1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 SURFACE LOOPS AT RESIDUES 33 - 40, 72 - 80, 123 - 129, AND 159 - 168 ARE RELATIVELY POORLY DEFINED. Bagby, S. Harvey, T.S. Eagle, S.G. Inouye, S. Ikura, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 2 107 122 10.1016/S0969-2126(00)00013-7 8081742 NMR-derived three-dimensional solution structure of protein S complexed with calcium. 1994 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 91 4308 Structural Similarity of a Developmentally Regulated Bacterial Spore Coat Protein to Betagamma-Crystallins of the Vertebrate Eye Lens 1994 US Biochemistry BICHAW 0033 0006-2960 33 2409 Unusual Helix-Containing Greek Keys in Development-Specific Ca2+-Binding Protein S. 1H, 15N and 13C Assignments and Secondary Structure Determined Using Multidimensional Double and Triple Resonance Heteronuclear NMR Spectroscopy 1994 10.2210/pdb1prr/pdb pdb_00001prr 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 18805.865 DEVELOPMENT-SPECIFIC PROTEIN S 1 man polymer 40.078 CALCIUM ION 2 syn non-polymer no no MANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVS SIRVISVPVQPRARFFYKEQFDGKEVDLPPGQYTQAELERYGIDNNTISSVKPQGLAVVLFKNDNFSGDTLPVNSDAPTL GAMNNNTSSIRIS MANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVS SIRVISVPVQPRARFFYKEQFDGKEVDLPPGQYTQAELERYGIDNNTISSVKPQGLAVVLFKNDNFSGDTLPVNSDAPTL GAMNNNTSSIRIS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Myxococcus sample 34 Myxococcus xanthus database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1994-08-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-03-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1994-03-25 REL CA CALCIUM ION 1 BRUNGER refinement X-PLOR CA 174 2 CA CA 174 A CA 175 2 CA CA 175 A MET 1 n 1 MET 1 A ALA 2 n 2 ALA 2 A ASN 3 n 3 ASN 3 A ILE 4 n 4 ILE 4 A THR 5 n 5 THR 5 A VAL 6 n 6 VAL 6 A PHE 7 n 7 PHE 7 A TYR 8 n 8 TYR 8 A ASN 9 n 9 ASN 9 A GLU 10 n 10 GLU 10 A ASP 11 n 11 ASP 11 A PHE 12 n 12 PHE 12 A GLN 13 n 13 GLN 13 A GLY 14 n 14 GLY 14 A LYS 15 n 15 LYS 15 A GLN 16 n 16 GLN 16 A VAL 17 n 17 VAL 17 A ASP 18 n 18 ASP 18 A LEU 19 n 19 LEU 19 A PRO 20 n 20 PRO 20 A PRO 21 n 21 PRO 21 A GLY 22 n 22 GLY 22 A ASN 23 n 23 ASN 23 A TYR 24 n 24 TYR 24 A THR 25 n 25 THR 25 A ARG 26 n 26 ARG 26 A ALA 27 n 27 ALA 27 A GLN 28 n 28 GLN 28 A LEU 29 n 29 LEU 29 A ALA 30 n 30 ALA 30 A ALA 31 n 31 ALA 31 A LEU 32 n 32 LEU 32 A GLY 33 n 33 GLY 33 A ILE 34 n 34 ILE 34 A GLU 35 n 35 GLU 35 A ASN 36 n 36 ASN 36 A ASN 37 n 37 ASN 37 A THR 38 n 38 THR 38 A ILE 39 n 39 ILE 39 A SER 40 n 40 SER 40 A SER 41 n 41 SER 41 A VAL 42 n 42 VAL 42 A LYS 43 n 43 LYS 43 A VAL 44 n 44 VAL 44 A PRO 45 n 45 PRO 45 A PRO 46 n 46 PRO 46 A GLY 47 n 47 GLY 47 A VAL 48 n 48 VAL 48 A LYS 49 n 49 LYS 49 A ALA 50 n 50 ALA 50 A ILE 51 n 51 ILE 51 A LEU 52 n 52 LEU 52 A TYR 53 n 53 TYR 53 A GLN 54 n 54 GLN 54 A ASN 55 n 55 ASN 55 A ASP 56 n 56 ASP 56 A GLY 57 n 57 GLY 57 A PHE 58 n 58 PHE 58 A ALA 59 n 59 ALA 59 A GLY 60 n 60 GLY 60 A ASP 61 n 61 ASP 61 A GLN 62 n 62 GLN 62 A ILE 63 n 63 ILE 63 A GLU 64 n 64 GLU 64 A VAL 65 n 65 VAL 65 A VAL 66 n 66 VAL 66 A ALA 67 n 67 ALA 67 A ASN 68 n 68 ASN 68 A ALA 69 n 69 ALA 69 A GLU 70 n 70 GLU 70 A GLU 71 n 71 GLU 71 A LEU 72 n 72 LEU 72 A GLY 73 n 73 GLY 73 A PRO 74 n 74 PRO 74 A LEU 75 n 75 LEU 75 A ASN 76 n 76 ASN 76 A ASN 77 n 77 ASN 77 A ASN 78 n 78 ASN 78 A VAL 79 n 79 VAL 79 A SER 80 n 80 SER 80 A SER 81 n 81 SER 81 A ILE 82 n 82 ILE 82 A ARG 83 n 83 ARG 83 A VAL 84 n 84 VAL 84 A ILE 85 n 85 ILE 85 A SER 86 n 86 SER 86 A VAL 87 n 87 VAL 87 A PRO 88 n 88 PRO 88 A VAL 89 n 89 VAL 89 A GLN 90 n 90 GLN 90 A PRO 91 n 91 PRO 91 A ARG 92 n 92 ARG 92 A ALA 93 n 93 ALA 93 A ARG 94 n 94 ARG 94 A PHE 95 n 95 PHE 95 A PHE 96 n 96 PHE 96 A TYR 97 n 97 TYR 97 A LYS 98 n 98 LYS 98 A GLU 99 n 99 GLU 99 A GLN 100 n 100 GLN 100 A PHE 101 n 101 PHE 101 A ASP 102 n 102 ASP 102 A GLY 103 n 103 GLY 103 A LYS 104 n 104 LYS 104 A GLU 105 n 105 GLU 105 A VAL 106 n 106 VAL 106 A ASP 107 n 107 ASP 107 A LEU 108 n 108 LEU 108 A PRO 109 n 109 PRO 109 A PRO 110 n 110 PRO 110 A GLY 111 n 111 GLY 111 A GLN 112 n 112 GLN 112 A TYR 113 n 113 TYR 113 A THR 114 n 114 THR 114 A GLN 115 n 115 GLN 115 A ALA 116 n 116 ALA 116 A GLU 117 n 117 GLU 117 A LEU 118 n 118 LEU 118 A GLU 119 n 119 GLU 119 A ARG 120 n 120 ARG 120 A TYR 121 n 121 TYR 121 A GLY 122 n 122 GLY 122 A ILE 123 n 123 ILE 123 A ASP 124 n 124 ASP 124 A ASN 125 n 125 ASN 125 A ASN 126 n 126 ASN 126 A THR 127 n 127 THR 127 A ILE 128 n 128 ILE 128 A SER 129 n 129 SER 129 A SER 130 n 130 SER 130 A VAL 131 n 131 VAL 131 A LYS 132 n 132 LYS 132 A PRO 133 n 133 PRO 133 A GLN 134 n 134 GLN 134 A GLY 135 n 135 GLY 135 A LEU 136 n 136 LEU 136 A ALA 137 n 137 ALA 137 A VAL 138 n 138 VAL 138 A VAL 139 n 139 VAL 139 A LEU 140 n 140 LEU 140 A PHE 141 n 141 PHE 141 A LYS 142 n 142 LYS 142 A ASN 143 n 143 ASN 143 A ASP 144 n 144 ASP 144 A ASN 145 n 145 ASN 145 A PHE 146 n 146 PHE 146 A SER 147 n 147 SER 147 A GLY 148 n 148 GLY 148 A ASP 149 n 149 ASP 149 A THR 150 n 150 THR 150 A LEU 151 n 151 LEU 151 A PRO 152 n 152 PRO 152 A VAL 153 n 153 VAL 153 A ASN 154 n 154 ASN 154 A SER 155 n 155 SER 155 A ASP 156 n 156 ASP 156 A ALA 157 n 157 ALA 157 A PRO 158 n 158 PRO 158 A THR 159 n 159 THR 159 A LEU 160 n 160 LEU 160 A GLY 161 n 161 GLY 161 A ALA 162 n 162 ALA 162 A MET 163 n 163 MET 163 A ASN 164 n 164 ASN 164 A ASN 165 n 165 ASN 165 A ASN 166 n 166 ASN 166 A THR 167 n 167 THR 167 A SER 168 n 168 SER 168 A SER 169 n 169 SER 169 A ILE 170 n 170 ILE 170 A ARG 171 n 171 ARG 171 A ILE 172 n 172 ILE 172 A SER 173 n 173 SER 173 A author_defined_assembly 1 monomeric A GLU 10 A OE1 GLU 10 1_555 A CA 174 B CA CA 1_555 A GLU 10 A OE2 GLU 10 1_555 42.4 A GLU 10 A OE1 GLU 10 1_555 A CA 174 B CA CA 1_555 A GLU 71 A OE2 GLU 71 1_555 140.7 A GLU 10 A OE2 GLU 10 1_555 A CA 174 B CA CA 1_555 A GLU 71 A OE2 GLU 71 1_555 136.4 A GLU 99 A OE2 GLU 99 1_555 A CA 175 C CA CA 1_555 A THR 159 A OG1 THR 159 1_555 151.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A HH22 H ARG VAL 83 84 1.10 1 A A CE2 NE2 PHE GLN 7 16 2.18 1 A ARG 26 0.225 SIDE CHAIN 1 A ARG 83 0.315 SIDE CHAIN 1 A ARG 92 0.216 SIDE CHAIN 1 A ARG 94 0.280 SIDE CHAIN 1 A ARG 120 0.265 SIDE CHAIN 1 A ARG 171 0.087 SIDE CHAIN 1 16.22 2.20 113.40 129.62 A A A CA CB CG ASN ASN ASN 166 166 166 N 1 A ASN 3 179.96 123.71 1 A ASP 11 70.97 34.02 1 A PHE 12 60.50 -2.33 1 A LYS 15 -33.29 143.09 1 A PRO 21 -58.65 -167.54 1 A LEU 32 -75.11 -73.29 1 A ASN 36 62.87 -137.70 1 A THR 38 -154.69 -24.54 1 A ILE 39 -78.11 44.14 1 A PRO 46 -62.74 -178.38 1 A GLN 54 -45.99 -84.55 1 A ASP 56 -58.02 -177.16 1 A VAL 66 -141.12 -12.05 1 A ALA 67 -117.74 -156.66 1 A GLU 70 -73.80 -75.76 1 A LEU 72 66.74 -81.88 1 A ASN 78 -170.32 122.43 1 A SER 80 -175.27 -40.96 1 A PRO 91 -59.36 -162.89 1 A ARG 92 -177.57 -161.64 1 A TYR 97 -101.54 -80.77 1 A GLU 99 -69.67 94.80 1 A GLN 100 134.19 49.73 1 A PHE 101 32.25 32.99 1 A LYS 104 -32.95 139.75 1 A THR 114 -93.04 -148.79 1 A ALA 116 -99.61 -62.47 1 A LEU 118 -34.49 -70.74 1 A ARG 120 -75.79 20.70 1 A ILE 123 -139.15 -106.57 1 A ASP 124 -172.36 -158.78 1 A ASN 125 -58.13 -81.02 1 A THR 127 173.97 -0.87 1 A ILE 128 -67.95 -82.58 1 A SER 129 76.35 -136.59 1 A SER 130 -38.54 128.98 1 A LYS 142 -63.03 -76.99 1 A ASN 143 -56.92 -178.92 1 A ASP 144 -64.47 -144.26 1 A ASN 145 -13.37 73.81 1 A PHE 146 31.76 64.50 1 A SER 155 -170.39 -178.12 1 A ALA 157 -157.21 63.99 1 A PRO 158 -65.56 23.45 1 A THR 159 -170.00 96.57 1 A LEU 160 -123.79 -53.62 1 A MET 163 -142.08 -68.38 1 A ASN 164 -91.34 -108.45 1 A ASN 165 -153.63 -43.25 1 A ASN 166 -179.16 95.42 1 A SER 168 -95.84 -61.97 model building X-PLOR refinement X-PLOR phasing X-PLOR NMR-DERIVED THREE-DIMENSIONAL SOLUTION STRUCTURE OF PROTEIN S COMPLEXED WITH CALCIUM 1 Y N 2 N N 2 N N A ARG 26 A ARG 26 HELX_P A GLY 33 A GLY 33 1 H1 8 A GLN 115 A GLN 115 HELX_P A GLY 122 A GLY 122 1 H2 8 metalc 3.134 A GLU 10 A OE1 GLU 10 1_555 A CA 174 B CA CA 1_555 metalc 1.755 A GLU 10 A OE2 GLU 10 1_555 A CA 174 B CA CA 1_555 metalc 3.317 A GLU 71 A OE2 GLU 71 1_555 A CA 174 B CA CA 1_555 metalc 2.114 A GLU 99 A OE2 GLU 99 1_555 A CA 175 C CA CA 1_555 metalc 2.878 A THR 159 A OG1 THR 159 1_555 A CA 175 C CA CA 1_555 BINDING PROTEIN BINDING PROTEIN DESS_MYXXA UNP 1 1 P02966 MANITVFYNEDFQGKQVDLPPGNYTRAQLAALGIENNTISSVKVPPGVKAILYQNDGFAGDQIEVVANAEELGPLNNNVS SIRVISVPVQPRARFFYKEQFDGKEVDLPPGQYTQAELERYGIDNNTISSVKPQGLAVVLFKNDNFSGDTLPVNSDAPTL GAMNNNTSSIRIS 1 173 1PRR 1 173 P02966 A 1 1 173 4 4 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 15 A LYS 15 A PRO 20 A PRO 20 A ASN 3 A ASN 3 A TYR 8 A TYR 8 A SER 41 A SER 41 A VAL 44 A VAL 44 A ASN 68 A ASN 68 A GLU 70 A GLU 70 A GLY 22 A GLY 22 A TYR 24 A TYR 24 A SER 81 A SER 81 A SER 86 A SER 86 A VAL 48 A VAL 48 A TYR 53 A TYR 53 A ASP 61 A ASP 61 A VAL 65 A VAL 65 A LYS 104 A LYS 104 A PRO 109 A PRO 109 A ARG 92 A ARG 92 A TYR 97 A TYR 97 A SER 130 A SER 130 A PRO 133 A PRO 133 A ASP 156 A ASP 156 A PRO 158 A PRO 158 A GLY 111 A GLY 111 A THR 114 A THR 114 A SER 169 A SER 169 A SER 173 A SER 173 A ALA 137 A ALA 137 A PHE 141 A PHE 141 A ASP 149 A ASP 149 A ASN 154 A ASN 154 BINDING SITE FOR RESIDUE CA A 174 A CA 174 Software 2 BINDING SITE FOR RESIDUE CA A 175 A CA 175 Software 2 A GLU 10 A GLU 10 2 1_555 A GLU 71 A GLU 71 2 1_555 A GLU 99 A GLU 99 2 1_555 A THR 159 A THR 159 2 1_555 1 P 1