1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Nagadoi, A. Morikawa, S. Nakamura, H. Enari, M. Kobayashi, K. Yamamoto, H. Sampei, G. Mizobuchi, K. Schumacher, M.A. Brennan, R.G. Nishimura, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 3 1217 1224 10.1016/S0969-2126(01)00257-X 8591032 Structural comparison of the free and DNA-bound forms of the purine repressor DNA-binding domain. 1995 US Science SCIEAS 0038 0036-8075 266 763 Crystal Structure of LacI Member, PurR, Bound to DNA: Minor Groove Binding by Alpha Helices 1994 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 6179.133 PURINE REPRESSOR DNA-BINDING 1 man polymer no no MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKV MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia Escherichia coli sample 562 Escherichia coli PURR 511693 Escherichia coli BL21 BL21 PAR2156NCOI repository Initial release Version format compliance Version format compliance Database references 1 0 1996-03-08 1 1 2008-03-24 1 2 2011-07-13 1 3 2012-02-22 Y 1995-05-08 REL REL 20 NAKAI,KIDERA,NAKAMURA refinement EMBOSS MORIKAMI,NAKAI,KIDERA,SAITO,NAKAMURA refinement PRESTO MET 1 n 1 MET 1 A ALA 2 n 2 ALA 2 A THR 3 n 3 THR 3 A ILE 4 n 4 ILE 4 A LYS 5 n 5 LYS 5 A ASP 6 n 6 ASP 6 A VAL 7 n 7 VAL 7 A ALA 8 n 8 ALA 8 A LYS 9 n 9 LYS 9 A ARG 10 n 10 ARG 10 A ALA 11 n 11 ALA 11 A ASN 12 n 12 ASN 12 A VAL 13 n 13 VAL 13 A SER 14 n 14 SER 14 A THR 15 n 15 THR 15 A THR 16 n 16 THR 16 A THR 17 n 17 THR 17 A VAL 18 n 18 VAL 18 A SER 19 n 19 SER 19 A HIS 20 n 20 HIS 20 A VAL 21 n 21 VAL 21 A ILE 22 n 22 ILE 22 A ASN 23 n 23 ASN 23 A LYS 24 n 24 LYS 24 A THR 25 n 25 THR 25 A ARG 26 n 26 ARG 26 A PHE 27 n 27 PHE 27 A VAL 28 n 28 VAL 28 A ALA 29 n 29 ALA 29 A GLU 30 n 30 GLU 30 A GLU 31 n 31 GLU 31 A THR 32 n 32 THR 32 A ARG 33 n 33 ARG 33 A ASN 34 n 34 ASN 34 A ALA 35 n 35 ALA 35 A VAL 36 n 36 VAL 36 A TRP 37 n 37 TRP 37 A ALA 38 n 38 ALA 38 A ALA 39 n 39 ALA 39 A ILE 40 n 40 ILE 40 A LYS 41 n 41 LYS 41 A GLU 42 n 42 GLU 42 A LEU 43 n 43 LEU 43 A HIS 44 n 44 HIS 44 A TYR 45 n 45 TYR 45 A SER 46 n 46 SER 46 A PRO 47 n 47 PRO 47 A SER 48 n 48 SER 48 A ALA 49 n 49 ALA 49 A VAL 50 n 50 VAL 50 A ALA 51 n 51 ALA 51 A ARG 52 n 52 ARG 52 A SER 53 n 53 SER 53 A LEU 54 n 54 LEU 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ARG 33 0.079 SIDE CHAIN 2 A ARG 10 0.081 SIDE CHAIN 6 A ARG 33 0.084 SIDE CHAIN 7 A ARG 33 0.145 SIDE CHAIN 15 A ARG 33 0.108 SIDE CHAIN 20 A ARG 33 0.080 SIDE CHAIN 1 A THR 3 -158.00 -64.74 1 A ILE 4 -152.03 -40.76 1 A ASN 12 -123.66 -145.41 1 A GLU 30 69.08 -32.16 1 A HIS 44 65.03 118.72 1 A TYR 45 -156.46 50.32 1 A ALA 49 64.78 91.00 1 A ARG 52 -163.26 -143.80 1 A SER 53 -169.11 112.60 1 A LYS 55 57.20 -148.52 2 A ALA 2 71.47 146.20 2 A THR 3 -163.10 -51.78 2 A ASN 12 60.90 63.11 2 A VAL 13 -137.20 -109.48 2 A LYS 24 -153.74 -89.89 2 A THR 25 173.53 -41.75 2 A PHE 27 74.19 126.18 2 A GLU 30 68.50 -65.81 2 A TYR 45 32.42 57.95 2 A ALA 49 -148.77 -47.54 2 A ALA 51 -161.91 -42.80 2 A ARG 52 -146.94 -145.10 2 A SER 53 -172.26 -62.22 3 A THR 3 -123.89 -59.93 3 A THR 15 179.71 -33.02 3 A THR 25 -115.55 -87.06 3 A ARG 26 -94.73 54.60 3 A ALA 29 54.55 -143.33 3 A LEU 43 -72.38 -92.32 3 A HIS 44 -158.79 18.00 3 A SER 46 -158.64 85.72 3 A ALA 51 -165.46 -112.19 4 A ALA 2 -65.49 80.58 4 A THR 3 -156.82 29.33 4 A TYR 45 -58.64 108.23 4 A SER 48 73.78 105.12 4 A ALA 49 69.84 -175.44 4 A ARG 52 76.65 -55.48 4 A LYS 55 -159.76 41.73 5 A ASN 12 75.07 149.19 5 A VAL 13 64.02 -86.60 5 A SER 14 -174.88 -162.74 5 A LYS 24 70.56 60.09 5 A THR 25 -87.33 -80.35 5 A ARG 52 -155.83 -138.60 5 A LYS 55 56.21 73.83 6 A ASN 12 85.26 145.91 6 A VAL 13 65.24 -116.60 6 A SER 14 -166.25 -161.69 6 A ALA 29 60.73 -179.91 6 A HIS 44 76.93 134.28 6 A PRO 47 -69.63 72.73 7 A ASN 12 -147.94 -82.65 7 A VAL 13 -140.68 -66.87 7 A LYS 24 174.08 102.90 7 A ARG 26 74.68 -164.00 7 A HIS 44 73.87 138.47 7 A PRO 47 -68.67 -172.59 7 A LEU 54 55.39 -105.07 8 A ALA 2 -161.10 59.18 8 A ASN 12 76.53 -35.79 8 A GLU 30 72.56 -65.64 8 A LEU 43 -83.78 -82.54 8 A HIS 44 161.80 145.31 8 A VAL 50 68.30 149.03 8 A LEU 54 56.43 72.54 9 A ASN 12 -135.74 -121.36 9 A SER 14 -167.48 -164.04 9 A HIS 44 40.62 84.18 9 A TYR 45 -56.69 108.12 9 A SER 46 -165.65 85.13 10 A ALA 2 -67.26 96.69 10 A THR 3 -142.42 -77.89 10 A ILE 4 -140.44 -32.77 10 A ASN 12 -140.79 -88.36 10 A VAL 13 -139.47 -57.35 10 A THR 25 -98.24 -84.40 10 A ALA 29 65.11 -178.89 10 A HIS 44 76.17 137.62 10 A ARG 52 -153.53 50.52 10 A LYS 55 55.50 -121.22 11 A ALA 2 -163.53 -79.12 11 A THR 3 178.01 -42.52 11 A ILE 4 -146.34 -20.56 11 A LYS 5 -48.01 -70.26 11 A GLU 30 65.82 -26.65 11 A LEU 43 -92.99 -94.03 11 A HIS 44 -159.79 26.41 11 A SER 46 -167.21 76.60 11 A ALA 49 -167.93 -56.01 11 A ALA 51 -169.24 -58.55 12 A ILE 4 80.53 -23.88 12 A ASN 12 -164.15 -93.73 12 A VAL 13 -97.94 -118.63 12 A LYS 24 71.45 53.09 12 A GLU 30 63.79 -68.68 12 A LEU 43 -77.64 -92.00 12 A HIS 44 165.30 75.87 12 A ARG 52 -165.07 -141.27 13 A ALA 2 -53.57 -77.93 13 A THR 3 64.23 167.75 13 A ILE 4 77.75 -40.79 13 A ASN 12 75.52 150.83 13 A VAL 13 82.94 175.10 13 A LYS 24 30.15 65.39 13 A THR 25 -104.44 -83.70 13 A ALA 29 65.26 176.25 13 A HIS 44 71.73 110.66 13 A ALA 51 -153.00 84.73 14 A THR 3 -135.01 -53.08 14 A ILE 4 -177.19 -35.52 14 A ASN 12 179.99 131.00 14 A VAL 13 52.18 -94.52 14 A THR 25 -97.95 -82.89 14 A ARG 52 -158.21 38.25 14 A LYS 55 -139.63 -51.71 15 A ALA 2 60.43 -173.91 15 A THR 3 84.51 -176.75 15 A ASN 12 -155.12 -147.67 15 A HIS 44 76.18 128.48 15 A SER 46 8.38 -81.04 15 A SER 48 63.28 175.97 15 A ALA 51 -148.68 -142.78 15 A ARG 52 -165.46 -46.53 15 A SER 53 -174.01 -68.38 15 A LEU 54 64.19 -175.98 16 A THR 3 -158.69 -46.92 16 A ILE 4 159.07 -37.03 16 A ASN 12 -156.28 -137.16 16 A THR 25 -109.63 -79.98 16 A HIS 44 69.43 130.98 16 A TYR 45 -156.77 -139.10 16 A ALA 51 -159.52 -141.19 16 A ARG 52 -123.14 -63.69 16 A SER 53 -169.97 -63.14 17 A ALA 2 -161.71 -73.34 17 A THR 3 65.64 131.94 17 A ILE 4 74.58 -35.32 17 A ASN 12 70.74 -84.90 17 A VAL 13 29.44 -125.20 17 A SER 14 -175.25 84.52 17 A THR 15 50.70 -2.50 17 A ALA 29 -79.18 40.93 17 A GLU 30 63.95 -74.58 17 A TYR 45 -71.67 29.54 17 A SER 46 42.75 79.00 17 A ALA 49 58.41 -91.26 17 A ALA 51 -161.39 -47.74 17 A LYS 55 56.34 -111.69 18 A THR 3 -148.60 -56.51 18 A ASN 12 -171.25 139.78 18 A VAL 13 23.32 -87.30 18 A ALA 29 59.44 13.40 18 A GLU 30 71.17 -55.93 18 A HIS 44 73.78 121.98 18 A SER 46 -154.80 69.23 18 A ARG 52 -160.04 78.74 18 A SER 53 55.86 -96.84 18 A LYS 55 75.42 -60.55 19 A ALA 2 62.21 178.09 19 A THR 3 78.58 -29.04 19 A ASN 12 -177.58 -88.24 19 A VAL 13 -69.23 -86.38 19 A SER 14 -158.48 -157.94 19 A ASN 23 -167.60 31.53 19 A LYS 24 -158.74 40.11 19 A ARG 26 57.36 -158.94 19 A TYR 45 52.10 82.78 19 A SER 53 -148.41 36.86 20 A ALA 2 -162.77 -88.26 20 A THR 3 77.78 178.95 20 A ASN 12 -170.91 126.34 20 A VAL 13 51.68 -91.31 20 A THR 25 -96.25 -80.18 20 A ALA 39 -131.14 -46.63 20 A GLU 42 -138.77 -55.75 20 A HIS 44 78.39 149.95 20 A LEU 54 50.54 -125.57 refinement AMBER PURINE REPRESSOR PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING 1 Y N A ILE 4 A ILE 4 HELX_P A ALA 11 A ALA 11 1 H1 8 A THR 15 A THR 15 HELX_P A ASN 23 A ASN 23 1 H2 9 A GLU 30 A GLU 30 HELX_P A GLU 42 A GLU 42 1 H3 13 DNA BINDING PROTEIN PURINE REPRESSOR, DNA-BINDING PROTEIN PURR_ECOLI UNP 1 1 P0ACP7 ATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAV EKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDN AFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPT AVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEV HPRLIERRSVADGPFRDYRR 1 55 1PRV 2 56 P0ACP7 A 1 2 56 1 P 1