0.034270
0.000000
0.000000
0.000000
0.021603
0.000000
0.000000
0.000000
0.017655
0.00000
0.00000
0.00000
CIS PROLINE - PRO 16
CIS PROLINE - PRO 36
THE LIGANDS OF THE CU ATOM ARE ND1 (HIS 37), SG (CYS 84), ND1 (HIS 87), AND SD (MET 92).
Fields, B.A.
Guss, J.M.
Freeman, H.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
29.180
46.290
56.640
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 2
63.546
COPPER (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
O
N
21
N
N
N
22
N
O
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
N
N
32
S
C
N
33
N
C
N
34
N
O
N
35
N
C
N
36
N
C
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
CU
N
48
N
N
N
49
R
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
S
N
54
N
O
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
N
N
63
S
C
N
64
N
C
N
65
N
O
N
66
N
C
N
67
N
C
N
68
N
C
N
69
N
O
N
70
N
N
N
71
N
O
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
N
C
N
103
N
C
N
104
N
O
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
Y
116
N
C
Y
117
N
N
Y
118
N
C
Y
119
N
C
Y
120
N
N
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
N
N
136
S
C
N
137
N
C
N
138
N
O
N
139
S
C
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
S
C
N
159
N
C
N
160
N
O
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
N
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
N
209
N
C
N
210
N
S
N
211
N
C
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
Y
229
N
C
Y
230
N
C
Y
231
N
C
Y
232
N
C
Y
233
N
C
Y
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
N
269
N
O
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
N
306
N
O
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
Y
114
N
sing
Y
115
N
doub
Y
116
N
doub
N
117
N
sing
Y
118
N
sing
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
Y
222
N
doub
Y
223
N
sing
Y
224
N
sing
N
225
N
sing
Y
226
N
doub
N
227
N
sing
Y
228
N
doub
N
229
N
sing
Y
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
doub
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
Y
291
N
doub
Y
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
doub
N
296
N
sing
Y
297
N
doub
N
298
N
sing
Y
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
50
709
730
10.1107/S0907444994003021
15299368
Accuracy and precision in protein crystal structure analysis: two independent refinements of the structure of poplar plastocyanin at 173 K.
1994
DK
Acta Crystallogr.,Sect.B
ASBSDK
0622
0108-7681
48
790
Accuracy and Precision in Protein Structure Analysis: Restrained Least-Squares Refinement of the Structure of Poplar Plastocyanin at 1.33 Angstroms Resolution
1992
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
169
521
Structure of Oxidised Poplar Plastocyanin at 1.6 Angstroms Resolution
1983
UK
Nature
NATUAS
0006
0028-0836
272
319
X-Ray Crystal Structure Analysis of Plastocyanin at 2.7 Angstroms Resolution
1978
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
110
187
Preliminary Crystallographic Data for a Copper Containing Protein, Plastocyanin
1977
10.2210/pdb1pnc/pdb
pdb_00001pnc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
ENRAF-NONIUS
x-ray
1
1.0
X31
EMBL/DESY, HAMBURG
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X31
10493.607
PLASTOCYANIN
1
man
polymer
63.546
COPPER (II) ION
1
syn
non-polymer
18.015
water
189
nat
water
no
no
IDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEY
SFYCSPHQGAGMVGKVTVN
IDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEY
SFYCSPHQGAGMVGKVTVN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Populus
sample
3691
Populus nigra
1.82
32.48
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_database_status
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Data collection
Database references
Derived calculations
Other
1
0
1994-01-31
1
1
2008-03-03
1
2
2011-07-13
1
3
2012-08-08
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_pdbx_database_status.process_site
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1993-09-22
REL
REL
CU
COPPER (II) ION
HOH
water
CU
100
2
CU
CU
100
A
HOH
101
3
HOH
HOH
101
A
HOH
102
3
HOH
HOH
102
A
HOH
103
3
HOH
HOH
103
A
HOH
104
3
HOH
HOH
104
A
HOH
105
3
HOH
HOH
105
A
HOH
106
3
HOH
HOH
106
A
HOH
107
3
HOH
HOH
107
A
HOH
108
3
HOH
HOH
108
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
125
3
HOH
HOH
125
A
HOH
126
3
HOH
HOH
126
A
HOH
127
3
HOH
HOH
127
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
HOH
145
3
HOH
HOH
145
A
HOH
146
3
HOH
HOH
146
A
HOH
147
3
HOH
HOH
147
A
HOH
148
3
HOH
HOH
148
A
HOH
149
3
HOH
HOH
149
A
HOH
150
3
HOH
HOH
150
A
HOH
151
3
HOH
HOH
151
A
HOH
152
3
HOH
HOH
152
A
HOH
153
3
HOH
HOH
153
A
HOH
154
3
HOH
HOH
154
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
157
3
HOH
HOH
157
A
HOH
158
3
HOH
HOH
158
A
HOH
159
3
HOH
HOH
159
A
HOH
160
3
HOH
HOH
160
A
HOH
161
3
HOH
HOH
161
A
HOH
162
3
HOH
HOH
162
A
HOH
163
3
HOH
HOH
163
A
HOH
164
3
HOH
HOH
164
A
HOH
165
3
HOH
HOH
165
A
HOH
166
3
HOH
HOH
166
A
HOH
167
3
HOH
HOH
167
A
HOH
168
3
HOH
HOH
168
A
HOH
169
3
HOH
HOH
169
A
HOH
170
3
HOH
HOH
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
HOH
226
3
HOH
HOH
226
A
HOH
227
3
HOH
HOH
227
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
231
3
HOH
HOH
231
A
HOH
232
3
HOH
HOH
232
A
HOH
233
3
HOH
HOH
233
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
236
3
HOH
HOH
236
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
239
3
HOH
HOH
239
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
244
3
HOH
HOH
244
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
251
3
HOH
HOH
251
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
258
3
HOH
HOH
258
A
HOH
259
3
HOH
HOH
259
A
HOH
260
3
HOH
HOH
260
A
HOH
261
3
HOH
HOH
261
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
264
3
HOH
HOH
264
A
HOH
265
3
HOH
HOH
265
A
HOH
266
3
HOH
HOH
266
A
HOH
267
3
HOH
HOH
267
A
HOH
268
3
HOH
HOH
268
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
274
3
HOH
HOH
274
A
HOH
275
3
HOH
HOH
275
A
HOH
276
3
HOH
HOH
276
A
HOH
277
3
HOH
HOH
277
A
HOH
278
3
HOH
HOH
278
A
HOH
279
3
HOH
HOH
279
A
HOH
280
3
HOH
HOH
280
A
HOH
281
3
HOH
HOH
281
A
HOH
282
3
HOH
HOH
282
A
HOH
283
3
HOH
HOH
283
A
HOH
284
3
HOH
HOH
284
A
HOH
285
3
HOH
HOH
285
A
HOH
286
3
HOH
HOH
286
A
HOH
287
3
HOH
HOH
287
A
HOH
288
3
HOH
HOH
288
A
HOH
289
3
HOH
HOH
289
A
ILE
1
n
1
ILE
1
A
ASP
2
n
2
ASP
2
A
VAL
3
n
3
VAL
3
A
LEU
4
n
4
LEU
4
A
LEU
5
n
5
LEU
5
A
GLY
6
n
6
GLY
6
A
ALA
7
n
7
ALA
7
A
ASP
8
n
8
ASP
8
A
ASP
9
n
9
ASP
9
A
GLY
10
n
10
GLY
10
A
SER
11
n
11
SER
11
A
LEU
12
n
12
LEU
12
A
ALA
13
n
13
ALA
13
A
PHE
14
n
14
PHE
14
A
VAL
15
n
15
VAL
15
A
PRO
16
n
16
PRO
16
A
SER
17
n
17
SER
17
A
GLU
18
n
18
GLU
18
A
PHE
19
n
19
PHE
19
A
SER
20
n
20
SER
20
A
ILE
21
n
21
ILE
21
A
SER
22
n
22
SER
22
A
PRO
23
n
23
PRO
23
A
GLY
24
n
24
GLY
24
A
GLU
25
n
25
GLU
25
A
LYS
26
n
26
LYS
26
A
ILE
27
n
27
ILE
27
A
VAL
28
n
28
VAL
28
A
PHE
29
n
29
PHE
29
A
LYS
30
n
30
LYS
30
A
ASN
31
n
31
ASN
31
A
ASN
32
n
32
ASN
32
A
ALA
33
n
33
ALA
33
A
GLY
34
n
34
GLY
34
A
PHE
35
n
35
PHE
35
A
PRO
36
n
36
PRO
36
A
HIS
37
n
37
HIS
37
A
ASN
38
n
38
ASN
38
A
ILE
39
n
39
ILE
39
A
VAL
40
n
40
VAL
40
A
PHE
41
n
41
PHE
41
A
ASP
42
n
42
ASP
42
A
GLU
43
n
43
GLU
43
A
ASP
44
n
44
ASP
44
A
SER
45
n
45
SER
45
A
ILE
46
n
46
ILE
46
A
PRO
47
n
47
PRO
47
A
SER
48
n
48
SER
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
ASP
51
n
51
ASP
51
A
ALA
52
n
52
ALA
52
A
SER
53
n
53
SER
53
A
LYS
54
n
54
LYS
54
A
ILE
55
n
55
ILE
55
A
SER
56
n
56
SER
56
A
MET
57
n
57
MET
57
A
SER
58
n
58
SER
58
A
GLU
59
n
59
GLU
59
A
GLU
60
n
60
GLU
60
A
ASP
61
n
61
ASP
61
A
LEU
62
n
62
LEU
62
A
LEU
63
n
63
LEU
63
A
ASN
64
n
64
ASN
64
A
ALA
65
n
65
ALA
65
A
LYS
66
n
66
LYS
66
A
GLY
67
n
67
GLY
67
A
GLU
68
n
68
GLU
68
A
THR
69
n
69
THR
69
A
PHE
70
n
70
PHE
70
A
GLU
71
n
71
GLU
71
A
VAL
72
n
72
VAL
72
A
ALA
73
n
73
ALA
73
A
LEU
74
n
74
LEU
74
A
SER
75
n
75
SER
75
A
ASN
76
n
76
ASN
76
A
LYS
77
n
77
LYS
77
A
GLY
78
n
78
GLY
78
A
GLU
79
n
79
GLU
79
A
TYR
80
n
80
TYR
80
A
SER
81
n
81
SER
81
A
PHE
82
n
82
PHE
82
A
TYR
83
n
83
TYR
83
A
CYS
84
n
84
CYS
84
A
SER
85
n
85
SER
85
A
PRO
86
n
86
PRO
86
A
HIS
87
n
87
HIS
87
A
GLN
88
n
88
GLN
88
A
GLY
89
n
89
GLY
89
A
ALA
90
n
90
ALA
90
A
GLY
91
n
91
GLY
91
A
MET
92
n
92
MET
92
A
VAL
93
n
93
VAL
93
A
GLY
94
n
94
GLY
94
A
LYS
95
n
95
LYS
95
A
VAL
96
n
96
VAL
96
A
THR
97
n
97
THR
97
A
VAL
98
n
98
VAL
98
A
ASN
99
n
99
ASN
99
A
author_defined_assembly
1
monomeric
A
HIS
37
A
ND1
HIS
37
1_555
A
CU
100
B
CU
CU
1_555
A
CYS
84
A
SG
CYS
84
1_555
132.1
A
HIS
37
A
ND1
HIS
37
1_555
A
CU
100
B
CU
CU
1_555
A
HIS
87
A
ND1
HIS
87
1_555
103.4
A
CYS
84
A
SG
CYS
84
1_555
A
CU
100
B
CU
CU
1_555
A
HIS
87
A
ND1
HIS
87
1_555
114.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
15
A
O
VAL
15
A
N
LEU
4
A
N
LEU
4
A
N
VAL
3
A
N
VAL
3
A
O
VAL
28
A
O
VAL
28
A
N
PHE
29
A
N
PHE
29
A
O
PHE
70
A
O
PHE
70
A
N
PHE
19
A
N
PHE
19
A
O
LYS
95
A
O
LYS
95
A
N
VAL
98
A
N
VAL
98
A
O
GLY
78
A
O
GLY
78
A
O
TYR
83
A
O
TYR
83
A
N
VAL
40
A
N
VAL
40
1
-5.81
0.90
118.30
112.49
A
A
A
CB
CG
OD2
ASP
ASP
ASP
42
42
42
N
1
5.59
0.90
118.30
123.89
A
A
A
CB
CG
OD1
ASP
ASP
ASP
61
61
61
N
1
A
A
CD
OE2
GLU
GLU
59
59
0.068
0.011
1.252
1.320
N
1
A
A
CD
OE1
GLU
GLU
71
71
0.066
0.011
1.252
1.318
N
1
A
A
O
HG
GLY
SER
49
85
1.60
B
1_555
3_645
1
A
ASN
32
-123.84
-58.42
THE STRUCTURE WAS REFINED INDEPENDENTLY IN SYDNEY USING
PROLSQ AND IN HAMBURG USING EREF. THE STRUCTURES WERE
COMPARED ONLY AFTER THE REFINEMENTS WERE COMPLETE.
0.1320000
1.6
6.
7393
1
1.6
6.
189
928
1
0
738
0.014
refinement
PROLSQ
ACCURACY AND PRECISION IN PROTEIN CRYSTAL STRUCTURE ANALYSIS: TWO INDEPENDENT REFINEMENTS OF THE STRUCTURE OF POPLAR PLASTOCYANIN AT 173K
1
N
N
2
N
N
3
N
N
A
ASP
51
A
ASP
51
HELX_P
A
ILE
55
A
ILE
55
5
1
5
A
SER
85
A
SER
85
HELX_P
A
GLN
88
A
GLN
88
5
2
4
metalc
1.975
A
HIS
37
A
ND1
HIS
37
1_555
A
CU
100
B
CU
CU
1_555
metalc
2.141
A
CYS
84
A
SG
CYS
84
1_555
A
CU
100
B
CU
CU
1_555
metalc
1.951
A
HIS
87
A
ND1
HIS
87
1_555
A
CU
100
B
CU
CU
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT
A
VAL
15
A
VAL
15
1
A
PRO
16
A
PRO
16
-2.72
A
PHE
35
A
PHE
35
1
A
PRO
36
A
PRO
36
1.49
PLAS1_POPNI
UNP
1
1
P00299
MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAASAMIASNAMAIDVLLGADDGS
LAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAG
MVGKVTVN
70
168
1PNC
1
99
P00299
A
1
1
99
4
4
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
PHE
14
A
PHE
14
A
VAL
15
A
VAL
15
A
ASP
2
A
ASP
2
A
LEU
5
A
LEU
5
A
LYS
26
A
LYS
26
A
ASN
31
A
ASN
31
A
THR
69
A
THR
69
A
ALA
73
A
ALA
73
A
GLU
18
A
GLU
18
A
ILE
21
A
ILE
21
A
VAL
93
A
VAL
93
A
VAL
98
A
VAL
98
A
GLY
78
A
GLY
78
A
TYR
83
A
TYR
83
A
VAL
40
A
VAL
40
A
PHE
41
A
PHE
41
BINDING SITE FOR RESIDUE CU A 100
A
CU
100
Software
4
A
HIS
37
A
HIS
37
4
1_555
A
CYS
84
A
CYS
84
4
1_555
A
HIS
87
A
HIS
87
4
1_555
A
MET
92
A
MET
92
4
1_555
19
P 21 21 21