23 VAL 23 A ARG 24 n 24 ARG 24 A THR 25 n 25 THR 25 A LEU 26 n 26 LEU 26 A VAL 27 n 27 VAL 27 A GLU 28 n 28 GLU 28 A ALA 29 n 29 ALA 29 A GLY 30 n 30 GLY 30 A HIS 31 n 31 HIS 31 A THR 32 n 32 THR 32 A VAL 33 n 33 VAL 33 A PHE 34 n 34 PHE 34 A ILE 35 n 35 ILE 35 A GLU 36 n 36 GLU 36 A THR 37 n 37 THR 37 A GLN 38 n 38 GLN 38 A ALA 39 n 39 ALA 39 A GLY 40 n 40 GLY 40 A ILE 41 n 41 ILE 41 A GLY 42 n 42 GLY 42 A ALA 43 n 43 ALA 43 A GLY 44 n 44 GLY 44 A PHE 45 n 45 PHE 45 A ALA 46 n 46 ALA 46 A ASP 47 n 47 ASP 47 A GLN 48 n 48 GLN 48 A ASP 49 n 49 ASP 49 A TYR 50 n 50 TYR 50 A VAL 51 n 51 VAL 51 A GLN 52 n 52 GLN 52 A ALA 53 n 53 ALA 53 A GLY 54 n 54 GLY 54 A ALA 55 n 55 ALA 55 A GLN 56 n 56 GLN 56 A VAL 57 n 57 VAL 57 A VAL 58 n 58 VAL 58 A PRO 59 n 59 PRO 59 A SER 60 n 60 SER 60 A ALA 61 n 61 ALA 61 A LYS 62 n 62 LYS 62 A ASP 63 n 63 ASP 63 A ALA 64 n 64 ALA 64 A TRP 65 n 65 TRP 65 A SER 66 n 66 SER 66 A ARG 67 n 67 ARG 67 A GLU 68 n 68 GLU 68 A MET 69 n 69 MET 69 A VAL 70 n 70 VAL 70 A VAL 71 n 71 VAL 71 A LYS 72 n 72 LYS 72 A VAL 73 n 73 VAL 73 A LYS 74 n 74 LYS 74 A GLU 75 n 75 GLU 75 A PRO 76 n 76 PRO 76 A LEU 77 n 77 LEU 77 A PRO 78 n 78 PRO 78 A ALA 79 n 79 ALA 79 A GLU 80 n 80 GLU 80 A TYR 81 n 81 TYR 81 A ASP 82 n 82 ASP 82 A LEU 83 n 83 LEU 83 A MET 84 n 84 MET 84 A GLN 85 n 85 GLN 85 A LYS 86 n 86 LYS 86 A ASP 87 n 87 ASP 87 A GLN 88 n 88 GLN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A PHE 91 n 91 PHE 91 A THR 92 n 92 THR 92 A TYR 93 n 93 TYR 93 A LEU 94 n 94 LEU 94 A HIS 95 n 95 HIS 95 A LEU 96 n 96 LEU 96 A ALA 97 n 97 ALA 97 A ALA 98 n 98 ALA 98 A ALA 99 n 99 ALA 99 A ARG 100 n 100 ARG 100 A GLU 101 n 101 GLU 101 A LEU 102 n 102 LEU 102 A THR 103 n 103 THR 103 A GLU 104 n 104 GLU 104 A GLN 105 n 105 GLN 105 A LEU 106 n 106 LEU 106 A MET 107 n 107 MET 107 A ARG 108 n 108 ARG 108 A VAL 109 n 109 VAL 109 A GLY 110 n 110 GLY 110 A LEU 111 n 111 LEU 111 A THR 112 n 112 THR 112 A ALA 113 n 113 ALA 113 A ILE 114 n 114 ILE 114 A ALA 115 n 115 ALA 115 A TYR 116 n 116 TYR 116 A GLU 117 n 117 GLU 117 A THR 118 n 118 THR 118 A VAL 119 n 119 VAL 119 A GLU 120 n 120 GLU 120 A LEU 121 n 121 LEU 121 A PRO 122 n 122 PRO 122 A ASN 123 n 123 ASN 123 A ARG 124 n 124 ARG 124 A SER 125 n 125 SER 125 A LEU 126 n 126 LEU 126 A PRO 127 n 127 PRO 127 A LEU 128 n 128 LEU 128 A LEU 129 n 129 LEU 129 A THR 130 n 130 THR 130 A PRO 131 n 131 PRO 131 A MET 132 n 132 MET 132 A SER 133 n 133 SER 133 A ILE 134 n 134 ILE 134 A ILE 135 n 135 ILE 135 A ALA 136 n 136 ALA 136 A GLY 137 n 137 GLY 137 A ARG 138 n 138 ARG 138 A LEU 139 n 139 LEU 139 A SER 140 n 140 SER 140 A VAL 141 n 141 VAL 141 A GLN 142 n 142 GLN 142 A PHE 143 n 143 PHE 143 A GLY 144 n 144 GLY 144 A ALA 145 n 145 ALA 145 A ARG 146 n 146 ARG 146 A PHE 147 n 147 PHE 147 A LEU 148 n 148 LEU 148 A GLU 149 n 149 GLU 149 A ARG 150 n 150 ARG 150 A GLN 151 n 151 GLN 151 A GLN 152 n 152 GLN 152 A GLY 153 n 153 GLY 153 A GLY 154 n 154 GLY 154 A ARG 155 n 155 ARG 155 A GLY 156 n 156 GLY 156 A VAL 157 n 157 VAL 157 A LEU 158 n 158 LEU 158 A LEU 159 n 159 LEU 159 A GLY 160 n 160 GLY 160 A GLY 161 n 161 GLY 161 A VAL 162 n 162 VAL 162 A PRO 163 n 163 PRO 163 A GLY 164 n 164 GLY 164 A VAL 165 n 165 VAL 165 A LYS 166 n 166 LYS 166 A PRO 167 n 167 PRO 167 A GLY 168 n 168 GLY 168 A LYS 169 n 169 LYS 169 A VAL 170 n 170 VAL 170 A VAL 171 n 171 VAL 171 A ILE 172 n 172 ILE 172 A LEU 173 n 173 LEU 173 A GLY 174 n 174 GLY 174 A GLY 175 n 175 GLY 175 A GLY 176 n 176 GLY 176 A VAL 177 n 177 VAL 177 A VAL 178 n 178 VAL 178 A GLY 179 n 179 GLY 179 A THR 180 n 180 THR 180 A GLU 181 n 181 GLU 181 A ALA 182 n 182 ALA 182 A ALA 183 n 183 ALA 183 A LYS 184 n 184 LYS 184 A MET 185 n 185 MET 185 A ALA 186 n 186 ALA 186 A VAL 187 n 187 VAL 187 A GLY 188 n 188 GLY 188 A LEU 189 n 189 LEU 189 A GLY 190 n 190 GLY 190 A ALA 191 n 191 ALA 191 A GLN 192 n 192 GLN 192 A VAL 193 n 193 VAL 193 A GLN 194 n 194 GLN 194 A ILE 195 n 195 ILE 195 A PHE 196 n 196 PHE 196 A ASP 197 n 197 ASP 197 A ILE 198 n 198 ILE 198 A ASN 199 n 199 ASN 199 A VAL 200 n 200 VAL 200 A GLU 201 n 201 GLU 201 A ARG 202 n 202 ARG 202 A LEU 203 n 203 LEU 203 A SER 204 n 204 SER 204 A TYR 205 n 205 TYR 205 A LEU 206 n 206 LEU 206 A GLU 207 n 207 GLU 207 A THR 208 n 208 THR 208 A LEU 209 n 209 LEU 209 A PHE 210 n 210 PHE 210 A GLY 211 n 211 GLY 211 A SER 212 n 212 SER 212 A ARG 213 n 213 ARG 213 A VAL 214 n 214 VAL 214 A GLU 215 n 215 GLU 215 A LEU 216 n 216 LEU 216 A LEU 217 n 217 LEU 217 A TYR 218 n 218 TYR 218 A SER 219 n 219 SER 219 A ASN 220 n 220 ASN 220 A SER 221 n 221 SER 221 A ALA 222 n 222 ALA 222 A GLU 223 n 223 GLU 223 A ILE 224 n 224 ILE 224 A GLU 225 n 225 GLU 225 A THR 226 n 226 THR 226 A ALA 227 n 227 ALA 227 A VAL 228 n 228 VAL 228 A ALA 229 n 229 ALA 229 A GLU 230 n 230 GLU 230 A ALA 231 n 231 ALA 231 A ASP 232 n 232 ASP 232 A LEU 233 n 233 LEU 233 A LEU 234 n 234 LEU 234 A ILE 235 n 235 ILE 235 A GLY 236 n 236 GLY 236 A ALA 237 n 237 ALA 237 A VAL 238 n 238 VAL 238 A LEU 239 n 239 LEU 239 A VAL 240 n 240 VAL 240 A PRO 241 n 241 PRO 241 A GLY 242 n 242 GLY 242 A ARG 243 n 243 ARG 243 A ARG 244 n 244 ARG 244 A ALA 245 n 245 ALA 245 A PRO 246 n 246 PRO 246 A ILE 247 n 247 ILE 247 A LEU 248 n 248 LEU 248 A VAL 249 n 249 VAL 249 A PRO 250 n 250 PRO 250 A ALA 251 n 251 ALA 251 A SER 252 n 252 SER 252 A LEU 253 n 253 LEU 253 A VAL 254 n 254 VAL 254 A GLU 255 n 255 GLU 255 A GLN 256 n 256 GLN 256 A MET 257 n 257 MET 257 A ARG 258 n 258 ARG 258 A THR 259 n 259 THR 259 A GLY 260 n 260 GLY 260 A SER 261 n 261 SER 261 A VAL 262 n 262 VAL 262 A ILE 263 n 263 ILE 263 A VAL 264 n 264 VAL 264 A ASP 265 n 265 ASP 265 A VAL 266 n 266 VAL 266 A ALA 267 n 267 ALA 267 A VAL 268 n 268 VAL 268 A ASP 269 n 269 ASP 269 A GLN 270 n 270 GLN 270 A GLY 271 n 271 GLY 271 A GLY 272 n 272 GLY 272 A CYS 273 n 273 CYS 273 A VAL 274 n 274 VAL 274 A GLU 275 n 275 GLU 275 A THR 276 n 276 THR 276 A LEU 277 n 277 LEU 277 A HIS 278 n 278 HIS 278 A PRO 279 n 279 PRO 279 A THR 280 n 280 THR 280 A SER 281 n 281 SER 281 A HIS 282 n 282 HIS 282 A THR 283 n 283 THR 283 A GLN 284 n 284 GLN 284 A PRO 285 n 285 PRO 285 A THR 286 n 286 THR 286 A TYR 287 n 287 TYR 287 A GLU 288 n 288 GLU 288 A VAL 289 n 289 VAL 289 A PHE 290 n 290 PHE 290 A GLY 291 n 291 GLY 291 A VAL 292 n 292 VAL 292 A VAL 293 n 293 VAL 293 A HIS 294 n 294 HIS 294 A TYR 295 n 295 TYR 295 A GLY 296 n 296 GLY 296 A VAL 297 n 297 VAL 297 A PRO 298 n 298 PRO 298 A ASN 299 n 299 ASN 299 A MET 300 n 300 MET 300 A PRO 301 n 301 PRO 301 A GLY 302 n 302 GLY 302 A ALA 303 n 303 ALA 303 A VAL 304 n 304 VAL 304 A PRO 305 n 305 PRO 305 A TRP 306 n 306 TRP 306 A THR 307 n 307 THR 307 A ALA 308 n 308 ALA 308 A THR 309 n 309 THR 309 A GLN 310 n 310 GLN 310 A ALA 311 n 311 ALA 311 A LEU 312 n 312 LEU 312 A ASN 313 n 313 ASN 313 A ASN 314 n 314 ASN 314 A SER 315 n 315 SER 315 A THR 316 n 316 THR 316 A LEU 317 n 317 LEU 317 A PRO 318 n 318 PRO 318 A TYR 319 n 319 TYR 319 A VAL 320 n 320 VAL 320 A VAL 321 n 321 VAL 321 A LYS 322 n 322 LYS 322 A LEU 323 n 323 LEU 323 A ALA 324 n 324 ALA 324 A ASN 325 n 325 ASN 325 A GLN 326 n 326 GLN 326 A GLY 327 n 327 GLY 327 A LEU 328 n 328 LEU 328 A LYS 329 n 329 LYS 329 A ALA 330 n 330 ALA 330 A LEU 331 n 331 LEU 331 A GLU 332 n 332 GLU 332 A THR 333 n 333 THR 333 A ASP 334 n 334 ASP 334 A ASP 335 n 335 ASP 335 A ALA 336 n 336 ALA 336 A LEU 337 n 337 LEU 337 A ALA 338 n 338 ALA 338 A LYS 339 n 339 LYS 339 A GLY 340 n 340 GLY 340 A LEU 341 n 341 LEU 341 A ASN 342 n 342 ASN 342 A VAL 343 n 343 VAL 343 A GLN 344 n 344 GLN 344 A ALA 345 n 345 ALA 345 A HIS 346 n 346 HIS 346 A ARG 347 n 347 ARG 347 A LEU 348 n 348 LEU 348 A VAL 349 n 349 VAL 349 A HIS 350 n 350 HIS 350 A PRO 351 n 351 PRO 351 A ALA 352 n 352 ALA 352 A VAL 353 n 353 VAL 353 A GLN 354 n 354 GLN 354 A GLN 355 n 355 GLN 355 A VAL 356 n 356 VAL 356 A PHE 357 n 357 PHE 357 A PRO 358 n 358 PRO 358 A ASP 359 n 359 ASP 359 A LEU 360 n 360 LEU 360 A ALA 361 n 361 ALA 361 A 0.2000000 0.2600000 5.00 author_and_software_defined_assembly PISA,PQS 6 hexameric 27640 -106 74890 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -y,x-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_555 -x+y,-x,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 5_555 x-y,-y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_555 -x,-x+y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 3 A O ILE 3 A N THR 32 A N THR 32 A O ILE 35 A O ILE 35 A N GLN 56 A N GLN 56 A O VAL 70 A O VAL 70 A N LEU 89 A N LEU 89 A O LEU 90 A O LEU 90 A N THR 112 A N THR 112 A O ALA 113 A O ALA 113 A N VAL 343 A N VAL 343 A O TYR 287 A O TYR 287 A N HIS 294 A N HIS 294 A O VAL 293 A O VAL 293 A N ILE 263 A N ILE 263 A O VAL 262 A O VAL 262 A N LEU 234 A N LEU 234 A O LEU 233 A O LEU 233 A N VAL 171 A N VAL 171 A O VAL 170 A O VAL 170 A N GLN 192 A N GLN 192 A O ILE 195 A O ILE 195 A N GLU 215 A N GLU 215 1 A HOH 518 C HOH 1 A HOH 524 C HOH 1 A A O O HOH HOH 593 595 2.02 1 -13.20 2.10 128.40 115.20 A A A C N CD PHE PRO PRO 357 358 358 Y 1 A A CB CG GLN GLN 88 88 -0.182 0.027 1.521 1.339 N 1 A A SD CE MET MET 257 257 -0.453 0.056 1.774 1.321 N 1 A A NZ OE2 LYS GLU 184 207 2.18 1_555 2_555 1 A ALA 237 -142.45 33.91 1 A ARG 243 168.12 -159.94 1 A ALA 267 -76.60 27.16 1 A GLN 270 146.10 0.66 1 A GLN 284 -172.99 76.12 1 A HIS 346 72.91 -1.15 0.2600000 0.2000000 2.00 30.0 31042 5.000 85.0 RANDOM 1 TNT FREE R 0.000 ISOMORPHOUS TO NATIVE ENGH AND HUBER MOEWS AND KRETSINGER 334.3 0.85 2.00 30.0 95 2854 44 0 2715 0.017 2813 1.500 1.200 3818 3.000 17.800 1658 0.000 0.000 0.009 67 4.000 0.016 406 9.000 2.000 18.000 1PJC 188299 0.000 0.0440000 1 13.1000 3.100 92.0 0.4300000 2.00 2.05 1.600 1 3.20 94.1 model building CCP4 refinement TNT 5E data reduction MOSFLM data scaling CCP4 (AGROVATA data scaling ROTAVATA phasing CCP4 L-ALANINE DEHYDROGENASE COMPLEXED WITH NAD 1 N N 2 N N 3 N N A PRO 20 A PRO 20 HELX_P A ALA 29 A ALA 29 1 1 10 A ILE 41 A ILE 41 HELX_P A ALA 43 A ALA 43 5 2 3 A ASP 47 A ASP 47 HELX_P A ALA 53 A ALA 53 1 3 7 A ALA 61 A ALA 61 HELX_P A TRP 65 A TRP 65 1 4 5 A PRO 78 A PRO 78 HELX_P A LEU 83 A LEU 83 5 5 6 A LEU 96 A LEU 96 HELX_P A ALA 98 A ALA 98 5 6 3 A ARG 100 A ARG 100 HELX_P A VAL 109 A VAL 109 1 7 10 A TYR 116 A TYR 116 HELX_P A THR 118 A THR 118 5 8 3 A PRO 127 A PRO 127 HELX_P A PHE 147 A PHE 147 1 9 21 A ARG 150 A ARG 150 HELX_P A GLN 152 A GLN 152 5 10 3 A VAL 177 A VAL 177 HELX_P A GLY 188 A GLY 188 1 11 12 A VAL 200 A VAL 200 HELX_P A ARG 213 A ARG 213 1 12 14 A SER 221 A SER 221 HELX_P A GLU 230 A GLU 230 1 13 10 A ALA 251 A ALA 251 HELX_P A GLN 256 A GLN 256 1 14 6 A MET 300 A MET 300 HELX_P A THR 333 A THR 333 5 15 34 A ASP 335 A ASP 335 HELX_P A GLY 340 A GLY 340 1 16 6 A PRO 351 A PRO 351 HELX_P A GLN 354 A GLN 354 1 17 4 OXIDOREDUCTASE OXIDOREDUCTASE, NAD O52942_PHOLP UNP 1 O52942 1 361 1PJC 1 361 O52942 A 1 1 361 3 4 7 parallel parallel parallel parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel A GLU 2 A GLU 2 A VAL 5 A VAL 5 A THR 32 A THR 32 A GLU 36 A GLU 36 A GLN 56 A GLN 56 A VAL 58 A VAL 58 A MET 69 A MET 69 A VAL 71 A VAL 71 A LEU 89 A LEU 89 A THR 92 A THR 92 A THR 112 A THR 112 A ALA 115 A ALA 115 A LEU 341 A LEU 341 A GLN 344 A GLN 344 A THR 286 A THR 286 A VAL 289 A VAL 289 A VAL 292 A VAL 292 A TYR 295 A TYR 295 A VAL 262 A VAL 262 A ASP 265 A ASP 265 A LEU 233 A LEU 233 A GLY 236 A GLY 236 A LYS 169 A LYS 169 A LEU 173 A LEU 173 A GLN 192 A GLN 192 A ASP 197 A ASP 197 A GLU 215 A GLU 215 A TYR 218 A TYR 218 BINDING SITE FOR RESIDUE NAD A 500 A NAD 500 Software 21 A SER 133 A SER 133 21 1_555 A ALA 136 A ALA 136 21 1_555 A GLY 174 A GLY 174 21 1_555 A GLY 176 A GLY 176 21 1_555 A VAL 177 A VAL 177 21 1_555 A VAL 178 A VAL 178 21 1_555 A ASP 197 A ASP 197 21 1_555 A ILE 198 A ILE 198 21 1_555 A SER 219 A SER 219 21 1_555 A ALA 237 A ALA 237 21 1_555 A VAL 238 A VAL 238 21 1_555 A LEU 239 A LEU 239 21 1_555 A VAL 266 A VAL 266 21 1_555 A ALA 267 A ALA 267 21 1_555 A GLN 270 A GLN 270 21 1_555 A ASN 299 A ASN 299 21 1_555 A MET 300 A MET 300 21 1_555 A PRO 301 A PRO 301 21 1_555 A HOH 503 C HOH 21 1_555 A HOH 579 C HOH 21 1_555 A HOH 592 C HOH 21 1_555 155 H 3 2