1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
SURFACE LOOPS AT RESIDUES 33 - 40, 72 - 80, 123 - 129, AND 159 - 168 ARE RELATIVELY POORLY DEFINED.
Bagby, S.
Harvey, T.S.
Eagle, S.G.
Inouye, S.
Ikura, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
2
107
122
10.1016/S0969-2126(00)00013-7
8081742
NMR-derived three-dimensional solution structure of protein S complexed with calcium.
1994
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
91
4308
Structural Similarity of a Developmentally Regulated Bacterial Spore Coat Protein to Betagamma-Crystallins of the Vertebrate Eye Lens
1994
US
Biochemistry
BICHAW
0033
0006-2960
33
2409
Unusual Helix-Containing Greek Keys in Development-Specific Ca2+-Binding Protein S. 1H, 15N and 13C Assignments and Secondary Structure Determined Using Multidimensional Double and Triple Resonance Heteronuclear NMR Spectroscopy
1994
10.2210/pdb1prr/pdb
pdb_00001prr
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
18805.865
DEVELOPMENT-SPECIFIC PROTEIN S
1
man
polymer
40.078
CALCIUM ION
2
syn
non-polymer
no
no
MANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVS
SIRVISVPVQPRARFFYKEQFDGKEVDLPPGQYTQAELERYGIDNNTISSVKPQGLAVVLFKNDNFSGDTLPVNSDAPTL
GAMNNNTSSIRIS
MANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVS
SIRVISVPVQPRARFFYKEQFDGKEVDLPPGQYTQAELERYGIDNNTISSVKPQGLAVVLFKNDNFSGDTLPVNSDAPTL
GAMNNNTSSIRIS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Myxococcus
sample
34
Myxococcus xanthus
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1994-08-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1994-03-25
REL
CA
CALCIUM ION
1
BRUNGER
refinement
X-PLOR
CA
174
2
CA
CA
174
A
CA
175
2
CA
CA
175
A
MET
1
n
1
MET
1
A
ALA
2
n
2
ALA
2
A
ASN
3
n
3
ASN
3
A
ILE
4
n
4
ILE
4
A
THR
5
n
5
THR
5
A
VAL
6
n
6
VAL
6
A
PHE
7
n
7
PHE
7
A
TYR
8
n
8
TYR
8
A
ASN
9
n
9
ASN
9
A
GLU
10
n
10
GLU
10
A
ASP
11
n
11
ASP
11
A
PHE
12
n
12
PHE
12
A
GLN
13
n
13
GLN
13
A
GLY
14
n
14
GLY
14
A
LYS
15
n
15
LYS
15
A
GLN
16
n
16
GLN
16
A
VAL
17
n
17
VAL
17
A
ASP
18
n
18
ASP
18
A
LEU
19
n
19
LEU
19
A
PRO
20
n
20
PRO
20
A
PRO
21
n
21
PRO
21
A
GLY
22
n
22
GLY
22
A
ASN
23
n
23
ASN
23
A
TYR
24
n
24
TYR
24
A
THR
25
n
25
THR
25
A
ARG
26
n
26
ARG
26
A
ALA
27
n
27
ALA
27
A
GLN
28
n
28
GLN
28
A
LEU
29
n
29
LEU
29
A
ALA
30
n
30
ALA
30
A
ALA
31
n
31
ALA
31
A
LEU
32
n
32
LEU
32
A
GLY
33
n
33
GLY
33
A
ILE
34
n
34
ILE
34
A
GLU
35
n
35
GLU
35
A
ASN
36
n
36
ASN
36
A
ASN
37
n
37
ASN
37
A
THR
38
n
38
THR
38
A
ILE
39
n
39
ILE
39
A
SER
40
n
40
SER
40
A
SER
41
n
41
SER
41
A
VAL
42
n
42
VAL
42
A
LYS
43
n
43
LYS
43
A
VAL
44
n
44
VAL
44
A
PRO
45
n
45
PRO
45
A
PRO
46
n
46
PRO
46
A
GLY
47
n
47
GLY
47
A
VAL
48
n
48
VAL
48
A
LYS
49
n
49
LYS
49
A
ALA
50
n
50
ALA
50
A
ILE
51
n
51
ILE
51
A
LEU
52
n
52
LEU
52
A
TYR
53
n
53
TYR
53
A
GLN
54
n
54
GLN
54
A
ASN
55
n
55
ASN
55
A
ASP
56
n
56
ASP
56
A
GLY
57
n
57
GLY
57
A
PHE
58
n
58
PHE
58
A
ALA
59
n
59
ALA
59
A
GLY
60
n
60
GLY
60
A
ASP
61
n
61
ASP
61
A
GLN
62
n
62
GLN
62
A
ILE
63
n
63
ILE
63
A
GLU
64
n
64
GLU
64
A
VAL
65
n
65
VAL
65
A
VAL
66
n
66
VAL
66
A
ALA
67
n
67
ALA
67
A
ASN
68
n
68
ASN
68
A
ALA
69
n
69
ALA
69
A
GLU
70
n
70
GLU
70
A
GLU
71
n
71
GLU
71
A
LEU
72
n
72
LEU
72
A
GLY
73
n
73
GLY
73
A
PRO
74
n
74
PRO
74
A
LEU
75
n
75
LEU
75
A
ASN
76
n
76
ASN
76
A
ASN
77
n
77
ASN
77
A
ASN
78
n
78
ASN
78
A
VAL
79
n
79
VAL
79
A
SER
80
n
80
SER
80
A
SER
81
n
81
SER
81
A
ILE
82
n
82
ILE
82
A
ARG
83
n
83
ARG
83
A
VAL
84
n
84
VAL
84
A
ILE
85
n
85
ILE
85
A
SER
86
n
86
SER
86
A
VAL
87
n
87
VAL
87
A
PRO
88
n
88
PRO
88
A
VAL
89
n
89
VAL
89
A
GLN
90
n
90
GLN
90
A
PRO
91
n
91
PRO
91
A
ARG
92
n
92
ARG
92
A
ALA
93
n
93
ALA
93
A
ARG
94
n
94
ARG
94
A
PHE
95
n
95
PHE
95
A
PHE
96
n
96
PHE
96
A
TYR
97
n
97
TYR
97
A
LYS
98
n
98
LYS
98
A
GLU
99
n
99
GLU
99
A
GLN
100
n
100
GLN
100
A
PHE
101
n
101
PHE
101
A
ASP
102
n
102
ASP
102
A
GLY
103
n
103
GLY
103
A
LYS
104
n
104
LYS
104
A
GLU
105
n
105
GLU
105
A
VAL
106
n
106
VAL
106
A
ASP
107
n
107
ASP
107
A
LEU
108
n
108
LEU
108
A
PRO
109
n
109
PRO
109
A
PRO
110
n
110
PRO
110
A
GLY
111
n
111
GLY
111
A
GLN
112
n
112
GLN
112
A
TYR
113
n
113
TYR
113
A
THR
114
n
114
THR
114
A
GLN
115
n
115
GLN
115
A
ALA
116
n
116
ALA
116
A
GLU
117
n
117
GLU
117
A
LEU
118
n
118
LEU
118
A
GLU
119
n
119
GLU
119
A
ARG
120
n
120
ARG
120
A
TYR
121
n
121
TYR
121
A
GLY
122
n
122
GLY
122
A
ILE
123
n
123
ILE
123
A
ASP
124
n
124
ASP
124
A
ASN
125
n
125
ASN
125
A
ASN
126
n
126
ASN
126
A
THR
127
n
127
THR
127
A
ILE
128
n
128
ILE
128
A
SER
129
n
129
SER
129
A
SER
130
n
130
SER
130
A
VAL
131
n
131
VAL
131
A
LYS
132
n
132
LYS
132
A
PRO
133
n
133
PRO
133
A
GLN
134
n
134
GLN
134
A
GLY
135
n
135
GLY
135
A
LEU
136
n
136
LEU
136
A
ALA
137
n
137
ALA
137
A
VAL
138
n
138
VAL
138
A
VAL
139
n
139
VAL
139
A
LEU
140
n
140
LEU
140
A
PHE
141
n
141
PHE
141
A
LYS
142
n
142
LYS
142
A
ASN
143
n
143
ASN
143
A
ASP
144
n
144
ASP
144
A
ASN
145
n
145
ASN
145
A
PHE
146
n
146
PHE
146
A
SER
147
n
147
SER
147
A
GLY
148
n
148
GLY
148
A
ASP
149
n
149
ASP
149
A
THR
150
n
150
THR
150
A
LEU
151
n
151
LEU
151
A
PRO
152
n
152
PRO
152
A
VAL
153
n
153
VAL
153
A
ASN
154
n
154
ASN
154
A
SER
155
n
155
SER
155
A
ASP
156
n
156
ASP
156
A
ALA
157
n
157
ALA
157
A
PRO
158
n
158
PRO
158
A
THR
159
n
159
THR
159
A
LEU
160
n
160
LEU
160
A
GLY
161
n
161
GLY
161
A
ALA
162
n
162
ALA
162
A
MET
163
n
163
MET
163
A
ASN
164
n
164
ASN
164
A
ASN
165
n
165
ASN
165
A
ASN
166
n
166
ASN
166
A
THR
167
n
167
THR
167
A
SER
168
n
168
SER
168
A
SER
169
n
169
SER
169
A
ILE
170
n
170
ILE
170
A
ARG
171
n
171
ARG
171
A
ILE
172
n
172
ILE
172
A
SER
173
n
173
SER
173
A
author_defined_assembly
1
monomeric
A
GLU
10
A
OE1
GLU
10
1_555
A
CA
174
B
CA
CA
1_555
A
GLU
10
A
OE2
GLU
10
1_555
42.4
A
GLU
10
A
OE1
GLU
10
1_555
A
CA
174
B
CA
CA
1_555
A
GLU
71
A
OE2
GLU
71
1_555
140.7
A
GLU
10
A
OE2
GLU
10
1_555
A
CA
174
B
CA
CA
1_555
A
GLU
71
A
OE2
GLU
71
1_555
136.4
A
GLU
99
A
OE2
GLU
99
1_555
A
CA
175
C
CA
CA
1_555
A
THR
159
A
OG1
THR
159
1_555
151.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
HH22
H
ARG
VAL
83
84
1.10
1
A
A
CE2
NE2
PHE
GLN
7
16
2.18
1
A
ARG
26
0.225
SIDE CHAIN
1
A
ARG
83
0.315
SIDE CHAIN
1
A
ARG
92
0.216
SIDE CHAIN
1
A
ARG
94
0.280
SIDE CHAIN
1
A
ARG
120
0.265
SIDE CHAIN
1
A
ARG
171
0.087
SIDE CHAIN
1
16.22
2.20
113.40
129.62
A
A
A
CA
CB
CG
ASN
ASN
ASN
166
166
166
N
1
A
ASN
3
179.96
123.71
1
A
ASP
11
70.97
34.02
1
A
PHE
12
60.50
-2.33
1
A
LYS
15
-33.29
143.09
1
A
PRO
21
-58.65
-167.54
1
A
LEU
32
-75.11
-73.29
1
A
ASN
36
62.87
-137.70
1
A
THR
38
-154.69
-24.54
1
A
ILE
39
-78.11
44.14
1
A
PRO
46
-62.74
-178.38
1
A
GLN
54
-45.99
-84.55
1
A
ASP
56
-58.02
-177.16
1
A
VAL
66
-141.12
-12.05
1
A
ALA
67
-117.74
-156.66
1
A
GLU
70
-73.80
-75.76
1
A
LEU
72
66.74
-81.88
1
A
ASN
78
-170.32
122.43
1
A
SER
80
-175.27
-40.96
1
A
PRO
91
-59.36
-162.89
1
A
ARG
92
-177.57
-161.64
1
A
TYR
97
-101.54
-80.77
1
A
GLU
99
-69.67
94.80
1
A
GLN
100
134.19
49.73
1
A
PHE
101
32.25
32.99
1
A
LYS
104
-32.95
139.75
1
A
THR
114
-93.04
-148.79
1
A
ALA
116
-99.61
-62.47
1
A
LEU
118
-34.49
-70.74
1
A
ARG
120
-75.79
20.70
1
A
ILE
123
-139.15
-106.57
1
A
ASP
124
-172.36
-158.78
1
A
ASN
125
-58.13
-81.02
1
A
THR
127
173.97
-0.87
1
A
ILE
128
-67.95
-82.58
1
A
SER
129
76.35
-136.59
1
A
SER
130
-38.54
128.98
1
A
LYS
142
-63.03
-76.99
1
A
ASN
143
-56.92
-178.92
1
A
ASP
144
-64.47
-144.26
1
A
ASN
145
-13.37
73.81
1
A
PHE
146
31.76
64.50
1
A
SER
155
-170.39
-178.12
1
A
ALA
157
-157.21
63.99
1
A
PRO
158
-65.56
23.45
1
A
THR
159
-170.00
96.57
1
A
LEU
160
-123.79
-53.62
1
A
MET
163
-142.08
-68.38
1
A
ASN
164
-91.34
-108.45
1
A
ASN
165
-153.63
-43.25
1
A
ASN
166
-179.16
95.42
1
A
SER
168
-95.84
-61.97
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
NMR-DERIVED THREE-DIMENSIONAL SOLUTION STRUCTURE OF PROTEIN S COMPLEXED WITH CALCIUM
1
Y
N
2
N
N
2
N
N
A
ARG
26
A
ARG
26
HELX_P
A
GLY
33
A
GLY
33
1
H1
8
A
GLN
115
A
GLN
115
HELX_P
A
GLY
122
A
GLY
122
1
H2
8
metalc
3.134
A
GLU
10
A
OE1
GLU
10
1_555
A
CA
174
B
CA
CA
1_555
metalc
1.755
A
GLU
10
A
OE2
GLU
10
1_555
A
CA
174
B
CA
CA
1_555
metalc
3.317
A
GLU
71
A
OE2
GLU
71
1_555
A
CA
174
B
CA
CA
1_555
metalc
2.114
A
GLU
99
A
OE2
GLU
99
1_555
A
CA
175
C
CA
CA
1_555
metalc
2.878
A
THR
159
A
OG1
THR
159
1_555
A
CA
175
C
CA
CA
1_555
BINDING PROTEIN
BINDING PROTEIN
DESS_MYXXA
UNP
1
1
P02966
MANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVS
SIRVISVPVQPRARFFYKEQFDGKEVDLPPGQYTQAELERYGIDNNTISSVKPQGLAVVLFKNDNFSGDTLPVNSDAPTL
GAMNNNTSSIRIS
1
173
1PRR
1
173
P02966
A
1
1
173
4
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
15
A
LYS
15
A
PRO
20
A
PRO
20
A
ASN
3
A
ASN
3
A
TYR
8
A
TYR
8
A
SER
41
A
SER
41
A
VAL
44
A
VAL
44
A
ASN
68
A
ASN
68
A
GLU
70
A
GLU
70
A
GLY
22
A
GLY
22
A
TYR
24
A
TYR
24
A
SER
81
A
SER
81
A
SER
86
A
SER
86
A
VAL
48
A
VAL
48
A
TYR
53
A
TYR
53
A
ASP
61
A
ASP
61
A
VAL
65
A
VAL
65
A
LYS
104
A
LYS
104
A
PRO
109
A
PRO
109
A
ARG
92
A
ARG
92
A
TYR
97
A
TYR
97
A
SER
130
A
SER
130
A
PRO
133
A
PRO
133
A
ASP
156
A
ASP
156
A
PRO
158
A
PRO
158
A
GLY
111
A
GLY
111
A
THR
114
A
THR
114
A
SER
169
A
SER
169
A
SER
173
A
SER
173
A
ALA
137
A
ALA
137
A
PHE
141
A
PHE
141
A
ASP
149
A
ASP
149
A
ASN
154
A
ASN
154
BINDING SITE FOR RESIDUE CA A 174
A
CA
174
Software
2
BINDING SITE FOR RESIDUE CA A 175
A
CA
175
Software
2
A
GLU
10
A
GLU
10
2
1_555
A
GLU
71
A
GLU
71
2
1_555
A
GLU
99
A
GLU
99
2
1_555
A
THR
159
A
THR
159
2
1_555
1
P 1