1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Donadini, R.
Liew, C.W.
Kwan, A.H.
Mackay, J.P.
Fields, B.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
12
145
156
10.1016/j.str.2003.12.002
14725774
Crystal and Solution Structures of a Superantigen from Yersinia pseudotuberculosis Reveal a Jelly-Roll Fold.
2004
10.2210/pdb1poq/pdb
pdb_00001poq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
13110.629
YPM
YPM(residues 33-151)
1
man
polymer
no
no
RIPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGEIKRNDIDKPLKYEDYYTSG
LSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV
RIPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGEIKRNDIDKPLKYEDYYTSG
LSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Yersinia
Escherichia
sample
ypmA
633
Yersinia pseudotuberculosis
562
Escherichia coli
Novablue
Plasmid
pMAL-p2x
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2004-01-27
1
1
2008-04-29
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
RCSB
Y
RCSB
2003-06-16
REL
REL
This structure was determined using standard 2D homonuclear and triple-resonance NMR spectroscopy.
structures with the lowest energy
100
20
2D NOESY
2D TOCSY
DQF-COSY
HNHA
HN(CO)CA
HNCA
CBCA(CO)NH
HNCACB
6.5
ambient
298
K
Final structures were based on 1934 unambiguous NOE-derived distance constraints, 139 ambiguous constraints, 135 dihedral angle restraints and 26 hydrogen bond distance restraints.
simulated annealing, molecular dynamics, torsion angle dynamics
1
lowest energy
0.5mM YPM protein (33-151), 95% H2O, 5% D2O
95% H2O/5% D2O
Bruker
processing
XwinNMR
2.6
Bartels et al
data analysis
XEASY
1.3.13
Guntert et al
refinement
DYANA
1.5
Linge et al
structure solution
ARIA
1.1.2
600
Bruker
DRX
ARG
14
n
1
ARG
14
A
ILE
15
n
2
ILE
15
A
PRO
16
n
3
PRO
16
A
ASN
17
n
4
ASN
17
A
ILE
18
n
5
ILE
18
A
ALA
19
n
6
ALA
19
A
THR
20
n
7
THR
20
A
TYR
21
n
8
TYR
21
A
THR
22
n
9
THR
22
A
GLY
23
n
10
GLY
23
A
THR
24
n
11
THR
24
A
ILE
25
n
12
ILE
25
A
GLN
26
n
13
GLN
26
A
GLY
27
n
14
GLY
27
A
LYS
28
n
15
LYS
28
A
GLY
29
n
16
GLY
29
A
GLU
30
n
17
GLU
30
A
VAL
31
n
18
VAL
31
A
CYS
32
n
19
CYS
32
A
ILE
33
n
20
ILE
33
A
ILE
34
n
21
ILE
34
A
GLY
35
n
22
GLY
35
A
ASN
36
n
23
ASN
36
A
LYS
37
n
24
LYS
37
A
GLU
38
n
25
GLU
38
A
GLY
39
n
26
GLY
39
A
LYS
40
n
27
LYS
40
A
THR
41
n
28
THR
41
A
ARG
42
n
29
ARG
42
A
GLY
43
n
30
GLY
43
A
GLY
44
n
31
GLY
44
A
GLU
45
n
32
GLU
45
A
LEU
46
n
33
LEU
46
A
TYR
47
n
34
TYR
47
A
ALA
48
n
35
ALA
48
A
VAL
49
n
36
VAL
49
A
LEU
50
n
37
LEU
50
A
HIS
51
n
38
HIS
51
A
SER
52
n
39
SER
52
A
THR
53
n
40
THR
53
A
ASN
54
n
41
ASN
54
A
VAL
55
n
42
VAL
55
A
ASN
56
n
43
ASN
56
A
ALA
57
n
44
ALA
57
A
ASP
58
n
45
ASP
58
A
MET
59
n
46
MET
59
A
THR
60
n
47
THR
60
A
LEU
61
n
48
LEU
61
A
ILE
62
n
49
ILE
62
A
LEU
63
n
50
LEU
63
A
LEU
64
n
51
LEU
64
A
ARG
65
n
52
ARG
65
A
ASN
66
n
53
ASN
66
A
VAL
67
n
54
VAL
67
A
GLY
68
n
55
GLY
68
A
GLY
69
n
56
GLY
69
A
ASN
70
n
57
ASN
70
A
GLY
71
n
58
GLY
71
A
TRP
72
n
59
TRP
72
A
GLY
73
n
60
GLY
73
A
GLU
74
n
61
GLU
74
A
ILE
75
n
62
ILE
75
A
LYS
76
n
63
LYS
76
A
ARG
77
n
64
ARG
77
A
ASN
78
n
65
ASN
78
A
ASP
79
n
66
ASP
79
A
ILE
80
n
67
ILE
80
A
ASP
81
n
68
ASP
81
A
LYS
82
n
69
LYS
82
A
PRO
83
n
70
PRO
83
A
LEU
84
n
71
LEU
84
A
LYS
85
n
72
LYS
85
A
TYR
86
n
73
TYR
86
A
GLU
87
n
74
GLU
87
A
ASP
88
n
75
ASP
88
A
TYR
89
n
76
TYR
89
A
TYR
90
n
77
TYR
90
A
THR
91
n
78
THR
91
A
SER
92
n
79
SER
92
A
GLY
93
n
80
GLY
93
A
LEU
94
n
81
LEU
94
A
SER
95
n
82
SER
95
A
TRP
96
n
83
TRP
96
A
ILE
97
n
84
ILE
97
A
TRP
98
n
85
TRP
98
A
LYS
99
n
86
LYS
99
A
ILE
100
n
87
ILE
100
A
LYS
101
n
88
LYS
101
A
ASN
102
n
89
ASN
102
A
ASN
103
n
90
ASN
103
A
SER
104
n
91
SER
104
A
SER
105
n
92
SER
105
A
GLU
106
n
93
GLU
106
A
THR
107
n
94
THR
107
A
SER
108
n
95
SER
108
A
ASN
109
n
96
ASN
109
A
TYR
110
n
97
TYR
110
A
SER
111
n
98
SER
111
A
LEU
112
n
99
LEU
112
A
ASP
113
n
100
ASP
113
A
ALA
114
n
101
ALA
114
A
THR
115
n
102
THR
115
A
VAL
116
n
103
VAL
116
A
HIS
117
n
104
HIS
117
A
ASP
118
n
105
ASP
118
A
ASP
119
n
106
ASP
119
A
LYS
120
n
107
LYS
120
A
GLU
121
n
108
GLU
121
A
ASP
122
n
109
ASP
122
A
SER
123
n
110
SER
123
A
ASP
124
n
111
ASP
124
A
VAL
125
n
112
VAL
125
A
LEU
126
n
113
LEU
126
A
THR
127
n
114
THR
127
A
LYS
128
n
115
LYS
128
A
CYS
129
n
116
CYS
129
A
PRO
130
n
117
PRO
130
A
VAL
131
n
118
VAL
131
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
21
A
N
TYR
8
A
O
LEU
112
A
O
LEU
99
A
O
SER
111
A
O
SER
98
A
N
HIS
51
A
N
HIS
38
A
N
ALA
48
A
N
ALA
35
A
O
LEU
84
A
O
LEU
71
A
N
ILE
33
A
N
ILE
20
A
O
TRP
98
A
O
TRP
85
A
O
ILE
97
A
O
ILE
84
A
N
LEU
64
A
N
LEU
51
A
N
LEU
63
A
N
LEU
50
A
O
LYS
76
A
O
LYS
63
1
A
A
HA
HB2
LEU
GLU
64
74
1.23
1
A
A
HG2
HG3
ARG
GLU
65
74
1.26
1
A
A
HG
H
LEU
GLU
64
74
1.29
2
A
A
HG23
HA
ILE
GLU
62
74
1.32
2
A
A
OE1
HZ3
GLU
LYS
30
99
1.59
2
A
A
HD1
OD1
HIS
ASP
51
81
1.59
3
A
A
H
HE3
ASN
TRP
36
96
0.93
3
A
A
HB3
HB3
ASN
TRP
36
96
1.34
3
A
A
OE2
HZ1
GLU
LYS
30
99
1.57
3
A
A
OE2
HZ2
GLU
LYS
74
99
1.58
3
A
A
HZ1
OE2
LYS
GLU
37
38
1.59
4
A
A
HG23
HB3
ILE
LYS
62
99
1.35
4
A
A
OE1
HZ2
GLU
LYS
30
99
1.59
5
A
A
HA3
HA
GLY
SER
35
123
1.26
5
A
A
HG21
HG23
ILE
ILE
15
18
1.28
5
A
A
HB3
H
GLU
GLY
38
39
1.35
5
A
A
HZ2
O
LYS
VAL
99
131
1.57
5
A
A
OE1
HZ3
GLU
LYS
30
99
1.60
6
A
A
HD13
HA
ILE
ILE
62
75
1.22
6
A
A
HB3
HD2
ASP
LYS
79
82
1.28
6
A
A
OE2
HZ3
GLU
LYS
30
101
1.59
6
A
A
OE1
HZ1
GLU
LYS
30
99
1.60
7
A
A
HZ2
O
LYS
VAL
99
131
1.55
7
A
A
HZ1
OE1
LYS
GLU
120
121
1.60
8
A
A
HE2
HB
TYR
ILE
21
33
1.27
9
A
A
HB2
HB3
LEU
TYR
46
86
1.30
9
A
A
OE1
HZ1
GLU
LYS
30
99
1.56
9
A
A
OE2
HZ1
GLU
LYS
30
101
1.56
9
A
A
HZ3
OD2
LYS
ASP
120
122
1.57
9
A
A
HZ3
OE1
LYS
GLU
37
38
1.58
10
A
A
HD23
H
LEU
GLU
46
87
1.29
10
A
A
HZ2
OD1
LYS
ASP
37
113
1.59
10
A
A
OE1
HZ2
GLU
LYS
30
99
1.60
11
A
A
HA3
HB3
GLY
TRP
35
96
1.18
11
A
A
H
HD12
ASN
LEU
36
63
1.27
11
A
A
HB
HG3
ILE
ARG
62
77
1.29
11
A
A
HB2
HB3
ASN
LEU
36
46
1.31
11
A
A
OE1
HZ3
GLU
LYS
30
99
1.59
12
A
A
HG22
HA
ILE
GLU
62
74
1.23
12
A
A
HG
HZ3
LEU
TRP
63
98
1.25
12
A
A
HB2
HH2
SER
TRP
92
96
1.29
12
A
A
HZ3
OD2
LYS
ASP
37
124
1.56
13
A
A
HA
HB3
LEU
LYS
46
85
1.13
13
A
A
HE2
HE1
TYR
TYR
21
86
1.19
13
A
A
HZ3
OE2
LYS
GLU
37
38
1.58
14
A
A
HA
H
LYS
VAL
120
131
1.18
14
A
A
HB3
HB3
CYS
ASP
32
119
1.33
14
A
A
HG
HD3
LEU
LYS
64
99
1.33
14
A
A
HZ1
OD1
LYS
ASP
99
119
1.55
15
A
A
HD23
HZ1
LEU
LYS
61
85
1.17
15
A
A
H
HB3
VAL
ASP
49
113
1.22
15
A
A
HB3
HD2
ASP
LYS
79
82
1.28
15
A
A
HB2
HB3
TYR
LEU
21
112
1.30
15
A
A
HB3
HB2
CYS
CYS
32
129
1.33
15
A
A
OE2
HZ1
GLU
LYS
30
101
1.60
16
A
A
HB3
HD3
ASP
LYS
79
82
1.17
16
A
A
HD23
HD2
LEU
LYS
64
99
1.22
16
A
A
HA3
HB3
GLY
ASN
29
102
1.29
16
A
A
HB2
H
PRO
ASN
16
17
1.30
16
A
A
OE2
HZ2
GLU
LYS
74
99
1.55
17
A
A
HB
H
ILE
GLY
34
35
1.32
17
A
A
OD1
HZ2
ASP
LYS
79
82
1.57
17
A
A
HZ2
OD2
LYS
ASP
37
58
1.59
17
A
A
OE1
HZ3
GLU
LYS
30
99
1.60
18
A
A
HD1
OD1
HIS
ASP
51
81
1.58
18
A
A
OE1
HZ3
GLU
LYS
74
101
1.60
19
A
A
HD21
HE3
ASN
TRP
66
72
1.10
19
A
A
H
H
ASN
GLY
66
71
1.19
19
A
A
HD22
HA
LEU
TRP
64
72
1.25
19
A
A
HZ3
OXT
LYS
VAL
99
131
1.54
19
A
A
OD1
HZ1
ASP
LYS
79
82
1.58
20
A
A
HA
HB3
THR
ASP
60
79
1.28
20
A
A
OE1
HZ2
GLU
LYS
74
99
1.54
20
A
A
OE1
HZ1
GLU
LYS
30
99
1.56
20
A
A
O
H
GLY
GLY
27
29
1.59
20
A
A
HD1
OD1
HIS
ASP
51
81
1.60
16
A
A
GLU
VAL
30
31
-145.76
20
A
A
GLU
THR
106
107
148.33
1
A
PRO
16
-48.35
-94.45
1
A
ILE
34
-144.67
22.21
1
A
LYS
37
-162.78
34.88
1
A
GLU
38
-129.51
-159.21
1
A
GLU
45
-57.78
99.54
1
A
ASN
54
-167.30
-150.91
1
A
VAL
55
-72.10
-86.72
1
A
THR
91
65.23
60.40
1
A
SER
92
-78.34
34.85
1
A
ASP
119
-158.21
14.17
1
A
LEU
126
-152.03
-77.88
1
A
THR
127
-157.03
77.46
2
A
PRO
16
-73.55
42.12
2
A
ASN
17
-156.70
-65.04
2
A
LYS
40
-171.94
-162.13
2
A
THR
41
-57.56
-74.42
2
A
GLU
45
-171.04
121.15
2
A
LEU
46
72.11
135.55
2
A
VAL
55
-53.39
-74.26
2
A
ASP
58
-107.36
57.98
2
A
VAL
67
-168.93
10.68
2
A
TRP
72
-77.83
-166.68
2
A
ILE
75
-129.60
-62.05
2
A
GLU
87
-78.90
-74.07
2
A
TYR
90
-163.06
-91.87
2
A
THR
91
-151.84
-54.14
2
A
LYS
120
-178.06
68.28
2
A
LEU
126
-176.42
-44.91
2
A
LYS
128
-130.07
-53.51
3
A
ALA
19
-160.39
79.71
3
A
ILE
34
47.44
101.30
3
A
LYS
40
-147.91
33.10
3
A
THR
41
-109.24
-60.04
3
A
ASN
54
-176.21
-151.81
3
A
ASP
58
-109.46
48.08
3
A
ILE
75
-124.59
-86.37
3
A
GLU
87
-73.96
-82.50
3
A
TYR
90
68.13
-64.70
3
A
LEU
94
-79.68
-74.46
3
A
THR
107
-57.61
106.95
3
A
ASP
118
-122.18
-122.84
3
A
ASP
119
-172.73
126.48
3
A
LYS
120
134.73
-176.21
3
A
ASP
124
-91.26
-80.47
3
A
LEU
126
-134.16
-144.45
4
A
LYS
40
59.75
96.69
4
A
GLU
45
57.77
-164.51
4
A
VAL
55
-47.52
-74.40
4
A
ASP
58
-119.53
56.39
4
A
ASN
70
-141.15
20.65
4
A
ILE
75
-132.81
-94.90
4
A
ILE
80
-166.29
-52.28
4
A
ASP
81
-159.79
36.24
4
A
TYR
89
-120.25
-66.56
4
A
TYR
90
69.74
-2.20
4
A
LEU
94
-98.36
-109.07
4
A
LYS
120
-163.18
49.86
4
A
ASP
122
-160.70
62.42
4
A
ASP
124
-111.50
74.89
5
A
ILE
34
-163.62
-39.47
5
A
LYS
37
-91.09
-104.18
5
A
GLU
38
52.23
-135.55
5
A
LYS
40
-152.46
-47.60
5
A
THR
41
62.06
83.95
5
A
LEU
46
74.38
-57.46
5
A
THR
53
-88.49
-114.67
5
A
ASN
54
-118.90
-121.14
5
A
ILE
75
-133.83
-88.65
5
A
GLU
87
65.89
-114.42
5
A
ASP
88
-161.35
-168.75
5
A
LEU
94
-131.39
-98.55
5
A
ASP
119
-111.25
-125.38
5
A
LYS
120
-132.52
-90.71
5
A
GLU
121
-156.95
25.37
5
A
SER
123
27.15
88.96
5
A
VAL
125
-178.75
-40.08
5
A
LEU
126
-150.12
20.20
5
A
LYS
128
-147.50
30.89
5
A
PRO
130
-95.32
51.99
6
A
PRO
16
-79.70
-131.94
6
A
GLU
38
60.65
-148.69
6
A
LYS
40
57.20
-113.05
6
A
THR
41
-155.23
-42.06
6
A
ASN
66
-48.62
160.03
6
A
TYR
90
74.02
162.96
6
A
LEU
94
-80.49
-139.31
6
A
ASP
118
67.90
-108.69
6
A
THR
127
-95.48
-75.91
6
A
LYS
128
-147.11
-142.34
7
A
PRO
16
-73.13
-138.84
7
A
ALA
19
-162.50
81.71
7
A
THR
22
-142.77
41.53
7
A
GLU
38
-84.36
-123.92
7
A
LYS
40
73.14
-37.18
7
A
SER
52
-113.91
71.59
7
A
VAL
55
-74.19
-76.30
7
A
ASN
56
-101.08
51.93
7
A
ASN
70
-161.36
-55.96
7
A
ILE
75
-115.49
-75.55
7
A
ASP
79
-78.20
-164.25
7
A
ASP
118
60.51
-173.33
7
A
ASP
119
-174.24
3.10
7
A
GLU
121
-120.82
-151.33
8
A
ALA
19
-154.77
69.16
8
A
THR
41
-139.68
-119.78
8
A
LEU
46
81.65
124.87
8
A
THR
53
-105.64
54.73
8
A
VAL
67
-163.71
35.44
8
A
ILE
75
-103.53
-83.66
8
A
ASP
88
69.98
105.83
8
A
TYR
90
67.76
-168.16
8
A
LEU
94
68.05
-178.91
8
A
HIS
117
44.01
71.30
8
A
LYS
120
-152.27
44.75
8
A
ASP
122
-118.38
-132.46
8
A
ASP
124
-155.07
79.07
8
A
THR
127
-152.91
-66.23
8
A
LYS
128
69.01
-55.99
9
A
LYS
37
-135.18
-66.48
9
A
VAL
55
-33.80
-81.10
9
A
ASN
56
-104.79
66.89
9
A
VAL
67
174.60
-25.51
9
A
ASN
70
58.71
-95.56
9
A
ILE
75
-125.16
-72.29
9
A
TYR
90
71.07
107.30
9
A
ASP
118
75.87
57.45
9
A
LYS
120
59.55
14.52
9
A
SER
123
65.02
-178.90
9
A
THR
127
55.89
-147.36
9
A
PRO
130
-68.87
63.50
10
A
PRO
16
-63.91
-71.18
10
A
ILE
34
-166.04
111.97
10
A
LYS
37
-162.81
-85.42
10
A
GLU
38
-178.08
149.99
10
A
GLU
45
-75.81
-78.95
10
A
ASN
54
-167.83
-154.60
10
A
VAL
55
-64.28
-78.86
10
A
ASP
58
-108.48
73.91
10
A
ILE
75
-132.18
-91.69
10
A
GLU
87
179.10
156.23
10
A
ASP
88
69.61
-33.94
10
A
THR
91
-110.35
-164.27
10
A
SER
92
-59.27
106.13
10
A
THR
107
-65.19
99.60
10
A
HIS
117
77.16
121.94
10
A
ASP
119
68.81
167.75
10
A
LYS
120
74.46
108.28
10
A
VAL
125
-150.13
-46.86
10
A
LEU
126
69.69
-65.21
11
A
ILE
34
64.27
167.67
11
A
LYS
37
-80.82
-105.98
11
A
LYS
40
-135.01
-36.67
11
A
LEU
46
83.01
-6.55
11
A
ASN
56
30.10
62.76
11
A
VAL
67
-158.76
22.63
11
A
ASN
70
-88.70
41.36
11
A
GLU
87
-106.77
-66.97
11
A
ASP
118
-176.24
-34.53
11
A
SER
123
-142.66
35.12
11
A
ASP
124
-160.81
-43.50
11
A
LYS
128
69.99
-132.38
11
A
CYS
129
-115.18
65.59
11
A
PRO
130
-114.84
75.49
12
A
ILE
34
-178.24
-35.04
12
A
LYS
40
-154.52
-40.06
12
A
LEU
46
-164.90
13.76
12
A
THR
53
-79.53
43.85
12
A
ALA
57
-61.60
-78.29
12
A
ASP
58
166.61
53.79
12
A
VAL
67
174.72
-22.08
12
A
ASN
70
67.55
124.58
12
A
ILE
75
-159.22
-94.41
12
A
TYR
90
-93.63
-87.90
12
A
LEU
94
-107.04
-80.51
12
A
SER
104
-112.76
-107.38
12
A
SER
105
-161.59
27.72
12
A
HIS
117
-61.66
85.26
12
A
SER
123
-66.86
97.74
13
A
PRO
16
-57.81
-71.81
13
A
ILE
34
-70.26
-155.27
13
A
LYS
37
175.34
174.11
13
A
GLU
38
72.22
171.78
13
A
THR
53
-114.77
66.02
13
A
VAL
67
-169.41
-23.52
13
A
ASP
81
-155.79
53.77
13
A
GLU
87
171.72
-88.19
13
A
ASP
88
176.44
125.45
13
A
TYR
90
-124.86
-66.13
13
A
SER
92
-109.70
-93.71
13
A
SER
104
-158.65
-140.34
13
A
SER
105
61.57
-158.33
13
A
THR
107
-45.66
100.70
13
A
ASP
119
-157.85
71.52
13
A
LYS
120
-163.22
38.33
13
A
PRO
130
-97.40
32.13
14
A
THR
22
-102.52
61.22
14
A
LYS
37
-134.01
-64.98
14
A
GLU
45
-138.93
-151.29
14
A
ASN
66
-46.92
159.51
14
A
ASN
70
-83.65
47.09
14
A
ILE
75
-130.69
-79.94
14
A
ASP
88
68.00
70.60
14
A
THR
91
75.51
-38.87
14
A
LEU
94
-92.61
-136.57
14
A
HIS
117
-93.41
-137.70
14
A
ASP
119
-159.59
-66.24
14
A
ASP
124
-137.83
-39.44
14
A
LEU
126
179.52
167.16
14
A
CYS
129
-172.13
-50.13
14
A
PRO
130
-35.17
123.89
15
A
GLU
38
69.61
110.58
15
A
LYS
40
-69.89
-91.87
15
A
LEU
46
-150.87
30.49
15
A
ALA
57
-78.19
47.62
15
A
TRP
72
-61.45
97.48
15
A
ILE
75
-133.95
-96.17
15
A
GLU
87
179.65
161.91
15
A
THR
91
-101.07
-81.53
15
A
LEU
94
-158.20
11.03
15
A
HIS
117
-13.80
102.99
15
A
ASP
118
-147.96
-143.13
15
A
LEU
126
-149.85
-48.75
15
A
LYS
128
68.29
94.06
15
A
PRO
130
-93.03
37.06
16
A
PRO
16
-81.94
-114.82
16
A
TYR
21
-106.76
77.22
16
A
THR
22
-88.74
46.78
16
A
VAL
31
-116.38
73.59
16
A
LYS
37
-130.42
-69.48
16
A
THR
53
-84.30
36.15
16
A
ASP
58
-145.16
55.24
16
A
VAL
67
-165.93
-9.54
16
A
ILE
75
-131.90
-87.41
16
A
TYR
90
74.14
-62.48
16
A
SER
92
57.48
-158.99
16
A
ASN
103
56.06
-101.45
16
A
SER
104
175.69
-103.88
16
A
HIS
117
-102.07
58.76
16
A
GLU
121
66.37
-128.30
16
A
ASP
122
74.23
-71.04
16
A
SER
123
63.14
-73.08
16
A
ASP
124
-175.22
-93.59
16
A
VAL
125
72.13
-45.84
17
A
ASN
17
-145.63
-115.94
17
A
ILE
33
-171.63
-175.09
17
A
ILE
34
-71.03
-136.43
17
A
LYS
37
70.18
96.40
17
A
ASN
70
-161.01
-63.51
17
A
ILE
75
-157.48
-54.73
17
A
ASP
79
-112.79
-169.09
17
A
GLU
87
-56.45
-76.42
17
A
SER
92
-161.63
66.29
17
A
HIS
117
-156.21
-46.13
17
A
VAL
125
-167.09
-75.18
17
A
LEU
126
-146.03
-66.29
17
A
CYS
129
69.83
84.01
18
A
ILE
34
-155.55
-156.10
18
A
LYS
37
-149.49
24.40
18
A
GLU
38
66.75
-137.61
18
A
LYS
40
-155.91
32.64
18
A
ASN
54
-170.96
-172.11
18
A
VAL
55
-73.76
-70.19
18
A
ASP
58
-118.72
76.29
18
A
ILE
75
-133.54
-92.65
18
A
ILE
80
-165.52
70.05
18
A
TYR
90
-111.15
-144.82
18
A
SER
92
76.89
138.56
18
A
SER
105
56.93
104.05
18
A
ASP
118
-139.49
-56.25
18
A
ASP
119
-100.62
-164.22
18
A
ASP
124
-75.24
-84.76
18
A
VAL
125
55.55
84.28
18
A
LYS
128
67.47
114.67
19
A
THR
22
-113.56
72.87
19
A
ILE
34
-155.47
79.59
19
A
LYS
40
-140.63
-69.47
19
A
GLU
45
-168.85
-160.19
19
A
ASN
56
52.27
71.45
19
A
ALA
57
-68.07
68.99
19
A
ASP
58
-118.42
76.69
19
A
ASN
70
69.46
97.84
19
A
TRP
72
-29.99
93.23
19
A
ILE
75
-130.11
-76.80
19
A
ASP
79
-110.89
-165.53
19
A
ASP
88
58.52
78.36
19
A
THR
91
-86.76
-91.47
19
A
ASP
118
-175.20
-164.32
19
A
LYS
120
-126.67
-156.20
19
A
GLU
121
-105.84
-104.49
19
A
SER
123
-172.92
115.22
19
A
THR
127
-67.96
87.22
19
A
LYS
128
67.09
70.53
20
A
LYS
28
-68.90
51.62
20
A
ILE
34
-90.06
-91.94
20
A
ALA
57
-18.18
84.89
20
A
ASN
66
-48.30
154.37
20
A
ILE
75
-149.79
-70.86
20
A
ILE
80
-169.96
-85.64
20
A
GLU
87
172.90
167.95
20
A
TYR
90
-115.72
-155.98
20
A
SER
104
-83.25
-158.45
20
A
LYS
120
-176.25
48.50
20
A
ASP
122
64.29
-70.59
20
A
ASP
124
-87.77
41.21
20
A
THR
127
58.43
-139.09
Solution Structure of a Superantigen from Yersinia pseudotuberculosis
1
N
N
disulf
2.032
A
CYS
32
A
SG
CYS
19
1_555
A
CYS
129
A
SG
CYS
116
1_555
IMMUNE SYSTEM
Jelly roll fold, IMMUNE SYSTEM
Q57221_YERPS
UNP
1
34
Q57221
RIPNIATYTGTIQGKGEVCIIGNKEGKTRGGELYAVLHSTNVNADMTLILLRNVGGNGWGEIKRNDIDKPLKYEDYYTSG
LSWIWKIKNNSSETSNYSLDATVHDDKEDSDVLTKCPV
34
151
1POQ
14
131
Q57221
A
1
1
118
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
19
A
ALA
6
A
ILE
25
A
ILE
12
A
SER
108
A
SER
95
A
ALA
114
A
ALA
101
A
TYR
47
A
TYR
34
A
HIS
51
A
HIS
38
A
LYS
82
A
LYS
69
A
LYS
85
A
LYS
72
A
GLU
30
A
GLU
17
A
ILE
33
A
ILE
20
A
TRP
96
A
TRP
83
A
ASN
102
A
ASN
89
A
MET
59
A
MET
46
A
ARG
65
A
ARG
52
A
LYS
76
A
LYS
63
A
ASN
78
A
ASN
65