0.007212 0.000000 0.000248 0.000000 0.012714 0.000000 0.000000 0.000000 0.030412 0.00000 0.00000 0.00000 Donadini, R. Liew, C.W. Kwan, A.H. Mackay, J.P. Fields, B.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 91.97 90.00 138.651 78.652 32.901 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 12 145 156 10.1016/j.str.2003.12.002 14725774 Crystal and Solution Structures of a Superantigen from Yersinia pseudotuberculosis Reveal a Jelly-Roll Fold. 2004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2002-04-12 ADSC QUANTUM 4 2-crystal monochromator, Si111, 1m long Rh coated bent cylindrical mirror for horizontal and vertical focussing SINGLE WAVELENGTH M x-ray 1 1.071 1.0 BL1-5 SSRL 1.071 SYNCHROTRON SSRL BEAMLINE BL1-5 13223.785 YPM 3 man polymer 18.015 water 339 nat water no no LRIPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGEIKRNDIDKPLKYEDYYTS GLSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV LRIPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGEIKRNDIDKPLKYEDYYTS GLSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Yersinia Escherichia sample ypma 633 Yersinia pseudotuberculosis 562 Escherichia coli Novablue Plasmid pMAL-p2x 1 2.26 45.55 VAPOR DIFFUSION, SITTING DROP 5.8 Ammonium sulfate, PEG 200, sodium citrate, pH 5.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 repository Initial release Version format compliance Version format compliance 1 0 2004-01-27 1 1 2008-04-29 1 2 2011-07-13 BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 3 CHAIN(S). The trimerization may be biologically relevant but has not yet been established experimentally. The protein is a monomer in solution. RCSB Y RCSB 2003-06-09 REL REL HOH water HOH 201 2 HOH HOH 201 A HOH 202 2 HOH HOH 202 A HOH 203 2 HOH HOH 203 A HOH 204 2 HOH HOH 204 A HOH 205 2 HOH HOH 205 A HOH 207 2 HOH HOH 207 A HOH 208 2 HOH HOH 208 A HOH 210 2 HOH HOH 210 A HOH 218 2 HOH HOH 218 A HOH 219 2 HOH HOH 219 A HOH 220 2 HOH HOH 220 A HOH 221 2 HOH HOH 221 A HOH 223 2 HOH HOH 223 A HOH 225 2 HOH HOH 225 A HOH 227 2 HOH HOH 227 A HOH 232 2 HOH HOH 232 A HOH 233 2 HOH HOH 233 A HOH 236 2 HOH HOH 236 A HOH 239 2 HOH HOH 239 A HOH 240 2 HOH HOH 240 A HOH 241 2 HOH HOH 241 A HOH 242 2 HOH HOH 242 A HOH 244 2 HOH HOH 244 A HOH 245 2 HOH HOH 245 A HOH 248 2 HOH HOH 248 A HOH 250 2 HOH HOH 250 A HOH 257 2 HOH HOH 257 A HOH 258 2 HOH HOH 258 A HOH 260 2 HOH HOH 260 A HOH 261 2 HOH HOH 261 A HOH 262 2 HOH HOH 262 A HOH 266 2 HOH HOH 266 A HOH 268 2 HOH HOH 268 A HOH 277 2 HOH HOH 277 A HOH 279 2 HOH HOH 279 A HOH 280 2 HOH HOH 280 A HOH 283 2 HOH HOH 283 A HOH 287 2 HOH HOH 287 A HOH 290 2 HOH HOH 290 A HOH 292 2 HOH HOH 292 A HOH 293 2 HOH HOH 293 A HOH 294 2 HOH HOH 294 A HOH 296 2 HOH HOH 296 A HOH 297 2 HOH HOH 297 A HOH 303 2 HOH HOH 303 A HOH 314 2 HOH HOH 314 A HOH 319 2 HOH HOH 319 A HOH 327 2 HOH HOH 327 A HOH 328 2 HOH HOH 328 A HOH 330 2 HOH HOH 330 A HOH 331 2 HOH HOH 331 A HOH 332 2 HOH HOH 332 A HOH 336 2 HOH HOH 336 A HOH 341 2 HOH HOH 341 A HOH 342 2 HOH HOH 342 A HOH 344 2 HOH HOH 344 A HOH 345 2 HOH HOH 345 A HOH 346 2 HOH HOH 346 A HOH 349 2 HOH HOH 349 A HOH 351 2 HOH HOH 351 A HOH 352 2 HOH HOH 352 A HOH 353 2 HOH HOH 353 A HOH 354 2 HOH HOH 354 A HOH 358 2 HOH HOH 358 A HOH 365 2 HOH HOH 365 A HOH 370 2 HOH HOH 370 A HOH 372 2 HOH HOH 372 A HOH 377 2 HOH HOH 377 A HOH 378 2 HOH HOH 378 A HOH 380 2 HOH HOH 380 A HOH 381 2 HOH HOH 381 A HOH 382 2 HOH HOH 382 A HOH 384 2 HOH HOH 384 A HOH 385 2 HOH HOH 385 A HOH 387 2 HOH HOH 387 A HOH 388 2 HOH HOH 388 A HOH 390 2 HOH HOH 390 A HOH 391 2 HOH HOH 391 A HOH 392 2 HOH HOH 392 A HOH 393 2 HOH HOH 393 A HOH 396 2 HOH HOH 396 A HOH 397 2 HOH HOH 397 A HOH 398 2 HOH HOH 398 A HOH 399 2 HOH HOH 399 A HOH 400 2 HOH HOH 400 A HOH 401 2 HOH HOH 401 A HOH 405 2 HOH HOH 405 A HOH 409 2 HOH HOH 409 A HOH 411 2 HOH HOH 411 A HOH 413 2 HOH HOH 413 A HOH 415 2 HOH HOH 415 A HOH 417 2 HOH HOH 417 A HOH 418 2 HOH HOH 418 A HOH 419 2 HOH HOH 419 A HOH 421 2 HOH HOH 421 A HOH 422 2 HOH HOH 422 A HOH 423 2 HOH HOH 423 A HOH 424 2 HOH HOH 424 A HOH 433 2 HOH HOH 433 A HOH 447 2 HOH HOH 447 A HOH 448 2 HOH HOH 448 A HOH 450 2 HOH HOH 450 A HOH 456 2 HOH HOH 456 A HOH 457 2 HOH HOH 457 A HOH 460 2 HOH HOH 460 A HOH 462 2 HOH HOH 462 A HOH 464 2 HOH HOH 464 A HOH 478 2 HOH HOH 478 A HOH 479 2 HOH HOH 479 A HOH 482 2 HOH HOH 482 A HOH 485 2 HOH HOH 485 A HOH 486 2 HOH HOH 486 A HOH 490 2 HOH HOH 490 A HOH 492 2 HOH HOH 492 A HOH 494 2 HOH HOH 494 A HOH 498 2 HOH HOH 498 A HOH 499 2 HOH HOH 499 A HOH 503 2 HOH HOH 503 A HOH 505 2 HOH HOH 505 A HOH 506 2 HOH HOH 506 A HOH 511 2 HOH HOH 511 A HOH 518 2 HOH HOH 518 A HOH 520 2 HOH HOH 520 A HOH 526 2 HOH HOH 526 A HOH 528 2 HOH HOH 528 A HOH 530 2 HOH HOH 530 A HOH 531 2 HOH HOH 531 A HOH 533 2 HOH HOH 533 A HOH 534 2 HOH HOH 534 A HOH 536 2 HOH HOH 536 A HOH 539 2 HOH HOH 539 A HOH 206 2 HOH HOH 206 B HOH 211 2 HOH HOH 211 B HOH 212 2 HOH HOH 212 B HOH 213 2 HOH HOH 213 B HOH 215 2 HOH HOH 215 B HOH 216 2 HOH HOH 216 B HOH 217 2 HOH HOH 217 B HOH 224 2 HOH HOH 224 B HOH 226 2 HOH HOH 226 B HOH 228 2 HOH HOH 228 B HOH 229 2 HOH HOH 229 B HOH 230 2 HOH HOH 230 B HOH 231 2 HOH HOH 231 B HOH 234 2 HOH HOH 234 B HOH 237 2 HOH HOH 237 B HOH 243 2 HOH HOH 243 B HOH 247 2 HOH HOH 247 B HOH 249 2 HOH HOH 249 B HOH 252 2 HOH HOH 252 B HOH 254 2 HOH HOH 254 B HOH 256 2 HOH HOH 256 B HOH 264 2 HOH HOH 264 B HOH 265 2 HOH HOH 265 B HOH 267 2 HOH HOH 267 B HOH 270 2 HOH HOH 270 B HOH 272 2 HOH HOH 272 B HOH 273 2 HOH HOH 273 B HOH 276 2 HOH HOH 276 B HOH 278 2 HOH HOH 278 B HOH 282 2 HOH HOH 282 B HOH 289 2 HOH HOH 289 B HOH 291 2 HOH HOH 291 B HOH 295 2 HOH HOH 295 B HOH 299 2 HOH HOH 299 B HOH 301 2 HOH HOH 301 B HOH 305 2 HOH HOH 305 B HOH 307 2 HOH HOH 307 B HOH 309 2 HOH HOH 309 B HOH 310 2 HOH HOH 310 B HOH 312 2 HOH HOH 312 B HOH 315 2 HOH HOH 315 B HOH 316 2 HOH HOH 316 B HOH 317 2 HOH HOH 317 B HOH 320 2 HOH HOH 320 B HOH 322 2 HOH HOH 322 B HOH 323 2 HOH HOH 323 B HOH 324 2 HOH HOH 324 B HOH 325 2 HOH HOH 325 B HOH 334 2 HOH HOH 334 B HOH 335 2 HOH HOH 335 B HOH 339 2 HOH HOH 339 B HOH 340 2 HOH HOH 340 B HOH 343 2 HOH HOH 343 B HOH 348 2 HOH HOH 348 B HOH 350 2 HOH HOH 350 B HOH 356 2 HOH HOH 356 B HOH 360 2 HOH HOH 360 B HOH 361 2 HOH HOH 361 B HOH 363 2 HOH HOH 363 B HOH 367 2 HOH HOH 367 B HOH 373 2 HOH HOH 373 B HOH 375 2 HOH HOH 375 B HOH 383 2 HOH HOH 383 B HOH 389 2 HOH HOH 389 B HOH 395 2 HOH HOH 395 B HOH 402 2 HOH HOH 402 B HOH 403 2 HOH HOH 403 B HOH 404 2 HOH HOH 404 B HOH 420 2 HOH HOH 420 B HOH 425 2 HOH HOH 425 B HOH 426 2 HOH HOH 426 B HOH 428 2 HOH HOH 428 B HOH 429 2 HOH HOH 429 B HOH 431 2 HOH HOH 431 B HOH 434 2 HOH HOH 434 B HOH 436 2 HOH HOH 436 B HOH 438 2 HOH HOH 438 B HOH 440 2 HOH HOH 440 B HOH 441 2 HOH HOH 441 B HOH 443 2 HOH HOH 443 B HOH 444 2 HOH HOH 444 B HOH 449 2 HOH HOH 449 B HOH 455 2 HOH HOH 455 B HOH 465 2 HOH HOH 465 B HOH 466 2 HOH HOH 466 B HOH 468 2 HOH HOH 468 B HOH 469 2 HOH HOH 469 B HOH 471 2 HOH HOH 471 B HOH 472 2 HOH HOH 472 B HOH 473 2 HOH HOH 473 B HOH 481 2 HOH HOH 481 B HOH 487 2 HOH HOH 487 B HOH 496 2 HOH HOH 496 B HOH 497 2 HOH HOH 497 B HOH 500 2 HOH HOH 500 B HOH 501 2 HOH HOH 501 B HOH 502 2 HOH HOH 502 B HOH 504 2 HOH HOH 504 B HOH 510 2 HOH HOH 510 B HOH 512 2 HOH HOH 512 B HOH 513 2 HOH HOH 513 B HOH 516 2 HOH HOH 516 B HOH 529 2 HOH HOH 529 B HOH 537 2 HOH HOH 537 B HOH 209 2 HOH HOH 209 C HOH 214 2 HOH HOH 214 C HOH 222 2 HOH HOH 222 C HOH 235 2 HOH HOH 235 C HOH 238 2 HOH HOH 238 C HOH 246 2 HOH HOH 246 C HOH 251 2 HOH HOH 251 C HOH 253 2 HOH HOH 253 C HOH 255 2 HOH HOH 255 C HOH 259 2 HOH HOH 259 C HOH 263 2 HOH HOH 263 C HOH 269 2 HOH HOH 269 C HOH 271 2 HOH HOH 271 C HOH 274 2 HOH HOH 274 C HOH 275 2 HOH HOH 275 C HOH 281 2 HOH HOH 281 C HOH 284 2 HOH HOH 284 C HOH 285 2 HOH HOH 285 C HOH 286 2 HOH HOH 286 C HOH 288 2 HOH HOH 288 C HOH 298 2 HOH HOH 298 C HOH 300 2 HOH HOH 300 C HOH 302 2 HOH HOH 302 C HOH 304 2 HOH HOH 304 C HOH 306 2 HOH HOH 306 C HOH 308 2 HOH HOH 308 C HOH 311 2 HOH HOH 311 C HOH 313 2 HOH HOH 313 C HOH 318 2 HOH HOH 318 C HOH 321 2 HOH HOH 321 C HOH 326 2 HOH HOH 326 C HOH 329 2 HOH HOH 329 C HOH 333 2 HOH HOH 333 C HOH 337 2 HOH HOH 337 C HOH 338 2 HOH HOH 338 C HOH 347 2 HOH HOH 347 C HOH 355 2 HOH HOH 355 C HOH 357 2 HOH HOH 357 C HOH 359 2 HOH HOH 359 C HOH 362 2 HOH HOH 362 C HOH 364 2 HOH HOH 364 C HOH 366 2 HOH HOH 366 C HOH 368 2 HOH HOH 368 C HOH 369 2 HOH HOH 369 C HOH 371 2 HOH HOH 371 C HOH 374 2 HOH HOH 374 C HOH 376 2 HOH HOH 376 C HOH 379 2 HOH HOH 379 C HOH 386 2 HOH HOH 386 C HOH 394 2 HOH HOH 394 C HOH 406 2 HOH HOH 406 C HOH 407 2 HOH HOH 407 C HOH 408 2 HOH HOH 408 C HOH 410 2 HOH HOH 410 C HOH 412 2 HOH HOH 412 C HOH 414 2 HOH HOH 414 C HOH 416 2 HOH HOH 416 C HOH 427 2 HOH HOH 427 C HOH 430 2 HOH HOH 430 C HOH 432 2 HOH HOH 432 C HOH 435 2 HOH HOH 435 C HOH 437 2 HOH HOH 437 C HOH 439 2 HOH HOH 439 C HOH 442 2 HOH HOH 442 C HOH 445 2 HOH HOH 445 C HOH 446 2 HOH HOH 446 C HOH 451 2 HOH HOH 451 C HOH 452 2 HOH HOH 452 C HOH 453 2 HOH HOH 453 C HOH 454 2 HOH HOH 454 C HOH 458 2 HOH HOH 458 C HOH 459 2 HOH HOH 459 C HOH 461 2 HOH HOH 461 C HOH 463 2 HOH HOH 463 C HOH 467 2 HOH HOH 467 C HOH 470 2 HOH HOH 470 C HOH 474 2 HOH HOH 474 C HOH 475 2 HOH HOH 475 C HOH 476 2 HOH HOH 476 C HOH 477 2 HOH HOH 477 C HOH 480 2 HOH HOH 480 C HOH 483 2 HOH HOH 483 C HOH 484 2 HOH HOH 484 C HOH 488 2 HOH HOH 488 C HOH 489 2 HOH HOH 489 C HOH 491 2 HOH HOH 491 C HOH 493 2 HOH HOH 493 C HOH 495 2 HOH HOH 495 C HOH 507 2 HOH HOH 507 C HOH 508 2 HOH HOH 508 C HOH 509 2 HOH HOH 509 C HOH 514 2 HOH HOH 514 C HOH 515 2 HOH HOH 515 C HOH 517 2 HOH HOH 517 C HOH 519 2 HOH HOH 519 C HOH 521 2 HOH HOH 521 C HOH 522 2 HOH HOH 522 C HOH 523 2 HOH HOH 523 C HOH 524 2 HOH HOH 524 C HOH 525 2 HOH HOH 525 C HOH 527 2 HOH HOH 527 C HOH 532 2 HOH HOH 532 C HOH 535 2 HOH HOH 535 C HOH 538 2 HOH HOH 538 C n 1 13 A n 2 14 A ILE 15 n 3 ILE 15 A PRO 16 n 4 PRO 16 A ASN 17 n 5 ASN 17 A ILE 18 n 6 ILE 18 A ALA 19 n 7 ALA 19 A THR 20 n 8 THR 20 A TYR 21 n 9 TYR 21 A THR 22 n 10 THR 22 A GLY 23 n 11 GLY 23 A THR 24 n 12 THR 24 A ILE 25 n 13 ILE 25 A GLN 26 n 14 GLN 26 A GLY 27 n 15 GLY 27 A LYS 28 n 16 LYS 28 A GLY 29 n 17 GLY 29 A GLU 30 n 18 GLU 30 A VAL 31 n 19 VAL 31 A CYS 32 n 20 CYS 32 A ILE 33 n 21 ILE 33 A ILE 34 n 22 ILE 34 A GLY 35 n 23 GLY 35 A ASN 36 n 24 ASN 36 A LYS 37 n 25 LYS 37 A GLU 38 n 26 GLU 38 A GLY 39 n 27 GLY 39 A LYS 40 n 28 LYS 40 A THR 41 n 29 THR 41 A ARG 42 n 30 ARG 42 A GLY 43 n 31 GLY 43 A GLY 44 n 32 GLY 44 A GLU 45 n 33 GLU 45 A LEU 46 n 34 LEU 46 A TYR 47 n 35 TYR 47 A ALA 48 n 36 ALA 48 A VAL 49 n 37 VAL 49 A LEU 50 n 38 LEU 50 A HIS 51 n 39 HIS 51 A SER 52 n 40 SER 52 A THR 53 n 41 THR 53 A ASN 54 n 42 ASN 54 A VAL 55 n 43 VAL 55 A ASN 56 n 44 ASN 56 A ALA 57 n 45 ALA 57 A ASP 58 n 46 ASP 58 A MET 59 n 47 MET 59 A THR 60 n 48 THR 60 A LEU 61 n 49 LEU 61 A ILE 62 n 50 ILE 62 A LEU 63 n 51 LEU 63 A LEU 64 n 52 LEU 64 A ARG 65 n 53 ARG 65 A ASN 66 n 54 ASN 66 A VAL 67 n 55 VAL 67 A GLY 68 n 56 GLY 68 A GLY 69 n 57 GLY 69 A ASN 70 n 58 ASN 70 A GLY 71 n 59 GLY 71 A TRP 72 n 60 TRP 72 A GLY 73 n 61 GLY 73 A GLU 74 n 62 GLU 74 A ILE 75 n 63 ILE 75 A LYS 76 n 64 LYS 76 A ARG 77 n 65 ARG 77 A ASN 78 n 66 ASN 78 A ASP 79 n 67 ASP 79 A ILE 80 n 68 ILE 80 A ASP 81 n 69 ASP 81 A LYS 82 n 70 LYS 82 A PRO 83 n 71 PRO 83 A LEU 84 n 72 LEU 84 A LYS 85 n 73 LYS 85 A TYR 86 n 74 TYR 86 A GLU 87 n 75 GLU 87 A ASP 88 n 76 ASP 88 A TYR 89 n 77 TYR 89 A TYR 90 n 78 TYR 90 A THR 91 n 79 THR 91 A SER 92 n 80 SER 92 A GLY 93 n 81 GLY 93 A LEU 94 n 82 LEU 94 A SER 95 n 83 SER 95 A TRP 96 n 84 TRP 96 A ILE 97 n 85 ILE 97 A TRP 98 n 86 TRP 98 A LYS 99 n 87 LYS 99 A ILE 100 n 88 ILE 100 A LYS 101 n 89 LYS 101 A ASN 102 n 90 ASN 102 A ASN 103 n 91 ASN 103 A SER 104 n 92 SER 104 A SER 105 n 93 SER 105 A GLU 106 n 94 GLU 106 A THR 107 n 95 THR 107 A SER 108 n 96 SER 108 A ASN 109 n 97 ASN 109 A TYR 110 n 98 TYR 110 A SER 111 n 99 SER 111 A LEU 112 n 100 LEU 112 A ASP 113 n 101 ASP 113 A ALA 114 n 102 ALA 114 A THR 115 n 103 THR 115 A VAL 116 n 104 VAL 116 A HIS 117 n 105 HIS 117 A ASP 118 n 106 ASP 118 A ASP 119 n 107 ASP 119 A LYS 120 n 108 LYS 120 A GLU 121 n 109 GLU 121 A ASP 122 n 110 ASP 122 A SER 123 n 111 SER 123 A ASP 124 n 112 ASP 124 A VAL 125 n 113 VAL 125 A LEU 126 n 114 LEU 126 A THR 127 n 115 THR 127 A LYS 128 n 116 LYS 128 A CYS 129 n 117 CYS 129 A PRO 130 n 118 PRO 130 A VAL 131 n 119 VAL 131 A n 1 13 B n 2 14 B ILE 15 n 3 ILE 15 B PRO 16 n 4 PRO 16 B ASN 17 n 5 ASN 17 B ILE 18 n 6 ILE 18 B ALA 19 n 7 ALA 19 B THR 20 n 8 THR 20 B TYR 21 n 9 TYR 21 B THR 22 n 10 THR 22 B GLY 23 n 11 GLY 23 B THR 24 n 12 THR 24 B ILE 25 n 13 ILE 25 B GLN 26 n 14 GLN 26 B GLY 27 n 15 GLY 27 B LYS 28 n 16 LYS 28 B GLY 29 n 17 GLY 29 B GLU 30 n 18 GLU 30 B VAL 31 n 19 VAL 31 B CYS 32 n 20 CYS 32 B ILE 33 n 21 ILE 33 B ILE 34 n 22 ILE 34 B GLY 35 n 23 GLY 35 B ASN 36 n 24 ASN 36 B LYS 37 n 25 LYS 37 B GLU 38 n 26 GLU 38 B GLY 39 n 27 GLY 39 B LYS 40 n 28 LYS 40 B THR 41 n 29 THR 41 B ARG 42 n 30 ARG 42 B GLY 43 n 31 GLY 43 B GLY 44 n 32 GLY 44 B GLU 45 n 33 GLU 45 B LEU 46 n 34 LEU 46 B TYR 47 n 35 TYR 47 B ALA 48 n 36 ALA 48 B VAL 49 n 37 VAL 49 B LEU 50 n 38 LEU 50 B HIS 51 n 39 HIS 51 B SER 52 n 40 SER 52 B THR 53 n 41 THR 53 B ASN 54 n 42 ASN 54 B VAL 55 n 43 VAL 55 B ASN 56 n 44 ASN 56 B ALA 57 n 45 ALA 57 B ASP 58 n 46 ASP 58 B MET 59 n 47 MET 59 B THR 60 n 48 THR 60 B LEU 61 n 49 LEU 61 B ILE 62 n 50 ILE 62 B LEU 63 n 51 LEU 63 B LEU 64 n 52 LEU 64 B ARG 65 n 53 ARG 65 B ASN 66 n 54 ASN 66 B VAL 67 n 55 VAL 67 B GLY 68 n 56 GLY 68 B GLY 69 n 57 GLY 69 B ASN 70 n 58 ASN 70 B GLY 71 n 59 GLY 71 B TRP 72 n 60 TRP 72 B GLY 73 n 61 GLY 73 B GLU 74 n 62 GLU 74 B ILE 75 n 63 ILE 75 B LYS 76 n 64 LYS 76 B ARG 77 n 65 ARG 77 B ASN 78 n 66 ASN 78 B ASP 79 n 67 ASP 79 B ILE 80 n 68 ILE 80 B ASP 81 n 69 ASP 81 B LYS 82 n 70 LYS 82 B PRO 83 n 71 PRO 83 B LEU 84 n 72 LEU 84 B LYS 85 n 73 LYS 85 B TYR 86 n 74 TYR 86 B GLU 87 n 75 GLU 87 B ASP 88 n 76 ASP 88 B TYR 89 n 77 TYR 89 B TYR 90 n 78 TYR 90 B THR 91 n 79 THR 91 B SER 92 n 80 SER 92 B GLY 93 n 81 GLY 93 B LEU 94 n 82 LEU 94 B SER 95 n 83 SER 95 B TRP 96 n 84 TRP 96 B ILE 97 n 85 ILE 97 B TRP 98 n 86 TRP 98 B LYS 99 n 87 LYS 99 B ILE 100 n 88 ILE 100 B LYS 101 n 89 LYS 101 B ASN 102 n 90 ASN 102 B ASN 103 n 91 ASN 103 B SER 104 n 92 SER 104 B SER 105 n 93 SER 105 B GLU 106 n 94 GLU 106 B THR 107 n 95 THR 107 B SER 108 n 96 SER 108 B ASN 109 n 97 ASN 109 B TYR 110 n 98 TYR 110 B SER 111 n 99 SER 111 B LEU 112 n 100 LEU 112 B ASP 113 n 101 ASP 113 B ALA 114 n 102 ALA 114 B THR 115 n 103 THR 115 B VAL 116 n 104 VAL 116 B HIS 117 n 105 HIS 117 B ASP 118 n 106 ASP 118 B ASP 119 n 107 ASP 119 B LYS 120 n 108 LYS 120 B GLU 121 n 109 GLU 121 B ASP 122 n 110 ASP 122 B SER 123 n 111 SER 123 B ASP 124 n 112 ASP 124 B VAL 125 n 113 VAL 125 B LEU 126 n 114 LEU 126 B THR 127 n 115 THR 127 B LYS 128 n 116 LYS 128 B CYS 129 n 117 CYS 129 B PRO 130 n 118 PRO 130 B VAL 131 n 119 VAL 131 B n 1 13 C n 2 14 C ILE 15 n 3 ILE 15 C PRO 16 n 4 PRO 16 C ASN 17 n 5 ASN 17 C ILE 18 n 6 ILE 18 C ALA 19 n 7 ALA 19 C THR 20 n 8 THR 20 C TYR 21 n 9 TYR 21 C THR 22 n 10 THR 22 C GLY 23 n 11 GLY 23 C THR 24 n 12 THR 24 C ILE 25 n 13 ILE 25 C GLN 26 n 14 GLN 26 C GLY 27 n 15 GLY 27 C LYS 28 n 16 LYS 28 C GLY 29 n 17 GLY 29 C GLU 30 n 18 GLU 30 C VAL 31 n 19 VAL 31 C CYS 32 n 20 CYS 32 C ILE 33 n 21 ILE 33 C ILE 34 n 22 ILE 34 C GLY 35 n 23 GLY 35 C ASN 36 n 24 ASN 36 C LYS 37 n 25 LYS 37 C GLU 38 n 26 GLU 38 C GLY 39 n 27 GLY 39 C LYS 40 n 28 LYS 40 C THR 41 n 29 THR 41 C ARG 42 n 30 ARG 42 C GLY 43 n 31 GLY 43 C GLY 44 n 32 GLY 44 C GLU 45 n 33 GLU 45 C LEU 46 n 34 LEU 46 C TYR 47 n 35 TYR 47 C ALA 48 n 36 ALA 48 C VAL 49 n 37 VAL 49 C LEU 50 n 38 LEU 50 C HIS 51 n 39 HIS 51 C SER 52 n 40 SER 52 C THR 53 n 41 THR 53 C ASN 54 n 42 ASN 54 C VAL 55 n 43 VAL 55 C ASN 56 n 44 ASN 56 C ALA 57 n 45 ALA 57 C ASP 58 n 46 ASP 58 C MET 59 n 47 MET 59 C THR 60 n 48 THR 60 C LEU 61 n 49 LEU 61 C ILE 62 n 50 ILE 62 C LEU 63 n 51 LEU 63 C LEU 64 n 52 LEU 64 C ARG 65 n 53 ARG 65 C ASN 66 n 54 ASN 66 C VAL 67 n 55 VAL 67 C GLY 68 n 56 GLY 68 C GLY 69 n 57 GLY 69 C ASN 70 n 58 ASN 70 C GLY 71 n 59 GLY 71 C TRP 72 n 60 TRP 72 C GLY 73 n 61 GLY 73 C GLU 74 n 62 GLU 74 C ILE 75 n 63 ILE 75 C LYS 76 n 64 LYS 76 C ARG 77 n 65 ARG 77 C ASN 78 n 66 ASN 78 C ASP 79 n 67 ASP 79 C ILE 80 n 68 ILE 80 C ASP 81 n 69 ASP 81 C LYS 82 n 70 LYS 82 C PRO 83 n 71 PRO 83 C LEU 84 n 72 LEU 84 C LYS 85 n 73 LYS 85 C TYR 86 n 74 TYR 86 C GLU 87 n 75 GLU 87 C ASP 88 n 76 ASP 88 C TYR 89 n 77 TYR 89 C TYR 90 n 78 TYR 90 C THR 91 n 79 THR 91 C SER 92 n 80 SER 92 C GLY 93 n 81 GLY 93 C LEU 94 n 82 LEU 94 C SER 95 n 83 SER 95 C TRP 96 n 84 TRP 96 C ILE 97 n 85 ILE 97 C TRP 98 n 86 TRP 98 C LYS 99 n 87 LYS 99 C ILE 100 n 88 ILE 100 C LYS 101 n 89 LYS 101 C ASN 102 n 90 ASN 102 C ASN 103 n 91 ASN 103 C SER 104 n 92 SER 104 C SER 105 n 93 SER 105 C GLU 106 n 94 GLU 106 C THR 107 n 95 THR 107 C SER 108 n 96 SER 108 C ASN 109 n 97 ASN 109 C TYR 110 n 98 TYR 110 C SER 111 n 99 SER 111 C LEU 112 n 100 LEU 112 C ASP 113 n 101 ASP 113 C ALA 114 n 102 ALA 114 C THR 115 n 103 THR 115 C VAL 116 n 104 VAL 116 C HIS 117 n 105 HIS 117 C ASP 118 n 106 ASP 118 C ASP 119 n 107 ASP 119 C LYS 120 n 108 LYS 120 C GLU 121 n 109 GLU 121 C ASP 122 n 110 ASP 122 C SER 123 n 111 SER 123 C ASP 124 n 112 ASP 124 C VAL 125 n 113 VAL 125 C LEU 126 n 114 LEU 126 C THR 127 n 115 THR 127 C LYS 128 n 116 LYS 128 C CYS 129 n 117 CYS 129 C PRO 130 n 118 PRO 130 C VAL 131 n 119 VAL 131 C author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 25 A N ILE 13 A O SER 108 A O SER 96 A O SER 111 A O SER 99 A N HIS 51 A N HIS 39 A N GLY 44 A N GLY 32 A O ASP 88 A O ASP 76 A N TYR 89 A N TYR 77 B O TRP 72 B O TRP 60 B O ILE 75 B O ILE 63 B N LEU 63 B N LEU 51 B N ILE 62 B N ILE 50 B O LYS 99 B O LYS 87 B O TRP 96 B O TRP 84 B N GLY 35 B N GLY 23 A N VAL 31 A N VAL 19 A O ILE 100 A O ILE 88 A O ILE 97 A O ILE 85 A N LEU 64 A N LEU 52 A N LEU 63 A N LEU 51 A O ILE 75 A O ILE 63 A N TRP 72 A N TRP 60 C O TYR 89 C O TYR 77 C O TYR 86 C O TYR 74 C N LEU 46 C N LEU 34 C N HIS 51 C N HIS 39 C O SER 111 C O SER 99 C O LEU 112 C O LEU 100 C N TYR 21 C N TYR 9 B N TYR 21 B N TYR 9 B O LEU 112 B O LEU 100 B O SER 111 B O SER 99 B N HIS 51 B N HIS 39 B N ALA 48 B N ALA 36 B O LEU 84 B O LEU 72 C N VAL 31 C N VAL 19 C O ILE 100 C O ILE 88 C O LYS 99 C O LYS 87 C N ILE 62 C N ILE 50 C N LEU 63 C N LEU 51 C O ILE 75 C O ILE 63 1 A LEU 13 A LEU 1 1 Y 1 A ARG 14 A ARG 2 1 Y 1 B LEU 13 B LEU 1 1 Y 1 B ARG 14 B ARG 2 1 Y 1 C LEU 13 C LEU 1 1 Y 1 C ARG 14 C ARG 2 1 Y 1 B B VAL GLY 67 68 148.64 1 5.61 0.90 118.30 123.91 B B B CB CG OD2 ASP ASP ASP 118 118 118 N 1 7.02 0.90 118.30 125.32 C C C CB CG OD2 ASP ASP ASP 88 88 88 N 1 A A CD OE2 GLU GLU 87 87 -0.072 0.011 1.252 1.180 N 1 A ASP 81 76.66 -2.52 1 A ASP 118 -93.78 -128.67 1 B ASN 17 -165.05 74.58 1 B ARG 42 -167.13 90.34 1 B ASN 66 -92.75 49.77 1 B VAL 67 29.17 -109.77 1 B TYR 89 -141.28 32.60 1 B SER 92 32.50 -73.75 1 B LEU 94 177.64 165.62 1 C ASN 70 -155.39 -41.54 1 C TYR 89 -154.72 84.69 1 C ASP 118 -110.71 -80.00 18.498 0.78 0.00 -0.90 0.07 0.00 -0.91 0.958 0.930 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.22926 0.18201 0.18438 0.18438 1.755 34.71 1749 35113 33364 5.0 99.30 2.441 0.079 RANDOM 1 THROUGHOUT 0.0 MAD 0.125 0.125 0.80 0.80 1.40 BABINET MODEL WITH MASK 1.755 34.71 339 3087 0 0 2748 0.021 0.021 2799 0.002 0.020 2450 1.897 1.951 3796 0.932 3.000 5759 7.836 5.000 348 0.120 0.200 428 0.009 0.020 3104 0.002 0.020 504 0.227 0.200 544 0.263 0.200 2966 0.088 0.200 1765 0.157 0.200 242 0.126 0.200 13 0.308 0.200 74 0.126 0.200 22 1.398 1.500 1732 2.393 2.000 2803 2.833 3.000 1067 4.200 4.500 993 0.256 0.222 1.800 124 2350 20 1.75 40.0 1PM4 253851 253092 0.0 0.0 0.045 1 39.1 7.2 99.7 0.515 1.755 1.80 3.2 99.1 refinement REFMAC 5.1.24 data reduction DENZO data scaling SCALEPACK phasing SOLVE YPM Crystal structure of Yersinia pseudotuberculosis-derived mitogen (YPM) 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N A GLU 121 A GLU 109 HELX_P A VAL 125 A VAL 113 5 1 5 B GLU 121 B GLU 109 HELX_P B VAL 125 B VAL 113 5 2 5 C GLU 121 C GLU 109 HELX_P C VAL 125 C VAL 113 5 3 5 disulf 1.993 A CYS 32 A SG CYS 20 1_555 A CYS 129 A SG CYS 117 1_555 disulf 1.985 B CYS 32 B SG CYS 20 1_555 B CYS 129 B SG CYS 117 1_555 disulf 2.006 C CYS 32 C SG CYS 20 1_555 C CYS 129 C SG CYS 117 1_555 TOXIN Jelly roll fold, TOXIN Q57221_YERPS UNP 1 33 Q57221 LRIPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGEIKRNDIDKPLKYEDYYTS GLSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV 33 151 1PM4 13 131 Q57221 A 1 1 119 33 151 1PM4 13 131 Q57221 B 1 1 119 33 151 1PM4 13 131 Q57221 C 1 1 119 8 8 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 18 A ILE 6 A ILE 25 A ILE 13 A SER 108 A SER 96 A THR 115 A THR 103 A GLY 44 A GLY 32 A HIS 51 A HIS 39 A LEU 84 A LEU 72 A TYR 90 A TYR 78 B GLY 71 B GLY 59 B ASP 79 B ASP 67 B MET 59 B MET 47 B ARG 65 B ARG 53 B TRP 96 B TRP 84 B ASN 102 B ASN 90 B GLU 30 B GLU 18 B GLY 35 B GLY 23 A GLU 30 A GLU 18 A GLY 35 A GLY 23 A TRP 96 A TRP 84 A ASN 102 A ASN 90 A MET 59 A MET 47 A ASN 66 A ASN 54 A GLY 71 A GLY 59 A ASP 79 A ASP 67 C LEU 84 C LEU 72 C TYR 90 C TYR 78 C GLY 43 C GLY 31 C HIS 51 C HIS 39 C SER 108 C SER 96 C THR 115 C THR 103 C ILE 18 C ILE 6 C ILE 25 C ILE 13 B ILE 18 B ILE 6 B ILE 25 B ILE 13 B SER 108 B SER 96 B THR 115 B THR 103 B GLY 44 B GLY 32 B HIS 51 B HIS 39 B LEU 84 B LEU 72 B ASP 88 B ASP 76 C GLU 30 C GLU 18 C GLY 35 C GLY 23 C TRP 96 C TRP 84 C ASN 102 C ASN 90 C MET 59 C MET 47 C ASN 66 C ASN 54 C TRP 72 C TRP 60 C ASP 79 C ASP 67 5 C 1 2 1