0.016863
0.009736
0.000000
0.000000
0.019472
0.000000
0.000000
0.000000
0.009107
0.00000
0.00000
0.00000
Ramakrishnan, V.
White, S.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
59.300
59.300
109.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
S
C
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
N
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
S
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
Y
238
N
C
Y
239
N
C
Y
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
S
C
N
258
N
C
N
259
N
O
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
O
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
R
C
N
292
N
O
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
Y
233
N
doub
Y
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
doub
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
UK
Nature
NATUAS
0006
0028-0836
358
768
771
10.1038/358768a0
1508272
The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA.
1992
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
204
447
Model for the Three-Dimensional Folding of 16S Ribosomal RNA
1988
NE
FEBS Lett.
FEBLAL
0165
0014-5793
163
73
Proteins of the Bacillus Stearothermophilus Ribosome: A 5A Structure Analysis of Protein S5
1983
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
258
13328
Proteins of the Bacillus Stearothermophilus Ribosome. Crystallization of Proteins L30 and S5
1983
GW
Mol.Gen.Genet.
MGGEAE
813
0026-8925
140
91
Effect of Different Mutations in Ribosomal Protein S5 of Escherichia Coli on Translational Fidelity
1975
GW
Mol.Gen.Genet.
MGGEAE
813
0026-8925
143
43
Genetic Position and Amino Acid Replacements of Several Mutations in Ribosomal Protein S5 from Escherichia Coli
1975
10.2210/pdb1pkp/pdb
pdb_00001pkp
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
15914.577
RIBOSOMAL PROTEIN S5
1
man
polymer
no
no
MRRINPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIVGTT
IPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRA
MRRINPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIVGTT
IPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Geobacillus
sample
BACILLUS STEAROTHERMOPHILUS
1422
Geobacillus stearothermophilus
BACILLUS STEAROTHERMOPHILUS
3.50
64.86
pdbx_database_status
struct_conf
struct_conf_type
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
Data collection
Database references
1
0
1994-01-31
1
1
2008-03-03
1
2
2011-07-13
1
3
2017-11-29
1
4
2024-02-14
_pdbx_database_status.process_site
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Y
BNL
1993-08-30
REL
n
1
1
A
n
2
2
A
n
3
3
A
ILE
4
n
4
ILE
4
A
ASN
5
n
5
ASN
5
A
PRO
6
n
6
PRO
6
A
ASN
7
n
7
ASN
7
A
LYS
8
n
8
LYS
8
A
LEU
9
n
9
LEU
9
A
GLU
10
n
10
GLU
10
A
LEU
11
n
11
LEU
11
A
GLU
12
n
12
GLU
12
A
GLU
13
n
13
GLU
13
A
ARG
14
n
14
ARG
14
A
VAL
15
n
15
VAL
15
A
VAL
16
n
16
VAL
16
A
ALA
17
n
17
ALA
17
A
VAL
18
n
18
VAL
18
A
ASN
19
n
19
ASN
19
A
ARG
20
n
20
ARG
20
A
VAL
21
n
21
VAL
21
A
ALA
22
n
22
ALA
22
A
LYS
23
n
23
LYS
23
A
VAL
24
n
24
VAL
24
A
VAL
25
n
25
VAL
25
A
LYS
26
n
26
LYS
26
A
GLY
27
n
27
GLY
27
A
GLY
28
n
28
GLY
28
A
ARG
29
n
29
ARG
29
A
ARG
30
n
30
ARG
30
A
LEU
31
n
31
LEU
31
A
ARG
32
n
32
ARG
32
A
PHE
33
n
33
PHE
33
A
SER
34
n
34
SER
34
A
ALA
35
n
35
ALA
35
A
LEU
36
n
36
LEU
36
A
VAL
37
n
37
VAL
37
A
VAL
38
n
38
VAL
38
A
VAL
39
n
39
VAL
39
A
GLY
40
n
40
GLY
40
A
ASP
41
n
41
ASP
41
A
LYS
42
n
42
LYS
42
A
ASN
43
n
43
ASN
43
A
GLY
44
n
44
GLY
44
A
HIS
45
n
45
HIS
45
A
VAL
46
n
46
VAL
46
A
GLY
47
n
47
GLY
47
A
PHE
48
n
48
PHE
48
A
GLY
49
n
49
GLY
49
A
THR
50
n
50
THR
50
A
GLY
51
n
51
GLY
51
A
LYS
52
n
52
LYS
52
A
ALA
53
n
53
ALA
53
A
GLN
54
n
54
GLN
54
A
GLU
55
n
55
GLU
55
A
VAL
56
n
56
VAL
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
ILE
60
n
60
ILE
60
A
ARG
61
n
61
ARG
61
A
LYS
62
n
62
LYS
62
A
ALA
63
n
63
ALA
63
A
ILE
64
n
64
ILE
64
A
GLU
65
n
65
GLU
65
A
ASP
66
n
66
ASP
66
A
ALA
67
n
67
ALA
67
A
LYS
68
n
68
LYS
68
A
LYS
69
n
69
LYS
69
A
ASN
70
n
70
ASN
70
A
LEU
71
n
71
LEU
71
A
ILE
72
n
72
ILE
72
A
GLU
73
n
73
GLU
73
A
VAL
74
n
74
VAL
74
A
PRO
75
n
75
PRO
75
A
ILE
76
n
76
ILE
76
A
VAL
77
n
77
VAL
77
A
GLY
78
n
78
GLY
78
A
THR
79
n
79
THR
79
A
THR
80
n
80
THR
80
A
ILE
81
n
81
ILE
81
A
PRO
82
n
82
PRO
82
A
HIS
83
n
83
HIS
83
A
GLU
84
n
84
GLU
84
A
VAL
85
n
85
VAL
85
A
ILE
86
n
86
ILE
86
A
GLY
87
n
87
GLY
87
A
HIS
88
n
88
HIS
88
A
PHE
89
n
89
PHE
89
A
GLY
90
n
90
GLY
90
A
ALA
91
n
91
ALA
91
A
GLY
92
n
92
GLY
92
A
GLU
93
n
93
GLU
93
A
ILE
94
n
94
ILE
94
A
ILE
95
n
95
ILE
95
A
LEU
96
n
96
LEU
96
A
LYS
97
n
97
LYS
97
A
PRO
98
n
98
PRO
98
A
ALA
99
n
99
ALA
99
A
SER
100
n
100
SER
100
A
GLU
101
n
101
GLU
101
A
GLY
102
n
102
GLY
102
A
THR
103
n
103
THR
103
A
GLY
104
n
104
GLY
104
A
VAL
105
n
105
VAL
105
A
ILE
106
n
106
ILE
106
A
ALA
107
n
107
ALA
107
A
GLY
108
n
108
GLY
108
A
GLY
109
n
109
GLY
109
A
PRO
110
n
110
PRO
110
A
ALA
111
n
111
ALA
111
A
ARG
112
n
112
ARG
112
A
ALA
113
n
113
ALA
113
A
VAL
114
n
114
VAL
114
A
LEU
115
n
115
LEU
115
A
GLU
116
n
116
GLU
116
A
LEU
117
n
117
LEU
117
A
ALA
118
n
118
ALA
118
A
GLY
119
n
119
GLY
119
A
ILE
120
n
120
ILE
120
A
SER
121
n
121
SER
121
A
ASP
122
n
122
ASP
122
A
ILE
123
n
123
ILE
123
A
LEU
124
n
124
LEU
124
A
SER
125
n
125
SER
125
A
LYS
126
n
126
LYS
126
A
SER
127
n
127
SER
127
A
ILE
128
n
128
ILE
128
A
GLY
129
n
129
GLY
129
A
SER
130
n
130
SER
130
A
ASN
131
n
131
ASN
131
A
THR
132
n
132
THR
132
A
PRO
133
n
133
PRO
133
A
ILE
134
n
134
ILE
134
A
ASN
135
n
135
ASN
135
A
MET
136
n
136
MET
136
A
VAL
137
n
137
VAL
137
A
ARG
138
n
138
ARG
138
A
ALA
139
n
139
ALA
139
A
THR
140
n
140
THR
140
A
PHE
141
n
141
PHE
141
A
ASP
142
n
142
ASP
142
A
GLY
143
n
143
GLY
143
A
LEU
144
n
144
LEU
144
A
LYS
145
n
145
LYS
145
A
GLN
146
n
146
GLN
146
A
LEU
147
n
147
LEU
147
A
LYS
148
n
148
LYS
148
A
n
149
149
A
n
150
150
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_555
x-y,-y,-z+1/3
crystal symmetry operation
0.0000000000
0.0000000000
36.6000000000
A
O
GLU
12
A
O
GLU
12
A
N
GLY
40
A
N
GLY
40
A
O
VAL
39
A
O
VAL
39
A
N
GLY
47
A
N
GLY
47
A
O
VAL
85
A
O
VAL
85
A
N
LEU
96
A
N
LEU
96
A
O
ILE
95
A
O
ILE
95
A
N
LYS
126
A
N
LYS
126
1
A
MET
1
A
MET
1
1
Y
1
A
ARG
2
A
ARG
2
1
Y
1
A
ARG
3
A
ARG
3
1
Y
1
A
ARG
149
A
ARG
149
1
Y
1
A
ALA
150
A
ALA
150
1
Y
1
4.04
0.50
120.30
124.34
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
20
20
20
N
1
-3.60
0.50
120.30
116.70
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
20
20
20
N
1
21.77
2.70
111.00
132.77
A
A
A
N
CA
C
ARG
ARG
ARG
20
20
20
N
1
-13.61
2.20
117.20
103.59
A
A
A
CA
C
N
ARG
ARG
VAL
20
20
21
Y
1
-13.56
2.20
113.40
99.84
A
A
A
CA
CB
CG
LYS
LYS
LYS
26
26
26
N
1
3.27
0.50
120.30
123.57
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
29
29
29
N
1
20.36
2.70
111.00
131.36
A
A
A
N
CA
C
ARG
ARG
ARG
30
30
30
N
1
-11.86
1.90
111.40
99.54
A
A
A
CB
CA
C
VAL
VAL
VAL
46
46
46
N
1
3.42
0.50
120.30
123.72
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
61
61
61
N
1
4.38
0.50
120.30
124.68
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
112
112
112
N
1
7.24
0.50
120.30
127.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
138
138
138
N
1
-3.92
0.50
120.30
116.38
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
138
138
138
N
1
A
ARG
20
99.01
118.22
1
A
VAL
21
175.86
-103.16
1
A
LYS
23
26.59
-70.80
1
A
LYS
26
63.08
-3.40
1
A
ARG
30
97.37
86.17
1
A
LEU
31
117.92
-66.89
1
A
LYS
42
55.01
16.95
0.2200000
0.2200000
2.8
6.0
1
0.0
2.8
6.0
0
1071
0
0
1071
0.017
3.74
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
THE STRUCTURE OF RIBOSOMAL PROTEIN S5 REVEALS SITES OF INTERACTION WITH 16S RRNA
1
N
N
A
GLU
55
A
GLU
55
HELX_P
A
LYS
69
A
LYS
69
1
H1
15
A
GLY
109
A
GLY
109
HELX_P
A
ALA
118
A
ALA
118
1
H2
10
A
THR
132
A
THR
132
HELX_P
A
GLN
146
A
GLN
146
1
H3
15
RIBOSOMAL PROTEIN
RIBOSOMAL PROTEIN
RS5_BACST
UNP
1
1
P02357
MRRINPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLIEVPIVGTT
IPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATFDGLKQLKRAEDVAKLRGKT
VEELLG
1
150
1PKP
1
150
P02357
A
1
1
150
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
10
A
GLU
10
A
ARG
20
A
ARG
20
A
ARG
32
A
ARG
32
A
GLY
40
A
GLY
40
A
HIS
45
A
HIS
45
A
ALA
53
A
ALA
53
A
HIS
83
A
HIS
83
A
PHE
89
A
PHE
89
A
GLY
92
A
GLY
92
A
PRO
98
A
PRO
98
A
ILE
123
A
ILE
123
A
SER
127
A
SER
127
PROPOSED SITES FOR INTERACTION WITH 16S R-RNA
Author
13
PROPOSED SITES FOR INTERACTION WITH 16S R-RNA
Author
2
A
ARG
20
A
ARG
20
13
1_555
A
VAL
21
A
VAL
21
13
1_555
A
ALA
22
A
ALA
22
13
1_555
A
LYS
23
A
LYS
23
13
1_555
A
VAL
24
A
VAL
24
13
1_555
A
VAL
25
A
VAL
25
13
1_555
A
LYS
26
A
LYS
26
13
1_555
A
GLY
27
A
GLY
27
13
1_555
A
GLY
28
A
GLY
28
13
1_555
A
ARG
29
A
ARG
29
13
1_555
A
ARG
30
A
ARG
30
13
1_555
A
LEU
31
A
LEU
31
13
1_555
A
ARG
32
A
ARG
32
13
1_555
A
GLY
104
A
GLY
104
2
1_555
A
ARG
112
A
ARG
112
2
1_555
154
P 32 2 1