0.013774
0.000000
0.000000
0.000000
0.012407
0.000000
0.000000
0.000000
0.010449
0.00000
0.00000
0.00000
Yoder, M.D.
Jurnak, F.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
72.600
80.600
95.700
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
Lu 3
174.967
LUTETIUM (III) ION
LU
non-polymer
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
LU
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
N
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
S
N
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
N
N
249
S
C
N
250
N
C
N
251
N
O
N
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
N
276
N
C
N
277
N
C
N
278
N
O
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
N
293
N
O
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
R
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
N
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
N
357
N
O
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
N
375
N
C
N
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
US
Plant Physiol.
PLPHAY
0765
0032-0889
107
349
364
12228363
The Refined Three-Dimensional Structure of Pectate Lyase C from Erwinia chrysanthemi at 2.2 Angstrom Resolution (Implications for an Enzymatic Mechanism).
1995
10.2210/pdb1plu/pdb
pdb_00001plu
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
291
1
COLLIMATOR
AREA DETECTOR
1992-06
SDMS
GRAPHIC CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU300
37733.605
PROTEIN (PECTATE LYASE C)
4.2.2.2
1
nat
polymer
174.967
LUTETIUM (III) ION
1
syn
non-polymer
PELC
no
no
ATDTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPR
GVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD
NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGS
GLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVLKGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAY
NYSPVSAQCVKDKLPGYAGVGKNLATLTSTACK
ATDTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPR
GVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD
NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGS
GLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVLKGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAY
NYSPVSAQCVKDKLPGYAGVGKNLATLTSTACK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Dickeya
sample
EXTRACELLULAR
556
Erwinia chrysanthemi
HB101
EC16
1
3.71
66.84
6.9
PROTEIN WAS CRYSTALLIZED FROM 1.0MM LUCL3, 1.0M AMMONIUM SULFATE, AND 50MM
HEPES, PH 6.9
software
chem_comp_atom
chem_comp_bond
database_2
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
1999-07-13
1
1
2007-10-16
1
2
2011-07-13
1
3
2017-10-04
1
4
2023-12-27
1
5
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
RCSB
1999-06-04
REL
LU
LUTETIUM (III) ION
SEQ. IN SWISS-PROT IS PRECURSOR. C-TERM LYS WAS DISORDERED.
PREVIOUS PELC MODEL
Other
experimental model
LU
700
2
LU
LU
700
A
ALA
1
n
1
ALA
1
A
THR
2
n
2
THR
2
A
ASP
3
n
3
ASP
3
A
THR
4
n
4
THR
4
A
GLY
5
n
5
GLY
5
A
GLY
6
n
6
GLY
6
A
TYR
7
n
7
TYR
7
A
ALA
8
n
8
ALA
8
A
ALA
9
n
9
ALA
9
A
THR
10
n
10
THR
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
GLY
13
n
13
GLY
13
A
ASN
14
n
14
ASN
14
A
VAL
15
n
15
VAL
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
SER
20
n
20
SER
20
A
LYS
21
n
21
LYS
21
A
THR
22
n
22
THR
22
A
ALA
23
n
23
ALA
23
A
THR
24
n
24
THR
24
A
SER
25
n
25
SER
25
A
MET
26
n
26
MET
26
A
GLN
27
n
27
GLN
27
A
ASP
28
n
28
ASP
28
A
ILE
29
n
29
ILE
29
A
VAL
30
n
30
VAL
30
A
ASN
31
n
31
ASN
31
A
ILE
32
n
32
ILE
32
A
ILE
33
n
33
ILE
33
A
ASP
34
n
34
ASP
34
A
ALA
35
n
35
ALA
35
A
ALA
36
n
36
ALA
36
A
ARG
37
n
37
ARG
37
A
LEU
38
n
38
LEU
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
ASN
41
n
41
ASN
41
A
GLY
42
n
42
GLY
42
A
LYS
43
n
43
LYS
43
A
LYS
44
n
44
LYS
44
A
VAL
45
n
45
VAL
45
A
LYS
46
n
46
LYS
46
A
GLY
47
n
47
GLY
47
A
GLY
48
n
48
GLY
48
A
ALA
49
n
49
ALA
49
A
TYR
50
n
50
TYR
50
A
PRO
51
n
51
PRO
51
A
LEU
52
n
52
LEU
52
A
VAL
53
n
53
VAL
53
A
ILE
54
n
54
ILE
54
A
THR
55
n
55
THR
55
A
TYR
56
n
56
TYR
56
A
THR
57
n
57
THR
57
A
GLY
58
n
58
GLY
58
A
ASN
59
n
59
ASN
59
A
GLU
60
n
60
GLU
60
A
ASP
61
n
61
ASP
61
A
SER
62
n
62
SER
62
A
LEU
63
n
63
LEU
63
A
ILE
64
n
64
ILE
64
A
ASN
65
n
65
ASN
65
A
ALA
66
n
66
ALA
66
A
ALA
67
n
67
ALA
67
A
ALA
68
n
68
ALA
68
A
ALA
69
n
69
ALA
69
A
ASN
70
n
70
ASN
70
A
ILE
71
n
71
ILE
71
A
CYS
72
n
72
CYS
72
A
GLY
73
n
73
GLY
73
A
GLN
74
n
74
GLN
74
A
TRP
75
n
75
TRP
75
A
SER
76
n
76
SER
76
A
LYS
77
n
77
LYS
77
A
ASP
78
n
78
ASP
78
A
PRO
79
n
79
PRO
79
A
ARG
80
n
80
ARG
80
A
GLY
81
n
81
GLY
81
A
VAL
82
n
82
VAL
82
A
GLU
83
n
83
GLU
83
A
ILE
84
n
84
ILE
84
A
LYS
85
n
85
LYS
85
A
GLU
86
n
86
GLU
86
A
PHE
87
n
87
PHE
87
A
THR
88
n
88
THR
88
A
LYS
89
n
89
LYS
89
A
GLY
90
n
90
GLY
90
A
ILE
91
n
91
ILE
91
A
THR
92
n
92
THR
92
A
ILE
93
n
93
ILE
93
A
ILE
94
n
94
ILE
94
A
GLY
95
n
95
GLY
95
A
ALA
96
n
96
ALA
96
A
ASN
97
n
97
ASN
97
A
GLY
98
n
98
GLY
98
A
SER
99
n
99
SER
99
A
SER
100
n
100
SER
100
A
ALA
101
n
101
ALA
101
A
ASN
102
n
102
ASN
102
A
PHE
103
n
103
PHE
103
A
GLY
104
n
104
GLY
104
A
ILE
105
n
105
ILE
105
A
TRP
106
n
106
TRP
106
A
ILE
107
n
107
ILE
107
A
LYS
108
n
108
LYS
108
A
LYS
109
n
109
LYS
109
A
SER
110
n
110
SER
110
A
SER
111
n
111
SER
111
A
ASP
112
n
112
ASP
112
A
VAL
113
n
113
VAL
113
A
VAL
114
n
114
VAL
114
A
VAL
115
n
115
VAL
115
A
GLN
116
n
116
GLN
116
A
ASN
117
n
117
ASN
117
A
MET
118
n
118
MET
118
A
ARG
119
n
119
ARG
119
A
ILE
120
n
120
ILE
120
A
GLY
121
n
121
GLY
121
A
TYR
122
n
122
TYR
122
A
LEU
123
n
123
LEU
123
A
PRO
124
n
124
PRO
124
A
GLY
125
n
125
GLY
125
A
GLY
126
n
126
GLY
126
A
ALA
127
n
127
ALA
127
A
LYS
128
n
128
LYS
128
A
ASP
129
n
129
ASP
129
A
GLY
130
n
130
GLY
130
A
ASP
131
n
131
ASP
131
A
MET
132
n
132
MET
132
A
ILE
133
n
133
ILE
133
A
ARG
134
n
134
ARG
134
A
VAL
135
n
135
VAL
135
A
ASP
136
n
136
ASP
136
A
ASP
137
n
137
ASP
137
A
SER
138
n
138
SER
138
A
PRO
139
n
139
PRO
139
A
ASN
140
n
140
ASN
140
A
VAL
141
n
141
VAL
141
A
TRP
142
n
142
TRP
142
A
VAL
143
n
143
VAL
143
A
ASP
144
n
144
ASP
144
A
HIS
145
n
145
HIS
145
A
ASN
146
n
146
ASN
146
A
GLU
147
n
147
GLU
147
A
LEU
148
n
148
LEU
148
A
PHE
149
n
149
PHE
149
A
ALA
150
n
150
ALA
150
A
ALA
151
n
151
ALA
151
A
ASN
152
n
152
ASN
152
A
HIS
153
n
153
HIS
153
A
GLU
154
n
154
GLU
154
A
CYS
155
n
155
CYS
155
A
ASP
156
n
156
ASP
156
A
GLY
157
n
157
GLY
157
A
THR
158
n
158
THR
158
A
PRO
159
n
159
PRO
159
A
ASP
160
n
160
ASP
160
A
ASN
161
n
161
ASN
161
A
ASP
162
n
162
ASP
162
A
THR
163
n
163
THR
163
A
THR
164
n
164
THR
164
A
PHE
165
n
165
PHE
165
A
GLU
166
n
166
GLU
166
A
SER
167
n
167
SER
167
A
ALA
168
n
168
ALA
168
A
VAL
169
n
169
VAL
169
A
ASP
170
n
170
ASP
170
A
ILE
171
n
171
ILE
171
A
LYS
172
n
172
LYS
172
A
GLY
173
n
173
GLY
173
A
ALA
174
n
174
ALA
174
A
SER
175
n
175
SER
175
A
ASN
176
n
176
ASN
176
A
THR
177
n
177
THR
177
A
VAL
178
n
178
VAL
178
A
THR
179
n
179
THR
179
A
VAL
180
n
180
VAL
180
A
SER
181
n
181
SER
181
A
TYR
182
n
182
TYR
182
A
ASN
183
n
183
ASN
183
A
TYR
184
n
184
TYR
184
A
ILE
185
n
185
ILE
185
A
HIS
186
n
186
HIS
186
A
GLY
187
n
187
GLY
187
A
VAL
188
n
188
VAL
188
A
LYS
189
n
189
LYS
189
A
LYS
190
n
190
LYS
190
A
VAL
191
n
191
VAL
191
A
GLY
192
n
192
GLY
192
A
LEU
193
n
193
LEU
193
A
ASP
194
n
194
ASP
194
A
GLY
195
n
195
GLY
195
A
SER
196
n
196
SER
196
A
SER
197
n
197
SER
197
A
SER
198
n
198
SER
198
A
SER
199
n
199
SER
199
A
ASP
200
n
200
ASP
200
A
THR
201
n
201
THR
201
A
GLY
202
n
202
GLY
202
A
ARG
203
n
203
ARG
203
A
ASN
204
n
204
ASN
204
A
ILE
205
n
205
ILE
205
A
THR
206
n
206
THR
206
A
TYR
207
n
207
TYR
207
A
HIS
208
n
208
HIS
208
A
HIS
209
n
209
HIS
209
A
ASN
210
n
210
ASN
210
A
TYR
211
n
211
TYR
211
A
TYR
212
n
212
TYR
212
A
ASN
213
n
213
ASN
213
A
ASP
214
n
214
ASP
214
A
VAL
215
n
215
VAL
215
A
ASN
216
n
216
ASN
216
A
ALA
217
n
217
ALA
217
A
ARG
218
n
218
ARG
218
A
LEU
219
n
219
LEU
219
A
PRO
220
n
220
PRO
220
A
LEU
221
n
221
LEU
221
A
GLN
222
n
222
GLN
222
A
ARG
223
n
223
ARG
223
A
GLY
224
n
224
GLY
224
A
GLY
225
n
225
GLY
225
A
LEU
226
n
226
LEU
226
A
VAL
227
n
227
VAL
227
A
HIS
228
n
228
HIS
228
A
ALA
229
n
229
ALA
229
A
TYR
230
n
230
TYR
230
A
ASN
231
n
231
ASN
231
A
ASN
232
n
232
ASN
232
A
LEU
233
n
233
LEU
233
A
TYR
234
n
234
TYR
234
A
THR
235
n
235
THR
235
A
ASN
236
n
236
ASN
236
A
ILE
237
n
237
ILE
237
A
THR
238
n
238
THR
238
A
GLY
239
n
239
GLY
239
A
SER
240
n
240
SER
240
A
GLY
241
n
241
GLY
241
A
LEU
242
n
242
LEU
242
A
ASN
243
n
243
ASN
243
A
VAL
244
n
244
VAL
244
A
ARG
245
n
245
ARG
245
A
GLN
246
n
246
GLN
246
A
ASN
247
n
247
ASN
247
A
GLY
248
n
248
GLY
248
A
GLN
249
n
249
GLN
249
A
ALA
250
n
250
ALA
250
A
LEU
251
n
251
LEU
251
A
ILE
252
n
252
ILE
252
A
GLU
253
n
253
GLU
253
A
ASN
254
n
254
ASN
254
A
ASN
255
n
255
ASN
255
A
TRP
256
n
256
TRP
256
A
PHE
257
n
257
PHE
257
A
GLU
258
n
258
GLU
258
A
LYS
259
n
259
LYS
259
A
ALA
260
n
260
ALA
260
A
ILE
261
n
261
ILE
261
A
ASN
262
n
262
ASN
262
A
PRO
263
n
263
PRO
263
A
VAL
264
n
264
VAL
264
A
THR
265
n
265
THR
265
A
SER
266
n
266
SER
266
A
ARG
267
n
267
ARG
267
A
TYR
268
n
268
TYR
268
A
ASP
269
n
269
ASP
269
A
GLY
270
n
270
GLY
270
A
LYS
271
n
271
LYS
271
A
ASN
272
n
272
ASN
272
A
PHE
273
n
273
PHE
273
A
GLY
274
n
274
GLY
274
A
THR
275
n
275
THR
275
A
TRP
276
n
276
TRP
276
A
VAL
277
n
277
VAL
277
A
LEU
278
n
278
LEU
278
A
LYS
279
n
279
LYS
279
A
GLY
280
n
280
GLY
280
A
ASN
281
n
281
ASN
281
A
ASN
282
n
282
ASN
282
A
ILE
283
n
283
ILE
283
A
THR
284
n
284
THR
284
A
LYS
285
n
285
LYS
285
A
PRO
286
n
286
PRO
286
A
ALA
287
n
287
ALA
287
A
ASP
288
n
288
ASP
288
A
PHE
289
n
289
PHE
289
A
SER
290
n
290
SER
290
A
THR
291
n
291
THR
291
A
TYR
292
n
292
TYR
292
A
SER
293
n
293
SER
293
A
ILE
294
n
294
ILE
294
A
THR
295
n
295
THR
295
A
TRP
296
n
296
TRP
296
A
THR
297
n
297
THR
297
A
ALA
298
n
298
ALA
298
A
ASP
299
n
299
ASP
299
A
THR
300
n
300
THR
300
A
LYS
301
n
301
LYS
301
A
PRO
302
n
302
PRO
302
A
TYR
303
n
303
TYR
303
A
VAL
304
n
304
VAL
304
A
ASN
305
n
305
ASN
305
A
ALA
306
n
306
ALA
306
A
ASP
307
n
307
ASP
307
A
SER
308
n
308
SER
308
A
TRP
309
n
309
TRP
309
A
THR
310
n
310
THR
310
A
SER
311
n
311
SER
311
A
THR
312
n
312
THR
312
A
GLY
313
n
313
GLY
313
A
THR
314
n
314
THR
314
A
PHE
315
n
315
PHE
315
A
PRO
316
n
316
PRO
316
A
THR
317
n
317
THR
317
A
VAL
318
n
318
VAL
318
A
ALA
319
n
319
ALA
319
A
TYR
320
n
320
TYR
320
A
ASN
321
n
321
ASN
321
A
TYR
322
n
322
TYR
322
A
SER
323
n
323
SER
323
A
PRO
324
n
324
PRO
324
A
VAL
325
n
325
VAL
325
A
SER
326
n
326
SER
326
A
ALA
327
n
327
ALA
327
A
GLN
328
n
328
GLN
328
A
CYS
329
n
329
CYS
329
A
VAL
330
n
330
VAL
330
A
LYS
331
n
331
LYS
331
A
ASP
332
n
332
ASP
332
A
LYS
333
n
333
LYS
333
A
LEU
334
n
334
LEU
334
A
PRO
335
n
335
PRO
335
A
GLY
336
n
336
GLY
336
A
TYR
337
n
337
TYR
337
A
ALA
338
n
338
ALA
338
A
GLY
339
n
339
GLY
339
A
VAL
340
n
340
VAL
340
A
GLY
341
n
341
GLY
341
A
LYS
342
n
342
LYS
342
A
ASN
343
n
343
ASN
343
A
LEU
344
n
344
LEU
344
A
ALA
345
n
345
ALA
345
A
THR
346
n
346
THR
346
A
LEU
347
n
347
LEU
347
A
THR
348
n
348
THR
348
A
SER
349
n
349
SER
349
A
THR
350
n
350
THR
350
A
ALA
351
n
351
ALA
351
A
CYS
352
n
352
CYS
352
A
CYS
352
n
353
LYS
353
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
19
A
O
VAL
19
A
N
VAL
53
A
N
VAL
53
A
O
LEU
52
A
O
LEU
52
A
N
THR
92
A
N
THR
92
A
O
ILE
91
A
O
ILE
91
A
N
VAL
114
A
N
VAL
114
A
O
VAL
113
A
O
VAL
113
A
N
TRP
142
A
N
TRP
142
A
O
VAL
141
A
O
VAL
141
A
N
THR
179
A
N
THR
179
A
O
VAL
178
A
O
VAL
178
A
N
ASN
204
A
N
ASN
204
A
O
ILE
205
A
O
ILE
205
A
N
LEU
226
A
N
LEU
226
A
O
VAL
227
A
O
VAL
227
A
N
GLN
249
A
N
GLN
249
A
O
ALA
250
A
O
ALA
250
A
N
THR
275
A
N
THR
275
A
O
VAL
82
A
O
VAL
82
A
N
GLY
104
A
N
GLY
104
A
O
ILE
105
A
O
ILE
105
A
N
ARG
134
A
N
ARG
134
A
O
ILE
133
A
O
ILE
133
A
N
ASP
170
A
N
ASP
170
A
O
ILE
120
A
O
ILE
120
A
N
GLU
147
A
N
GLU
147
A
O
LEU
148
A
O
LEU
148
A
N
TYR
184
A
N
TYR
184
A
O
ILE
185
A
O
ILE
185
A
N
TYR
211
A
N
TYR
211
A
O
TYR
212
A
O
TYR
212
A
N
LEU
233
A
N
LEU
233
A
O
TYR
234
A
O
TYR
234
A
N
TRP
256
A
N
TRP
256
A
O
GLN
222
A
O
GLN
222
A
N
ASN
243
A
N
ASN
243
1
A
CA
LYS
353
A
CA
LYS
353
1
Y
1
A
C
LYS
353
A
C
LYS
353
1
Y
1
A
O
LYS
353
A
O
LYS
353
1
Y
1
A
CB
LYS
353
A
CB
LYS
353
1
Y
1
A
CG
LYS
353
A
CG
LYS
353
1
Y
1
A
CD
LYS
353
A
CD
LYS
353
1
Y
1
A
CE
LYS
353
A
CE
LYS
353
1
Y
1
A
NZ
LYS
353
A
NZ
LYS
353
1
Y
1
-17.38
2.70
111.00
93.62
A
A
A
N
CA
C
LEU
LEU
LEU
221
221
221
N
1
A
ALA
150
-170.84
-140.57
1
A
ASP
162
-156.31
2.84
1
A
ALA
174
-73.52
33.37
1
A
ARG
203
70.60
156.28
1
A
ARG
218
70.60
72.59
1
A
TYR
268
97.99
-20.62
1
A
ALA
306
-90.31
40.78
0.221
0.221
2.2
10.0
24983
10000000.00
0.001
1
2.0
MOLECULAR REPLACEMENT
PREVIOUS PELC MODEL
2.2
10.0
0
2650
1
0
2649
0.007
1.598
1.190
2.2
10.0
1PLU
24983
0
1
data collection
SDMS
SOFTWARE
data reduction
SDMS
SOFTWARE
model building
X-PLOR
refinement
X-PLOR
3.1
data scaling
SDMS
phasing
X-PLOR
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI WITH 1 LU+3 ION IN THE PUTATIVE CALCIUM BINDING SITE
1
N
N
2
N
N
A
MET
26
A
MET
26
HELX_P
A
ARG
37
A
ARG
37
1
1
12
A
ASP
61
A
ASP
61
HELX_P
A
ALA
69
A
ALA
69
1
2
9
A
ILE
71
A
ILE
71
HELX_P
A
GLY
73
A
GLY
73
5
3
3
A
GLY
126
A
GLY
126
HELX_P
A
LYS
128
A
LYS
128
5
4
3
A
PRO
159
A
PRO
159
HELX_P
A
ASN
161
A
ASN
161
5
5
3
A
PRO
286
A
PRO
286
HELX_P
A
ASP
288
A
ASP
288
5
6
3
A
ALA
327
A
ALA
327
HELX_P
A
GLY
336
A
GLY
336
1
7
10
disulf
2.025
A
CYS
72
A
SG
CYS
72
1_555
A
CYS
155
A
SG
CYS
155
1_555
disulf
2.029
A
CYS
329
A
SG
CYS
329
1_555
A
CYS
352
A
SG
CYS
352
1_555
LYASE
PECTATE CLEAVAGE, PECTINOLYTIC ACTIVITY, TRANS-ELIMINATION, PARALLEL BETA-HELIX, LYASE
A
LEU
219
A
LEU
219
1
A
PRO
220
A
PRO
220
0.09
PELC_ERWCH
UNP
1
P11073
23
375
1PLU
1
353
P11073
A
1
1
353
10
4
6
2
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
VAL
19
A
VAL
19
A
ALA
23
A
ALA
23
A
LEU
52
A
LEU
52
A
TYR
56
A
TYR
56
A
ILE
91
A
ILE
91
A
GLY
95
A
GLY
95
A
VAL
113
A
VAL
113
A
GLN
116
A
GLN
116
A
VAL
141
A
VAL
141
A
ASP
144
A
ASP
144
A
THR
177
A
THR
177
A
SER
181
A
SER
181
A
ASN
204
A
ASN
204
A
HIS
208
A
HIS
208
A
LEU
226
A
LEU
226
A
TYR
230
A
TYR
230
A
GLN
249
A
GLN
249
A
GLU
253
A
GLU
253
A
THR
275
A
THR
275
A
LYS
279
A
LYS
279
A
GLY
81
A
GLY
81
A
LYS
85
A
LYS
85
A
GLY
104
A
GLY
104
A
LYS
108
A
LYS
108
A
ILE
133
A
ILE
133
A
ASP
136
A
ASP
136
A
VAL
169
A
VAL
169
A
LYS
172
A
LYS
172
A
ARG
119
A
ARG
119
A
GLY
121
A
GLY
121
A
GLU
147
A
GLU
147
A
PHE
149
A
PHE
149
A
TYR
184
A
TYR
184
A
HIS
186
A
HIS
186
A
TYR
211
A
TYR
211
A
ASN
213
A
ASN
213
A
LEU
233
A
LEU
233
A
THR
235
A
THR
235
A
TRP
256
A
TRP
256
A
GLU
258
A
GLU
258
A
LEU
221
A
LEU
221
A
ARG
223
A
ARG
223
A
ASN
243
A
ASN
243
A
ARG
245
A
ARG
245
RESIDUES COORDINATING TO LU3+ ION
Author
4
BINDING SITE FOR RESIDUE LU A 700
A
LU
700
Software
4
A
ASP
129
A
ASP
129
4
1_555
A
ASP
131
A
ASP
131
4
1_555
A
GLU
166
A
GLU
166
4
1_555
A
ASP
170
A
ASP
170
4
1_555
A
ASP
129
A
ASP
129
4
1_555
A
ASP
131
A
ASP
131
4
1_555
A
GLU
166
A
GLU
166
4
1_555
A
ASP
170
A
ASP
170
4
1_555
19
P 21 21 21