0.013628
0.007868
0.000000
0.000000
0.015736
0.000000
0.000000
0.000000
0.007078
0.00000
0.00000
0.00000
Betts, L.
Veal, J.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
120.00
73.380
73.380
141.280
C10 H16 N5 O4 1
270.265
2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE
peptide-like
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C10 H14 I N4 O5 1
397.146
2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-5-IODOURACIL
RNA linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H17 N4 O5 1
285.276
2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE
peptide-like
N
1
N
C
N
2
N
C
N
3
N
O
N
4
N
C
N
5
N
C
N
6
N
O
N
7
N
O
N
8
N
N
N
9
N
C
N
10
N
C
N
11
N
N
N
12
N
N
N
13
N
C
N
14
N
N
N
15
N
C
N
16
N
C
N
17
N
C
N
18
N
O
N
19
N
N
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
O
N
37
N
P
N
38
N
O
N
39
N
O
N
40
N
O
N
41
N
C
N
42
R
C
N
43
N
O
N
44
S
C
N
45
N
O
N
46
N
C
N
47
R
C
Y
48
N
N
Y
49
N
C
Y
50
N
N
Y
51
N
C
Y
52
N
C
N
53
N
N
Y
54
N
N
Y
55
N
C
Y
56
N
N
Y
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
P
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
C
N
78
R
C
N
79
N
O
N
80
S
C
N
81
N
O
N
82
N
C
N
83
R
C
Y
84
N
N
Y
85
N
C
Y
86
N
N
Y
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
C
N
92
N
N
N
93
N
N
Y
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
N
C
N
111
N
C
N
112
N
O
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
N
N
120
S
C
N
121
N
C
N
122
N
O
N
123
N
C
Y
124
N
C
Y
125
N
N
Y
126
N
C
Y
127
N
C
Y
128
N
N
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
O
N
149
N
O
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
N
N
154
N
N
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
N
N
159
N
C
N
160
N
O
N
161
N
C
N
162
N
I
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
N
N
178
S
C
N
179
N
C
N
180
N
O
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
C
N
195
N
C
N
196
N
O
N
197
N
O
N
198
N
N
N
199
N
C
N
200
N
C
N
201
N
N
N
202
N
N
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
N
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
doub
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
Y
64
N
sing
Y
65
N
doub
N
66
N
sing
Y
67
N
doub
N
68
N
sing
N
69
N
sing
Y
70
N
sing
Y
71
N
doub
N
72
N
sing
Y
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
Y
133
N
sing
Y
134
N
doub
Y
135
N
doub
N
136
N
sing
Y
137
N
sing
N
138
N
sing
Y
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
US
Science
SCIEAS
0038
0036-8075
270
1838
1841
8525381
A Nucleic Acid Triple Helix Formed by a Peptide Nucleic Acid-DNA Complex
1995
US
Science
SCIEAS
0038
0036-8075
265
777
780
NMR Solution Structure of a Peptide Nucleic Acid Complexed with RNA
1994
10.2210/pdb1pnn/pdb
pdb_00001pnn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
1
CCD
1994-05-08
IMAGE PLATE
1994-01-11
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
2
0.978
1.0
1.5418
1.0
A1
CHESS
0.978
SYNCHROTRON
CHESS BEAMLINE A1
1.5418
ROTATING ANODE
5322.071
PNA (NH2-P(*C*T*C*T*T*C*T*T*C-HIS-GLY-SER-SER-GLY-HIS-C*T*T*C*T*T*C*T*C)-COOH)
2
syn
polymer
CRYSTALLIZED FROM AMMONIUM SULFATE AND TRIS PH 8.5
2837.900
DNA (5'-D(GP*AP*AP*GP*AP*AP*GP*AP*G)-3')
2
syn
polymer
18.015
water
35
nat
water
HAIRPIN PNA:DNA TRIPLEX
no
yes
(CPN)(TPN)(CPN)(TPN)(IPN)(CPN)(TPN)(TPN)(CPN)HGSSGH(CPN)(TPN)(TPN)(CPN)(TPN)
(TPN)(CPN)(TPN)(CPN)
XXXXNXXXXHGSSGHXXXXXXXXX
A,C
polydeoxyribonucleotide
no
no
(DG)(DA)(DA)(DG)(DA)(DA)(DG)(DA)(DG)
GAAGAAGAG
B,D
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
3.31
62.79
8.5
pH 8.5
-10.216
1
19
A
9
B
1
0.638
A_CPN9:DG1_B
1
-4.894
0.562
-0.130
-0.064
5.232
1
20
A
8
B
2
4.618
A_TPN8:DA2_B
2
-5.489
0.134
-0.161
-0.082
-1.124
1
20
A
7
B
3
4.415
A_TPN7:DA3_B
3
-3.368
0.346
-0.168
-0.061
-0.635
1
19
A
6
B
4
1.006
A_CPN6:DG4_B
4
-4.547
0.414
-0.096
0.047
7.163
1
20
A
5
B
5
4.419
A_IPN5:DA5_B
5
-3.783
0.052
-0.372
0.120
1.175
1
20
A
4
B
6
4.550
A_TPN4:DA6_B
6
-1.463
0.315
-0.126
0.009
-0.221
1
19
A
3
B
7
-1.664
A_CPN3:DG7_B
7
0.022
0.305
-0.183
-0.116
7.286
1
20
A
2
B
8
-0.093
A_TPN2:DA8_B
8
-1.111
0.061
-0.601
-0.315
3.538
1
19
A
1
B
9
-3.048
A_CPN1:DG9_B
9
-4.840
0.412
0.134
-0.152
-10.175
1
19
D
9
C
1
-2.663
D_DG9:CPN1_C
10
-4.524
-0.211
-0.208
-0.085
10.471
1
20
C
2
D
8
1.952
C_TPN2:DA8_D
11
-1.608
0.137
-0.482
-0.086
1.155
1
19
C
3
D
7
0.753
C_CPN3:DG7_D
12
-1.305
0.468
-0.104
-0.104
1.848
1
20
C
4
D
6
6.780
C_TPN4:DA6_D
13
-3.722
0.442
-0.045
-0.121
8.906
1
20
C
5
D
5
7.431
C_IPN5:DA5_D
14
-7.296
0.121
-0.371
-0.050
-0.796
1
19
C
6
D
4
3.456
C_CPN6:DG4_D
15
-6.911
0.327
-0.066
-0.100
-2.738
1
20
C
7
D
3
7.079
C_TPN7:DA3_D
16
-5.921
0.158
-0.029
-0.048
2.863
1
20
C
8
D
2
6.884
C_TPN8:DA2_D
17
-6.894
-0.045
0.076
0.154
0.123
1
19
C
9
D
1
0.323
C_CPN9:DG1_D
18
-9.694
0.702
0.365
-0.116
-2.965
-24.694
A
A
9
8
15.617
B
B
1
2
-3.750
-6.599
-0.706
2.550
AA_CPN9TPN8:DA2DG1_BB
1
-0.714
-1.689
-23.799
-8.068
-1.422
-2.935
-22.324
A
A
8
7
4.684
B
B
2
3
-3.103
-1.811
-1.117
2.353
AA_TPN8TPN7:DA3DA2_BB
2
-0.640
-1.655
-22.243
-6.704
-2.665
-3.435
-21.187
A
A
7
6
-0.406
B
B
3
4
-3.372
0.149
-1.235
2.276
AA_TPN7CPN6:DG4DA3_BB
3
-0.884
-2.406
-21.168
-6.126
-2.975
-2.669
-22.967
A
A
6
5
14.426
B
B
4
5
-3.486
-5.671
-0.752
2.421
AA_CPN6IPN5:DA5DG4_BB
4
2.902
7.382
-22.077
-8.002
-2.871
-3.141
-19.813
A
A
5
4
5.061
B
B
5
6
-3.254
-1.735
-1.055
2.325
AA_IPN5TPN4:DA6DA5_BB
5
-2.351
-6.858
-19.598
-7.567
-1.969
-3.298
-21.964
A
A
4
3
0.529
B
B
6
7
-3.305
-0.202
-1.098
2.263
AA_TPN4CPN3:DG7DA6_BB
6
-0.278
-0.730
-21.961
-6.017
-2.774
-2.744
-22.781
A
A
3
2
13.900
B
B
7
8
-3.587
-5.412
-0.707
2.435
AA_CPN3TPN2:DA8DG7_BB
7
3.878
9.958
-21.799
-8.086
-3.167
-3.224
-22.217
A
A
2
1
5.350
B
B
8
9
-3.252
-2.047
-1.336
2.260
AA_TPN2CPN1:DG9DA8_BB
8
-4.152
-10.854
-21.735
-6.639
-1.898
-2.954
29.794
A
D
1
9
-6.072
B
C
9
1
-3.073
-3.116
0.056
-0.947
AD_CPN1DG9:CPN1DG9_CB
9
1.297
-2.527
29.607
-2.442
-0.359
1.143
-177.036
D
C
9
2
-19.590
C
D
1
8
2.094
39.010
-0.653
3.572
DC_DG9TPN2:DA8CPN1_DC
10
-169.418
-85.080
-122.335
-1.880
-0.732
2.814
22.836
C
C
2
3
12.913
D
D
8
7
3.629
5.043
0.739
-2.455
CC_TPN2CPN3:DG7DA8_DD
11
-4.122
10.553
21.899
-8.011
-3.347
3.239
21.909
C
C
3
4
1.644
D
D
7
6
3.285
0.625
1.114
-2.281
CC_CPN3TPN4:DA6DG7_DD
12
0.397
-1.045
21.897
-6.242
-2.777
3.156
20.263
C
C
4
5
4.015
D
D
6
5
3.194
1.406
1.079
-2.316
CC_TPN4IPN5:DA5DA6_DD
13
3.155
-9.010
19.970
-7.208
-1.665
2.574
22.878
C
C
5
6
15.811
D
D
5
4
3.484
6.175
0.755
-2.424
CC_IPN5CPN6:DG4DA5_DD
14
-3.174
8.127
21.812
-8.197
-2.976
3.442
21.194
C
C
6
7
-0.023
D
D
4
3
3.382
-0.009
1.233
-2.275
CC_CPN6TPN7:DA3DG4_DD
15
1.106
-3.009
21.165
-6.183
-2.872
2.891
22.330
C
C
7
8
5.663
D
D
3
2
3.096
2.189
1.086
-2.343
CC_TPN7TPN8:DA2DA3_DD
16
0.778
-2.013
22.211
-6.800
-2.538
2.655
24.440
C
C
8
9
11.036
D
D
2
1
3.182
4.644
0.878
-2.411
CC_TPN8CPN9:DG1DA2_DD
17
-0.534
1.269
23.995
-6.997
-2.224
atom_site
chem_comp_atom
chem_comp_bond
database_2
struct_conn
repository
Initial release
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
1
0
1996-03-08
1
1
2008-05-22
1
2
2011-07-13
2
0
2023-11-15
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.label_atom_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_label_atom_id
NDB
Y
NDB
1995-10-13
REL
REL
HOH
water
HOH
134
3
HOH
HOH
134
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
164
3
HOH
HOH
164
A
HOH
135
3
HOH
HOH
135
B
HOH
138
3
HOH
HOH
138
B
HOH
157
3
HOH
HOH
157
B
HOH
162
3
HOH
HOH
162
B
HOH
145
3
HOH
HOH
145
C
HOH
146
3
HOH
HOH
146
C
HOH
147
3
HOH
HOH
147
C
HOH
148
3
HOH
HOH
148
C
HOH
149
3
HOH
HOH
149
C
HOH
152
3
HOH
HOH
152
C
HOH
153
3
HOH
HOH
153
C
HOH
154
3
HOH
HOH
154
C
HOH
160
3
HOH
HOH
160
C
HOH
168
3
HOH
HOH
168
C
HOH
169
3
HOH
HOH
169
C
HOH
173
3
HOH
HOH
173
C
HOH
158
3
HOH
HOH
158
D
HOH
159
3
HOH
HOH
159
D
HOH
161
3
HOH
HOH
161
D
HOH
165
3
HOH
HOH
165
D
HOH
166
3
HOH
HOH
166
D
HOH
167
3
HOH
HOH
167
D
HOH
171
3
HOH
HOH
171
D
HOH
176
3
HOH
HOH
176
D
HOH
177
3
HOH
HOH
177
D
CPN
1
n
1
CPN
1
A
TPN
2
n
2
TPN
2
A
CPN
3
n
3
CPN
3
A
TPN
4
n
4
TPN
4
A
IPN
5
n
5
IPN
5
A
CPN
6
n
6
CPN
6
A
TPN
7
n
7
TPN
7
A
TPN
8
n
8
TPN
8
A
CPN
9
n
9
CPN
9
A
HIS
10
n
10
HIS
10
A
GLY
11
n
11
GLY
11
A
SER
12
n
12
SER
12
A
SER
13
n
13
SER
13
A
GLY
14
n
14
GLY
14
A
HIS
15
n
15
HIS
15
A
CPN
16
n
16
CPN
16
A
TPN
17
n
17
TPN
17
A
TPN
18
n
18
TPN
18
A
CPN
19
n
19
CPN
19
A
TPN
20
n
20
TPN
20
A
TPN
21
n
21
TPN
21
A
CPN
22
n
22
CPN
22
A
TPN
23
n
23
TPN
23
A
CPN
24
n
24
CPN
24
A
G
1
n
1
DG
1
B
A
2
n
2
DA
2
B
A
3
n
3
DA
3
B
G
4
n
4
DG
4
B
A
5
n
5
DA
5
B
A
6
n
6
DA
6
B
G
7
n
7
DG
7
B
A
8
n
8
DA
8
B
G
9
n
9
DG
9
B
CPN
1
n
1
CPN
1
C
TPN
2
n
2
TPN
2
C
CPN
3
n
3
CPN
3
C
TPN
4
n
4
TPN
4
C
IPN
5
n
5
IPN
5
C
CPN
6
n
6
CPN
6
C
TPN
7
n
7
TPN
7
C
TPN
8
n
8
TPN
8
C
CPN
9
n
9
CPN
9
C
HIS
10
n
10
HIS
10
C
GLY
11
n
11
GLY
11
C
SER
12
n
12
SER
12
C
SER
13
n
13
SER
13
C
GLY
14
n
14
GLY
14
C
HIS
15
n
15
HIS
15
C
CPN
16
n
16
CPN
16
C
TPN
17
n
17
TPN
17
C
TPN
18
n
18
TPN
18
C
CPN
19
n
19
CPN
19
C
TPN
20
n
20
TPN
20
C
TPN
21
n
21
TPN
21
C
CPN
22
n
22
CPN
22
C
TPN
23
n
23
TPN
23
C
CPN
24
n
24
CPN
24
C
G
1
n
1
DG
1
D
A
2
n
2
DA
2
D
A
3
n
3
DA
3
D
G
4
n
4
DG
4
D
A
5
n
5
DA
5
D
A
6
n
6
DA
6
D
G
7
n
7
DG
7
D
A
8
n
8
DA
8
D
G
9
n
9
DG
9
D
author_defined_assembly
4
tetrameric
A
CPN
1
A
CPN
1
DC
A
TPN
2
A
TPN
2
DT
A
CPN
3
A
CPN
3
DC
A
TPN
4
A
TPN
4
DT
A
CPN
6
A
CPN
6
DC
A
TPN
7
A
TPN
7
DT
A
TPN
8
A
TPN
8
DT
A
CPN
9
A
CPN
9
DC
A
CPN
16
A
CPN
16
DC
A
TPN
17
A
TPN
17
DT
A
TPN
18
A
TPN
18
DT
A
CPN
19
A
CPN
19
DC
A
TPN
20
A
TPN
20
DT
A
TPN
21
A
TPN
21
DT
A
CPN
22
A
CPN
22
DC
A
TPN
23
A
TPN
23
DT
A
CPN
24
A
CPN
24
DC
C
CPN
1
C
CPN
1
DC
C
TPN
2
C
TPN
2
DT
C
CPN
3
C
CPN
3
DC
C
TPN
4
C
TPN
4
DT
C
CPN
6
C
CPN
6
DC
C
TPN
7
C
TPN
7
DT
C
TPN
8
C
TPN
8
DT
C
CPN
9
C
CPN
9
DC
C
CPN
16
C
CPN
16
DC
C
TPN
17
C
TPN
17
DT
C
TPN
18
C
TPN
18
DT
C
CPN
19
C
CPN
19
DC
C
TPN
20
C
TPN
20
DT
C
TPN
21
C
TPN
21
DT
C
CPN
22
C
CPN
22
DC
C
TPN
23
C
TPN
23
DT
C
CPN
24
C
CPN
24
DC
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
3.96
0.50
106.80
110.76
B
B
B
O4'
C1'
C2'
DG
DG
DG
1
1
1
N
1
3.68
0.50
111.50
115.18
B
B
B
C5
C6
N1
DG
DG
DG
1
1
1
N
1
-3.64
0.50
129.30
125.66
B
B
B
N1
C2
N3
DA
DA
DA
2
2
2
N
1
-4.46
0.50
117.00
112.54
B
B
B
C4
C5
C6
DA
DA
DA
2
2
2
N
1
4.48
0.50
117.70
122.18
B
B
B
C5
C6
N1
DA
DA
DA
2
2
2
N
1
4.57
0.70
132.30
136.87
B
B
B
C6
C5
N7
DA
DA
DA
2
2
2
N
1
-7.24
0.60
118.60
111.36
B
B
B
N1
C6
N6
DA
DA
DA
2
2
2
N
1
-3.87
0.50
117.00
113.13
B
B
B
C4
C5
C6
DA
DA
DA
3
3
3
N
1
3.26
0.50
117.70
120.96
B
B
B
C5
C6
N1
DA
DA
DA
3
3
3
N
1
-5.16
0.60
118.60
113.44
B
B
B
N1
C6
N6
DA
DA
DA
3
3
3
N
1
3.56
0.50
111.50
115.06
B
B
B
C5
C6
N1
DG
DG
DG
4
4
4
N
1
-4.22
0.60
119.90
115.68
B
B
B
N1
C6
O6
DG
DG
DG
4
4
4
N
1
-4.89
0.70
102.20
97.31
B
B
B
C4'
C3'
C2'
DA
DA
DA
5
5
5
N
1
-4.70
0.50
117.00
112.30
B
B
B
C4
C5
C6
DA
DA
DA
5
5
5
N
1
5.12
0.50
117.70
122.82
B
B
B
C5
C6
N1
DA
DA
DA
5
5
5
N
1
-6.39
0.60
118.60
112.21
B
B
B
N1
C6
N6
DA
DA
DA
5
5
5
N
1
-4.51
0.70
102.20
97.69
B
B
B
C4'
C3'
C2'
DA
DA
DA
6
6
6
N
1
-3.60
0.50
129.30
125.70
B
B
B
N1
C2
N3
DA
DA
DA
6
6
6
N
1
-4.11
0.50
117.00
112.89
B
B
B
C4
C5
C6
DA
DA
DA
6
6
6
N
1
-5.39
0.60
118.60
113.21
B
B
B
N1
C6
N6
DA
DA
DA
6
6
6
N
1
-6.59
0.70
102.20
95.61
B
B
B
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
1
3.21
0.50
111.50
114.71
B
B
B
C5
C6
N1
DG
DG
DG
7
7
7
N
1
-3.77
0.60
119.90
116.13
B
B
B
N1
C6
O6
DG
DG
DG
7
7
7
N
1
-3.24
0.50
129.30
126.06
B
B
B
N1
C2
N3
DA
DA
DA
8
8
8
N
1
-3.26
0.50
117.00
113.74
B
B
B
C4
C5
C6
DA
DA
DA
8
8
8
N
1
3.14
0.50
117.70
120.84
B
B
B
C5
C6
N1
DA
DA
DA
8
8
8
N
1
9.01
1.20
119.70
128.71
B
B
B
C3'
O3'
P
DA
DA
DG
8
8
9
Y
1
-4.85
0.80
109.40
104.55
B
B
B
O5'
C5'
C4'
DG
DG
DG
9
9
9
N
1
-3.92
0.40
104.50
100.58
B
B
B
O4'
C4'
C3'
DG
DG
DG
9
9
9
N
1
3.06
0.30
108.30
111.36
B
B
B
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
3.85
0.60
123.90
127.75
B
B
B
N1
C2
N3
DG
DG
DG
9
9
9
N
1
3.19
0.50
111.50
114.69
B
B
B
C5
C6
N1
DG
DG
DG
9
9
9
N
1
-5.20
0.60
119.90
114.70
B
B
B
N1
C6
O6
DG
DG
DG
9
9
9
N
1
17.83
2.50
113.10
130.93
C
C
C
N
CA
C
GLY
GLY
GLY
11
11
11
N
1
7.21
1.10
109.80
117.01
D
D
D
C5'
C4'
O4'
DG
DG
DG
1
1
1
N
1
4.28
0.30
108.30
112.58
D
D
D
O4'
C1'
N9
DG
DG
DG
1
1
1
N
1
-3.86
0.50
129.30
125.44
D
D
D
N1
C2
N3
DA
DA
DA
2
2
2
N
1
-4.98
0.50
117.00
112.02
D
D
D
C4
C5
C6
DA
DA
DA
2
2
2
N
1
5.24
0.50
117.70
122.94
D
D
D
C5
C6
N1
DA
DA
DA
2
2
2
N
1
4.34
0.70
132.30
136.64
D
D
D
C6
C5
N7
DA
DA
DA
2
2
2
N
1
-7.91
0.60
118.60
110.69
D
D
D
N1
C6
N6
DA
DA
DA
2
2
2
N
1
-3.59
0.50
117.00
113.41
D
D
D
C4
C5
C6
DA
DA
DA
3
3
3
N
1
3.07
0.50
117.70
120.77
D
D
D
C5
C6
N1
DA
DA
DA
3
3
3
N
1
-4.90
0.60
118.60
113.70
D
D
D
N1
C6
N6
DA
DA
DA
3
3
3
N
1
-4.74
0.70
102.20
97.46
D
D
D
C4'
C3'
C2'
DA
DA
DA
5
5
5
N
1
-4.61
0.50
117.00
112.39
D
D
D
C4
C5
C6
DA
DA
DA
5
5
5
N
1
4.93
0.50
117.70
122.63
D
D
D
C5
C6
N1
DA
DA
DA
5
5
5
N
1
-6.31
0.60
118.60
112.29
D
D
D
N1
C6
N6
DA
DA
DA
5
5
5
N
1
-4.85
0.70
102.20
97.35
D
D
D
C4'
C3'
C2'
DA
DA
DA
6
6
6
N
1
-4.32
0.50
117.00
112.68
D
D
D
C4
C5
C6
DA
DA
DA
6
6
6
N
1
3.06
0.50
117.70
120.76
D
D
D
C5
C6
N1
DA
DA
DA
6
6
6
N
1
4.56
0.70
132.30
136.86
D
D
D
C6
C5
N7
DA
DA
DA
6
6
6
N
1
-5.73
0.60
118.60
112.87
D
D
D
N1
C6
N6
DA
DA
DA
6
6
6
N
1
-6.48
0.70
102.20
95.72
D
D
D
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
1
3.04
0.50
111.50
114.54
D
D
D
C5
C6
N1
DG
DG
DG
7
7
7
N
1
-4.75
0.60
119.90
115.15
D
D
D
N1
C6
O6
DG
DG
DG
7
7
7
N
1
-4.27
0.70
108.00
103.73
D
D
D
O4'
C1'
N9
DA
DA
DA
8
8
8
N
1
-4.00
0.50
117.00
113.00
D
D
D
C4
C5
C6
DA
DA
DA
8
8
8
N
1
4.63
0.50
117.70
122.33
D
D
D
C5
C6
N1
DA
DA
DA
8
8
8
N
1
-3.81
0.60
119.90
116.09
D
D
D
N1
C6
O6
DG
DG
DG
9
9
9
N
1
B
B
O3'
C3'
DG
DG
1
1
-0.044
0.006
1.419
1.375
N
1
B
B
O3'
C3'
DA
DA
6
6
-0.038
0.006
1.419
1.381
N
1
B
B
N1
C2
DG
DG
7
7
-0.053
0.008
1.373
1.320
N
1
B
B
C2
N2
DG
DG
7
7
-0.062
0.010
1.341
1.279
N
1
B
B
N1
C2
DG
DG
9
9
-0.071
0.008
1.373
1.302
N
1
B
B
C2
N2
DG
DG
9
9
-0.061
0.010
1.341
1.280
N
1
D
D
N1
C2
DG
DG
4
4
-0.060
0.008
1.373
1.313
N
1
D
D
C2
N2
DG
DG
4
4
-0.061
0.010
1.341
1.280
N
1
D
D
C6
N1
DA
DA
5
5
-0.043
0.007
1.351
1.308
N
1
D
D
N3
C4
DA
DA
6
6
0.042
0.006
1.344
1.386
N
1
D
D
N1
C2
DG
DG
7
7
-0.055
0.008
1.373
1.318
N
0.2350000
0.1870000
0.1870000
2.5
6.
6857
95.
1,2
2.
0.25
2.5
6.
35
1165
0
380
750
0.014
2.43
29.3
6.75
2.50
20.
1PNN
8374
1.
0.0430000
1,2
3.
93.
refinement
X-PLOR
3.1
data reduction
DENZO
PEPTIDE NUCLEIC ACID (PNA) COMPLEXED WITH DNA
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
covale
1.331
both
A
CPN
1
A
C
CPN
1
1_555
A
TPN
2
A
N
TPN
2
1_555
covale
1.331
both
A
TPN
2
A
C
TPN
2
1_555
A
CPN
3
A
N
CPN
3
1_555
covale
1.348
both
A
CPN
3
A
C
CPN
3
1_555
A
TPN
4
A
N
TPN
4
1_555
covale
1.324
one
A
TPN
4
A
C
TPN
4
1_555
A
IPN
5
A
N1'
IPN
5
1_555
covale
1.334
both
A
IPN
5
A
C'
IPN
5
1_555
A
CPN
6
A
N
CPN
6
1_555
covale
1.330
both
A
CPN
6
A
C
CPN
6
1_555
A
TPN
7
A
N
TPN
7
1_555
covale
1.334
both
A
TPN
7
A
C
TPN
7
1_555
A
TPN
8
A
N
TPN
8
1_555
covale
1.328
both
A
TPN
8
A
C
TPN
8
1_555
A
CPN
9
A
N
CPN
9
1_555
covale
1.352
both
A
CPN
9
A
C
CPN
9
1_555
A
HIS
10
A
N
HIS
10
1_555
covale
1.344
both
A
HIS
15
A
C
HIS
15
1_555
A
CPN
16
A
N
CPN
16
1_555
covale
1.331
both
A
CPN
16
A
C
CPN
16
1_555
A
TPN
17
A
N
TPN
17
1_555
covale
1.328
both
A
TPN
17
A
C
TPN
17
1_555
A
TPN
18
A
N
TPN
18
1_555
covale
1.314
both
A
TPN
18
A
C
TPN
18
1_555
A
CPN
19
A
N
CPN
19
1_555
covale
1.336
both
A
CPN
19
A
C
CPN
19
1_555
A
TPN
20
A
N
TPN
20
1_555
covale
1.323
both
A
TPN
20
A
C
TPN
20
1_555
A
TPN
21
A
N
TPN
21
1_555
covale
1.331
both
A
TPN
21
A
C
TPN
21
1_555
A
CPN
22
A
N
CPN
22
1_555
covale
1.324
both
A
CPN
22
A
C
CPN
22
1_555
A
TPN
23
A
N
TPN
23
1_555
covale
1.324
both
A
TPN
23
A
C
TPN
23
1_555
A
CPN
24
A
N
CPN
24
1_555
covale
1.329
both
C
CPN
1
C
C
CPN
1
1_555
C
TPN
2
C
N
TPN
2
1_555
covale
1.336
both
C
TPN
2
C
C
TPN
2
1_555
C
CPN
3
C
N
CPN
3
1_555
covale
1.327
both
C
CPN
3
C
C
CPN
3
1_555
C
TPN
4
C
N
TPN
4
1_555
covale
1.328
one
C
TPN
4
C
C
TPN
4
1_555
C
IPN
5
C
N1'
IPN
5
1_555
covale
1.334
both
C
IPN
5
C
C'
IPN
5
1_555
C
CPN
6
C
N
CPN
6
1_555
covale
1.329
both
C
CPN
6
C
C
CPN
6
1_555
C
TPN
7
C
N
TPN
7
1_555
covale
1.337
both
C
TPN
7
C
C
TPN
7
1_555
C
TPN
8
C
N
TPN
8
1_555
covale
1.325
both
C
TPN
8
C
C
TPN
8
1_555
C
CPN
9
C
N
CPN
9
1_555
covale
1.333
both
C
CPN
9
C
C
CPN
9
1_555
C
HIS
10
C
N
HIS
10
1_555
covale
1.323
both
C
HIS
15
C
C
HIS
15
1_555
C
CPN
16
C
N
CPN
16
1_555
covale
1.302
both
C
CPN
16
C
C
CPN
16
1_555
C
TPN
17
C
N
TPN
17
1_555
covale
1.312
both
C
TPN
17
C
C
TPN
17
1_555
C
TPN
18
C
N
TPN
18
1_555
covale
1.311
both
C
TPN
18
C
C
TPN
18
1_555
C
CPN
19
C
N
CPN
19
1_555
covale
1.323
both
C
CPN
19
C
C
CPN
19
1_555
C
TPN
20
C
N
TPN
20
1_555
covale
1.320
both
C
TPN
20
C
C
TPN
20
1_555
C
TPN
21
C
N
TPN
21
1_555
covale
1.332
both
C
TPN
21
C
C
TPN
21
1_555
C
CPN
22
C
N
CPN
22
1_555
covale
1.320
both
C
CPN
22
C
C
CPN
22
1_555
C
TPN
23
C
N
TPN
23
1_555
covale
1.327
both
C
TPN
23
C
C
TPN
23
1_555
C
CPN
24
C
N
CPN
24
1_555
hydrog
WATSON-CRICK
A
CPN
1
A
N3
CPN
1
1_555
B
DG
9
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
A
CPN
1
A
N4
CPN
1
1_555
B
DG
9
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
A
CPN
1
A
O2
CPN
1
1_555
B
DG
9
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
A
TPN
2
A
N3
TPN
2
1_555
B
DA
8
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
TPN
2
A
O4
TPN
2
1_555
B
DA
8
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
CPN
3
A
N3
CPN
3
1_555
B
DG
7
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
CPN
3
A
N4
CPN
3
1_555
B
DG
7
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
CPN
3
A
O2
CPN
3
1_555
B
DG
7
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
TPN
4
A
N3
TPN
4
1_555
B
DA
6
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
TPN
4
A
O4
TPN
4
1_555
B
DA
6
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
IPN
5
A
N3
IPN
5
1_555
B
DA
5
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
IPN
5
A
O4
IPN
5
1_555
B
DA
5
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
CPN
6
A
N3
CPN
6
1_555
B
DG
4
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
CPN
6
A
N4
CPN
6
1_555
B
DG
4
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
CPN
6
A
O2
CPN
6
1_555
B
DG
4
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
TPN
7
A
N3
TPN
7
1_555
B
DA
3
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
TPN
7
A
O4
TPN
7
1_555
B
DA
3
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
TPN
8
A
N3
TPN
8
1_555
B
DA
2
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
A
TPN
8
A
O4
TPN
8
1_555
B
DA
2
B
N6
DA
2
1_555
hydrog
WATSON-CRICK
A
CPN
9
A
N3
CPN
9
1_555
B
DG
1
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
CPN
9
A
N4
CPN
9
1_555
B
DG
1
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
CPN
9
A
O2
CPN
9
1_555
B
DG
1
B
N2
DG
1
1_555
hydrog
HOOGSTEEN
A
TPN
17
A
N3
TPN
17
1_555
B
DA
2
B
N7
DA
2
1_555
hydrog
HOOGSTEEN
A
TPN
17
A
O4
TPN
17
1_555
B
DA
2
B
N6
DA
2
1_555
hydrog
HOOGSTEEN
A
TPN
18
A
N3
TPN
18
1_555
B
DA
3
B
N7
DA
3
1_555
hydrog
HOOGSTEEN
A
TPN
18
A
O4
TPN
18
1_555
B
DA
3
B
N6
DA
3
1_555
hydrog
CPN-DG PAIR
A
CPN
19
A
N4
CPN
19
1_555
B
DG
4
B
O6
DG
4
1_555
hydrog
HOOGSTEEN
A
TPN
20
A
N3
TPN
20
1_555
B
DA
5
B
N7
DA
5
1_555
hydrog
HOOGSTEEN
A
TPN
20
A
O4
TPN
20
1_555
B
DA
5
B
N6
DA
5
1_555
hydrog
HOOGSTEEN
A
TPN
21
A
N3
TPN
21
1_555
B
DA
6
B
N7
DA
6
1_555
hydrog
HOOGSTEEN
A
TPN
21
A
O4
TPN
21
1_555
B
DA
6
B
N6
DA
6
1_555
hydrog
CPN-DG PAIR
A
CPN
22
A
N4
CPN
22
1_555
B
DG
7
B
O6
DG
7
1_555
hydrog
HOOGSTEEN
A
TPN
23
A
N3
TPN
23
1_555
B
DA
8
B
N7
DA
8
1_555
hydrog
HOOGSTEEN
A
TPN
23
A
O4
TPN
23
1_555
B
DA
8
B
N6
DA
8
1_555
hydrog
CPN-DG PAIR
A
CPN
24
A
N4
CPN
24
1_555
B
DG
9
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
C
CPN
1
C
N3
CPN
1
1_555
D
DG
9
D
N1
DG
9
1_555
hydrog
WATSON-CRICK
C
CPN
1
C
N4
CPN
1
1_555
D
DG
9
D
O6
DG
9
1_555
hydrog
WATSON-CRICK
C
CPN
1
C
O2
CPN
1
1_555
D
DG
9
D
N2
DG
9
1_555
hydrog
WATSON-CRICK
C
TPN
2
C
N3
TPN
2
1_555
D
DA
8
D
N1
DA
8
1_555
hydrog
WATSON-CRICK
C
TPN
2
C
O4
TPN
2
1_555
D
DA
8
D
N6
DA
8
1_555
hydrog
WATSON-CRICK
C
CPN
3
C
N3
CPN
3
1_555
D
DG
7
D
N1
DG
7
1_555
hydrog
WATSON-CRICK
C
CPN
3
C
N4
CPN
3
1_555
D
DG
7
D
O6
DG
7
1_555
hydrog
WATSON-CRICK
C
CPN
3
C
O2
CPN
3
1_555
D
DG
7
D
N2
DG
7
1_555
hydrog
WATSON-CRICK
C
TPN
4
C
N3
TPN
4
1_555
D
DA
6
D
N1
DA
6
1_555
hydrog
WATSON-CRICK
C
TPN
4
C
O4
TPN
4
1_555
D
DA
6
D
N6
DA
6
1_555
hydrog
WATSON-CRICK
C
IPN
5
C
N3
IPN
5
1_555
D
DA
5
D
N1
DA
5
1_555
hydrog
WATSON-CRICK
C
IPN
5
C
O4
IPN
5
1_555
D
DA
5
D
N6
DA
5
1_555
hydrog
WATSON-CRICK
C
CPN
6
C
N3
CPN
6
1_555
D
DG
4
D
N1
DG
4
1_555
hydrog
WATSON-CRICK
C
CPN
6
C
N4
CPN
6
1_555
D
DG
4
D
O6
DG
4
1_555
hydrog
WATSON-CRICK
C
CPN
6
C
O2
CPN
6
1_555
D
DG
4
D
N2
DG
4
1_555
hydrog
WATSON-CRICK
C
TPN
7
C
N3
TPN
7
1_555
D
DA
3
D
N1
DA
3
1_555
hydrog
WATSON-CRICK
C
TPN
7
C
O4
TPN
7
1_555
D
DA
3
D
N6
DA
3
1_555
hydrog
WATSON-CRICK
C
TPN
8
C
N3
TPN
8
1_555
D
DA
2
D
N1
DA
2
1_555
hydrog
WATSON-CRICK
C
TPN
8
C
O4
TPN
8
1_555
D
DA
2
D
N6
DA
2
1_555
hydrog
WATSON-CRICK
C
CPN
9
C
N3
CPN
9
1_555
D
DG
1
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
C
CPN
9
C
N4
CPN
9
1_555
D
DG
1
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
C
CPN
9
C
O2
CPN
9
1_555
D
DG
1
D
N2
DG
1
1_555
hydrog
CPN-DG PAIR
C
CPN
16
C
N4
CPN
16
1_555
D
DG
1
D
O6
DG
1
1_555
hydrog
HOOGSTEEN
C
TPN
17
C
N3
TPN
17
1_555
D
DA
2
D
N7
DA
2
1_555
hydrog
HOOGSTEEN
C
TPN
17
C
O4
TPN
17
1_555
D
DA
2
D
N6
DA
2
1_555
hydrog
HOOGSTEEN
C
TPN
18
C
N3
TPN
18
1_555
D
DA
3
D
N7
DA
3
1_555
hydrog
HOOGSTEEN
C
TPN
18
C
O4
TPN
18
1_555
D
DA
3
D
N6
DA
3
1_555
hydrog
CPN-DG PAIR
C
CPN
19
C
N4
CPN
19
1_555
D
DG
4
D
O6
DG
4
1_555
hydrog
HOOGSTEEN
C
TPN
20
C
N3
TPN
20
1_555
D
DA
5
D
N7
DA
5
1_555
hydrog
HOOGSTEEN
C
TPN
20
C
O4
TPN
20
1_555
D
DA
5
D
N6
DA
5
1_555
hydrog
HOOGSTEEN
C
TPN
21
C
N3
TPN
21
1_555
D
DA
6
D
N7
DA
6
1_555
hydrog
HOOGSTEEN
C
TPN
21
C
O4
TPN
21
1_555
D
DA
6
D
N6
DA
6
1_555
hydrog
CPN-DG PAIR
C
CPN
22
C
N4
CPN
22
1_555
D
DG
7
D
O6
DG
7
1_555
hydrog
HOOGSTEEN
C
TPN
23
C
N3
TPN
23
1_555
D
DA
8
D
N7
DA
8
1_555
hydrog
HOOGSTEEN
C
TPN
23
C
O4
TPN
23
1_555
D
DA
8
D
N6
DA
8
1_555
hydrog
CPN-DG PAIR
C
CPN
24
C
N4
CPN
24
1_555
D
DG
9
D
O6
DG
9
1_555
PEPTIDE NUCLEIC ACID/DNA
HAIRPIN PNA:DNA TRIPLEX, TRIPLEX WATSON-CRICK HOOGSTEEN, PEPTIDE NUCLEIC ACID-DNA COMPLEX
given
-0.545117
-0.361267
-0.756527
-0.305617
-0.754662
0.580589
-0.780670
0.547697
0.300969
55.79670
73.52600
1.51710
1PNN
PDB
1
1PNN
1PNN
PDB
2
1PNN
1
24
1PNN
1
24
1PNN
A
1
1
24
1
9
1PNN
1
9
1PNN
B
2
1
9
1
24
1PNN
1
24
1PNN
C
1
1
24
1
9
1PNN
1
9
1PNN
D
2
1
9
179
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