0.040000 0.000000 0.000000 0.000000 0.024462 0.000000 0.000000 0.000000 0.014863 0.00000 0.00000 0.00000 Nunn, C.M. Jenkins, T.C. Neidle, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 25.000 40.880 67.280 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer C17 H20 N4 O2 312.366 1,3-BIS(AMIDINOPHENOXY)PROPANE non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H Y 147 N C Y 148 N C Y 149 N C Y 150 N C Y 151 N C Y 152 N C N 153 N C N 154 N N N 155 N N Y 156 N C Y 157 N C Y 158 N C Y 159 N C Y 160 N C Y 161 N C N 162 N C N 163 N N N 164 N N N 165 N C N 166 N O N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing Y 152 N doub Y 153 N sing N 154 N sing Y 155 N sing N 156 N sing Y 157 N doub N 158 N sing Y 159 N sing N 160 N sing Y 161 N doub N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing Y 169 N doub Y 170 N sing N 171 N sing Y 172 N sing N 173 N sing Y 174 N doub N 175 N sing Y 176 N sing N 177 N sing Y 178 N doub N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing US Biochemistry BICHAW 0033 0006-2960 32 13838 13843 10.1021/bi00213a012 8268158 Crystal structure of d(CGCGAATTCGCG) complexed with propamidine, a short-chain homologue of the drug pentamidine. 1993 10.2210/pdb1prp/pdb pdb_00001prp 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 289.00 1 AREA DETECTOR XENTRONICS x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE 3663.392 DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') 2 syn polymer 312.366 1,3-BIS(AMIDINOPHENOXY)PROPANE 1 syn non-polymer 18.015 water 69 nat water no no (DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG) CGCGAATTCGCG A,B polydeoxyribonucleotide n n n n n n n n n n n n 2.35 47.57 VAPOR DIFFUSION, SITTING DROP 7.00 pH 7.00, VAPOR DIFFUSION, SITTING DROP WATER 1 MPD 1 MGCL2 1 NA CACODYLATE 1 WATER 2 MPD 2 7.339 1 19 A 1 B 24 0.840 A_DC1:DG24_B 1 -16.000 0.340 0.030 -0.133 1.681 1 19 A 2 B 23 -6.782 A_DG2:DC23_B 2 -11.039 -0.453 0.248 -0.409 -5.939 1 19 A 3 B 22 -2.747 A_DC3:DG22_B 3 -4.305 0.215 0.137 -0.466 5.899 1 19 A 4 B 21 -3.564 A_DG4:DC21_B 4 -10.654 -0.582 -0.071 -0.133 -0.430 1 20 A 5 B 20 -2.831 A_DA5:DT20_B 5 -16.115 0.197 -0.289 -0.269 -1.109 1 20 A 6 B 19 0.169 A_DA6:DT19_B 6 -22.225 0.094 0.066 -0.059 0.999 1 20 A 7 B 18 7.276 A_DT7:DA18_B 7 -13.844 0.126 0.189 -0.156 -4.516 1 20 A 8 B 17 3.018 A_DT8:DA17_B 8 -14.242 0.203 0.011 -0.191 -2.058 1 19 A 9 B 16 -0.884 A_DC9:DG16_B 9 -10.329 -0.109 -0.019 -0.204 2.860 1 19 A 10 B 15 0.645 A_DG10:DC15_B 10 -5.535 -0.499 0.119 -0.415 3.200 1 19 A 11 B 14 -8.134 A_DC11:DG14_B 11 -21.403 -0.075 0.242 -0.204 5.329 1 19 A 12 B 13 -6.677 A_DG12:DC13_B 12 15.569 -0.192 0.045 -0.269 3.630 34.440 A A 1 2 11.155 B B 24 23 3.650 6.554 -0.428 0.099 AA_DC1DG2:DC23DG24_BB 1 -3.815 6.494 33.620 -0.982 0.053 3.562 41.295 A A 2 3 -9.469 B B 23 22 3.661 -6.648 0.566 0.513 AA_DG2DC3:DG22DC23_BB 2 2.185 -3.112 40.724 1.522 -0.541 3.289 27.265 A A 3 4 19.129 B B 22 21 3.282 8.841 -0.229 0.701 AA_DC3DG4:DC21DG22_BB 3 3.014 -6.521 25.643 -0.802 1.266 3.421 39.732 A A 4 5 6.757 B B 21 20 3.446 4.583 -0.129 -0.030 AA_DG4DA5:DT20DC21_BB 4 0.068 -0.100 39.477 -0.606 0.199 3.276 38.358 A A 5 6 2.192 B B 20 19 3.296 1.440 0.270 -0.270 AA_DA5DA6:DT19DT20_BB 5 -1.035 1.576 38.318 -0.592 -0.541 3.262 29.912 A A 6 7 2.713 B B 19 18 3.291 1.400 0.427 -0.591 AA_DA6DT7:DA18DT19_BB 6 0.112 -0.217 29.880 -1.436 -0.804 3.407 37.446 A A 7 8 0.956 B B 18 17 3.429 0.614 -0.385 -0.021 AA_DT7DT8:DA17DA18_BB 7 1.797 -2.799 37.400 -0.116 0.847 3.287 37.284 A A 8 9 -2.412 B B 17 16 3.285 -1.541 -0.219 0.016 AA_DT8DC9:DG16DA17_BB 8 -1.285 2.011 37.232 0.230 0.171 3.549 29.086 A A 9 10 7.430 B B 16 15 3.503 3.717 0.337 0.927 AA_DC9DG10:DC15DG16_BB 9 -2.604 5.206 28.737 0.963 -1.290 3.314 43.484 A A 10 11 -16.076 B B 15 14 3.449 -11.753 -1.376 0.555 AA_DG10DC11:DG14DC15_BB 10 -4.805 6.572 41.676 1.951 1.366 3.587 38.590 A A 11 12 -14.186 B B 14 13 3.671 -9.260 0.798 0.251 AA_DC11DG12:DC13DG14_BB 11 5.479 -8.393 37.115 1.675 -0.442 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1994-01-15 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1993-07-23 REL REL TNT 1,3-BIS(AMIDINOPHENOXY)PROPANE HOH water TNT 25 2 TNT TNT 25 A HOH 26 3 HOH HOH 26 A HOH 27 3 HOH HOH 27 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 30 3 HOH HOH 30 A HOH 31 3 HOH HOH 31 A HOH 36 3 HOH HOH 36 A HOH 39 3 HOH HOH 39 A HOH 42 3 HOH HOH 42 A HOH 43 3 HOH HOH 43 A HOH 44 3 HOH HOH 44 A HOH 45 3 HOH HOH 45 A HOH 48 3 HOH HOH 48 A HOH 51 3 HOH HOH 51 A HOH 53 3 HOH HOH 53 A HOH 58 3 HOH HOH 58 A HOH 61 3 HOH HOH 61 A HOH 62 3 HOH HOH 62 A HOH 63 3 HOH HOH 63 A HOH 64 3 HOH HOH 64 A HOH 65 3 HOH HOH 65 A HOH 66 3 HOH HOH 66 A HOH 67 3 HOH HOH 67 A HOH 69 3 HOH HOH 69 A HOH 70 3 HOH HOH 70 A HOH 71 3 HOH HOH 71 A HOH 76 3 HOH HOH 76 A HOH 78 3 HOH HOH 78 A HOH 80 3 HOH HOH 80 A HOH 81 3 HOH HOH 81 A HOH 82 3 HOH HOH 82 A HOH 83 3 HOH HOH 83 A HOH 84 3 HOH HOH 84 A HOH 86 3 HOH HOH 86 A HOH 87 3 HOH HOH 87 A HOH 88 3 HOH HOH 88 A HOH 90 3 HOH HOH 90 A HOH 91 3 HOH HOH 91 A HOH 92 3 HOH HOH 92 A HOH 93 3 HOH HOH 93 A HOH 32 3 HOH HOH 32 B HOH 33 3 HOH HOH 33 B HOH 34 3 HOH HOH 34 B HOH 35 3 HOH HOH 35 B HOH 37 3 HOH HOH 37 B HOH 38 3 HOH HOH 38 B HOH 40 3 HOH HOH 40 B HOH 41 3 HOH HOH 41 B HOH 46 3 HOH HOH 46 B HOH 47 3 HOH HOH 47 B HOH 49 3 HOH HOH 49 B HOH 50 3 HOH HOH 50 B HOH 52 3 HOH HOH 52 B HOH 54 3 HOH HOH 54 B HOH 55 3 HOH HOH 55 B HOH 56 3 HOH HOH 56 B HOH 57 3 HOH HOH 57 B HOH 59 3 HOH HOH 59 B HOH 60 3 HOH HOH 60 B HOH 68 3 HOH HOH 68 B HOH 72 3 HOH HOH 72 B HOH 73 3 HOH HOH 73 B HOH 74 3 HOH HOH 74 B HOH 75 3 HOH HOH 75 B HOH 77 3 HOH HOH 77 B HOH 79 3 HOH HOH 79 B HOH 85 3 HOH HOH 85 B HOH 89 3 HOH HOH 89 B HOH 94 3 HOH HOH 94 B C 1 n 1 DC 1 A G 2 n 2 DG 2 A C 3 n 3 DC 3 A G 4 n 4 DG 4 A A 5 n 5 DA 5 A A 6 n 6 DA 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A C 9 n 9 DC 9 A G 10 n 10 DG 10 A C 11 n 11 DC 11 A G 12 n 12 DG 12 A C 13 n 1 DC 13 B G 14 n 2 DG 14 B C 15 n 3 DC 15 B G 16 n 4 DG 16 B A 17 n 5 DA 17 B A 18 n 6 DA 18 B T 19 n 7 DT 19 B T 20 n 8 DT 20 B C 21 n 9 DC 21 B G 22 n 10 DG 22 B C 23 n 11 DC 23 B G 24 n 12 DG 24 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A DC 3 0.084 SIDE CHAIN 1 B DA 18 0.055 SIDE CHAIN 1 -4.89 0.80 105.90 101.01 A A A O4' C1' C2' DC DC DC 1 1 1 N 1 2.19 0.30 108.30 110.49 A A A O4' C1' N1 DC DC DC 1 1 1 N 1 4.71 0.60 118.90 123.61 A A A N1 C2 O2 DC DC DC 1 1 1 N 1 3.16 0.50 111.90 115.06 A A A C2 N3 C4 DG DG DG 2 2 2 N 1 6.70 0.30 108.30 115.00 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 -5.81 0.80 105.90 100.09 A A A O4' C1' C2' DA DA DA 5 5 5 N 1 -6.63 1.00 110.10 103.47 A A A C1' O4' C4' DT DT DT 7 7 7 N 1 -5.55 0.80 105.90 100.35 A A A O4' C1' C2' DT DT DT 7 7 7 N 1 3.87 0.60 118.00 121.87 A A A C4 C5 C6 DT DT DT 7 7 7 N 1 -7.90 0.80 105.90 98.00 A A A O4' C1' C2' DT DT DT 8 8 8 N 1 3.62 0.60 118.00 121.62 A A A C4 C5 C6 DT DT DT 8 8 8 N 1 -4.76 0.60 122.30 117.54 A A A N3 C2 O2 DT DT DT 8 8 8 N 1 -5.55 0.60 122.90 117.35 A A A C6 C5 C7 DT DT DT 8 8 8 N 1 9.98 1.20 119.70 129.68 A A A C3' O3' P DT DT DC 8 8 9 Y 1 -7.20 0.80 105.90 98.70 A A A O4' C1' C2' DC DC DC 9 9 9 N 1 5.24 0.60 118.90 124.14 A A A N1 C2 O2 DC DC DC 9 9 9 N 1 5.28 0.30 108.30 113.58 A A A O4' C1' N9 DG DG DG 10 10 10 N 1 -2.79 0.40 104.50 101.71 A A A O4' C4' C3' DG DG DG 12 12 12 N 1 4.52 0.60 118.90 123.42 B B B N1 C2 O2 DC DC DC 13 13 13 N 1 -2.94 0.40 104.50 101.56 B B B O4' C4' C3' DC DC DC 15 15 15 N 1 8.20 1.20 119.70 127.90 B B B C3' O3' P DC DC DG 15 15 16 Y 1 -6.08 0.80 105.90 99.82 B B B O4' C1' C2' DG DG DG 16 16 16 N 1 1.88 0.30 108.30 110.18 B B B O4' C1' N9 DG DG DG 16 16 16 N 1 -2.75 0.40 106.40 103.65 B B B C8 N9 C4 DG DG DG 16 16 16 N 1 7.26 1.20 119.70 126.96 B B B C3' O3' P DG DG DA 16 16 17 Y 1 -2.88 0.40 104.50 101.62 B B B O4' C4' C3' DA DA DA 17 17 17 N 1 2.06 0.30 108.30 110.36 B B B O4' C1' N9 DA DA DA 17 17 17 N 1 -5.64 0.80 105.90 100.26 B B B O4' C1' C2' DA DA DA 18 18 18 N 1 -5.30 0.80 109.40 104.10 B B B O5' C5' C4' DT DT DT 19 19 19 N 1 -7.51 1.00 110.10 102.59 B B B C1' O4' C4' DT DT DT 19 19 19 N 1 -3.83 0.60 122.30 118.47 B B B N3 C2 O2 DT DT DT 19 19 19 N 1 4.51 0.60 119.00 123.51 B B B C4 C5 C7 DT DT DT 19 19 19 N 1 -6.31 0.60 122.90 116.59 B B B C6 C5 C7 DT DT DT 19 19 19 N 1 -7.80 0.80 105.90 98.10 B B B O4' C1' C2' DT DT DT 20 20 20 N 1 3.73 0.60 118.00 121.73 B B B C4 C5 C6 DT DT DT 20 20 20 N 1 8.63 1.20 119.70 128.33 B B B C3' O3' P DC DC DG 21 21 22 Y 1 -5.31 0.80 105.90 100.59 B B B O4' C1' C2' DG DG DG 22 22 22 N 1 4.80 0.30 108.30 113.10 B B B O4' C1' N9 DG DG DG 22 22 22 N 1 5.85 0.30 108.30 114.15 B B B O4' C1' N1 DC DC DC 23 23 23 N 1 3.15 0.50 111.50 114.65 B B B C5 C6 N1 DG DG DG 24 24 24 N 1 B B C5' C4' DC DC 13 13 0.065 0.007 1.512 1.577 N 1 B B N1 C6 DC DC 15 15 -0.042 0.006 1.367 1.325 N 1 B B C5' C4' DA DA 18 18 0.058 0.007 1.512 1.570 N 1 B B C5 C7 DT DT 19 19 0.048 0.006 1.496 1.544 N 1 B B C3' C2' DG DG 24 24 -0.054 0.008 1.516 1.462 N 0.1740000 0.1740000 2.100 8.000 2786 1 2.000 TR isotropic TR isotropic 2.100 8.000 69 578 23 486 0 fix fix 2.100 1PRP 4021 0.0830000 1 refinement X-PLOR CRYSTAL STRUCTURE OF D(CGCGAATTCGCG) COMPLEXED WITH PROPAMIDINE, A SHORT-CHAIN HOMOLOGUE OF THE DRUG PENTAMIDIN 1 N N 1 N N 2 N N 3 N N 3 N N hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 24 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 24 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 24 B N2 DG 12 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 23 B N3 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 23 B O2 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 23 B N4 DC 11 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 22 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 22 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 22 B N2 DG 10 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 21 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 21 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 21 B N4 DC 9 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B DT 20 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B DT 20 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 19 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 19 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 18 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 18 B N6 DA 6 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 17 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 17 B N6 DA 5 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 16 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 16 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 16 B N2 DG 4 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 15 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 15 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 15 B N4 DC 3 1_555 hydrog WATSON-CRICK A DC 11 A N3 DC 11 1_555 B DG 14 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A N4 DC 11 1_555 B DG 14 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A O2 DC 11 1_555 B DG 14 B N2 DG 2 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 13 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 13 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 13 B N4 DC 1 1_555 DNA B-DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA 1PRP PDB 1 1PRP 1 12 1PRP 1 12 1PRP A 1 1 12 13 24 1PRP 13 24 1PRP B 1 1 12 BINDING SITE FOR RESIDUE TNT A 25 A TNT 25 Software 8 A DA 6 A DA 6 8 1_555 A DT 8 A DT 8 8 1_555 A DC 9 A DC 9 8 1_555 B DA 17 B DA 5 8 1_555 B DA 18 B DA 6 8 1_555 B DT 19 B DT 7 8 1_555 B DT 20 B DT 8 8 1_555 B DC 21 B DC 9 8 1_555 19 P 21 21 21