0.028902 0.000000 0.000000 0.000000 0.013605 0.000000 0.000000 0.000000 0.005507 0.00000 0.00000 0.00000 White, S.P. Scott, D.L. Otwinowski, Z. Sigler, P.B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 34.600 73.500 181.600 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C20 H45 N O8 P2 489.521 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Science SCIEAS 0038 0036-8075 250 1560 1563 2274787 Crystal structure of cobra-venom phospholipase A2 in a complex with a transition-state analogue. 1990 US Science SCIEAS 0038 0036-8075 250 1541 Interfacial Catalysis: The Mechanism of Phospholipase A2 1990 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 13154.642 PHOSPHOLIPASE A2 3.1.1.4 2 man polymer 40.078 CALCIUM ION 4 syn non-polymer 489.521 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE 2 syn non-polymer 18.015 water 242 nat water no no NLYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGCWPYFKTYSYECSQGTLTCKG GNNACAAAVCDCDRLAAICFAGAPYNDNDYNINLKARC NLYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGCWPYFKTYSYECSQGTLTCKG GNNACAAAVCDCDRLAAICFAGAPYNDNDYNINLKARC A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Chinese cobra Naja sample 8656 Naja atra 2.19 43.93 pdbx_database_status software struct_conn software repository Initial release Version format compliance Version format compliance Data collection Derived calculations Other Refinement description Data collection Refinement description 1 0 1993-10-31 1 1 2008-03-03 1 2 2011-07-13 1 3 2019-07-17 1 4 2019-08-14 _pdbx_database_status.process_site _software.classification _struct_conn.pdbx_leaving_atom_flag _software.classification Y BNL 1992-09-07 REL CA CALCIUM ION GEL 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE HOH water CA 801 2 CA CA 801 A CA 803 2 CA CA 803 A GEL 930 3 GEL GEL 930 A CA 802 2 CA CA 802 B CA 804 2 CA CA 804 B GEL 935 3 GEL GEL 935 B HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 405 4 HOH HOH 405 A HOH 406 4 HOH HOH 406 A HOH 407 4 HOH HOH 407 A HOH 408 4 HOH HOH 408 A HOH 409 4 HOH HOH 409 A HOH 410 4 HOH HOH 410 A HOH 411 4 HOH HOH 411 A HOH 412 4 HOH HOH 412 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 415 4 HOH HOH 415 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 425 4 HOH HOH 425 A HOH 426 4 HOH HOH 426 A HOH 429 4 HOH HOH 429 A HOH 430 4 HOH HOH 430 A HOH 440 4 HOH HOH 440 A HOH 442 4 HOH HOH 442 A HOH 443 4 HOH HOH 443 A HOH 444 4 HOH HOH 444 A HOH 445 4 HOH HOH 445 A HOH 446 4 HOH HOH 446 A HOH 447 4 HOH HOH 447 A HOH 448 4 HOH HOH 448 A HOH 450 4 HOH HOH 450 A HOH 451 4 HOH HOH 451 A HOH 452 4 HOH HOH 452 A HOH 453 4 HOH HOH 453 A HOH 454 4 HOH HOH 454 A HOH 455 4 HOH HOH 455 A HOH 456 4 HOH HOH 456 A HOH 457 4 HOH HOH 457 A HOH 458 4 HOH HOH 458 A HOH 459 4 HOH HOH 459 A HOH 460 4 HOH HOH 460 A HOH 461 4 HOH HOH 461 A HOH 524 4 HOH HOH 524 A HOH 525 4 HOH HOH 525 A HOH 526 4 HOH HOH 526 A HOH 527 4 HOH HOH 527 A HOH 528 4 HOH HOH 528 A HOH 531 4 HOH HOH 531 A HOH 532 4 HOH HOH 532 A HOH 533 4 HOH HOH 533 A HOH 534 4 HOH HOH 534 A HOH 535 4 HOH HOH 535 A HOH 536 4 HOH HOH 536 A HOH 539 4 HOH HOH 539 A HOH 540 4 HOH HOH 540 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 543 4 HOH HOH 543 A HOH 560 4 HOH HOH 560 A HOH 561 4 HOH HOH 561 A HOH 562 4 HOH HOH 562 A HOH 563 4 HOH HOH 563 A HOH 564 4 HOH HOH 564 A HOH 565 4 HOH HOH 565 A HOH 566 4 HOH HOH 566 A HOH 571 4 HOH HOH 571 A HOH 572 4 HOH HOH 572 A HOH 573 4 HOH HOH 573 A HOH 574 4 HOH HOH 574 A HOH 576 4 HOH HOH 576 A HOH 577 4 HOH HOH 577 A HOH 578 4 HOH HOH 578 A HOH 579 4 HOH HOH 579 A HOH 580 4 HOH HOH 580 A HOH 581 4 HOH HOH 581 A HOH 582 4 HOH HOH 582 A HOH 583 4 HOH HOH 583 A HOH 584 4 HOH HOH 584 A HOH 585 4 HOH HOH 585 A HOH 586 4 HOH HOH 586 A HOH 587 4 HOH HOH 587 A HOH 588 4 HOH HOH 588 A HOH 592 4 HOH HOH 592 A HOH 593 4 HOH HOH 593 A HOH 595 4 HOH HOH 595 A HOH 596 4 HOH HOH 596 A HOH 597 4 HOH HOH 597 A HOH 598 4 HOH HOH 598 A HOH 599 4 HOH HOH 599 A HOH 600 4 HOH HOH 600 A HOH 601 4 HOH HOH 601 A HOH 602 4 HOH HOH 602 A HOH 603 4 HOH HOH 603 A HOH 604 4 HOH HOH 604 A HOH 605 4 HOH HOH 605 A HOH 606 4 HOH HOH 606 A HOH 607 4 HOH HOH 607 A HOH 608 4 HOH HOH 608 A HOH 609 4 HOH HOH 609 A HOH 610 4 HOH HOH 610 A HOH 611 4 HOH HOH 611 A HOH 612 4 HOH HOH 612 A HOH 613 4 HOH HOH 613 A HOH 614 4 HOH HOH 614 A HOH 615 4 HOH HOH 615 A HOH 616 4 HOH HOH 616 A HOH 617 4 HOH HOH 617 A HOH 618 4 HOH HOH 618 A HOH 619 4 HOH HOH 619 A HOH 638 4 HOH HOH 638 A HOH 651 4 HOH HOH 651 A HOH 652 4 HOH HOH 652 A HOH 653 4 HOH HOH 653 A HOH 654 4 HOH HOH 654 A HOH 655 4 HOH HOH 655 A HOH 656 4 HOH HOH 656 A HOH 657 4 HOH HOH 657 A HOH 658 4 HOH HOH 658 A HOH 659 4 HOH HOH 659 A HOH 660 4 HOH HOH 660 A HOH 661 4 HOH HOH 661 A HOH 662 4 HOH HOH 662 A HOH 663 4 HOH HOH 663 A HOH 664 4 HOH HOH 664 A HOH 701 4 HOH HOH 701 A HOH 704 4 HOH HOH 704 A HOH 705 4 HOH HOH 705 A HOH 706 4 HOH HOH 706 A HOH 707 4 HOH HOH 707 A HOH 708 4 HOH HOH 708 A HOH 709 4 HOH HOH 709 A HOH 710 4 HOH HOH 710 A HOH 711 4 HOH HOH 711 A HOH 712 4 HOH HOH 712 A HOH 714 4 HOH HOH 714 A HOH 715 4 HOH HOH 715 A HOH 401 4 HOH HOH 401 B HOH 462 4 HOH HOH 462 B HOH 463 4 HOH HOH 463 B HOH 464 4 HOH HOH 464 B HOH 465 4 HOH HOH 465 B HOH 477 4 HOH HOH 477 B HOH 478 4 HOH HOH 478 B HOH 479 4 HOH HOH 479 B HOH 480 4 HOH HOH 480 B HOH 481 4 HOH HOH 481 B HOH 482 4 HOH HOH 482 B HOH 483 4 HOH HOH 483 B HOH 484 4 HOH HOH 484 B HOH 485 4 HOH HOH 485 B HOH 486 4 HOH HOH 486 B HOH 487 4 HOH HOH 487 B HOH 488 4 HOH HOH 488 B HOH 489 4 HOH HOH 489 B HOH 491 4 HOH HOH 491 B HOH 492 4 HOH HOH 492 B HOH 493 4 HOH HOH 493 B HOH 494 4 HOH HOH 494 B HOH 495 4 HOH HOH 495 B HOH 496 4 HOH HOH 496 B HOH 497 4 HOH HOH 497 B HOH 499 4 HOH HOH 499 B HOH 500 4 HOH HOH 500 B HOH 501 4 HOH HOH 501 B HOH 502 4 HOH HOH 502 B HOH 503 4 HOH HOH 503 B HOH 504 4 HOH HOH 504 B HOH 505 4 HOH HOH 505 B HOH 506 4 HOH HOH 506 B HOH 507 4 HOH HOH 507 B HOH 508 4 HOH HOH 508 B HOH 509 4 HOH HOH 509 B HOH 510 4 HOH HOH 510 B HOH 511 4 HOH HOH 511 B HOH 512 4 HOH HOH 512 B HOH 513 4 HOH HOH 513 B HOH 514 4 HOH HOH 514 B HOH 516 4 HOH HOH 516 B HOH 517 4 HOH HOH 517 B HOH 518 4 HOH HOH 518 B HOH 519 4 HOH HOH 519 B HOH 520 4 HOH HOH 520 B HOH 521 4 HOH HOH 521 B HOH 522 4 HOH HOH 522 B HOH 537 4 HOH HOH 537 B HOH 538 4 HOH HOH 538 B HOH 544 4 HOH HOH 544 B HOH 545 4 HOH HOH 545 B HOH 546 4 HOH HOH 546 B HOH 547 4 HOH HOH 547 B HOH 548 4 HOH HOH 548 B HOH 549 4 HOH HOH 549 B HOH 550 4 HOH HOH 550 B HOH 551 4 HOH HOH 551 B HOH 553 4 HOH HOH 553 B HOH 554 4 HOH HOH 554 B HOH 555 4 HOH HOH 555 B HOH 556 4 HOH HOH 556 B HOH 557 4 HOH HOH 557 B HOH 558 4 HOH HOH 558 B HOH 559 4 HOH HOH 559 B HOH 567 4 HOH HOH 567 B HOH 589 4 HOH HOH 589 B HOH 590 4 HOH HOH 590 B HOH 591 4 HOH HOH 591 B HOH 594 4 HOH HOH 594 B HOH 631 4 HOH HOH 631 B HOH 632 4 HOH HOH 632 B HOH 633 4 HOH HOH 633 B HOH 634 4 HOH HOH 634 B HOH 635 4 HOH HOH 635 B HOH 636 4 HOH HOH 636 B HOH 637 4 HOH HOH 637 B HOH 639 4 HOH HOH 639 B HOH 640 4 HOH HOH 640 B HOH 641 4 HOH HOH 641 B HOH 642 4 HOH HOH 642 B HOH 643 4 HOH HOH 643 B HOH 644 4 HOH HOH 644 B HOH 645 4 HOH HOH 645 B HOH 646 4 HOH HOH 646 B HOH 647 4 HOH HOH 647 B HOH 648 4 HOH HOH 648 B HOH 649 4 HOH HOH 649 B HOH 650 4 HOH HOH 650 B HOH 671 4 HOH HOH 671 B HOH 672 4 HOH HOH 672 B HOH 673 4 HOH HOH 673 B HOH 674 4 HOH HOH 674 B HOH 675 4 HOH HOH 675 B HOH 677 4 HOH HOH 677 B HOH 678 4 HOH HOH 678 B HOH 679 4 HOH HOH 679 B HOH 681 4 HOH HOH 681 B HOH 682 4 HOH HOH 682 B HOH 683 4 HOH HOH 683 B HOH 713 4 HOH HOH 713 B ASN 1 n 1 ASN 1 A LEU 2 n 2 LEU 2 A TYR 3 n 3 TYR 3 A GLN 4 n 4 GLN 4 A PHE 5 n 5 PHE 5 A LYS 6 n 6 LYS 6 A ASN 7 n 7 ASN 7 A MET 8 n 8 MET 8 A ILE 9 n 9 ILE 9 A GLN 10 n 10 GLN 10 A CYS 11 n 11 CYS 11 A THR 12 n 12 THR 12 A VAL 13 n 13 VAL 13 A PRO 14 n 14 PRO 14 A SER 15 n 15 SER 15 A ARG 16 n 16 ARG 16 A SER 17 n 17 SER 17 A TRP 18 n 18 TRP 18 A TRP 19 n 19 TRP 19 A ASP 20 n 20 ASP 20 A PHE 21 n 21 PHE 21 A ALA 22 n 22 ALA 22 A ASP 23 n 23 ASP 23 A TYR 24 n 24 TYR 24 A GLY 25 n 25 GLY 25 A CYS 26 n 26 CYS 26 A TYR 27 n 27 TYR 27 A CYS 28 n 28 CYS 28 A GLY 29 n 29 GLY 29 A ARG 30 n 30 ARG 30 A GLY 31 n 31 GLY 31 A GLY 32 n 32 GLY 32 A SER 33 n 33 SER 33 A GLY 34 n 34 GLY 34 A THR 35 n 35 THR 35 A PRO 36 n 36 PRO 36 A VAL 37 n 37 VAL 37 A ASP 38 n 38 ASP 38 A ASP 39 n 39 ASP 39 A LEU 40 n 40 LEU 40 A ASP 41 n 41 ASP 41 A ARG 42 n 42 ARG 42 A CYS 43 n 43 CYS 43 A CYS 44 n 44 CYS 44 A GLN 45 n 45 GLN 45 A VAL 46 n 46 VAL 46 A HIS 47 n 47 HIS 47 A ASP 48 n 48 ASP 48 A ASN 49 n 49 ASN 49 A CYS 50 n 50 CYS 50 A TYR 51 n 51 TYR 51 A ASN 52 n 52 ASN 52 A GLU 53 n 53 GLU 53 A ALA 54 n 54 ALA 54 A GLU 55 n 55 GLU 55 A LYS 56 n 56 LYS 56 A ILE 57 n 57 ILE 57 A SER 58 n 58 SER 58 A GLY 59 n 59 GLY 59 A CYS 60 n 60 CYS 60 A TRP 61 n 61 TRP 61 A PRO 62 n 62 PRO 62 A TYR 63 n 63 TYR 63 A PHE 64 n 64 PHE 64 A LYS 65 n 65 LYS 65 A THR 66 n 66 THR 66 A TYR 67 n 67 TYR 67 A SER 68 n 68 SER 68 A TYR 69 n 69 TYR 69 A GLU 70 n 70 GLU 70 A CYS 71 n 71 CYS 71 A SER 72 n 72 SER 72 A GLN 73 n 73 GLN 73 A GLY 74 n 74 GLY 74 A THR 75 n 75 THR 75 A LEU 76 n 76 LEU 76 A THR 77 n 77 THR 77 A CYS 78 n 78 CYS 78 A LYS 79 n 79 LYS 79 A GLY 80 n 80 GLY 80 A GLY 81 n 81 GLY 81 A ASN 82 n 82 ASN 82 A ASN 83 n 83 ASN 83 A ALA 84 n 84 ALA 84 A CYS 85 n 85 CYS 85 A ALA 86 n 86 ALA 86 A ALA 87 n 87 ALA 87 A ALA 88 n 88 ALA 88 A VAL 89 n 89 VAL 89 A CYS 90 n 90 CYS 90 A ASP 91 n 91 ASP 91 A CYS 92 n 92 CYS 92 A ASP 93 n 93 ASP 93 A ARG 94 n 94 ARG 94 A LEU 95 n 95 LEU 95 A ALA 96 n 96 ALA 96 A ALA 97 n 97 ALA 97 A ILE 98 n 98 ILE 98 A CYS 99 n 99 CYS 99 A PHE 100 n 100 PHE 100 A ALA 101 n 101 ALA 101 A GLY 102 n 102 GLY 102 A ALA 103 n 103 ALA 103 A PRO 104 n 104 PRO 104 A TYR 105 n 105 TYR 105 A ASN 106 n 106 ASN 106 A ASP 107 n 107 ASP 107 A ASN 108 n 108 ASN 108 A ASP 109 n 109 ASP 109 A TYR 110 n 110 TYR 110 A ASN 111 n 111 ASN 111 A ILE 112 n 112 ILE 112 A ASN 113 n 113 ASN 113 A LEU 114 n 114 LEU 114 A LYS 115 n 115 LYS 115 A ALA 116 n 116 ALA 116 A ARG 117 n 117 ARG 117 A CYS 118 n 118 CYS 118 A ASN 1 n 1 ASN 1 B LEU 2 n 2 LEU 2 B TYR 3 n 3 TYR 3 B GLN 4 n 4 GLN 4 B PHE 5 n 5 PHE 5 B LYS 6 n 6 LYS 6 B ASN 7 n 7 ASN 7 B MET 8 n 8 MET 8 B ILE 9 n 9 ILE 9 B GLN 10 n 10 GLN 10 B CYS 11 n 11 CYS 11 B THR 12 n 12 THR 12 B VAL 13 n 13 VAL 13 B PRO 14 n 14 PRO 14 B SER 15 n 15 SER 15 B ARG 16 n 16 ARG 16 B SER 17 n 17 SER 17 B TRP 18 n 18 TRP 18 B TRP 19 n 19 TRP 19 B ASP 20 n 20 ASP 20 B PHE 21 n 21 PHE 21 B ALA 22 n 22 ALA 22 B ASP 23 n 23 ASP 23 B TYR 24 n 24 TYR 24 B GLY 25 n 25 GLY 25 B CYS 26 n 26 CYS 26 B TYR 27 n 27 TYR 27 B CYS 28 n 28 CYS 28 B GLY 29 n 29 GLY 29 B ARG 30 n 30 ARG 30 B GLY 31 n 31 GLY 31 B GLY 32 n 32 GLY 32 B SER 33 n 33 SER 33 B GLY 34 n 34 GLY 34 B THR 35 n 35 THR 35 B PRO 36 n 36 PRO 36 B VAL 37 n 37 VAL 37 B ASP 38 n 38 ASP 38 B ASP 39 n 39 ASP 39 B LEU 40 n 40 LEU 40 B ASP 41 n 41 ASP 41 B ARG 42 n 42 ARG 42 B CYS 43 n 43 CYS 43 B CYS 44 n 44 CYS 44 B GLN 45 n 45 GLN 45 B VAL 46 n 46 VAL 46 B HIS 47 n 47 HIS 47 B ASP 48 n 48 ASP 48 B ASN 49 n 49 ASN 49 B CYS 50 n 50 CYS 50 B TYR 51 n 51 TYR 51 B ASN 52 n 52 ASN 52 B GLU 53 n 53 GLU 53 B ALA 54 n 54 ALA 54 B GLU 55 n 55 GLU 55 B LYS 56 n 56 LYS 56 B ILE 57 n 57 ILE 57 B SER 58 n 58 SER 58 B GLY 59 n 59 GLY 59 B CYS 60 n 60 CYS 60 B TRP 61 n 61 TRP 61 B PRO 62 n 62 PRO 62 B TYR 63 n 63 TYR 63 B PHE 64 n 64 PHE 64 B LYS 65 n 65 LYS 65 B THR 66 n 66 THR 66 B TYR 67 n 67 TYR 67 B SER 68 n 68 SER 68 B TYR 69 n 69 TYR 69 B GLU 70 n 70 GLU 70 B CYS 71 n 71 CYS 71 B SER 72 n 72 SER 72 B GLN 73 n 73 GLN 73 B GLY 74 n 74 GLY 74 B THR 75 n 75 THR 75 B LEU 76 n 76 LEU 76 B THR 77 n 77 THR 77 B CYS 78 n 78 CYS 78 B LYS 79 n 79 LYS 79 B GLY 80 n 80 GLY 80 B GLY 81 n 81 GLY 81 B ASN 82 n 82 ASN 82 B ASN 83 n 83 ASN 83 B ALA 84 n 84 ALA 84 B CYS 85 n 85 CYS 85 B ALA 86 n 86 ALA 86 B ALA 87 n 87 ALA 87 B ALA 88 n 88 ALA 88 B VAL 89 n 89 VAL 89 B CYS 90 n 90 CYS 90 B ASP 91 n 91 ASP 91 B CYS 92 n 92 CYS 92 B ASP 93 n 93 ASP 93 B ARG 94 n 94 ARG 94 B LEU 95 n 95 LEU 95 B ALA 96 n 96 ALA 96 B ALA 97 n 97 ALA 97 B ILE 98 n 98 ILE 98 B CYS 99 n 99 CYS 99 B PHE 100 n 100 PHE 100 B ALA 101 n 101 ALA 101 B GLY 102 n 102 GLY 102 B ALA 103 n 103 ALA 103 B PRO 104 n 104 PRO 104 B TYR 105 n 105 TYR 105 B ASN 106 n 106 ASN 106 B ASP 107 n 107 ASP 107 B ASN 108 n 108 ASN 108 B ASP 109 n 109 ASP 109 B TYR 110 n 110 TYR 110 B ASN 111 n 111 ASN 111 B ILE 112 n 112 ILE 112 B ASN 113 n 113 ASN 113 B LEU 114 n 114 LEU 114 B LYS 115 n 115 LYS 115 B ALA 116 n 116 ALA 116 B ARG 117 n 117 ARG 117 B CYS 118 n 118 CYS 118 B author_defined_assembly 2 dimeric A ASP 48 A OD2 ASP 48 1_555 A CA 801 C CA CA 1_555 A GEL 930 E O4P GEL 1_555 89.1 A ASP 48 A OD2 ASP 48 1_555 A CA 801 C CA CA 1_555 A GEL 930 E O2P GEL 1_555 131.4 A GEL 930 E O4P GEL 1_555 A CA 801 C CA CA 1_555 A GEL 930 E O2P GEL 1_555 101.3 A ASP 48 A OD2 ASP 48 1_555 A CA 801 C CA CA 1_555 A TYR 27 A O TYR 27 1_555 102.5 A GEL 930 E O4P GEL 1_555 A CA 801 C CA CA 1_555 A TYR 27 A O TYR 27 1_555 160.2 A GEL 930 E O2P GEL 1_555 A CA 801 C CA CA 1_555 A TYR 27 A O TYR 27 1_555 83.1 A ASP 48 A OD2 ASP 48 1_555 A CA 801 C CA CA 1_555 A GLY 31 A O GLY 31 1_555 77.3 A GEL 930 E O4P GEL 1_555 A CA 801 C CA CA 1_555 A GLY 31 A O GLY 31 1_555 82.1 A GEL 930 E O2P GEL 1_555 A CA 801 C CA CA 1_555 A GLY 31 A O GLY 31 1_555 150.7 A TYR 27 A O TYR 27 1_555 A CA 801 C CA CA 1_555 A GLY 31 A O GLY 31 1_555 84.9 A ASP 48 A OD2 ASP 48 1_555 A CA 801 C CA CA 1_555 A GLY 29 A O GLY 29 1_555 150.6 A GEL 930 E O4P GEL 1_555 A CA 801 C CA CA 1_555 A GLY 29 A O GLY 29 1_555 72.3 A GEL 930 E O2P GEL 1_555 A CA 801 C CA CA 1_555 A GLY 29 A O GLY 29 1_555 75.9 A TYR 27 A O TYR 27 1_555 A CA 801 C CA CA 1_555 A GLY 29 A O GLY 29 1_555 90.4 A GLY 31 A O GLY 31 1_555 A CA 801 C CA CA 1_555 A GLY 29 A O GLY 29 1_555 77.6 A ASP 48 A OD2 ASP 48 1_555 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 56.0 A GEL 930 E O4P GEL 1_555 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 81.0 A GEL 930 E O2P GEL 1_555 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 78.7 A TYR 27 A O TYR 27 1_555 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 118.8 A GLY 31 A O GLY 31 1_555 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 130.2 A GLY 29 A O GLY 29 1_555 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 138.3 A TYR 24 A O TYR 24 1_555 A CA 803 D CA CA 1_555 A CYS 28 A O CYS 28 1_555 62.7 A TYR 24 A O TYR 24 1_555 A CA 803 D CA CA 1_555 A GLY 25 A O GLY 25 1_555 63.4 A CYS 28 A O CYS 28 1_555 A CA 803 D CA CA 1_555 A GLY 25 A O GLY 25 1_555 125.5 A TYR 24 A O TYR 24 1_555 A CA 803 D CA CA 1_555 A HOH 429 I O HOH 1_555 136.9 A CYS 28 A O CYS 28 1_555 A CA 803 D CA CA 1_555 A HOH 429 I O HOH 1_555 93.4 A GLY 25 A O GLY 25 1_555 A CA 803 D CA CA 1_555 A HOH 429 I O HOH 1_555 121.7 A TYR 24 A O TYR 24 1_555 A CA 803 D CA CA 1_555 A HOH 709 I O HOH 1_555 121.5 A CYS 28 A O CYS 28 1_555 A CA 803 D CA CA 1_555 A HOH 709 I O HOH 1_555 83.7 A GLY 25 A O GLY 25 1_555 A CA 803 D CA CA 1_555 A HOH 709 I O HOH 1_555 132.6 A HOH 429 I O HOH 1_555 A CA 803 D CA CA 1_555 A HOH 709 I O HOH 1_555 87.6 B GLY 29 B O GLY 29 1_555 B CA 802 F CA CA 1_555 B ASP 48 B OD1 ASP 48 1_555 144.4 B GLY 29 B O GLY 29 1_555 B CA 802 F CA CA 1_555 B GEL 935 H O2P GEL 1_555 80.5 B ASP 48 B OD1 ASP 48 1_555 B CA 802 F CA CA 1_555 B GEL 935 H O2P GEL 1_555 79.1 B GLY 29 B O GLY 29 1_555 B CA 802 F CA CA 1_555 B GEL 935 H O4P GEL 1_555 76.1 B ASP 48 B OD1 ASP 48 1_555 B CA 802 F CA CA 1_555 B GEL 935 H O4P GEL 1_555 80.5 B GEL 935 H O2P GEL 1_555 B CA 802 F CA CA 1_555 B GEL 935 H O4P GEL 1_555 103.1 B GLY 29 B O GLY 29 1_555 B CA 802 F CA CA 1_555 B TYR 27 B O TYR 27 1_555 93.5 B ASP 48 B OD1 ASP 48 1_555 B CA 802 F CA CA 1_555 B TYR 27 B O TYR 27 1_555 112.7 B GEL 935 H O2P GEL 1_555 B CA 802 F CA CA 1_555 B TYR 27 B O TYR 27 1_555 83.4 B GEL 935 H O4P GEL 1_555 B CA 802 F CA CA 1_555 B TYR 27 B O TYR 27 1_555 166.4 B GLY 29 B O GLY 29 1_555 B CA 802 F CA CA 1_555 B ASP 48 B OD2 ASP 48 1_555 145.7 B ASP 48 B OD1 ASP 48 1_555 B CA 802 F CA CA 1_555 B ASP 48 B OD2 ASP 48 1_555 55.7 B GEL 935 H O2P GEL 1_555 B CA 802 F CA CA 1_555 B ASP 48 B OD2 ASP 48 1_555 132.3 B GEL 935 H O4P GEL 1_555 B CA 802 F CA CA 1_555 B ASP 48 B OD2 ASP 48 1_555 85.2 B TYR 27 B O TYR 27 1_555 B CA 802 F CA CA 1_555 B ASP 48 B OD2 ASP 48 1_555 99.3 B GLY 29 B O GLY 29 1_555 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 78.3 B ASP 48 B OD1 ASP 48 1_555 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 125.4 B GEL 935 H O2P GEL 1_555 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 155.5 B GEL 935 H O4P GEL 1_555 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 83.7 B TYR 27 B O TYR 27 1_555 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 85.5 B ASP 48 B OD2 ASP 48 1_555 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 71.2 B TYR 24 B O TYR 24 1_555 B CA 804 G CA CA 1_555 B GLY 25 B O GLY 25 1_555 62.6 B TYR 24 B O TYR 24 1_555 B CA 804 G CA CA 1_555 B HOH 481 J O HOH 1_555 146.3 B GLY 25 B O GLY 25 1_555 B CA 804 G CA CA 1_555 B HOH 481 J O HOH 1_555 119.4 B TYR 24 B O TYR 24 1_555 B CA 804 G CA CA 1_555 B CYS 28 B O CYS 28 1_555 67.1 B GLY 25 B O GLY 25 1_555 B CA 804 G CA CA 1_555 B CYS 28 B O CYS 28 1_555 127.9 B HOH 481 J O HOH 1_555 B CA 804 G CA CA 1_555 B CYS 28 B O CYS 28 1_555 95.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 72 A N SER 72 A O THR 75 A O THR 75 B N SER 72 B N SER 72 B O THR 75 B O THR 75 1 B B NE2 O GLN HOH 10 500 1.26 1 A A ND2 O ASN HOH 52 711 1.99 1 B B OE1 O GLN HOH 10 499 2.00 1 B B O OE2 ASN GLU 49 53 2.06 1 A A O O HOH HOH 419 651 2.08 1 B B CD O GLN HOH 10 500 2.09 1 13.96 2.30 115.30 129.26 A A A CA CB CG LEU LEU LEU 2 2 2 N 1 49.23 2.60 111.60 160.83 A A A CB CG CD GLN GLN GLN 10 10 10 N 1 9.87 1.40 123.60 133.47 A A A CD NE CZ ARG ARG ARG 16 16 16 N 1 5.61 0.50 120.30 125.91 A A A NE CZ NH1 ARG ARG ARG 16 16 16 N 1 3.26 0.50 120.30 123.56 A A A NE CZ NH1 ARG ARG ARG 30 30 30 N 1 4.06 0.50 120.30 124.36 A A A NE CZ NH1 ARG ARG ARG 42 42 42 N 1 12.55 1.70 111.00 123.55 A A A CB CG CD1 LEU LEU LEU 76 76 76 N 1 19.23 1.70 111.00 130.23 A A A CB CG CD2 LEU LEU LEU 76 76 76 N 1 3.99 0.50 120.30 124.29 A A A NE CZ NH1 ARG ARG ARG 94 94 94 N 1 -24.20 2.20 113.40 89.20 B B B CA CB CG GLN GLN GLN 10 10 10 N 1 4.90 0.50 120.30 125.20 B B B NE CZ NH1 ARG ARG ARG 16 16 16 N 1 -15.70 1.80 114.00 98.30 B B B CA CB SG CYS CYS CYS 28 28 28 N 1 3.50 0.50 120.30 123.80 B B B NE CZ NH2 ARG ARG ARG 30 30 30 N 1 13.30 1.40 123.60 136.90 B B B CD NE CZ ARG ARG ARG 42 42 42 N 1 4.98 0.50 120.30 125.28 B B B NE CZ NH1 ARG ARG ARG 42 42 42 N 1 12.28 1.50 110.90 123.18 B B B CA CB CG1 VAL VAL VAL 89 89 89 N 1 3.31 0.50 120.30 123.61 B B B NE CZ NH2 ARG ARG ARG 94 94 94 N 1 A A CA CB GLY PHE 59 64 0.46 1_555 3_555 1 A A CB NE1 TRP TRP 61 61 0.54 1_555 3_555 1 A A CG CG TRP TRP 61 61 0.63 1_555 3_555 1 A A CZ OH TYR TYR 3 3 0.81 1_555 3_655 1 A A CE2 O PHE HOH 64 607 0.96 1_555 3_555 1 A A CB CD1 TRP TRP 61 61 1.08 1_555 3_555 1 A A CG CD1 TRP TRP 61 61 1.09 1_555 3_555 1 A A CZ O PHE HOH 64 607 1.16 1_555 3_555 1 A A CE1 OH TYR TYR 3 3 1.17 1_555 3_655 1 A A CZ CZ TYR TYR 3 3 1.18 1_555 3_655 1 A A N CB GLY PHE 59 64 1.30 1_555 3_555 1 A A N CG GLY PHE 59 64 1.33 1_555 3_555 1 A A O O HOH HOH 417 454 1.35 1_555 3_555 1 A A CD2 O PHE HOH 64 607 1.35 1_555 3_555 1 A A CH2 O TRP HOH 61 612 1.43 1_555 3_555 1 A A CD2 CD2 TRP TRP 61 61 1.53 1_555 3_555 1 A A CB CE2 TRP TRP 61 61 1.54 1_555 3_555 1 A A CG CD2 TRP TRP 61 61 1.55 1_555 3_555 1 A A CD1 CD1 TRP TRP 61 61 1.57 1_555 3_555 1 A A CE1 O PHE HOH 64 607 1.64 1_555 3_555 1 A A OH OH TYR TYR 3 3 1.66 1_555 3_655 1 A A N CD1 GLY PHE 59 64 1.66 1_555 3_555 1 A A CE1 CZ TYR TYR 3 3 1.75 1_555 3_655 1 A A CG O PHE HOH 64 607 1.79 1_555 3_555 1 A A CA CA GLY PHE 59 64 1.81 1_555 3_555 1 A A CA NE1 TRP TRP 61 61 1.84 1_555 3_555 1 A A CA CG GLY PHE 59 64 1.85 1_555 3_555 1 A A CE2 OH TYR TYR 3 3 1.89 1_555 3_655 1 A A CD1 O PHE HOH 64 607 1.90 1_555 3_555 1 A A CG NE1 TRP TRP 61 61 1.92 1_555 3_555 1 A A NZ NZ LYS LYS 65 65 1.93 1_555 3_555 1 A A CB CG TRP TRP 61 61 1.93 1_555 3_555 1 A A C CB GLY PHE 59 64 1.97 1_555 3_555 1 A A CE3 CE3 TRP TRP 61 61 2.02 1_555 3_555 1 A A CG CE2 TRP TRP 61 61 2.11 1_555 3_555 1 A A CD2 CE3 TRP TRP 61 61 2.11 1_555 3_555 1 A A CB CD2 TRP TRP 61 61 2.13 1_555 3_555 1 A A CZ2 O TRP HOH 61 419 2.16 1_555 3_555 1 A A CA CD1 TRP TRP 61 61 2.18 1_555 3_555 1 A GLN 73 69.71 -104.30 1 B ASP 23 -157.55 68.94 1 B GLN 73 29.41 82.24 0.179 0.179 2.0 1 2.0 242 2136 66 0 1828 0.014 2.30 model building X-PLOR refinement PROFFT refinement X-PLOR phasing X-PLOR PHOSPHOLIPASE A2 (E.C.3.1.1.4) COMPLEX WITH THE TRANSITION-STATE ANALOGUE CRYSTAL STRUCTURE OF COBRA-VENOM PHOSPHOLIPASE A2 IN A COMPLEX WITH A TRANSITION-STATE ANALOGUE 1 N N 1 N N 2 N N 2 N N 3 N N 2 N N 2 N N 3 N N 4 N N 4 N N A ASN 1 A ASN 1 HELX_P A PRO 14 A PRO 14 1 H1 14 A ASP 38 A ASP 38 HELX_P A ILE 57 A ILE 57 1 H2 20 A ASN 83 A ASN 83 HELX_P A ALA 103 A ALA 103 1 H3 21 A ASN 113 A ASN 113 HELX_P A CYS 118 A CYS 118 1 H4 6 B ASN 1 B ASN 1 HELX_P B PRO 14 B PRO 14 1 H5 14 B ASP 38 B ASP 38 HELX_P B ILE 57 B ILE 57 1 H6 20 B ASN 83 B ASN 83 HELX_P B ALA 103 B ALA 103 1 H7 21 B ASN 113 B ASN 113 HELX_P B CYS 118 B CYS 118 1 H8 6 disulf 2.161 A CYS 11 A SG CYS 11 1_555 A CYS 71 A SG CYS 71 1_555 disulf 2.000 A CYS 26 A SG CYS 26 1_555 A CYS 118 A SG CYS 118 1_555 disulf 1.836 A CYS 28 A SG CYS 28 1_555 A CYS 44 A SG CYS 44 1_555 disulf 1.909 A CYS 43 A SG CYS 43 1_555 A CYS 99 A SG CYS 99 1_555 disulf 2.004 A CYS 50 A SG CYS 50 1_555 A CYS 92 A SG CYS 92 1_555 disulf 2.070 A CYS 60 A SG CYS 60 1_555 A CYS 85 A SG CYS 85 1_555 disulf 2.044 A CYS 78 A SG CYS 78 1_555 A CYS 90 A SG CYS 90 1_555 disulf 1.990 B CYS 11 B SG CYS 11 1_555 B CYS 71 B SG CYS 71 1_555 disulf 2.037 B CYS 26 B SG CYS 26 1_555 B CYS 118 B SG CYS 118 1_555 disulf 1.591 B CYS 28 B SG CYS 28 1_555 B CYS 44 B SG CYS 44 1_555 disulf 2.320 B CYS 43 B SG CYS 43 1_555 B CYS 99 B SG CYS 99 1_555 disulf 2.266 B CYS 50 B SG CYS 50 1_555 B CYS 92 B SG CYS 92 1_555 disulf 1.592 B CYS 60 B SG CYS 60 1_555 B CYS 85 B SG CYS 85 1_555 covale 1.594 none A ASN 52 A ND2 ASN 52 1_555 A GEL 930 E N3 GEL 1_555 metalc 2.276 A CA 801 C CA CA 1_555 A ASP 48 A OD2 ASP 48 1_555 metalc 2.521 A CA 801 C CA CA 1_555 A GEL 930 E O4P GEL 1_555 metalc 2.390 A CA 801 C CA CA 1_555 A GEL 930 E O2P GEL 1_555 metalc 2.217 A CA 801 C CA CA 1_555 A TYR 27 A O TYR 27 1_555 metalc 2.522 A CA 801 C CA CA 1_555 A GLY 31 A O GLY 31 1_555 metalc 2.599 A CA 801 C CA CA 1_555 A GLY 29 A O GLY 29 1_555 metalc 2.459 A CA 801 C CA CA 1_555 A ASP 48 A OD1 ASP 48 1_555 metalc 3.349 A CA 803 D CA CA 1_555 A TYR 24 A O TYR 24 1_555 metalc 2.819 A CA 803 D CA CA 1_555 A CYS 28 A O CYS 28 1_555 metalc 2.903 A CA 803 D CA CA 1_555 A GLY 25 A O GLY 25 1_555 metalc 2.469 A CA 803 D CA CA 1_555 A HOH 429 I O HOH 1_555 metalc 3.080 A CA 803 D CA CA 1_555 A HOH 709 I O HOH 1_555 metalc 2.384 B CA 802 F CA CA 1_555 B GLY 29 B O GLY 29 1_555 metalc 2.414 B CA 802 F CA CA 1_555 B ASP 48 B OD1 ASP 48 1_555 metalc 2.377 B CA 802 F CA CA 1_555 B GEL 935 H O2P GEL 1_555 metalc 2.429 B CA 802 F CA CA 1_555 B GEL 935 H O4P GEL 1_555 metalc 2.260 B CA 802 F CA CA 1_555 B TYR 27 B O TYR 27 1_555 metalc 2.356 B CA 802 F CA CA 1_555 B ASP 48 B OD2 ASP 48 1_555 metalc 2.429 B CA 802 F CA CA 1_555 B GLY 31 B O GLY 31 1_555 metalc 3.236 B CA 804 G CA CA 1_555 B TYR 24 B O TYR 24 1_555 metalc 2.853 B CA 804 G CA CA 1_555 B GLY 25 B O GLY 25 1_555 metalc 2.962 B CA 804 G CA CA 1_555 B HOH 481 J O HOH 1_555 metalc 2.703 B CA 804 G CA CA 1_555 B CYS 28 B O CYS 28 1_555 HYDROLASE HYDROLASE PA21_NAJAT UNP 1 1 P00598 MTPAHLLILAAVCVSPLGASSNRPMPLNLYQFKNMIQCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNE AEKISGCWPYFKTYSYECSQGTLTCKGGNNACAAAVCDCDRLAAICFAGAPYNNNNYNIDLKARCQ 28 145 1POB 1 118 P00598 A 1 1 118 28 145 1POB 1 118 P00598 B 1 1 118 1 ASN CONFLICT ASP 107 1POB A P00598 UNP 134 107 1 ASN CONFLICT ASP 109 1POB A P00598 UNP 136 109 1 ASP CONFLICT ASN 113 1POB A P00598 UNP 140 113 2 ASN CONFLICT ASP 107 1POB B P00598 UNP 134 107 2 ASN CONFLICT ASP 109 1POB B P00598 UNP 136 109 2 ASP CONFLICT ASN 113 1POB B P00598 UNP 140 113 2 2 anti-parallel anti-parallel A TYR 69 A TYR 69 A SER 72 A SER 72 A THR 75 A THR 75 A CYS 78 A CYS 78 B TYR 69 B TYR 69 B SER 72 B SER 72 B THR 75 B THR 75 B CYS 78 B CYS 78 Unknown 4 Unknown 3 Unknown 4 Unknown 3 BINDING SITE FOR RESIDUE CA A 801 Software 5 BINDING SITE FOR RESIDUE CA B 802 Software 5 BINDING SITE FOR RESIDUE CA A 803 Software 5 BINDING SITE FOR RESIDUE CA B 804 Software 4 BINDING SITE FOR RESIDUE GEL A 930 Software 15 BINDING SITE FOR RESIDUE GEL B 935 Software 17 A CYS 28 A CYS 28 4 1_555 A ARG 30 A ARG 30 4 1_555 A GLY 32 A GLY 32 4 1_555 A ASN 49 A ASN 49 4 1_555 A TYR 24 A TYR 24 3 1_555 A GLY 25 A GLY 25 3 1_555 A CYS 28 A CYS 28 3 1_555 B CYS 28 B CYS 28 4 1_555 B ARG 30 B ARG 30 4 1_555 B GLY 32 B GLY 32 4 1_555 B ASN 49 B ASN 49 4 1_555 B TYR 24 B TYR 24 3 1_555 B GLY 25 B GLY 25 3 1_555 B CYS 28 B CYS 28 3 1_555 A TYR 27 A TYR 27 5 1_555 A GLY 29 A GLY 29 5 1_555 A GLY 31 A GLY 31 5 1_555 A ASP 48 A ASP 48 5 1_555 A GEL 930 E GEL 5 1_555 B TYR 27 B TYR 27 5 1_555 B GLY 29 B GLY 29 5 1_555 B GLY 31 B GLY 31 5 1_555 B ASP 48 B ASP 48 5 1_555 B GEL 935 H GEL 5 1_555 A TYR 24 A TYR 24 5 1_555 A GLY 25 A GLY 25 5 1_555 A CYS 28 A CYS 28 5 1_555 A HOH 429 I HOH 5 1_555 A HOH 709 I HOH 5 1_555 B TYR 24 B TYR 24 4 1_555 B GLY 25 B GLY 25 4 1_555 B CYS 28 B CYS 28 4 1_555 B HOH 481 J HOH 4 1_555 A LEU 2 A LEU 2 15 1_555 A TRP 18 A TRP 18 15 1_555 A PHE 21 A PHE 21 15 1_555 A TYR 27 A TYR 27 15 1_555 A GLY 29 A GLY 29 15 1_555 A ARG 30 A ARG 30 15 1_555 A GLY 31 A GLY 31 15 1_555 A CYS 44 A CYS 44 15 1_555 A HIS 47 A HIS 47 15 1_555 A ASP 48 A ASP 48 15 1_555 A ASN 52 A ASN 52 15 1_555 A TYR 63 A TYR 63 15 1_555 A HOH 421 I HOH 15 1_555 A HOH 711 I HOH 15 1_555 A CA 801 C CA 15 1_555 B LEU 2 B LEU 2 17 1_555 B LEU 2 B LEU 2 17 4_565 B LYS 6 B LYS 6 17 1_555 B ILE 9 B ILE 9 17 1_555 B TRP 18 B TRP 18 17 1_555 B TYR 27 B TYR 27 17 1_555 B GLY 29 B GLY 29 17 1_555 B GLY 31 B GLY 31 17 1_555 B CYS 44 B CYS 44 17 1_555 B HIS 47 B HIS 47 17 1_555 B ASP 48 B ASP 48 17 1_555 B TYR 51 B TYR 51 17 1_555 B ASN 52 B ASN 52 17 1_555 B TYR 63 B TYR 63 17 1_555 B TYR 63 B TYR 63 17 4_565 B PHE 64 B PHE 64 17 4_565 B CA 802 F CA 17 1_555 20 C 2 2 21