0.010875 0.000000 0.000000 0.000000 0.010875 0.000000 0.000000 0.000000 0.007038 0.00000 0.00000 0.00000 Pereira, K. Serre, L. Zelwer, C. Castaing, B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 91.955 91.955 142.076 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H9 O5 P 156.074 PHOSPHORIC ACID MONO-(3-HYDROXY-PROPYL) ESTER non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N C N 281 N O N 282 N C N 283 N O N 284 N C N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C Y 299 N C Y 300 N N Y 301 N C Y 302 N C Y 303 N N N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N O N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 S C N 323 N C N 324 N C N 325 N C N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C N 345 N C N 346 N C N 347 N C N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C N 367 N C N 368 N C N 369 N C N 370 N N N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N N N 388 S C N 389 N C N 390 N O N 391 N C N 392 N C N 393 N S N 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N O N 408 N P N 409 N O N 410 N O N 411 N O N 412 N C N 413 N C N 414 N C N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N N N 426 S C N 427 N C N 428 N O N 429 N C Y 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N C N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 N C N 453 N C N 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C N 470 N O N 471 N O N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N N N 480 S C N 481 N C N 482 N O N 483 R C N 484 N O N 485 N C N 486 N O N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N N N 497 S C N 498 N C N 499 N O N 500 N C Y 501 N C Y 502 N C Y 503 N C Y 504 N N Y 505 N C Y 506 N C Y 507 N C Y 508 N C Y 509 N C N 510 N O N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N N N 524 S C N 525 N C N 526 N O N 527 N C Y 528 N C Y 529 N C Y 530 N C Y 531 N C Y 532 N C Y 533 N C N 534 N O N 535 N O N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N N N 548 S C N 549 N C N 550 N O N 551 N C N 552 N C N 553 N C N 554 N O N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N sing Y 303 N doub Y 304 N doub N 305 N sing Y 306 N sing N 307 N sing Y 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing Y 427 N doub Y 428 N sing Y 429 N sing N 430 N sing Y 431 N doub N 432 N sing Y 433 N doub N 434 N sing Y 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N doub N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N doub N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N doub N 492 N sing N 493 N sing N 494 N sing N 495 N sing Y 496 N doub Y 497 N sing Y 498 N sing N 499 N sing Y 500 N doub Y 501 N sing Y 502 N sing N 503 N sing Y 504 N sing Y 505 N doub N 506 N sing Y 507 N doub N 508 N sing Y 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N doub N 520 N sing N 521 N sing N 522 N sing N 523 N sing Y 524 N doub Y 525 N sing Y 526 N sing N 527 N sing Y 528 N doub N 529 N sing Y 530 N doub N 531 N sing Y 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N doub N 544 N sing N 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 33 5936 5944 10.1093/nar/gki879 16243784 Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. 2005 UK Embo J. EMJODG 0897 0261-4189 21 2854 2865 crystal structure of the lactococcus lactis FPG bound to an abasic site analogue containing DNA 2002 10.2210/pdb1pji/pdb pdb_00001pji 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2003-05-01 MARRESEARCH MIRROR SINGLE WAVELENGTH M x-ray 1 0.97 1.0 BM30A ESRF 0.97 SYNCHROTRON ESRF BEAMLINE BM30A 4012.577 DNA (5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*CP*G)-3') 1 syn polymer 4355.884 DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3') 1 syn polymer 31116.217 Formamidopyrimidine-DNA glycosylase 3.2.2.23 1 man polymer 65.409 ZINC ION 1 syn non-polymer 92.094 GLYCEROL 4 syn non-polymer 18.015 water 223 nat water FAPY-DNA glycosylase 3.2.2.23 no yes (DC)(DT)(DC)(DT)(DT)(DT)(PDI)(DT)(DT)(DT)(DC)(DT)(DC)(DG) CTCTTTXTTTCTCG D polydeoxyribonucleotide no no (DG)(DC)(DG)(DA)(DG)(DA)(DA)(DA)(DC)(DA)(DA)(DA)(DG)(DA) GCGAGAAACAAAGA E polydeoxyribonucleotide no no PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYL LEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYGK TGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYL LEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQNELQVYGK TGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lactococcus Lactococcus lactis subsp. cremoris Escherichia sample MUTM OR FPG 1359 Lactococcus lactis subsp. cremoris 562 Escherichia coli PLASMID PMAL-C 1 3.77 67.40 VAPOR DIFFUSION, HANGING DROP 8.5 citrate, Hepes, glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 296K 296 citrate 1 Hepes 1 glycerol 1 water 1 citrate 2 glycerol 2 -0.248 1 20 D 2 E 28 1.257 D_DT2:DA28_E 1 -6.965 -0.255 0.033 -0.013 0.691 1 19 D 3 E 27 0.340 D_DC3:DG27_E 2 -7.485 0.120 -0.023 -0.127 -2.976 1 20 D 4 E 26 2.452 D_DT4:DA26_E 3 -8.663 -0.146 0.061 0.001 2.181 1 20 D 5 E 25 4.712 D_DT5:DA25_E 4 -6.436 -0.077 -0.181 -0.143 16.077 1 20 D 6 E 24 -0.061 D_DT6:DA24_E 5 2.082 -0.036 -0.391 -0.044 -8.482 1 20 D 8 E 22 -0.289 D_DT8:DA22_E 6 -1.307 -0.081 -0.041 -0.106 1.023 1 20 D 9 E 21 -0.743 D_DT9:DA21_E 7 -9.520 -0.110 -0.318 0.000 3.457 1 20 D 10 E 20 -0.016 D_DT10:DA20_E 8 -4.841 -0.106 -0.205 -0.063 2.483 1 19 D 11 E 19 -1.857 D_DC11:DG19_E 9 -12.432 0.217 -0.180 -0.039 -4.639 1 20 D 12 E 18 5.231 D_DT12:DA18_E 10 -16.181 0.572 0.492 0.091 -3.217 1 19 D 13 E 17 0.481 D_DC13:DG17_E 11 -11.868 0.248 0.092 -0.064 -2.228 1 19 D 14 E 16 1.512 D_DG14:DC16_E 12 -6.885 0.095 -0.308 -0.097 3.320 38.391 D D 2 3 3.912 E E 28 27 3.315 2.569 0.541 -0.177 DD_DT2DC3:DG27DA28_EE 1 2.067 -3.148 38.255 -0.595 -0.560 3.271 32.552 D D 3 4 10.249 E E 27 26 3.413 5.715 0.261 -0.584 DD_DC3DT4:DA26DG27_EE 2 1.416 -2.539 32.030 -2.069 -0.211 3.140 33.580 D D 4 5 7.186 E E 26 25 3.187 4.142 0.059 -0.212 DD_DT4DT5:DA25DA26_EE 3 0.628 -1.089 33.325 -1.026 -0.003 2.987 28.958 D D 5 6 22.867 E E 25 24 3.200 11.134 -0.094 0.124 DD_DT5DT6:DA24DA25_EE 4 2.716 -5.578 26.638 -2.183 0.782 3.115 30.064 D D 8 9 4.838 E E 22 21 3.134 2.506 0.078 -0.106 DD_DT8DT9:DA21DA22_EE 5 1.506 -2.908 29.925 -0.696 0.144 3.382 35.243 D D 9 10 5.814 E E 21 20 3.353 3.513 0.862 0.053 DD_DT9DT10:DA20DA21_EE 6 1.860 -3.078 35.025 -0.450 -1.139 3.457 34.644 D D 10 11 -2.044 E E 20 19 3.400 -1.216 -0.826 -0.287 DD_DT10DC11:DG19DA20_EE 7 -2.477 4.164 34.538 -0.286 0.987 3.618 35.228 D D 11 12 6.262 E E 19 18 3.647 3.782 -0.360 -0.212 DD_DC11DT12:DA18DG19_EE 8 -1.884 3.120 34.982 -0.977 0.282 3.084 33.167 D D 12 13 8.908 E E 18 17 3.141 5.061 -0.058 -0.052 DD_DT12DC13:DG17DA18_EE 9 2.724 -4.794 32.679 -0.907 0.539 3.518 34.462 D D 13 14 17.722 E E 17 16 3.414 10.324 0.484 0.754 DD_DC13DG14:DC16DG17_EE 10 4.004 -6.873 32.686 -0.475 -0.138 atom_site chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_conn_type struct_site repository Initial release Version format compliance Non-polymer description Version format compliance Atomic model Data collection Database references Derived calculations Refinement description 1 0 2004-08-03 1 1 2008-04-29 1 2 2011-07-13 2 0 2023-08-16 _atom_site.occupancy _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id sequence The author maintains that the sequence database residue Asp139 is an error. This residue does not exist. RCSB Y RCSB 2003-06-03 REL REL ZN ZINC ION GOL GLYCEROL HOH water synthetic sample synthetic sample 1KFV PDB experimental model ZN 300 4 ZN ZN 300 A CRY 1 5 GOL GOL 1001 A CRY 2 5 GOL GOL 1002 A CRY 3 5 GOL GOL 1003 A CRY 4 5 GOL GOL 1004 A WAT 14 6 HOH HOH 15 D WAT 20 6 HOH HOH 16 D WAT 38 6 HOH HOH 17 D WAT 57 6 HOH HOH 18 D WAT 78 6 HOH HOH 19 D WAT 80 6 HOH HOH 20 D WAT 86 6 HOH HOH 21 D WAT 90 6 HOH HOH 22 D WAT 112 6 HOH HOH 23 D WAT 115 6 HOH HOH 24 D WAT 116 6 HOH HOH 25 D WAT 131 6 HOH HOH 26 D WAT 163 6 HOH HOH 27 D WAT 166 6 HOH HOH 28 D WAT 174 6 HOH HOH 29 D WAT 61 6 HOH HOH 61 E WAT 75 6 HOH HOH 75 E WAT 85 6 HOH HOH 85 E WAT 136 6 HOH HOH 136 E WAT 142 6 HOH HOH 142 E WAT 143 6 HOH HOH 143 E WAT 156 6 HOH HOH 156 E WAT 160 6 HOH HOH 160 E WAT 168 6 HOH HOH 168 E WAT 182 6 HOH HOH 182 E WAT 204 6 HOH HOH 204 E WAT 206 6 HOH HOH 206 E WAT 207 6 HOH HOH 207 E WAT 208 6 HOH HOH 208 E WAT 209 6 HOH HOH 209 E WAT 212 6 HOH HOH 212 E WAT 220 6 HOH HOH 220 E WAT 1 6 HOH HOH 1005 A WAT 2 6 HOH HOH 1006 A WAT 3 6 HOH HOH 1007 A WAT 4 6 HOH HOH 1008 A WAT 5 6 HOH HOH 1009 A WAT 6 6 HOH HOH 1010 A WAT 7 6 HOH HOH 1011 A WAT 8 6 HOH HOH 1012 A WAT 9 6 HOH HOH 1013 A WAT 10 6 HOH HOH 1014 A WAT 11 6 HOH HOH 1015 A WAT 12 6 HOH HOH 1016 A WAT 13 6 HOH HOH 1017 A WAT 15 6 HOH HOH 1018 A WAT 16 6 HOH HOH 1019 A WAT 17 6 HOH HOH 1020 A WAT 18 6 HOH HOH 1021 A WAT 19 6 HOH HOH 1022 A WAT 21 6 HOH HOH 1023 A WAT 22 6 HOH HOH 1024 A WAT 23 6 HOH HOH 1025 A WAT 24 6 HOH HOH 1026 A WAT 25 6 HOH HOH 1027 A WAT 26 6 HOH HOH 1028 A WAT 27 6 HOH HOH 1029 A WAT 28 6 HOH HOH 1030 A WAT 29 6 HOH HOH 1031 A WAT 30 6 HOH HOH 1032 A WAT 31 6 HOH HOH 1033 A WAT 32 6 HOH HOH 1034 A WAT 33 6 HOH HOH 1035 A WAT 34 6 HOH HOH 1036 A WAT 35 6 HOH HOH 1037 A WAT 36 6 HOH HOH 1038 A WAT 37 6 HOH HOH 1039 A WAT 39 6 HOH HOH 1040 A WAT 40 6 HOH HOH 1041 A WAT 41 6 HOH HOH 1042 A WAT 42 6 HOH HOH 1043 A WAT 43 6 HOH HOH 1044 A WAT 44 6 HOH HOH 1045 A WAT 45 6 HOH HOH 1046 A WAT 46 6 HOH HOH 1047 A WAT 47 6 HOH HOH 1048 A WAT 48 6 HOH HOH 1049 A WAT 49 6 HOH HOH 1050 A WAT 50 6 HOH HOH 1051 A WAT 51 6 HOH HOH 1052 A WAT 52 6 HOH HOH 1053 A WAT 53 6 HOH HOH 1054 A WAT 54 6 HOH HOH 1055 A WAT 55 6 HOH HOH 1056 A WAT 56 6 HOH HOH 1057 A WAT 58 6 HOH HOH 1058 A WAT 59 6 HOH HOH 1059 A WAT 60 6 HOH HOH 1060 A WAT 62 6 HOH HOH 1061 A WAT 63 6 HOH HOH 1062 A WAT 64 6 HOH HOH 1063 A WAT 65 6 HOH HOH 1064 A WAT 66 6 HOH HOH 1065 A WAT 67 6 HOH HOH 1066 A WAT 68 6 HOH HOH 1067 A WAT 69 6 HOH HOH 1068 A WAT 70 6 HOH HOH 1069 A WAT 71 6 HOH HOH 1070 A WAT 72 6 HOH HOH 1071 A WAT 73 6 HOH HOH 1072 A WAT 74 6 HOH HOH 1073 A WAT 76 6 HOH HOH 1074 A WAT 77 6 HOH HOH 1075 A WAT 79 6 HOH HOH 1076 A WAT 81 6 HOH HOH 1077 A WAT 82 6 HOH HOH 1078 A WAT 83 6 HOH HOH 1079 A WAT 84 6 HOH HOH 1080 A WAT 87 6 HOH HOH 1081 A WAT 88 6 HOH HOH 1082 A WAT 89 6 HOH HOH 1083 A WAT 91 6 HOH HOH 1084 A WAT 92 6 HOH HOH 1085 A WAT 93 6 HOH HOH 1086 A WAT 94 6 HOH HOH 1087 A WAT 95 6 HOH HOH 1088 A WAT 96 6 HOH HOH 1089 A WAT 97 6 HOH HOH 1090 A WAT 98 6 HOH HOH 1091 A WAT 99 6 HOH HOH 1092 A WAT 100 6 HOH HOH 1093 A WAT 101 6 HOH HOH 1094 A WAT 102 6 HOH HOH 1095 A WAT 103 6 HOH HOH 1096 A WAT 104 6 HOH HOH 1097 A WAT 105 6 HOH HOH 1098 A WAT 106 6 HOH HOH 1099 A WAT 107 6 HOH HOH 1100 A WAT 108 6 HOH HOH 1101 A WAT 109 6 HOH HOH 1102 A WAT 110 6 HOH HOH 1103 A WAT 111 6 HOH HOH 1104 A WAT 113 6 HOH HOH 1105 A WAT 114 6 HOH HOH 1106 A WAT 117 6 HOH HOH 1107 A WAT 118 6 HOH HOH 1108 A WAT 119 6 HOH HOH 1109 A WAT 120 6 HOH HOH 1110 A WAT 121 6 HOH HOH 1111 A WAT 122 6 HOH HOH 1112 A WAT 123 6 HOH HOH 1113 A WAT 124 6 HOH HOH 1114 A WAT 125 6 HOH HOH 1115 A WAT 126 6 HOH HOH 1116 A WAT 127 6 HOH HOH 1117 A WAT 128 6 HOH HOH 1118 A WAT 129 6 HOH HOH 1119 A WAT 130 6 HOH HOH 1120 A WAT 132 6 HOH HOH 1121 A WAT 133 6 HOH HOH 1122 A WAT 134 6 HOH HOH 1123 A WAT 135 6 HOH HOH 1124 A WAT 137 6 HOH HOH 1125 A WAT 138 6 HOH HOH 1126 A WAT 139 6 HOH HOH 1127 A WAT 140 6 HOH HOH 1128 A WAT 141 6 HOH HOH 1129 A WAT 144 6 HOH HOH 1130 A WAT 145 6 HOH HOH 1131 A WAT 146 6 HOH HOH 1132 A WAT 147 6 HOH HOH 1133 A WAT 148 6 HOH HOH 1134 A WAT 149 6 HOH HOH 1135 A WAT 150 6 HOH HOH 1136 A WAT 151 6 HOH HOH 1137 A WAT 152 6 HOH HOH 1138 A WAT 153 6 HOH HOH 1139 A WAT 154 6 HOH HOH 1140 A WAT 155 6 HOH HOH 1141 A WAT 157 6 HOH HOH 1142 A WAT 158 6 HOH HOH 1143 A WAT 159 6 HOH HOH 1144 A WAT 161 6 HOH HOH 1145 A WAT 162 6 HOH HOH 1146 A WAT 164 6 HOH HOH 1147 A WAT 165 6 HOH HOH 1148 A WAT 167 6 HOH HOH 1149 A WAT 169 6 HOH HOH 1150 A WAT 170 6 HOH HOH 1151 A WAT 171 6 HOH HOH 1152 A WAT 172 6 HOH HOH 1153 A WAT 173 6 HOH HOH 1154 A WAT 175 6 HOH HOH 1155 A WAT 176 6 HOH HOH 1156 A WAT 177 6 HOH HOH 1157 A WAT 178 6 HOH HOH 1158 A WAT 179 6 HOH HOH 1159 A WAT 180 6 HOH HOH 1160 A WAT 181 6 HOH HOH 1161 A WAT 183 6 HOH HOH 1162 A WAT 184 6 HOH HOH 1163 A WAT 185 6 HOH HOH 1164 A WAT 186 6 HOH HOH 1165 A WAT 187 6 HOH HOH 1166 A WAT 188 6 HOH HOH 1167 A WAT 189 6 HOH HOH 1168 A WAT 190 6 HOH HOH 1169 A WAT 191 6 HOH HOH 1170 A WAT 192 6 HOH HOH 1171 A WAT 193 6 HOH HOH 1172 A WAT 194 6 HOH HOH 1173 A WAT 195 6 HOH HOH 1174 A WAT 196 6 HOH HOH 1175 A WAT 197 6 HOH HOH 1176 A WAT 198 6 HOH HOH 1177 A WAT 199 6 HOH HOH 1178 A WAT 200 6 HOH HOH 1179 A WAT 201 6 HOH HOH 1180 A WAT 202 6 HOH HOH 1181 A WAT 203 6 HOH HOH 1182 A WAT 205 6 HOH HOH 1183 A WAT 210 6 HOH HOH 1184 A WAT 211 6 HOH HOH 1185 A WAT 213 6 HOH HOH 1186 A WAT 214 6 HOH HOH 1187 A WAT 215 6 HOH HOH 1188 A WAT 216 6 HOH HOH 1189 A WAT 217 6 HOH HOH 1190 A WAT 218 6 HOH HOH 1191 A WAT 219 6 HOH HOH 1192 A WAT 221 6 HOH HOH 1193 A WAT 222 6 HOH HOH 1194 A WAT 223 6 HOH HOH 1195 A C 1 n 1 DC 1 D T 2 n 2 DT 2 D C 3 n 3 DC 3 D T 4 n 4 DT 4 D T 5 n 5 DT 5 D T 6 n 6 DT 6 D PDI 7 n 7 PDI 7 D T 8 n 8 DT 8 D T 9 n 9 DT 9 D T 10 n 10 DT 10 D C 11 n 11 DC 11 D T 12 n 12 DT 12 D C 13 n 13 DC 13 D G 14 n 14 DG 14 D G 15 n 1 DG 15 E C 16 n 2 DC 16 E G 17 n 3 DG 17 E A 18 n 4 DA 18 E G 19 n 5 DG 19 E A 20 n 6 DA 20 E A 21 n 7 DA 21 E A 22 n 8 DA 22 E C 23 n 9 DC 23 E A 24 n 10 DA 24 E A 25 n 11 DA 25 E A 26 n 12 DA 26 E G 27 n 13 DG 27 E A 28 n 14 DA 28 E PRO 1 n 1 PRO 1 A GLU 2 n 2 GLU 2 A LEU 3 n 3 LEU 3 A PRO 4 n 4 PRO 4 A GLU 5 n 5 GLU 5 A VAL 6 n 6 VAL 6 A GLU 7 n 7 GLU 7 A THR 8 n 8 THR 8 A VAL 9 n 9 VAL 9 A ARG 10 n 10 ARG 10 A ARG 11 n 11 ARG 11 A GLU 12 n 12 GLU 12 A LEU 13 n 13 LEU 13 A GLU 14 n 14 GLU 14 A LYS 15 n 15 LYS 15 A ARG 16 n 16 ARG 16 A ILE 17 n 17 ILE 17 A VAL 18 n 18 VAL 18 A GLY 19 n 19 GLY 19 A GLN 20 n 20 GLN 20 A LYS 21 n 21 LYS 21 A ILE 22 n 22 ILE 22 A ILE 23 n 23 ILE 23 A SER 24 n 24 SER 24 A ILE 25 n 25 ILE 25 A GLU 26 n 26 GLU 26 A ALA 27 n 27 ALA 27 A THR 28 n 28 THR 28 A TYR 29 n 29 TYR 29 A PRO 30 n 30 PRO 30 A ARG 31 n 31 ARG 31 A MET 32 n 32 MET 32 A VAL 33 n 33 VAL 33 A LEU 34 n 34 LEU 34 A THR 35 n 35 THR 35 A GLY 36 n 36 GLY 36 A PHE 37 n 37 PHE 37 A GLU 38 n 38 GLU 38 A GLN 39 n 39 GLN 39 A LEU 40 n 40 LEU 40 A LYS 41 n 41 LYS 41 A LYS 42 n 42 LYS 42 A GLU 43 n 43 GLU 43 A LEU 44 n 44 LEU 44 A THR 45 n 45 THR 45 A GLY 46 n 46 GLY 46 A LYS 47 n 47 LYS 47 A THR 48 n 48 THR 48 A ILE 49 n 49 ILE 49 A GLN 50 n 50 GLN 50 A GLY 51 n 51 GLY 51 A ILE 52 n 52 ILE 52 A SER 53 n 53 SER 53 A ARG 54 n 54 ARG 54 A ARG 55 n 55 ARG 55 A GLY 56 n 56 GLY 56 A LYS 57 n 57 LYS 57 A TYR 58 n 58 TYR 58 A LEU 59 n 59 LEU 59 A ILE 60 n 60 ILE 60 A PHE 61 n 61 PHE 61 A GLU 62 n 62 GLU 62 A ILE 63 n 63 ILE 63 A GLY 64 n 64 GLY 64 A ASP 65 n 65 ASP 65 A ASP 66 n 66 ASP 66 A PHE 67 n 67 PHE 67 A ARG 68 n 68 ARG 68 A LEU 69 n 69 LEU 69 A ILE 70 n 70 ILE 70 A SER 71 n 71 SER 71 A HIS 72 n 72 HIS 72 A LEU 73 n 73 LEU 73 A ARG 74 n 74 ARG 74 A MET 75 n 75 MET 75 A GLU 76 n 76 GLU 76 A GLY 77 n 77 GLY 77 A LYS 78 n 78 LYS 78 A TYR 79 n 79 TYR 79 A ARG 80 n 80 ARG 80 A LEU 81 n 81 LEU 81 A ALA 82 n 82 ALA 82 A THR 83 n 83 THR 83 A LEU 84 n 84 LEU 84 A ASP 85 n 85 ASP 85 A ALA 86 n 86 ALA 86 A PRO 87 n 87 PRO 87 A ALA 88 n 88 ARG 88 A GLU 89 n 89 GLU 89 A LYS 90 n 90 LYS 90 A HIS 91 n 91 HIS 91 A ASP 92 n 92 ASP 92 A HIS 93 n 93 HIS 93 A LEU 94 n 94 LEU 94 A THR 95 n 95 THR 95 A MET 96 n 96 MET 96 A LYS 97 n 97 LYS 97 A PHE 98 n 98 PHE 98 A ALA 99 n 99 ALA 99 A ASP 100 n 100 ASP 100 A GLY 101 n 101 GLY 101 A GLN 102 n 102 GLN 102 A LEU 103 n 103 LEU 103 A ILE 104 n 104 ILE 104 A TYR 105 n 105 TYR 105 A ALA 106 n 106 ALA 106 A ASP 107 n 107 ASP 107 A VAL 108 n 108 VAL 108 A ARG 109 n 109 ARG 109 A LYS 110 n 110 LYS 110 A PHE 111 n 111 PHE 111 A GLY 112 n 112 GLY 112 A THR 113 n 113 THR 113 A TRP 114 n 114 TRP 114 A GLU 115 n 115 GLU 115 A LEU 116 n 116 LEU 116 A ILE 117 n 117 ILE 117 A SER 118 n 118 SER 118 A THR 119 n 119 THR 119 A ASP 120 n 120 ASP 120 A GLN 121 n 121 GLN 121 A VAL 122 n 122 VAL 122 A LEU 123 n 123 LEU 123 A PRO 124 n 124 PRO 124 A TYR 125 n 125 TYR 125 A PHE 126 n 126 PHE 126 A LEU 127 n 127 LEU 127 A LYS 128 n 128 LYS 128 A LYS 129 n 129 LYS 129 A LYS 130 n 130 LYS 130 A ILE 131 n 131 ILE 131 A GLY 132 n 132 GLY 132 A PRO 133 n 133 PRO 133 A GLU 134 n 134 GLU 134 A PRO 135 n 135 PRO 135 A THR 136 n 136 THR 136 A TYR 137 n 137 TYR 137 A GLU 138 n 138 GLU 138 A ASP 139 n 139 ASP 139 A PHE 140 n 140 PHE 140 A ASP 141 n 141 ASP 141 A GLU 142 n 142 GLU 142 A LYS 143 n 143 LYS 143 A LEU 144 n 144 LEU 144 A PHE 145 n 145 PHE 145 A ARG 146 n 146 ARG 146 A GLU 147 n 147 GLU 147 A LYS 148 n 148 LYS 148 A LEU 149 n 149 LEU 149 A ARG 150 n 150 ARG 150 A LYS 151 n 151 LYS 151 A SER 152 n 152 SER 152 A THR 153 n 153 THR 153 A LYS 154 n 154 LYS 154 A LYS 155 n 155 LYS 155 A ILE 156 n 156 ILE 156 A LYS 157 n 157 LYS 157 A PRO 158 n 158 PRO 158 A TYR 159 n 159 TYR 159 A LEU 160 n 160 LEU 160 A LEU 161 n 161 LEU 161 A GLU 162 n 162 GLU 162 A GLN 163 n 163 GLN 163 A THR 164 n 164 THR 164 A LEU 165 n 165 LEU 165 A VAL 166 n 166 VAL 166 A ALA 167 n 167 ALA 167 A GLY 168 n 168 GLY 168 A LEU 169 n 169 LEU 169 A GLY 170 n 170 GLY 170 A ASN 171 n 171 ASN 171 A ILE 172 n 172 ILE 172 A TYR 173 n 173 TYR 173 A VAL 174 n 174 VAL 174 A ASP 175 n 175 ASP 175 A GLU 176 n 176 GLU 176 A VAL 177 n 177 VAL 177 A LEU 178 n 178 LEU 178 A TRP 179 n 179 TRP 179 A LEU 180 n 180 LEU 180 A ALA 181 n 181 ALA 181 A LYS 182 n 182 LYS 182 A ILE 183 n 183 ILE 183 A HIS 184 n 184 HIS 184 A PRO 185 n 185 PRO 185 A GLU 186 n 186 GLU 186 A LYS 187 n 187 LYS 187 A GLU 188 n 188 GLU 188 A THR 189 n 189 THR 189 A ASN 190 n 190 ASN 190 A GLN 191 n 191 GLN 191 A LEU 192 n 192 LEU 192 A ILE 193 n 193 ILE 193 A GLU 194 n 194 GLU 194 A SER 195 n 195 SER 195 A SER 196 n 196 SER 196 A ILE 197 n 197 ILE 197 A HIS 198 n 198 HIS 198 A LEU 199 n 199 LEU 199 A LEU 200 n 200 LEU 200 A HIS 201 n 201 HIS 201 A ASP 202 n 202 ASP 202 A SER 203 n 203 SER 203 A ILE 204 n 204 ILE 204 A ILE 205 n 205 ILE 205 A GLU 206 n 206 GLU 206 A ILE 207 n 207 ILE 207 A LEU 208 n 208 LEU 208 A GLN 209 n 209 GLN 209 A LYS 210 n 210 LYS 210 A ALA 211 n 211 ALA 211 A ILE 212 n 212 ILE 212 A LYS 213 n 213 LYS 213 A LEU 214 n 214 LEU 214 A GLY 215 n 215 GLY 215 A GLY 216 n 216 GLY 216 A SER 217 n 217 SER 217 A SER 218 n 218 SER 218 A n 219 219 A n 220 220 A n 221 221 A n 222 222 A SER 223 n 223 SER 223 A ALA 224 n 224 ALA 224 A LEU 225 n 225 LEU 225 A GLY 226 n 226 GLY 226 A SER 227 n 227 SER 227 A THR 228 n 228 THR 228 A GLY 229 n 229 GLY 229 A LYS 230 n 230 LYS 230 A MET 231 n 231 MET 231 A GLN 232 n 232 GLN 232 A ASN 233 n 233 ASN 233 A GLU 234 n 234 GLU 234 A LEU 235 n 235 LEU 235 A GLN 236 n 236 GLN 236 A VAL 237 n 237 VAL 237 A TYR 238 n 238 TYR 238 A GLY 239 n 239 GLY 239 A LYS 240 n 240 LYS 240 A THR 241 n 241 THR 241 A GLY 242 n 242 GLY 242 A GLU 243 n 243 GLU 243 A LYS 244 n 244 LYS 244 A CYS 245 n 245 CYS 245 A SER 246 n 246 SER 246 A ARG 247 n 247 ARG 247 A CYS 248 n 248 CYS 248 A GLY 249 n 249 GLY 249 A ALA 250 n 250 ALA 250 A GLU 251 n 251 GLU 251 A ILE 252 n 252 ILE 252 A GLN 253 n 253 GLN 253 A LYS 254 n 254 LYS 254 A ILE 255 n 255 ILE 255 A LYS 256 n 256 LYS 256 A VAL 257 n 257 VAL 257 A ALA 258 n 258 ALA 258 A GLY 259 n 259 GLY 259 A ARG 260 n 260 ARG 260 A GLY 261 n 261 GLY 261 A THR 262 n 262 THR 262 A HIS 263 n 263 HIS 263 A PHE 264 n 264 PHE 264 A CYS 265 n 265 CYS 265 A PRO 266 n 266 PRO 266 A VAL 267 n 267 VAL 267 A CYS 268 n 268 CYS 268 A GLN 269 n 269 GLN 269 A GLN 270 n 270 GLN 270 A LYS 271 n 271 LYS 271 A author_defined_assembly 3 trimeric A CYS 245 C SG CYS 245 1_555 A ZN 300 D ZN ZN 1_555 A CYS 248 C SG CYS 248 1_555 112.4 A CYS 245 C SG CYS 245 1_555 A ZN 300 D ZN ZN 1_555 A CYS 265 C SG CYS 265 1_555 112.3 A CYS 248 C SG CYS 248 1_555 A ZN 300 D ZN ZN 1_555 A CYS 265 C SG CYS 265 1_555 97.7 A CYS 245 C SG CYS 245 1_555 A ZN 300 D ZN ZN 1_555 A CYS 268 C SG CYS 268 1_555 105.4 A CYS 248 C SG CYS 248 1_555 A ZN 300 D ZN ZN 1_555 A CYS 268 C SG CYS 268 1_555 114.5 A CYS 265 C SG CYS 265 1_555 A ZN 300 D ZN ZN 1_555 A CYS 268 C SG CYS 268 1_555 114.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 24 C N SER 24 A O LYS 97 C O LYS 97 A N PHE 98 C N PHE 98 A O GLY 101 C O GLY 101 A O ALA 106 C O ALA 106 A N LYS 78 C N LYS 78 A N SER 53 C N SER 53 A O ILE 60 C O ILE 60 A N LEU 59 C N LEU 59 A O SER 71 C O SER 71 A N ILE 70 C N ILE 70 A O GLU 115 C O GLU 115 A N ILE 255 C N ILE 255 A O THR 262 C O THR 262 1 A CG ARG 88 C CG ARG 88 1 Y 1 A CD ARG 88 C CD ARG 88 1 Y 1 A NE ARG 88 C NE ARG 88 1 Y 1 A CZ ARG 88 C CZ ARG 88 1 Y 1 A NH1 ARG 88 C NH1 ARG 88 1 Y 1 A NH2 ARG 88 C NH2 ARG 88 1 Y 1 A ILE 219 C ILE 219 1 Y 1 A ARG 220 C ARG 220 1 Y 1 A THR 221 C THR 221 1 Y 1 A TYR 222 C TYR 222 1 Y 1 A A O O HOH HOH 1191 1191 0.31 1_555 8_555 1 A ARG 74 50.83 -126.35 1 A ARG 74 51.52 -126.35 1 A ALA 224 -173.75 107.50 1 A VAL 237 -137.82 -37.81 1 A GLN 269 -116.47 77.65 34.5 The water 218 is located close to a special position in the crystal 0.237 0.21 1.9 40 4766 48718 48299 99.1 RANDOM 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT 1KFV Engh & Huber 1.9 40 223 2945 25 554 2143 0.005481 1.23959 0.3475 0.3041 1.91 100 98.0 30.7 1.9 77 1PJI 49154 48727 0.0 0.0 0.062 1 16.5 2.5 99.2 1.90 1.97 1.0 0.53 1 2.0 99.0 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS version 1.1 Crystal structure of wild type Lactococcus lactis FPG complexed to a 1,3 propanediol containing DNA 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N 6 N N 6 N N 6 N N the biological assembly corresponds to one FPG and one DNA duplex A GLU 2 C GLU 2 HELX_P A VAL 18 C VAL 18 1 1 17 A TYR 29 C TYR 29 HELX_P A VAL 33 C VAL 33 5 2 5 A GLY 36 C GLY 36 HELX_P A THR 45 C THR 45 1 3 10 A GLN 121 C GLN 121 HELX_P A LYS 130 C LYS 130 1 4 10 A ASP 141 C ASP 141 HELX_P A SER 152 C SER 152 1 5 12 A LYS 155 C LYS 155 HELX_P A GLU 162 C GLU 162 1 6 8 A GLY 170 C GLY 170 HELX_P A ALA 181 C ALA 181 1 7 12 A GLU 188 C GLU 188 HELX_P A LEU 192 C LEU 192 5 8 5 A ILE 193 C ILE 193 HELX_P A LEU 214 C LEU 214 1 9 22 A LYS 230 C LYS 230 HELX_P A LEU 235 C LEU 235 5 10 6 covale 1.601 one D DT 6 A O3' DT 6 1_555 D PDI 7 A P PDI 7 1_555 covale 1.594 one D PDI 7 A OG PDI 7 1_555 D DT 8 A P DT 8 1_555 metalc 2.423 A CYS 245 C SG CYS 245 1_555 A ZN 300 D ZN ZN 1_555 metalc 2.497 A CYS 248 C SG CYS 248 1_555 A ZN 300 D ZN ZN 1_555 metalc 2.181 A CYS 265 C SG CYS 265 1_555 A ZN 300 D ZN ZN 1_555 metalc 2.406 A CYS 268 C SG CYS 268 1_555 A ZN 300 D ZN ZN 1_555 hydrog WATSON-CRICK D DT 2 A N3 DT 2 1_555 E DA 28 B N1 DA 14 1_555 hydrog WATSON-CRICK D DT 2 A O4 DT 2 1_555 E DA 28 B N6 DA 14 1_555 hydrog WATSON-CRICK D DC 3 A N3 DC 3 1_555 E DG 27 B N1 DG 13 1_555 hydrog WATSON-CRICK D DC 3 A N4 DC 3 1_555 E DG 27 B O6 DG 13 1_555 hydrog WATSON-CRICK D DC 3 A O2 DC 3 1_555 E DG 27 B N2 DG 13 1_555 hydrog WATSON-CRICK D DT 4 A N3 DT 4 1_555 E DA 26 B N1 DA 12 1_555 hydrog WATSON-CRICK D DT 4 A O4 DT 4 1_555 E DA 26 B N6 DA 12 1_555 hydrog WATSON-CRICK D DT 5 A N3 DT 5 1_555 E DA 25 B N1 DA 11 1_555 hydrog WATSON-CRICK D DT 5 A O4 DT 5 1_555 E DA 25 B N6 DA 11 1_555 hydrog WATSON-CRICK D DT 6 A N3 DT 6 1_555 E DA 24 B N1 DA 10 1_555 hydrog WATSON-CRICK D DT 6 A O4 DT 6 1_555 E DA 24 B N6 DA 10 1_555 hydrog WATSON-CRICK D DT 8 A N3 DT 8 1_555 E DA 22 B N1 DA 8 1_555 hydrog WATSON-CRICK D DT 8 A O4 DT 8 1_555 E DA 22 B N6 DA 8 1_555 hydrog WATSON-CRICK D DT 9 A N3 DT 9 1_555 E DA 21 B N1 DA 7 1_555 hydrog WATSON-CRICK D DT 9 A O4 DT 9 1_555 E DA 21 B N6 DA 7 1_555 hydrog WATSON-CRICK D DT 10 A N3 DT 10 1_555 E DA 20 B N1 DA 6 1_555 hydrog WATSON-CRICK D DT 10 A O4 DT 10 1_555 E DA 20 B N6 DA 6 1_555 hydrog WATSON-CRICK D DC 11 A N3 DC 11 1_555 E DG 19 B N1 DG 5 1_555 hydrog WATSON-CRICK D DC 11 A N4 DC 11 1_555 E DG 19 B O6 DG 5 1_555 hydrog WATSON-CRICK D DC 11 A O2 DC 11 1_555 E DG 19 B N2 DG 5 1_555 hydrog WATSON-CRICK D DT 12 A N3 DT 12 1_555 E DA 18 B N1 DA 4 1_555 hydrog WATSON-CRICK D DT 12 A O4 DT 12 1_555 E DA 18 B N6 DA 4 1_555 hydrog WATSON-CRICK D DC 13 A N3 DC 13 1_555 E DG 17 B N1 DG 3 1_555 hydrog WATSON-CRICK D DC 13 A N4 DC 13 1_555 E DG 17 B O6 DG 3 1_555 hydrog WATSON-CRICK D DC 13 A O2 DC 13 1_555 E DG 17 B N2 DG 3 1_555 hydrog WATSON-CRICK D DG 14 A N1 DG 14 1_555 E DC 16 B N3 DC 2 1_555 hydrog WATSON-CRICK D DG 14 A N2 DG 14 1_555 E DC 16 B O2 DC 2 1_555 hydrog WATSON-CRICK D DG 14 A O6 DG 14 1_555 E DC 16 B N4 DC 2 1_555 Hydrolase/DNA DNA repair, FPG, MutM, Abasic site, Hydrolase-DNA COMPLEX FPG_LACLC UNP 3 2 P42371 PELPEVETVRRELEKRIVGQKIISIEATYPRMVLTGFEQLKKELTGKTIQGISRRGKYLIFEIGDDFRLISHLRMEGKYR LATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEPTYDEDFDEKLFREKLRKSTKKIKPY LLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGG-SSIRTYSALGSTGKMQNELQVY GKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQK 1PJI PDB 1 1PJI 1PJI PDB 2 1PJI 2 273 1PJI 1 271 P42371 A 1 1 271 1 14 1PJI 1 14 1PJI D 2 1 14 15 28 1PJI 15 28 1PJI E 3 1 14 1 ASP SEE REMARK 999 1PJI A P42371 UNP 139 4 4 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 24 C SER 24 A ALA 27 C ALA 27 A ASP 92 C ASP 92 A PHE 98 C PHE 98 A GLY 101 C GLY 101 A ALA 106 C ALA 106 A LYS 78 C LYS 78 A ALA 82 C ALA 82 A ILE 49 C ILE 49 A ARG 55 C ARG 55 A TYR 58 C TYR 58 A ILE 63 C ILE 63 A PHE 67 C PHE 67 A HIS 72 C HIS 72 A THR 113 C THR 113 A SER 118 C SER 118 A GLN 253 C GLN 253 A VAL 257 C VAL 257 A ARG 260 C ARG 260 A PHE 264 C PHE 264 BINDING SITE FOR RESIDUE ZN A 300 A ZN 300 Software 4 BINDING SITE FOR RESIDUE GOL A 1001 A GOL 1001 Software 11 BINDING SITE FOR RESIDUE GOL A 1002 A GOL 1002 Software 7 BINDING SITE FOR RESIDUE GOL A 1003 A GOL 1003 Software 8 BINDING SITE FOR RESIDUE GOL A 1004 A GOL 1004 Software 10 A CYS 245 C CYS 245 4 1_555 A CYS 248 C CYS 248 4 1_555 A CYS 265 C CYS 265 4 1_555 A CYS 268 C CYS 268 4 1_555 A TYR 58 C TYR 58 11 1_555 A HIS 72 C HIS 72 11 1_555 A ARG 74 C ARG 74 11 1_555 A THR 113 C THR 113 11 1_555 A GLU 115 C GLU 115 11 1_555 A TYR 125 C TYR 125 11 1_555 A LYS 129 C LYS 129 11 1_555 A GOL 1002 F GOL 11 1_555 A HOH 1063 K HOH 11 1_555 D DT 9 A DT 9 11 1_555 D DT 10 A DT 10 11 1_555 A ARG 74 C ARG 74 7 1_555 A CYS 248 C CYS 248 7 6_555 A GOL 1001 E GOL 7 1_555 A HOH 1093 K HOH 7 1_555 A HOH 1165 K HOH 7 1_555 D DT 10 A DT 10 7 1_555 E HOH 61 J HOH 7 1_555 A ARG 16 C ARG 16 8 1_555 A GLN 20 C GLN 20 8 1_555 A LEU 81 C LEU 81 8 1_555 A THR 83 C THR 83 8 8_555 A ASP 85 C ASP 85 8 8_555 A PHE 98 C PHE 98 8 1_555 A ASP 100 C ASP 100 8 1_555 A GLY 101 C GLY 101 8 1_555 A GLY 259 C GLY 259 10 1_555 A ARG 260 C ARG 260 10 1_555 A HOH 1082 K HOH 10 1_555 A HOH 1182 K HOH 10 1_555 D DT 6 A DT 6 10 1_555 D DT 8 A DT 8 10 1_555 D DT 9 A DT 9 10 1_555 D HOH 18 I HOH 10 1_555 E DA 20 B DA 6 10 1_555 E DA 21 B DA 7 10 1_555 92 P 41 21 2