0.009803
0.000000
0.004963
0.000000
0.020041
0.000000
0.000000
0.000000
0.013726
0.00000
0.00000
0.00000
Kniewel, R.
Buglino, J.
Solorzano, V.
Wu, J.
Lima, C.D.
0000-0002-2487-9713
Burley, S.K.
New York SGX Research Center for Structural Genomics (NYSGXRC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
116.85
90.00
102.005
49.897
81.660
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Structure of a probable thiol peroxidase from Streptococcus pneumoniae
100
1
CCD
2003-05-26
MARRESEARCH
Si 111 CHANNEL
SAD
M
x-ray
1
0.9798
1.0
X9A
NSLS
0.9798
SYNCHROTRON
NSLS BEAMLINE X9A
18177.062
probable thiol peroxidase
1.11.1.-
2
man
polymer
18.015
water
253
nat
water
E.C.1.11.1.-
no
yes
(MSE)VTFLGNPVSFTGKQLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTV
VLTVS(MSE)DLPFAQKRWCGAEGLDNAI(MSE)LSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNIN
SEPNFEAAIAAAKAL
MVTFLGNPVSFTGKQLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTV
SMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAA
KAL
A,B
NYSGXRC-T817
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Streptococcus
Escherichia
sample
TPX
1313
Streptococcus pneumoniae
562
Escherichia coli
B834 DE3
plasmid
PET T7
1
2.37
47.7
VAPOR DIFFUSION, HANGING DROP
1.033M ammonium sulfate, 1.2M lithium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
New York SGX Research Center for Structural Genomics
NYSGXRC
PSI, Protein Structure Initiative
audit_author
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Database references
Derived calculations
Structure summary
1
0
2003-07-08
1
1
2008-04-29
1
2
2011-07-13
1
3
2011-11-16
1
4
2021-02-03
_audit_author.identifier_ORCID
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2003-06-21
REL
REL
HOH
water
HOH
2
2
HOH
HOH
164
A
HOH
3
2
HOH
HOH
165
A
HOH
4
2
HOH
HOH
166
A
HOH
5
2
HOH
HOH
167
A
HOH
7
2
HOH
HOH
168
A
HOH
8
2
HOH
HOH
169
A
HOH
10
2
HOH
HOH
170
A
HOH
15
2
HOH
HOH
171
A
HOH
16
2
HOH
HOH
172
A
HOH
17
2
HOH
HOH
173
A
HOH
18
2
HOH
HOH
174
A
HOH
19
2
HOH
HOH
175
A
HOH
22
2
HOH
HOH
176
A
HOH
23
2
HOH
HOH
177
A
HOH
25
2
HOH
HOH
178
A
HOH
26
2
HOH
HOH
179
A
HOH
27
2
HOH
HOH
180
A
HOH
29
2
HOH
HOH
181
A
HOH
31
2
HOH
HOH
182
A
HOH
32
2
HOH
HOH
183
A
HOH
34
2
HOH
HOH
184
A
HOH
36
2
HOH
HOH
185
A
HOH
37
2
HOH
HOH
186
A
HOH
38
2
HOH
HOH
187
A
HOH
39
2
HOH
HOH
188
A
HOH
42
2
HOH
HOH
189
A
HOH
43
2
HOH
HOH
190
A
HOH
46
2
HOH
HOH
191
A
HOH
51
2
HOH
HOH
192
A
HOH
54
2
HOH
HOH
193
A
HOH
58
2
HOH
HOH
194
A
HOH
59
2
HOH
HOH
195
A
HOH
61
2
HOH
HOH
196
A
HOH
62
2
HOH
HOH
197
A
HOH
65
2
HOH
HOH
198
A
HOH
67
2
HOH
HOH
199
A
HOH
73
2
HOH
HOH
200
A
HOH
74
2
HOH
HOH
201
A
HOH
77
2
HOH
HOH
202
A
HOH
78
2
HOH
HOH
203
A
HOH
81
2
HOH
HOH
204
A
HOH
82
2
HOH
HOH
205
A
HOH
84
2
HOH
HOH
206
A
HOH
86
2
HOH
HOH
207
A
HOH
87
2
HOH
HOH
208
A
HOH
89
2
HOH
HOH
209
A
HOH
90
2
HOH
HOH
210
A
HOH
95
2
HOH
HOH
211
A
HOH
98
2
HOH
HOH
212
A
HOH
99
2
HOH
HOH
213
A
HOH
102
2
HOH
HOH
214
A
HOH
103
2
HOH
HOH
215
A
HOH
104
2
HOH
HOH
216
A
HOH
105
2
HOH
HOH
217
A
HOH
106
2
HOH
HOH
218
A
HOH
107
2
HOH
HOH
219
A
HOH
110
2
HOH
HOH
220
A
HOH
113
2
HOH
HOH
221
A
HOH
115
2
HOH
HOH
222
A
HOH
116
2
HOH
HOH
223
A
HOH
117
2
HOH
HOH
224
A
HOH
119
2
HOH
HOH
225
A
HOH
120
2
HOH
HOH
226
A
HOH
121
2
HOH
HOH
227
A
HOH
122
2
HOH
HOH
228
A
HOH
124
2
HOH
HOH
229
A
HOH
125
2
HOH
HOH
230
A
HOH
130
2
HOH
HOH
231
A
HOH
132
2
HOH
HOH
232
A
HOH
133
2
HOH
HOH
233
A
HOH
134
2
HOH
HOH
234
A
HOH
135
2
HOH
HOH
235
A
HOH
136
2
HOH
HOH
236
A
HOH
137
2
HOH
HOH
237
A
HOH
139
2
HOH
HOH
238
A
HOH
144
2
HOH
HOH
239
A
HOH
145
2
HOH
HOH
240
A
HOH
151
2
HOH
HOH
241
A
HOH
152
2
HOH
HOH
242
A
HOH
154
2
HOH
HOH
243
A
HOH
155
2
HOH
HOH
244
A
HOH
158
2
HOH
HOH
245
A
HOH
163
2
HOH
HOH
246
A
HOH
164
2
HOH
HOH
247
A
HOH
165
2
HOH
HOH
248
A
HOH
166
2
HOH
HOH
249
A
HOH
168
2
HOH
HOH
250
A
HOH
169
2
HOH
HOH
251
A
HOH
170
2
HOH
HOH
252
A
HOH
172
2
HOH
HOH
253
A
HOH
178
2
HOH
HOH
254
A
HOH
179
2
HOH
HOH
255
A
HOH
182
2
HOH
HOH
256
A
HOH
183
2
HOH
HOH
257
A
HOH
185
2
HOH
HOH
258
A
HOH
187
2
HOH
HOH
259
A
HOH
189
2
HOH
HOH
260
A
HOH
190
2
HOH
HOH
261
A
HOH
191
2
HOH
HOH
262
A
HOH
194
2
HOH
HOH
263
A
HOH
198
2
HOH
HOH
264
A
HOH
200
2
HOH
HOH
265
A
HOH
204
2
HOH
HOH
266
A
HOH
205
2
HOH
HOH
267
A
HOH
206
2
HOH
HOH
268
A
HOH
209
2
HOH
HOH
269
A
HOH
210
2
HOH
HOH
270
A
HOH
211
2
HOH
HOH
271
A
HOH
212
2
HOH
HOH
272
A
HOH
214
2
HOH
HOH
273
A
HOH
215
2
HOH
HOH
274
A
HOH
216
2
HOH
HOH
275
A
HOH
219
2
HOH
HOH
276
A
HOH
222
2
HOH
HOH
277
A
HOH
224
2
HOH
HOH
278
A
HOH
225
2
HOH
HOH
279
A
HOH
226
2
HOH
HOH
280
A
HOH
228
2
HOH
HOH
281
A
HOH
229
2
HOH
HOH
282
A
HOH
233
2
HOH
HOH
283
A
HOH
234
2
HOH
HOH
284
A
HOH
238
2
HOH
HOH
285
A
HOH
240
2
HOH
HOH
286
A
HOH
241
2
HOH
HOH
287
A
HOH
244
2
HOH
HOH
288
A
HOH
245
2
HOH
HOH
289
A
HOH
246
2
HOH
HOH
290
A
HOH
247
2
HOH
HOH
291
A
HOH
248
2
HOH
HOH
292
A
HOH
249
2
HOH
HOH
293
A
HOH
250
2
HOH
HOH
294
A
HOH
251
2
HOH
HOH
295
A
HOH
253
2
HOH
HOH
296
A
HOH
1
2
HOH
HOH
164
B
HOH
6
2
HOH
HOH
165
B
HOH
9
2
HOH
HOH
166
B
HOH
11
2
HOH
HOH
167
B
HOH
12
2
HOH
HOH
168
B
HOH
13
2
HOH
HOH
169
B
HOH
14
2
HOH
HOH
170
B
HOH
20
2
HOH
HOH
171
B
HOH
21
2
HOH
HOH
172
B
HOH
24
2
HOH
HOH
173
B
HOH
28
2
HOH
HOH
174
B
HOH
30
2
HOH
HOH
175
B
HOH
33
2
HOH
HOH
176
B
HOH
35
2
HOH
HOH
177
B
HOH
40
2
HOH
HOH
178
B
HOH
41
2
HOH
HOH
179
B
HOH
44
2
HOH
HOH
180
B
HOH
45
2
HOH
HOH
181
B
HOH
47
2
HOH
HOH
182
B
HOH
48
2
HOH
HOH
183
B
HOH
49
2
HOH
HOH
184
B
HOH
50
2
HOH
HOH
185
B
HOH
52
2
HOH
HOH
186
B
HOH
53
2
HOH
HOH
187
B
HOH
55
2
HOH
HOH
188
B
HOH
56
2
HOH
HOH
189
B
HOH
57
2
HOH
HOH
190
B
HOH
60
2
HOH
HOH
191
B
HOH
63
2
HOH
HOH
192
B
HOH
64
2
HOH
HOH
193
B
HOH
66
2
HOH
HOH
194
B
HOH
68
2
HOH
HOH
195
B
HOH
69
2
HOH
HOH
196
B
HOH
70
2
HOH
HOH
197
B
HOH
71
2
HOH
HOH
198
B
HOH
72
2
HOH
HOH
199
B
HOH
75
2
HOH
HOH
200
B
HOH
76
2
HOH
HOH
201
B
HOH
79
2
HOH
HOH
202
B
HOH
80
2
HOH
HOH
203
B
HOH
83
2
HOH
HOH
204
B
HOH
85
2
HOH
HOH
205
B
HOH
88
2
HOH
HOH
206
B
HOH
91
2
HOH
HOH
207
B
HOH
92
2
HOH
HOH
208
B
HOH
93
2
HOH
HOH
209
B
HOH
94
2
HOH
HOH
210
B
HOH
96
2
HOH
HOH
211
B
HOH
97
2
HOH
HOH
212
B
HOH
100
2
HOH
HOH
213
B
HOH
101
2
HOH
HOH
214
B
HOH
108
2
HOH
HOH
215
B
HOH
109
2
HOH
HOH
216
B
HOH
111
2
HOH
HOH
217
B
HOH
112
2
HOH
HOH
218
B
HOH
114
2
HOH
HOH
219
B
HOH
118
2
HOH
HOH
220
B
HOH
123
2
HOH
HOH
221
B
HOH
126
2
HOH
HOH
222
B
HOH
127
2
HOH
HOH
223
B
HOH
128
2
HOH
HOH
224
B
HOH
129
2
HOH
HOH
225
B
HOH
131
2
HOH
HOH
226
B
HOH
138
2
HOH
HOH
227
B
HOH
140
2
HOH
HOH
228
B
HOH
141
2
HOH
HOH
229
B
HOH
142
2
HOH
HOH
230
B
HOH
143
2
HOH
HOH
231
B
HOH
146
2
HOH
HOH
232
B
HOH
147
2
HOH
HOH
233
B
HOH
148
2
HOH
HOH
234
B
HOH
149
2
HOH
HOH
235
B
HOH
150
2
HOH
HOH
236
B
HOH
153
2
HOH
HOH
237
B
HOH
156
2
HOH
HOH
238
B
HOH
157
2
HOH
HOH
239
B
HOH
159
2
HOH
HOH
240
B
HOH
160
2
HOH
HOH
241
B
HOH
161
2
HOH
HOH
242
B
HOH
162
2
HOH
HOH
243
B
HOH
167
2
HOH
HOH
244
B
HOH
171
2
HOH
HOH
245
B
HOH
173
2
HOH
HOH
246
B
HOH
174
2
HOH
HOH
247
B
HOH
175
2
HOH
HOH
248
B
HOH
176
2
HOH
HOH
249
B
HOH
177
2
HOH
HOH
250
B
HOH
180
2
HOH
HOH
251
B
HOH
181
2
HOH
HOH
252
B
HOH
184
2
HOH
HOH
253
B
HOH
186
2
HOH
HOH
254
B
HOH
188
2
HOH
HOH
255
B
HOH
192
2
HOH
HOH
256
B
HOH
193
2
HOH
HOH
257
B
HOH
195
2
HOH
HOH
258
B
HOH
196
2
HOH
HOH
259
B
HOH
197
2
HOH
HOH
260
B
HOH
199
2
HOH
HOH
261
B
HOH
201
2
HOH
HOH
262
B
HOH
202
2
HOH
HOH
263
B
HOH
203
2
HOH
HOH
264
B
HOH
207
2
HOH
HOH
265
B
HOH
208
2
HOH
HOH
266
B
HOH
213
2
HOH
HOH
267
B
HOH
217
2
HOH
HOH
268
B
HOH
218
2
HOH
HOH
269
B
HOH
220
2
HOH
HOH
270
B
HOH
221
2
HOH
HOH
271
B
HOH
223
2
HOH
HOH
272
B
HOH
227
2
HOH
HOH
273
B
HOH
230
2
HOH
HOH
274
B
HOH
231
2
HOH
HOH
275
B
HOH
232
2
HOH
HOH
276
B
HOH
235
2
HOH
HOH
277
B
HOH
236
2
HOH
HOH
278
B
HOH
237
2
HOH
HOH
279
B
HOH
239
2
HOH
HOH
280
B
HOH
242
2
HOH
HOH
281
B
HOH
243
2
HOH
HOH
282
B
HOH
252
2
HOH
HOH
283
B
MSE
1
n
1
MSE
1
A
VAL
2
n
2
VAL
2
A
THR
3
n
3
THR
3
A
PHE
4
n
4
PHE
4
A
LEU
5
n
5
LEU
5
A
GLY
6
n
6
GLY
6
A
ASN
7
n
7
ASN
7
A
PRO
8
n
8
PRO
8
A
VAL
9
n
9
VAL
9
A
SER
10
n
10
SER
10
A
PHE
11
n
11
PHE
11
A
THR
12
n
12
THR
12
A
GLY
13
n
13
GLY
13
A
LYS
14
n
14
LYS
14
A
GLN
15
n
15
GLN
15
A
LEU
16
n
16
LEU
16
A
GLN
17
n
17
GLN
17
A
VAL
18
n
18
VAL
18
A
GLY
19
n
19
GLY
19
A
ASP
20
n
20
ASP
20
A
LYS
21
n
21
LYS
21
A
ALA
22
n
22
ALA
22
A
LEU
23
n
23
LEU
23
A
ASP
24
n
24
ASP
24
A
PHE
25
n
25
PHE
25
A
SER
26
n
26
SER
26
A
LEU
27
n
27
LEU
27
A
THR
28
n
28
THR
28
A
THR
29
n
29
THR
29
A
THR
30
n
30
THR
30
A
ASP
31
n
31
ASP
31
A
LEU
32
n
32
LEU
32
A
SER
33
n
33
SER
33
A
LYS
34
n
34
LYS
34
A
LYS
35
n
35
LYS
35
A
SER
36
n
36
SER
36
A
LEU
37
n
37
LEU
37
A
ALA
38
n
38
ALA
38
A
ASP
39
n
39
ASP
39
A
PHE
40
n
40
PHE
40
A
ASP
41
n
41
ASP
41
A
GLY
42
n
42
GLY
42
A
LYS
43
n
43
LYS
43
A
LYS
44
n
44
LYS
44
A
LYS
45
n
45
LYS
45
A
VAL
46
n
46
VAL
46
A
LEU
47
n
47
LEU
47
A
SER
48
n
48
SER
48
A
VAL
49
n
49
VAL
49
A
VAL
50
n
50
VAL
50
A
PRO
51
n
51
PRO
51
A
SER
52
n
52
SER
52
A
ILE
53
n
53
ILE
53
A
ASP
54
n
54
ASP
54
A
THR
55
n
55
THR
55
A
GLY
56
n
56
GLY
56
A
ILE
57
n
57
ILE
57
A
CYS
58
n
58
CYS
58
A
SER
59
n
59
SER
59
A
THR
60
n
60
THR
60
A
GLN
61
n
61
GLN
61
A
THR
62
n
62
THR
62
A
ARG
63
n
63
ARG
63
A
ARG
64
n
64
ARG
64
A
PHE
65
n
65
PHE
65
A
ASN
66
n
66
ASN
66
A
GLU
67
n
67
GLU
67
A
GLU
68
n
68
GLU
68
A
LEU
69
n
69
LEU
69
A
ALA
70
n
70
ALA
70
A
GLY
71
n
71
GLY
71
A
LEU
72
n
72
LEU
72
A
ASP
73
n
73
ASP
73
A
ASN
74
n
74
ASN
74
A
THR
75
n
75
THR
75
A
VAL
76
n
76
VAL
76
A
VAL
77
n
77
VAL
77
A
LEU
78
n
78
LEU
78
A
THR
79
n
79
THR
79
A
VAL
80
n
80
VAL
80
A
SER
81
n
81
SER
81
A
MSE
82
n
82
MSE
82
A
ASP
83
n
83
ASP
83
A
LEU
84
n
84
LEU
84
A
PRO
85
n
85
PRO
85
A
PHE
86
n
86
PHE
86
A
ALA
87
n
87
ALA
87
A
GLN
88
n
88
GLN
88
A
LYS
89
n
89
LYS
89
A
ARG
90
n
90
ARG
90
A
TRP
91
n
91
TRP
91
A
CYS
92
n
92
CYS
92
A
GLY
93
n
93
GLY
93
A
ALA
94
n
94
ALA
94
A
GLU
95
n
95
GLU
95
A
GLY
96
n
96
GLY
96
A
LEU
97
n
97
LEU
97
A
ASP
98
n
98
ASP
98
A
ASN
99
n
99
ASN
99
A
ALA
100
n
100
ALA
100
A
ILE
101
n
101
ILE
101
A
MSE
102
n
102
MSE
102
A
LEU
103
n
103
LEU
103
A
SER
104
n
104
SER
104
A
ASP
105
n
105
ASP
105
A
TYR
106
n
106
TYR
106
A
PHE
107
n
107
PHE
107
A
ASP
108
n
108
ASP
108
A
HIS
109
n
109
HIS
109
A
SER
110
n
110
SER
110
A
PHE
111
n
111
PHE
111
A
GLY
112
n
112
GLY
112
A
ARG
113
n
113
ARG
113
A
ASP
114
n
114
ASP
114
A
TYR
115
n
115
TYR
115
A
ALA
116
n
116
ALA
116
A
LEU
117
n
117
LEU
117
A
LEU
118
n
118
LEU
118
A
ILE
119
n
119
ILE
119
A
ASN
120
n
120
ASN
120
A
GLU
121
n
121
GLU
121
A
TRP
122
n
122
TRP
122
A
HIS
123
n
123
HIS
123
A
LEU
124
n
124
LEU
124
A
LEU
125
n
125
LEU
125
A
ALA
126
n
126
ALA
126
A
ARG
127
n
127
ARG
127
A
ALA
128
n
128
ALA
128
A
VAL
129
n
129
VAL
129
A
PHE
130
n
130
PHE
130
A
VAL
131
n
131
VAL
131
A
LEU
132
n
132
LEU
132
A
ASP
133
n
133
ASP
133
A
THR
134
n
134
THR
134
A
ASP
135
n
135
ASP
135
A
ASN
136
n
136
ASN
136
A
THR
137
n
137
THR
137
A
ILE
138
n
138
ILE
138
A
ARG
139
n
139
ARG
139
A
TYR
140
n
140
TYR
140
A
VAL
141
n
141
VAL
141
A
GLU
142
n
142
GLU
142
A
TYR
143
n
143
TYR
143
A
VAL
144
n
144
VAL
144
A
ASP
145
n
145
ASP
145
A
ASN
146
n
146
ASN
146
A
ILE
147
n
147
ILE
147
A
ASN
148
n
148
ASN
148
A
SER
149
n
149
SER
149
A
GLU
150
n
150
GLU
150
A
PRO
151
n
151
PRO
151
A
ASN
152
n
152
ASN
152
A
PHE
153
n
153
PHE
153
A
GLU
154
n
154
GLU
154
A
ALA
155
n
155
ALA
155
A
ALA
156
n
156
ALA
156
A
ILE
157
n
157
ILE
157
A
ALA
158
n
158
ALA
158
A
ALA
159
n
159
ALA
159
A
ALA
160
n
160
ALA
160
A
LYS
161
n
161
LYS
161
A
ALA
162
n
162
ALA
162
A
LEU
163
n
163
LEU
163
A
MSE
1
n
1
MSE
1
B
VAL
2
n
2
VAL
2
B
THR
3
n
3
THR
3
B
PHE
4
n
4
PHE
4
B
LEU
5
n
5
LEU
5
B
GLY
6
n
6
GLY
6
B
ASN
7
n
7
ASN
7
B
PRO
8
n
8
PRO
8
B
VAL
9
n
9
VAL
9
B
SER
10
n
10
SER
10
B
PHE
11
n
11
PHE
11
B
THR
12
n
12
THR
12
B
GLY
13
n
13
GLY
13
B
LYS
14
n
14
LYS
14
B
GLN
15
n
15
GLN
15
B
LEU
16
n
16
LEU
16
B
GLN
17
n
17
GLN
17
B
VAL
18
n
18
VAL
18
B
GLY
19
n
19
GLY
19
B
ASP
20
n
20
ASP
20
B
LYS
21
n
21
LYS
21
B
ALA
22
n
22
ALA
22
B
LEU
23
n
23
LEU
23
B
ASP
24
n
24
ASP
24
B
PHE
25
n
25
PHE
25
B
SER
26
n
26
SER
26
B
LEU
27
n
27
LEU
27
B
THR
28
n
28
THR
28
B
THR
29
n
29
THR
29
B
THR
30
n
30
THR
30
B
ASP
31
n
31
ASP
31
B
LEU
32
n
32
LEU
32
B
SER
33
n
33
SER
33
B
LYS
34
n
34
LYS
34
B
LYS
35
n
35
LYS
35
B
SER
36
n
36
SER
36
B
LEU
37
n
37
LEU
37
B
ALA
38
n
38
ALA
38
B
ASP
39
n
39
ASP
39
B
PHE
40
n
40
PHE
40
B
ASP
41
n
41
ASP
41
B
GLY
42
n
42
GLY
42
B
LYS
43
n
43
LYS
43
B
LYS
44
n
44
LYS
44
B
LYS
45
n
45
LYS
45
B
VAL
46
n
46
VAL
46
B
LEU
47
n
47
LEU
47
B
SER
48
n
48
SER
48
B
VAL
49
n
49
VAL
49
B
VAL
50
n
50
VAL
50
B
PRO
51
n
51
PRO
51
B
SER
52
n
52
SER
52
B
ILE
53
n
53
ILE
53
B
ASP
54
n
54
ASP
54
B
THR
55
n
55
THR
55
B
GLY
56
n
56
GLY
56
B
ILE
57
n
57
ILE
57
B
CYS
58
n
58
CYS
58
B
SER
59
n
59
SER
59
B
THR
60
n
60
THR
60
B
GLN
61
n
61
GLN
61
B
THR
62
n
62
THR
62
B
ARG
63
n
63
ARG
63
B
ARG
64
n
64
ARG
64
B
PHE
65
n
65
PHE
65
B
ASN
66
n
66
ASN
66
B
GLU
67
n
67
GLU
67
B
GLU
68
n
68
GLU
68
B
LEU
69
n
69
LEU
69
B
ALA
70
n
70
ALA
70
B
GLY
71
n
71
GLY
71
B
LEU
72
n
72
LEU
72
B
ASP
73
n
73
ASP
73
B
ASN
74
n
74
ASN
74
B
THR
75
n
75
THR
75
B
VAL
76
n
76
VAL
76
B
VAL
77
n
77
VAL
77
B
LEU
78
n
78
LEU
78
B
THR
79
n
79
THR
79
B
VAL
80
n
80
VAL
80
B
SER
81
n
81
SER
81
B
MSE
82
n
82
MSE
82
B
ASP
83
n
83
ASP
83
B
LEU
84
n
84
LEU
84
B
PRO
85
n
85
PRO
85
B
PHE
86
n
86
PHE
86
B
ALA
87
n
87
ALA
87
B
GLN
88
n
88
GLN
88
B
LYS
89
n
89
LYS
89
B
ARG
90
n
90
ARG
90
B
TRP
91
n
91
TRP
91
B
CYS
92
n
92
CYS
92
B
GLY
93
n
93
GLY
93
B
ALA
94
n
94
ALA
94
B
GLU
95
n
95
GLU
95
B
GLY
96
n
96
GLY
96
B
LEU
97
n
97
LEU
97
B
ASP
98
n
98
ASP
98
B
ASN
99
n
99
ASN
99
B
ALA
100
n
100
ALA
100
B
ILE
101
n
101
ILE
101
B
MSE
102
n
102
MSE
102
B
LEU
103
n
103
LEU
103
B
SER
104
n
104
SER
104
B
ASP
105
n
105
ASP
105
B
TYR
106
n
106
TYR
106
B
PHE
107
n
107
PHE
107
B
ASP
108
n
108
ASP
108
B
HIS
109
n
109
HIS
109
B
SER
110
n
110
SER
110
B
PHE
111
n
111
PHE
111
B
GLY
112
n
112
GLY
112
B
ARG
113
n
113
ARG
113
B
ASP
114
n
114
ASP
114
B
TYR
115
n
115
TYR
115
B
ALA
116
n
116
ALA
116
B
LEU
117
n
117
LEU
117
B
LEU
118
n
118
LEU
118
B
ILE
119
n
119
ILE
119
B
ASN
120
n
120
ASN
120
B
GLU
121
n
121
GLU
121
B
TRP
122
n
122
TRP
122
B
HIS
123
n
123
HIS
123
B
LEU
124
n
124
LEU
124
B
LEU
125
n
125
LEU
125
B
ALA
126
n
126
ALA
126
B
ARG
127
n
127
ARG
127
B
ALA
128
n
128
ALA
128
B
VAL
129
n
129
VAL
129
B
PHE
130
n
130
PHE
130
B
VAL
131
n
131
VAL
131
B
LEU
132
n
132
LEU
132
B
ASP
133
n
133
ASP
133
B
THR
134
n
134
THR
134
B
ASP
135
n
135
ASP
135
B
ASN
136
n
136
ASN
136
B
THR
137
n
137
THR
137
B
ILE
138
n
138
ILE
138
B
ARG
139
n
139
ARG
139
B
TYR
140
n
140
TYR
140
B
VAL
141
n
141
VAL
141
B
GLU
142
n
142
GLU
142
B
TYR
143
n
143
TYR
143
B
VAL
144
n
144
VAL
144
B
ASP
145
n
145
ASP
145
B
ASN
146
n
146
ASN
146
B
ILE
147
n
147
ILE
147
B
ASN
148
n
148
ASN
148
B
SER
149
n
149
SER
149
B
GLU
150
n
150
GLU
150
B
PRO
151
n
151
PRO
151
B
ASN
152
n
152
ASN
152
B
PHE
153
n
153
PHE
153
B
GLU
154
n
154
GLU
154
B
ALA
155
n
155
ALA
155
B
ALA
156
n
156
ALA
156
B
ILE
157
n
157
ILE
157
B
ALA
158
n
158
ALA
158
B
ALA
159
n
159
ALA
159
B
ALA
160
n
160
ALA
160
B
LYS
161
n
161
LYS
161
B
ALA
162
n
162
ALA
162
B
LEU
163
n
163
LEU
163
B
author_and_software_defined_assembly
PISA
2
dimeric
1770
-15
13440
A
MSE
1
SELENOMETHIONINE
A
MSE
1
MET
A
MSE
82
SELENOMETHIONINE
A
MSE
82
MET
A
MSE
102
SELENOMETHIONINE
A
MSE
102
MET
B
MSE
1
SELENOMETHIONINE
B
MSE
1
MET
B
MSE
82
SELENOMETHIONINE
B
MSE
82
MET
B
MSE
102
SELENOMETHIONINE
B
MSE
102
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
27
A
N
LEU
27
A
O
LYS
35
A
O
LYS
35
A
O
LEU
103
A
O
LEU
103
A
N
THR
79
A
N
THR
79
A
O
LEU
78
A
O
LEU
78
A
N
SER
48
A
N
SER
48
A
N
LEU
47
A
N
LEU
47
A
O
PHE
130
A
O
PHE
130
A
N
VAL
131
A
N
VAL
131
A
O
ARG
139
A
O
ARG
139
B
N
VAL
2
B
N
VAL
2
B
O
VAL
9
B
O
VAL
9
B
O
LYS
35
B
O
LYS
35
B
N
LEU
27
B
N
LEU
27
B
N
THR
28
B
N
THR
28
B
O
SER
104
B
O
SER
104
B
O
LEU
103
B
O
LEU
103
B
N
THR
79
B
N
THR
79
B
O
VAL
76
B
O
VAL
76
B
N
VAL
46
B
N
VAL
46
B
N
LEU
47
B
N
LEU
47
B
O
PHE
130
B
O
PHE
130
B
N
VAL
131
B
N
VAL
131
B
O
ARG
139
B
O
ARG
139
1
A
HOH
248
C
HOH
1
B
B
O
O
HOH
HOH
165
266
2.14
1
A
A
O
O
HOH
HOH
172
172
1.49
1_555
2_554
1
A
LEU
32
70.37
-0.51
1
A
SER
52
-173.51
127.12
1
A
ILE
53
-69.77
3.51
1
A
LEU
97
-118.15
51.13
1
B
SER
52
-175.42
123.13
PROTEIN_REP.PARAM
PROTEIN.TOP
DNA-RNA_REP.PARAM
DNA-RNA.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
20.1
-1.63
0.00
0.41
-1.48
0.00
3.11
BULK SOLVENT MODEL USED
0.249
0.009
0.2
0.2
2.30
19.80
745
16610
14871
5.0
90.0
RANDOM
1
RESTRAINED
THROUGHOUT
0.0
SAD
Engh & Huber
FLAT MODEL
47.4012
0.393341
0.30
0.34
2.30
19.80
253
2791
0
0
2538
0.007
1.2
23.7
0.80
1.17
1.50
1.84
2.00
2.05
2.00
2.99
2.50
0.249
6
19.7
2.30
500
1PSQ
16610
16610
-3
1
100
2.30
2.38
99.8
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
model building
RESOLVE
refinement
CNS
1.1
phasing
RESOLVE
probable thiol peroxidase (E.C.1.11.1.-)
Structure of a probable thiol peroxidase from Streptococcus pneumoniae
1
N
N
1
N
N
2
N
N
2
N
N
A
ALA
38
A
ALA
38
HELX_P
A
ASP
41
A
ASP
41
5
1
4
A
THR
55
A
THR
55
HELX_P
A
LEU
69
A
LEU
69
1
2
15
A
LEU
84
A
LEU
84
HELX_P
A
GLY
96
A
GLY
96
1
3
13
A
HIS
109
A
HIS
109
HELX_P
A
TYR
115
A
TYR
115
1
4
7
A
ASN
152
A
ASN
152
HELX_P
A
LEU
163
A
LEU
163
1
5
12
B
SER
36
B
SER
36
HELX_P
B
ASP
41
B
ASP
41
5
6
6
B
THR
55
B
THR
55
HELX_P
B
LEU
69
B
LEU
69
1
7
15
B
LEU
84
B
LEU
84
HELX_P
B
GLY
96
B
GLY
96
1
8
13
B
HIS
109
B
HIS
109
HELX_P
B
TYR
115
B
TYR
115
1
9
7
B
ASN
152
B
ASN
152
HELX_P
B
LEU
163
B
LEU
163
1
10
12
covale
1.321
both
A
MSE
1
A
C
MSE
1
1_555
A
VAL
2
A
N
VAL
2
1_555
covale
1.325
both
A
SER
81
A
C
SER
81
1_555
A
MSE
82
A
N
MSE
82
1_555
covale
1.332
both
A
MSE
82
A
C
MSE
82
1_555
A
ASP
83
A
N
ASP
83
1_555
covale
1.321
both
A
ILE
101
A
C
ILE
101
1_555
A
MSE
102
A
N
MSE
102
1_555
covale
1.328
both
A
MSE
102
A
C
MSE
102
1_555
A
LEU
103
A
N
LEU
103
1_555
covale
1.333
both
B
MSE
1
B
C
MSE
1
1_555
B
VAL
2
B
N
VAL
2
1_555
covale
1.328
both
B
SER
81
B
C
SER
81
1_555
B
MSE
82
B
N
MSE
82
1_555
covale
1.332
both
B
MSE
82
B
C
MSE
82
1_555
B
ASP
83
B
N
ASP
83
1_555
covale
1.333
both
B
ILE
101
B
C
ILE
101
1_555
B
MSE
102
B
N
MSE
102
1_555
covale
1.327
both
B
MSE
102
B
C
MSE
102
1_555
B
LEU
103
B
N
LEU
103
1_555
OXIDOREDUCTASE
STRUCTURAL GENOMICS, THIOL, PEROXIDASE, NYSGXRC, T817, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, oxidoreductase
TPX1_STRPN
UNP
1
1
P0A4M5
MVTFLGNPVSFTGKQLQVGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLDNTVVLTV
SMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAA
KAL
1
163
1PSQ
1
163
P0A4M5
A
1
1
163
1
163
1PSQ
1
163
P0A4M5
B
1
1
163
1
MET
modified residue
MSE
1
1PSQ
A
P0A4M5
UNP
1
1
1
MET
modified residue
MSE
82
1PSQ
A
P0A4M5
UNP
82
82
1
MET
modified residue
MSE
102
1PSQ
A
P0A4M5
UNP
102
102
2
MET
modified residue
MSE
1
1PSQ
B
P0A4M5
UNP
1
1
2
MET
modified residue
MSE
82
1PSQ
B
P0A4M5
UNP
82
82
2
MET
modified residue
MSE
102
1PSQ
B
P0A4M5
UNP
102
102
2
5
2
7
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
A
SER
26
A
SER
26
A
THR
28
A
THR
28
A
LYS
34
A
LYS
34
A
SER
36
A
SER
36
A
ILE
101
A
ILE
101
A
SER
104
A
SER
104
A
THR
75
A
THR
75
A
SER
81
A
SER
81
A
LYS
44
A
LYS
44
A
VAL
49
A
VAL
49
A
ALA
128
A
ALA
128
A
LEU
132
A
LEU
132
A
ILE
138
A
ILE
138
A
TYR
143
A
TYR
143
B
VAL
2
B
VAL
2
B
PHE
4
B
PHE
4
B
ASN
7
B
ASN
7
B
VAL
9
B
VAL
9
B
LYS
34
B
LYS
34
B
LYS
35
B
LYS
35
B
LEU
27
B
LEU
27
B
THR
29
B
THR
29
B
ILE
101
B
ILE
101
B
SER
104
B
SER
104
B
THR
75
B
THR
75
B
SER
81
B
SER
81
B
LYS
44
B
LYS
44
B
VAL
49
B
VAL
49
B
ALA
128
B
ALA
128
B
LEU
132
B
LEU
132
B
ILE
138
B
ILE
138
B
TYR
143
B
TYR
143
5
monoclinic
C 1 2 1