0.031143 0.000000 0.000000 0.000000 0.020371 0.000000 0.000000 0.000000 0.020247 0.00000 0.00000 0.00000 CIS PROLINE - PRO 30 Tulinsky, A. Mulichak, A.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 32.110 49.090 49.390 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 30 10576 10588 10.1021/bi00107a029 1657148 Crystal and molecular structure of human plasminogen kringle 4 refined at 1.9-A resolution. 1991 UK J.Mol.Biol. JMOBAK 0070 0022-2836 220 481 Structure of Bovine Prothrombin Fragment 1 Refined at 2.25 Angstroms Resolution 1991 UK Blood Coagulation Fibrinolysis BLFIE7 0796 0957-5235 1 673 Structure of the Lysine-Fibrin Binding Subsite of Human Plasminogen Kringle 4 1990 US Proteins PSFGEY 0867 0887-3585 3 85 Lysine(Slash)Fibrin Binding Sites of Kringles Modeled After the Structure of Kringle 1 of Prothrombin 1988 UK J.Mol.Biol. JMOBAK 0070 0022-2836 202 885 Structure of Prothrombin Fragment 1 Refined at 2.8 Angstroms Resolution 1988 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 9040.982 PLASMINOGEN KRINGLE 4 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 96 nat water no no DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKC DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKC A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens 2.15 42.83 pdbx_database_status struct_conf repository Initial release Version format compliance Version format compliance Derived calculations Other 1 0 1993-10-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 _pdbx_database_status.process_site Y BNL 1991-07-18 REL SO4 SULFATE ION HOH water SO4 100 2 SO4 SO4 100 A HOH 1 3 HOH HOH 101 A HOH 2 3 HOH HOH 102 A HOH 3 3 HOH HOH 103 A HOH 4 3 HOH HOH 104 A HOH 5 3 HOH HOH 105 A HOH 6 3 HOH HOH 106 A HOH 7 3 HOH HOH 107 A HOH 8 3 HOH HOH 108 A HOH 9 3 HOH HOH 109 A HOH 10 3 HOH HOH 110 A HOH 11 3 HOH HOH 111 A HOH 12 3 HOH HOH 112 A HOH 13 3 HOH HOH 113 A HOH 14 3 HOH HOH 114 A HOH 15 3 HOH HOH 115 A HOH 16 3 HOH HOH 116 A HOH 17 3 HOH HOH 117 A HOH 18 3 HOH HOH 118 A HOH 19 3 HOH HOH 119 A HOH 20 3 HOH HOH 120 A HOH 21 3 HOH HOH 121 A HOH 22 3 HOH HOH 122 A HOH 23 3 HOH HOH 123 A HOH 24 3 HOH HOH 124 A HOH 25 3 HOH HOH 125 A HOH 26 3 HOH HOH 126 A HOH 27 3 HOH HOH 127 A HOH 28 3 HOH HOH 128 A HOH 29 3 HOH HOH 129 A HOH 30 3 HOH HOH 130 A HOH 31 3 HOH HOH 131 A HOH 32 3 HOH HOH 132 A HOH 33 3 HOH HOH 133 A HOH 34 3 HOH HOH 134 A HOH 35 3 HOH HOH 135 A HOH 36 3 HOH HOH 136 A HOH 37 3 HOH HOH 137 A HOH 38 3 HOH HOH 138 A HOH 39 3 HOH HOH 139 A HOH 40 3 HOH HOH 140 A HOH 41 3 HOH HOH 141 A HOH 42 3 HOH HOH 142 A HOH 43 3 HOH HOH 143 A HOH 44 3 HOH HOH 144 A HOH 45 3 HOH HOH 145 A HOH 46 3 HOH HOH 146 A HOH 47 3 HOH HOH 147 A HOH 48 3 HOH HOH 148 A HOH 49 3 HOH HOH 149 A HOH 50 3 HOH HOH 150 A HOH 51 3 HOH HOH 151 A HOH 52 3 HOH HOH 152 A HOH 53 3 HOH HOH 153 A HOH 54 3 HOH HOH 154 A HOH 55 3 HOH HOH 155 A HOH 56 3 HOH HOH 156 A HOH 57 3 HOH HOH 157 A HOH 58 3 HOH HOH 158 A HOH 59 3 HOH HOH 159 A HOH 60 3 HOH HOH 160 A HOH 61 3 HOH HOH 161 A HOH 62 3 HOH HOH 162 A HOH 63 3 HOH HOH 163 A HOH 64 3 HOH HOH 164 A HOH 65 3 HOH HOH 165 A HOH 66 3 HOH HOH 166 A HOH 67 3 HOH HOH 167 A HOH 68 3 HOH HOH 168 A HOH 69 3 HOH HOH 169 A HOH 70 3 HOH HOH 170 A HOH 71 3 HOH HOH 171 A HOH 72 3 HOH HOH 172 A HOH 73 3 HOH HOH 173 A HOH 74 3 HOH HOH 174 A HOH 75 3 HOH HOH 175 A HOH 76 3 HOH HOH 176 A HOH 77 3 HOH HOH 177 A HOH 78 3 HOH HOH 178 A HOH 79 3 HOH HOH 179 A HOH 80 3 HOH HOH 180 A HOH 81 3 HOH HOH 181 A HOH 82 3 HOH HOH 182 A HOH 83 3 HOH HOH 183 A HOH 84 3 HOH HOH 184 A HOH 85 3 HOH HOH 185 A HOH 86 3 HOH HOH 186 A HOH 87 3 HOH HOH 187 A HOH 88 3 HOH HOH 188 A HOH 89 3 HOH HOH 189 A HOH 90 3 HOH HOH 190 A HOH 91 3 HOH HOH 191 A HOH 92 3 HOH HOH 192 A HOH 93 3 HOH HOH 193 A HOH 94 3 HOH HOH 194 A HOH 95 3 HOH HOH 195 A HOH 96 3 HOH HOH 196 A ASP 0 n 1 ASP 0 A CYS 1 n 2 CYS 1 A TYR 2 n 3 TYR 2 A HIS 3 n 4 HIS 3 A GLY 4 n 5 GLY 4 A ASP 5 n 6 ASP 5 A GLY 6 n 7 GLY 6 A GLN 7 n 8 GLN 7 A SER 8 n 9 SER 8 A TYR 9 n 10 TYR 9 A ARG 10 n 11 ARG 10 A GLY 11 n 12 GLY 11 A THR 12 n 13 THR 12 A SER 13 n 14 SER 13 A SER 14 n 15 SER 14 A THR 15 n 16 THR 15 A THR 16 n 17 THR 16 A THR 17 n 18 THR 17 A THR 18 n 19 THR 18 A GLY 19 n 20 GLY 19 A LYS 20 n 21 LYS 20 A LYS 21 n 22 LYS 21 A CYS 22 n 23 CYS 22 A GLN 23 n 24 GLN 23 A SER 24 n 25 SER 24 A TRP 25 n 26 TRP 25 A SER 26 n 27 SER 26 A SER 27 n 28 SER 27 A MET 28 n 29 MET 28 A THR 29 n 30 THR 29 A PRO 30 n 31 PRO 30 A HIS 31 n 32 HIS 31 A ARG 32 n 33 ARG 32 A HIS 33 n 34 HIS 33 A GLN 34 n 35 GLN 34 A LYS 35 n 36 LYS 35 A THR 37 n 37 THR 37 A PRO 38 n 38 PRO 38 A GLU 39 n 39 GLU 39 A ASN 40 n 40 ASN 40 A TYR 41 n 41 TYR 41 A PRO 42 n 42 PRO 42 A ASN 43 n 43 ASN 43 A ALA 44 n 44 ALA 44 A GLY 45 n 45 GLY 45 A LEU 46 n 46 LEU 46 A THR 47 n 47 THR 47 A MET 48 n 48 MET 48 A ASN 49 n 49 ASN 49 A TYR 50 n 50 TYR 50 A CYS 51 n 51 CYS 51 A ARG 52 n 52 ARG 52 A ASN 53 n 53 ASN 53 A PRO 54 n 54 PRO 54 A ASP 55 n 55 ASP 55 A ALA 56 n 56 ALA 56 A ASP 57 n 57 ASP 57 A LYS 58 n 58 LYS 58 A GLY 60 n 59 GLY 60 A PRO 61 n 60 PRO 61 A TRP 62 n 61 TRP 62 A CYS 63 n 62 CYS 63 A PHE 64 n 63 PHE 64 A THR 65 n 64 THR 65 A THR 66 n 65 THR 66 A ASP 67 n 66 ASP 67 A PRO 68 n 67 PRO 68 A SER 69 n 68 SER 69 A VAL 70 n 69 VAL 70 A ARG 71 n 70 ARG 71 A TRP 72 n 71 TRP 72 A GLU 73 n 72 GLU 73 A TYR 74 n 73 TYR 74 A CYS 75 n 74 CYS 75 A ASN 76 n 75 ASN 76 A LEU 77 n 76 LEU 77 A LYS 78 n 77 LYS 78 A LYS 79 n 78 LYS 79 A CYS 80 n 79 CYS 80 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CB ASP 0 A CB ASP 1 1 Y 1 A CG ASP 0 A CG ASP 1 1 Y 1 A OD1 ASP 0 A OD1 ASP 1 1 Y 1 A OD2 ASP 0 A OD2 ASP 1 1 Y 1 A OG1 THR 12 A OG1 THR 13 1 Y 1 A CG2 THR 12 A CG2 THR 13 1 Y 1 A CG GLU 39 A CG GLU 39 1 Y 1 A CD GLU 39 A CD GLU 39 1 Y 1 A OE1 GLU 39 A OE1 GLU 39 1 Y 1 A OE2 GLU 39 A OE2 GLU 39 1 Y 1 A CB LYS 78 A CB LYS 77 1 Y 1 A CG LYS 78 A CG LYS 77 1 Y 1 A CD LYS 78 A CD LYS 77 1 Y 1 A CE LYS 78 A CE LYS 77 1 Y 1 A NZ LYS 78 A NZ LYS 77 1 Y 1 A CG LYS 79 A CG LYS 78 1 Y 1 A CD LYS 79 A CD LYS 78 1 Y 1 A CE LYS 79 A CE LYS 78 1 Y 1 A NZ LYS 79 A NZ LYS 78 1 Y 1 -4.69 0.60 121.00 116.31 A A A CB CG CD2 TYR TYR TYR 9 9 9 N 1 -12.99 1.90 110.30 97.31 A A A N CA CB THR THR THR 17 17 17 N 1 14.24 2.30 110.00 124.24 A A A OG1 CB CG2 THR THR THR 17 17 17 N 1 9.87 1.40 123.60 133.47 A A A CD NE CZ ARG ARG ARG 32 32 32 N 1 5.79 0.90 118.30 124.09 A A A CB CG OD1 ASP ASP ASP 67 67 67 N 1 A SER 14 -152.14 33.55 1 A LEU 46 -68.78 82.01 1 A MET 48 43.60 -129.66 0.142 1.9 1 1.9 96 711 5 0 610 0.018 refinement PROFFT PLASMINOGEN KRINGLE 4 CRYSTAL AND MOLECULAR STRUCTURE OF HUMAN PLASMINOGEN KRINGLE 4 REFINED AT 1.9-ANGSTROMS RESOLUTION 1 N N 2 N N 3 N N disulf 2.067 A CYS 1 A SG CYS 2 1_555 A CYS 80 A SG CYS 79 1_555 disulf 1.983 A CYS 22 A SG CYS 23 1_555 A CYS 63 A SG CYS 62 1_555 disulf 1.970 A CYS 51 A SG CYS 51 1_555 A CYS 75 A SG CYS 74 1_555 HYDROLASE(SERINE PROTEASE) HYDROLASE(SERINE PROTEASE) A THR 29 A THR 30 1 A PRO 30 A PRO 31 3.85 PLMN_HUMAN UNP 1 1 P00747 MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFTCRAFQYHSKEQQCVIMAENR KSSIIIRMRDVVLFEKKVYLSECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQ GPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRE LRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLD ENYCRNPDGKRAPWCHTTNSQVRWEYCKIPSCDSSPVSTEQLAPTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQS WSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKCSGTEASVVAPPPVVLLPDVETPSEED CMFGNGKGYRGKRATTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQC AAPSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAH QEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQ LPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFV TWIEGVMRNN 376 454 1PK4 0 80 P00747 A 1 1 79 2 2 2 anti-parallel anti-parallel anti-parallel A SER 14 A SER 15 A THR 16 A THR 17 A LYS 20 A LYS 21 A CYS 22 A CYS 23 A LYS 21 A LYS 22 A GLN 23 A GLN 24 A PHE 64 A PHE 63 A THR 66 A THR 65 A PRO 61 A PRO 60 A THR 65 A THR 64 A ARG 71 A ARG 70 A CYS 75 A CYS 74 BINDING SITE FOR RESIDUE SO4 A 100 Software 7 A ARG 32 A ARG 33 7 4_455 A LYS 35 A LYS 36 7 1_555 A LYS 58 A LYS 58 7 4_555 A PHE 64 A PHE 63 7 1_555 A ARG 71 A ARG 70 7 1_555 A HOH 111 C HOH 7 1_555 A HOH 137 C HOH 7 4_555 19 P 21 21 21