0.017422
0.000000
0.000000
0.000000
0.017422
0.000000
0.000000
0.000000
0.003982
0.00000
0.00000
0.00000
Singh, A.
Venning, J.D.
Quirk, P.G.
van Boxel, G.I.
Rodrigues, D.J.
White, S.A.
Jackson, J.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
57.400
57.400
251.130
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C21 H28 N7 O16 P3 S
759.471
7-THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
TATP
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
S
N
319
N
O
N
320
N
O
N
321
N
O
N
322
N
O
N
323
R
P
N
324
N
O
N
325
N
O
N
326
N
O
N
327
N
C
N
328
R
C
N
329
N
O
N
330
R
C
N
331
N
O
N
332
R
C
N
333
N
O
N
334
R
C
Y
335
N
N
Y
336
N
C
Y
337
N
N
Y
338
N
C
Y
339
N
C
N
340
N
N
Y
341
N
N
Y
342
N
C
Y
343
N
N
Y
344
N
C
N
345
N
O
N
346
N
P
N
347
N
O
N
348
N
O
N
349
N
O
N
350
N
C
N
351
R
C
N
352
N
O
N
353
S
C
N
354
N
O
N
355
R
C
N
356
N
O
N
357
R
C
Y
358
N
N
Y
359
N
C
Y
360
N
C
N
361
N
C
N
362
N
S
N
363
N
N
Y
364
N
C
Y
365
N
C
Y
366
N
C
N
367
N
P
N
368
N
O
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
R
C
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
N
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
N
454
N
O
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
N
N
468
S
C
N
469
N
C
N
470
N
O
N
471
N
C
N
472
N
C
N
473
N
C
N
474
N
O
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
sing
Y
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
Y
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
N
340
N
sing
Y
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
sing
Y
368
N
doub
Y
369
N
doub
N
370
N
sing
N
371
N
sing
Y
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
Y
414
N
doub
Y
415
N
sing
Y
416
N
sing
N
417
N
sing
Y
418
N
doub
Y
419
N
sing
Y
420
N
sing
N
421
N
sing
Y
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
doub
N
426
N
sing
Y
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
doub
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
Y
442
N
doub
Y
443
N
sing
Y
444
N
sing
N
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
33208
33216
10.1074/jbc.M303061200
12791694
Interactions between transhydrogenase and thio-nicotinamide analogues of NAD(H) and NADP(H) underline the importance of nucleotide conformational changes in coupling to proton translocation
2003
10.2210/pdb1pt9/pdb
pdb_00001pt9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
SINGLE WAVELENGTH
M
x-ray
1
1.0
ID14-1
ESRF
SYNCHROTRON
ESRF BEAMLINE ID14-1
22281.652
NAD(P) transhydrogenase, mitochondrial
1.6.1.2
residues 880-1086
2
nat
polymer
96.063
SULFATE ION
2
syn
non-polymer
759.471
7-THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2
syn
non-polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
171
nat
water
Pyridine nucleotide transhydrogenase, Nicotinamide nucleotide transhydrogenase
no
no
MNRSLANVILGGYGTTSTAGGKPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVR
FGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVI
VMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK
MNRSLANVILGGYGTTSTAGGKPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVR
FGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVI
VMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Heart
Homo sapiens
1
2.32
46.98
VAPOR DIFFUSION, SITTING DROP
7.00
ammonium sulfate, peg 400, glycerol, pH 7.00, VAPOR DIFFUSION, SITTING DROP, temperature 100K
exptl_crystal_grow
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Non-polymer description
Version format compliance
Experimental preparation
Data collection
Database references
Derived calculations
Refinement description
1
0
2003-10-07
1
1
2008-04-29
1
2
2011-07-13
1
3
2018-01-31
1
4
2023-08-16
_exptl_crystal_grow.temp
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal structure analysis of the DI and DIII complex of transhydrogenase with a thio-nicotinamide nucleotide analogue
RCSB
Y
RCSB
2003-06-23
REL
REL
SO4
SULFATE ION
TAP
7-THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
GOL
GLYCEROL
HOH
water
1DJL
PDB ENTRY 1DJL
PDB
experimental model
SO4
206
2
SO4
SO4
208
A
NAP
300
3
TAP
TAP
300
A
GOL
220
4
GOL
GOL
220
A
SO4
210
2
SO4
SO4
210
B
NAP
300
3
TAP
TAP
301
B
GOL
230
4
GOL
GOL
230
B
WAT
2
5
HOH
HOH
301
A
WAT
8
5
HOH
HOH
302
A
WAT
9
5
HOH
HOH
303
A
WAT
10
5
HOH
HOH
304
A
WAT
15
5
HOH
HOH
305
A
WAT
16
5
HOH
HOH
306
A
WAT
17
5
HOH
HOH
307
A
WAT
18
5
HOH
HOH
308
A
WAT
21
5
HOH
HOH
309
A
WAT
23
5
HOH
HOH
310
A
WAT
24
5
HOH
HOH
311
A
WAT
25
5
HOH
HOH
312
A
WAT
28
5
HOH
HOH
313
A
WAT
29
5
HOH
HOH
314
A
WAT
32
5
HOH
HOH
315
A
WAT
34
5
HOH
HOH
316
A
WAT
35
5
HOH
HOH
317
A
WAT
36
5
HOH
HOH
318
A
WAT
37
5
HOH
HOH
319
A
WAT
38
5
HOH
HOH
320
A
WAT
39
5
HOH
HOH
321
A
WAT
43
5
HOH
HOH
322
A
WAT
44
5
HOH
HOH
323
A
WAT
45
5
HOH
HOH
324
A
WAT
47
5
HOH
HOH
325
A
WAT
48
5
HOH
HOH
326
A
WAT
52
5
HOH
HOH
327
A
WAT
53
5
HOH
HOH
328
A
WAT
55
5
HOH
HOH
329
A
WAT
60
5
HOH
HOH
330
A
WAT
62
5
HOH
HOH
331
A
WAT
63
5
HOH
HOH
332
A
WAT
65
5
HOH
HOH
333
A
WAT
66
5
HOH
HOH
334
A
WAT
68
5
HOH
HOH
335
A
WAT
74
5
HOH
HOH
336
A
WAT
76
5
HOH
HOH
337
A
WAT
77
5
HOH
HOH
338
A
WAT
82
5
HOH
HOH
339
A
WAT
87
5
HOH
HOH
340
A
WAT
90
5
HOH
HOH
341
A
WAT
92
5
HOH
HOH
342
A
WAT
94
5
HOH
HOH
343
A
WAT
96
5
HOH
HOH
344
A
WAT
97
5
HOH
HOH
345
A
WAT
102
5
HOH
HOH
346
A
WAT
103
5
HOH
HOH
347
A
WAT
104
5
HOH
HOH
348
A
WAT
106
5
HOH
HOH
349
A
WAT
108
5
HOH
HOH
350
A
WAT
109
5
HOH
HOH
351
A
WAT
110
5
HOH
HOH
352
A
WAT
111
5
HOH
HOH
353
A
WAT
114
5
HOH
HOH
354
A
WAT
115
5
HOH
HOH
355
A
WAT
116
5
HOH
HOH
356
A
WAT
119
5
HOH
HOH
357
A
WAT
122
5
HOH
HOH
358
A
WAT
123
5
HOH
HOH
359
A
WAT
124
5
HOH
HOH
360
A
WAT
126
5
HOH
HOH
361
A
WAT
129
5
HOH
HOH
362
A
WAT
130
5
HOH
HOH
363
A
WAT
131
5
HOH
HOH
364
A
WAT
132
5
HOH
HOH
365
A
WAT
133
5
HOH
HOH
366
A
WAT
138
5
HOH
HOH
367
A
WAT
139
5
HOH
HOH
368
A
WAT
142
5
HOH
HOH
369
A
WAT
144
5
HOH
HOH
370
A
WAT
146
5
HOH
HOH
371
A
WAT
148
5
HOH
HOH
372
A
WAT
150
5
HOH
HOH
373
A
WAT
152
5
HOH
HOH
374
A
WAT
153
5
HOH
HOH
375
A
WAT
154
5
HOH
HOH
376
A
WAT
155
5
HOH
HOH
377
A
WAT
157
5
HOH
HOH
378
A
WAT
158
5
HOH
HOH
379
A
WAT
159
5
HOH
HOH
380
A
WAT
163
5
HOH
HOH
381
A
WAT
164
5
HOH
HOH
382
A
WAT
166
5
HOH
HOH
383
A
WAT
167
5
HOH
HOH
384
A
WAT
168
5
HOH
HOH
385
A
WAT
171
5
HOH
HOH
386
A
WAT
173
5
HOH
HOH
387
A
WAT
174
5
HOH
HOH
388
A
WAT
175
5
HOH
HOH
389
A
WAT
1
5
HOH
HOH
302
B
WAT
3
5
HOH
HOH
303
B
WAT
4
5
HOH
HOH
304
B
WAT
5
5
HOH
HOH
305
B
WAT
6
5
HOH
HOH
306
B
WAT
7
5
HOH
HOH
307
B
WAT
11
5
HOH
HOH
308
B
WAT
12
5
HOH
HOH
309
B
WAT
13
5
HOH
HOH
310
B
WAT
14
5
HOH
HOH
311
B
WAT
19
5
HOH
HOH
312
B
WAT
20
5
HOH
HOH
313
B
WAT
22
5
HOH
HOH
314
B
WAT
26
5
HOH
HOH
315
B
WAT
27
5
HOH
HOH
316
B
WAT
30
5
HOH
HOH
317
B
WAT
31
5
HOH
HOH
318
B
WAT
33
5
HOH
HOH
319
B
WAT
40
5
HOH
HOH
320
B
WAT
41
5
HOH
HOH
321
B
WAT
42
5
HOH
HOH
322
B
WAT
49
5
HOH
HOH
323
B
WAT
54
5
HOH
HOH
324
B
WAT
58
5
HOH
HOH
325
B
WAT
61
5
HOH
HOH
326
B
WAT
64
5
HOH
HOH
327
B
WAT
67
5
HOH
HOH
328
B
WAT
69
5
HOH
HOH
329
B
WAT
70
5
HOH
HOH
330
B
WAT
71
5
HOH
HOH
331
B
WAT
72
5
HOH
HOH
332
B
WAT
73
5
HOH
HOH
333
B
WAT
75
5
HOH
HOH
334
B
WAT
78
5
HOH
HOH
335
B
WAT
79
5
HOH
HOH
336
B
WAT
80
5
HOH
HOH
337
B
WAT
81
5
HOH
HOH
338
B
WAT
83
5
HOH
HOH
339
B
WAT
84
5
HOH
HOH
340
B
WAT
85
5
HOH
HOH
341
B
WAT
86
5
HOH
HOH
342
B
WAT
88
5
HOH
HOH
343
B
WAT
89
5
HOH
HOH
344
B
WAT
91
5
HOH
HOH
345
B
WAT
93
5
HOH
HOH
346
B
WAT
95
5
HOH
HOH
347
B
WAT
98
5
HOH
HOH
348
B
WAT
99
5
HOH
HOH
349
B
WAT
100
5
HOH
HOH
350
B
WAT
101
5
HOH
HOH
351
B
WAT
105
5
HOH
HOH
352
B
WAT
107
5
HOH
HOH
353
B
WAT
112
5
HOH
HOH
354
B
WAT
113
5
HOH
HOH
355
B
WAT
117
5
HOH
HOH
356
B
WAT
118
5
HOH
HOH
357
B
WAT
120
5
HOH
HOH
358
B
WAT
121
5
HOH
HOH
359
B
WAT
125
5
HOH
HOH
360
B
WAT
127
5
HOH
HOH
361
B
WAT
128
5
HOH
HOH
362
B
WAT
134
5
HOH
HOH
363
B
WAT
135
5
HOH
HOH
364
B
WAT
136
5
HOH
HOH
365
B
WAT
137
5
HOH
HOH
366
B
WAT
140
5
HOH
HOH
367
B
WAT
141
5
HOH
HOH
368
B
WAT
143
5
HOH
HOH
369
B
WAT
145
5
HOH
HOH
370
B
WAT
147
5
HOH
HOH
371
B
WAT
149
5
HOH
HOH
372
B
WAT
151
5
HOH
HOH
373
B
WAT
156
5
HOH
HOH
374
B
WAT
160
5
HOH
HOH
375
B
WAT
161
5
HOH
HOH
376
B
WAT
162
5
HOH
HOH
377
B
WAT
165
5
HOH
HOH
378
B
WAT
169
5
HOH
HOH
379
B
WAT
170
5
HOH
HOH
380
B
WAT
172
5
HOH
HOH
381
B
WAT
176
5
HOH
HOH
382
B
WAT
177
5
HOH
HOH
383
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
n
14
14
A
n
15
15
A
n
16
16
A
n
17
17
A
n
18
18
A
n
19
19
A
n
20
20
A
n
21
21
A
n
22
22
A
PRO
23
n
23
PRO
23
A
MET
24
n
24
MET
24
A
GLU
25
n
25
GLU
25
A
ILE
26
n
26
ILE
26
A
SER
27
n
27
SER
27
A
GLY
28
n
28
GLY
28
A
THR
29
n
29
THR
29
A
HIS
30
n
30
HIS
30
A
THR
31
n
31
THR
31
A
GLU
32
n
32
GLU
32
A
ILE
33
n
33
ILE
33
A
ASN
34
n
34
ASN
34
A
LEU
35
n
35
LEU
35
A
ASP
36
n
36
ASP
36
A
ASN
37
n
37
ASN
37
A
ALA
38
n
38
ALA
38
A
ILE
39
n
39
ILE
39
A
ASP
40
n
40
ASP
40
A
MET
41
n
41
MET
41
A
ILE
42
n
42
ILE
42
A
ARG
43
n
43
ARG
43
A
GLU
44
n
44
GLU
44
A
ALA
45
n
45
ALA
45
A
ASN
46
n
46
ASN
46
A
SER
47
n
47
SER
47
A
ILE
48
n
48
ILE
48
A
ILE
49
n
49
ILE
49
A
ILE
50
n
50
ILE
50
A
THR
51
n
51
THR
51
A
PRO
52
n
52
PRO
52
A
GLY
53
n
53
GLY
53
A
TYR
54
n
54
TYR
54
A
GLY
55
n
55
GLY
55
A
LEU
56
n
56
LEU
56
A
CYS
57
n
57
CYS
57
A
ALA
58
n
58
ALA
58
A
ALA
59
n
59
ALA
59
A
LYS
60
n
60
LYS
60
A
ALA
61
n
61
ALA
61
A
GLN
62
n
62
GLN
62
A
TYR
63
n
63
TYR
63
A
PRO
64
n
64
PRO
64
A
ILE
65
n
65
ILE
65
A
ALA
66
n
66
ALA
66
A
ASP
67
n
67
ASP
67
A
LEU
68
n
68
LEU
68
A
VAL
69
n
69
VAL
69
A
LYS
70
n
70
LYS
70
A
MET
71
n
71
MET
71
A
LEU
72
n
72
LEU
72
A
THR
73
n
73
THR
73
A
GLU
74
n
74
GLU
74
A
GLN
75
n
75
GLN
75
A
GLY
76
n
76
GLY
76
A
LYS
77
n
77
LYS
77
A
LYS
78
n
78
LYS
78
A
VAL
79
n
79
VAL
79
A
ARG
80
n
80
ARG
80
A
PHE
81
n
81
PHE
81
A
GLY
82
n
82
GLY
82
A
ILE
83
n
83
ILE
83
A
HIS
84
n
84
HIS
84
A
PRO
85
n
85
PRO
85
A
VAL
86
n
86
VAL
86
A
ALA
87
n
87
ALA
87
A
GLY
88
n
88
GLY
88
A
ARG
89
n
89
ARG
89
A
MET
90
n
90
MET
90
A
PRO
91
n
91
PRO
91
A
GLY
92
n
92
GLY
92
A
GLN
93
n
93
GLN
93
A
LEU
94
n
94
LEU
94
A
ASN
95
n
95
ASN
95
A
VAL
96
n
96
VAL
96
A
LEU
97
n
97
LEU
97
A
LEU
98
n
98
LEU
98
A
ALA
99
n
99
ALA
99
A
GLU
100
n
100
GLU
100
A
ALA
101
n
101
ALA
101
A
GLY
102
n
102
GLY
102
A
VAL
103
n
103
VAL
103
A
PRO
104
n
104
PRO
104
A
TYR
105
n
105
TYR
105
A
ASP
106
n
106
ASP
106
A
ILE
107
n
107
ILE
107
A
VAL
108
n
108
VAL
108
A
LEU
109
n
109
LEU
109
A
GLU
110
n
110
GLU
110
A
MET
111
n
111
MET
111
A
ASP
112
n
112
ASP
112
A
GLU
113
n
113
GLU
113
A
ILE
114
n
114
ILE
114
A
ASN
115
n
115
ASN
115
A
HIS
116
n
116
HIS
116
A
ASP
117
n
117
ASP
117
A
PHE
118
n
118
PHE
118
A
PRO
119
n
119
PRO
119
A
ASP
120
n
120
ASP
120
A
THR
121
n
121
THR
121
A
ASP
122
n
122
ASP
122
A
LEU
123
n
123
LEU
123
A
VAL
124
n
124
VAL
124
A
LEU
125
n
125
LEU
125
A
VAL
126
n
126
VAL
126
A
ILE
127
n
127
ILE
127
A
GLY
128
n
128
GLY
128
A
ALA
129
n
129
ALA
129
A
ASN
130
n
130
ASN
130
A
ASP
131
n
131
ASP
131
A
THR
132
n
132
THR
132
A
VAL
133
n
133
VAL
133
A
ASN
134
n
134
ASN
134
A
SER
135
n
135
SER
135
A
ALA
136
n
136
ALA
136
A
ALA
137
n
137
ALA
137
A
GLN
138
n
138
GLN
138
A
GLU
139
n
139
GLU
139
A
ASP
140
n
140
ASP
140
A
PRO
141
n
141
PRO
141
A
ASN
142
n
142
ASN
142
A
SER
143
n
143
SER
143
A
ILE
144
n
144
ILE
144
A
ILE
145
n
145
ILE
145
A
ALA
146
n
146
ALA
146
A
GLY
147
n
147
GLY
147
A
MET
148
n
148
MET
148
A
PRO
149
n
149
PRO
149
A
VAL
150
n
150
VAL
150
A
LEU
151
n
151
LEU
151
A
GLU
152
n
152
GLU
152
A
VAL
153
n
153
VAL
153
A
TRP
154
n
154
TRP
154
A
LYS
155
n
155
LYS
155
A
SER
156
n
156
SER
156
A
LYS
157
n
157
LYS
157
A
GLN
158
n
158
GLN
158
A
VAL
159
n
159
VAL
159
A
ILE
160
n
160
ILE
160
A
VAL
161
n
161
VAL
161
A
MET
162
n
162
MET
162
A
LYS
163
n
163
LYS
163
A
ARG
164
n
164
ARG
164
A
SER
165
n
165
SER
165
A
LEU
166
n
166
LEU
166
A
GLY
167
n
167
GLY
167
A
VAL
168
n
168
VAL
168
A
GLY
169
n
169
GLY
169
A
TYR
170
n
170
TYR
170
A
ALA
171
n
171
ALA
171
A
ALA
172
n
172
ALA
172
A
VAL
173
n
173
VAL
173
A
ASP
174
n
174
ASP
174
A
ASN
175
n
175
ASN
175
A
PRO
176
n
176
PRO
176
A
ILE
177
n
177
ILE
177
A
PHE
178
n
178
PHE
178
A
TYR
179
n
179
TYR
179
A
LYS
180
n
180
LYS
180
A
PRO
181
n
181
PRO
181
A
ASN
182
n
182
ASN
182
A
THR
183
n
183
THR
183
A
ALA
184
n
184
ALA
184
A
MET
185
n
185
MET
185
A
LEU
186
n
186
LEU
186
A
LEU
187
n
187
LEU
187
A
GLY
188
n
188
GLY
188
A
ASP
189
n
189
ASP
189
A
ALA
190
n
190
ALA
190
A
LYS
191
n
191
LYS
191
A
LYS
192
n
192
LYS
192
A
THR
193
n
193
THR
193
A
CYS
194
n
194
CYS
194
A
ASP
195
n
195
ASP
195
A
ALA
196
n
196
ALA
196
A
LEU
197
n
197
LEU
197
A
GLN
198
n
198
GLN
198
A
ALA
199
n
199
ALA
199
A
LYS
200
n
200
LYS
200
A
VAL
201
n
201
VAL
201
A
ARG
202
n
202
ARG
202
A
GLU
203
n
203
GLU
203
A
SER
204
n
204
SER
204
A
n
205
205
A
n
206
206
A
n
207
207
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
n
10
10
B
n
11
11
B
n
12
12
B
n
13
13
B
n
14
14
B
n
15
15
B
n
16
16
B
n
17
17
B
n
18
18
B
n
19
19
B
n
20
20
B
n
21
21
B
n
22
22
B
PRO
23
n
23
PRO
23
B
MET
24
n
24
MET
24
B
GLU
25
n
25
GLU
25
B
ILE
26
n
26
ILE
26
B
SER
27
n
27
SER
27
B
GLY
28
n
28
GLY
28
B
THR
29
n
29
THR
29
B
HIS
30
n
30
HIS
30
B
THR
31
n
31
THR
31
B
GLU
32
n
32
GLU
32
B
ILE
33
n
33
ILE
33
B
ASN
34
n
34
ASN
34
B
LEU
35
n
35
LEU
35
B
ASP
36
n
36
ASP
36
B
ASN
37
n
37
ASN
37
B
ALA
38
n
38
ALA
38
B
ILE
39
n
39
ILE
39
B
ASP
40
n
40
ASP
40
B
MET
41
n
41
MET
41
B
ILE
42
n
42
ILE
42
B
ARG
43
n
43
ARG
43
B
GLU
44
n
44
GLU
44
B
ALA
45
n
45
ALA
45
B
ASN
46
n
46
ASN
46
B
SER
47
n
47
SER
47
B
ILE
48
n
48
ILE
48
B
ILE
49
n
49
ILE
49
B
ILE
50
n
50
ILE
50
B
THR
51
n
51
THR
51
B
PRO
52
n
52
PRO
52
B
GLY
53
n
53
GLY
53
B
TYR
54
n
54
TYR
54
B
GLY
55
n
55
GLY
55
B
LEU
56
n
56
LEU
56
B
CYS
57
n
57
CYS
57
B
ALA
58
n
58
ALA
58
B
ALA
59
n
59
ALA
59
B
LYS
60
n
60
LYS
60
B
ALA
61
n
61
ALA
61
B
GLN
62
n
62
GLN
62
B
TYR
63
n
63
TYR
63
B
PRO
64
n
64
PRO
64
B
ILE
65
n
65
ILE
65
B
ALA
66
n
66
ALA
66
B
ASP
67
n
67
ASP
67
B
LEU
68
n
68
LEU
68
B
VAL
69
n
69
VAL
69
B
LYS
70
n
70
LYS
70
B
MET
71
n
71
MET
71
B
LEU
72
n
72
LEU
72
B
THR
73
n
73
THR
73
B
GLU
74
n
74
GLU
74
B
GLN
75
n
75
GLN
75
B
GLY
76
n
76
GLY
76
B
LYS
77
n
77
LYS
77
B
LYS
78
n
78
LYS
78
B
VAL
79
n
79
VAL
79
B
ARG
80
n
80
ARG
80
B
PHE
81
n
81
PHE
81
B
GLY
82
n
82
GLY
82
B
ILE
83
n
83
ILE
83
B
HIS
84
n
84
HIS
84
B
PRO
85
n
85
PRO
85
B
VAL
86
n
86
VAL
86
B
ALA
87
n
87
ALA
87
B
GLY
88
n
88
GLY
88
B
ARG
89
n
89
ARG
89
B
MET
90
n
90
MET
90
B
PRO
91
n
91
PRO
91
B
GLY
92
n
92
GLY
92
B
GLN
93
n
93
GLN
93
B
LEU
94
n
94
LEU
94
B
ASN
95
n
95
ASN
95
B
VAL
96
n
96
VAL
96
B
LEU
97
n
97
LEU
97
B
LEU
98
n
98
LEU
98
B
ALA
99
n
99
ALA
99
B
GLU
100
n
100
GLU
100
B
ALA
101
n
101
ALA
101
B
GLY
102
n
102
GLY
102
B
VAL
103
n
103
VAL
103
B
PRO
104
n
104
PRO
104
B
TYR
105
n
105
TYR
105
B
ASP
106
n
106
ASP
106
B
ILE
107
n
107
ILE
107
B
VAL
108
n
108
VAL
108
B
LEU
109
n
109
LEU
109
B
GLU
110
n
110
GLU
110
B
MET
111
n
111
MET
111
B
ASP
112
n
112
ASP
112
B
GLU
113
n
113
GLU
113
B
ILE
114
n
114
ILE
114
B
ASN
115
n
115
ASN
115
B
HIS
116
n
116
HIS
116
B
ASP
117
n
117
ASP
117
B
PHE
118
n
118
PHE
118
B
PRO
119
n
119
PRO
119
B
ASP
120
n
120
ASP
120
B
THR
121
n
121
THR
121
B
ASP
122
n
122
ASP
122
B
LEU
123
n
123
LEU
123
B
VAL
124
n
124
VAL
124
B
LEU
125
n
125
LEU
125
B
VAL
126
n
126
VAL
126
B
ILE
127
n
127
ILE
127
B
GLY
128
n
128
GLY
128
B
ALA
129
n
129
ALA
129
B
ASN
130
n
130
ASN
130
B
ASP
131
n
131
ASP
131
B
THR
132
n
132
THR
132
B
VAL
133
n
133
VAL
133
B
ASN
134
n
134
ASN
134
B
SER
135
n
135
SER
135
B
ALA
136
n
136
ALA
136
B
ALA
137
n
137
ALA
137
B
GLN
138
n
138
GLN
138
B
GLU
139
n
139
GLU
139
B
ASP
140
n
140
ASP
140
B
PRO
141
n
141
PRO
141
B
ASN
142
n
142
ASN
142
B
SER
143
n
143
SER
143
B
ILE
144
n
144
ILE
144
B
ILE
145
n
145
ILE
145
B
ALA
146
n
146
ALA
146
B
GLY
147
n
147
GLY
147
B
MET
148
n
148
MET
148
B
PRO
149
n
149
PRO
149
B
VAL
150
n
150
VAL
150
B
LEU
151
n
151
LEU
151
B
GLU
152
n
152
GLU
152
B
VAL
153
n
153
VAL
153
B
TRP
154
n
154
TRP
154
B
LYS
155
n
155
LYS
155
B
SER
156
n
156
SER
156
B
LYS
157
n
157
LYS
157
B
GLN
158
n
158
GLN
158
B
VAL
159
n
159
VAL
159
B
ILE
160
n
160
ILE
160
B
VAL
161
n
161
VAL
161
B
MET
162
n
162
MET
162
B
LYS
163
n
163
LYS
163
B
ARG
164
n
164
ARG
164
B
SER
165
n
165
SER
165
B
LEU
166
n
166
LEU
166
B
GLY
167
n
167
GLY
167
B
VAL
168
n
168
VAL
168
B
GLY
169
n
169
GLY
169
B
TYR
170
n
170
TYR
170
B
ALA
171
n
171
ALA
171
B
ALA
172
n
172
ALA
172
B
VAL
173
n
173
VAL
173
B
ASP
174
n
174
ASP
174
B
ASN
175
n
175
ASN
175
B
PRO
176
n
176
PRO
176
B
ILE
177
n
177
ILE
177
B
PHE
178
n
178
PHE
178
B
TYR
179
n
179
TYR
179
B
LYS
180
n
180
LYS
180
B
PRO
181
n
181
PRO
181
B
ASN
182
n
182
ASN
182
B
THR
183
n
183
THR
183
B
ALA
184
n
184
ALA
184
B
MET
185
n
185
MET
185
B
LEU
186
n
186
LEU
186
B
LEU
187
n
187
LEU
187
B
GLY
188
n
188
GLY
188
B
ASP
189
n
189
ASP
189
B
ALA
190
n
190
ALA
190
B
LYS
191
n
191
LYS
191
B
LYS
192
n
192
LYS
192
B
THR
193
n
193
THR
193
B
CYS
194
n
194
CYS
194
B
ASP
195
n
195
ASP
195
B
ALA
196
n
196
ALA
196
B
LEU
197
n
197
LEU
197
B
GLN
198
n
198
GLN
198
B
ALA
199
n
199
ALA
199
B
LYS
200
n
200
LYS
200
B
VAL
201
n
201
VAL
201
B
ARG
202
n
202
ARG
202
B
GLU
203
n
203
GLU
203
B
SER
204
n
204
SER
204
B
n
205
205
B
n
206
206
B
n
207
207
B
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
4
tetrameric
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
2
dimeric
12020
-91
29840
5450
-38
15480
4370
-41
16500
4690
-39
16300
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_665
-y+1,-x+1,-z+1/4
crystal symmetry operation
57.4000000000
57.4000000000
62.7825000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_655
x+1,y,z
crystal symmetry operation
57.4000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_655
-y+1,-x,-z+1/4
crystal symmetry operation
57.4000000000
0.0000000000
62.7825000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
109
A
O
LEU
109
A
N
ILE
83
A
N
ILE
83
A
O
LYS
78
A
O
LYS
78
A
N
ILE
48
A
N
ILE
48
A
N
ILE
49
A
N
ILE
49
A
O
LEU
123
A
O
LEU
123
A
N
VAL
126
A
N
VAL
126
A
O
MET
162
A
O
MET
162
A
N
VAL
159
A
N
VAL
159
A
O
ALA
184
A
O
ALA
184
B
O
LEU
109
B
O
LEU
109
B
N
ILE
83
B
N
ILE
83
B
O
LYS
78
B
O
LYS
78
B
N
ILE
48
B
N
ILE
48
B
N
ILE
49
B
N
ILE
49
B
O
LEU
125
B
O
LEU
125
B
N
VAL
126
B
N
VAL
126
B
O
MET
162
B
O
MET
162
B
N
VAL
159
B
N
VAL
159
B
O
ALA
184
B
O
ALA
184
1
A
HOH
322
I
HOH
1
B
HOH
368
J
HOH
1
B
HOH
377
J
HOH
1
A
MET
1
A
MET
1
1
Y
1
A
ASN
2
A
ASN
2
1
Y
1
A
ARG
3
A
ARG
3
1
Y
1
A
SER
4
A
SER
4
1
Y
1
A
LEU
5
A
LEU
5
1
Y
1
A
ALA
6
A
ALA
6
1
Y
1
A
ASN
7
A
ASN
7
1
Y
1
A
VAL
8
A
VAL
8
1
Y
1
A
ILE
9
A
ILE
9
1
Y
1
A
LEU
10
A
LEU
10
1
Y
1
A
GLY
11
A
GLY
11
1
Y
1
A
GLY
12
A
GLY
12
1
Y
1
A
TYR
13
A
TYR
13
1
Y
1
A
GLY
14
A
GLY
14
1
Y
1
A
THR
15
A
THR
15
1
Y
1
A
THR
16
A
THR
16
1
Y
1
A
SER
17
A
SER
17
1
Y
1
A
THR
18
A
THR
18
1
Y
1
A
ALA
19
A
ALA
19
1
Y
1
A
GLY
20
A
GLY
20
1
Y
1
A
GLY
21
A
GLY
21
1
Y
1
A
LYS
22
A
LYS
22
1
Y
1
A
TYR
205
A
TYR
205
1
Y
1
A
GLN
206
A
GLN
206
1
Y
1
A
LYS
207
A
LYS
207
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
ASN
2
B
ASN
2
1
Y
1
B
ARG
3
B
ARG
3
1
Y
1
B
SER
4
B
SER
4
1
Y
1
B
LEU
5
B
LEU
5
1
Y
1
B
ALA
6
B
ALA
6
1
Y
1
B
ASN
7
B
ASN
7
1
Y
1
B
VAL
8
B
VAL
8
1
Y
1
B
ILE
9
B
ILE
9
1
Y
1
B
LEU
10
B
LEU
10
1
Y
1
B
GLY
11
B
GLY
11
1
Y
1
B
GLY
12
B
GLY
12
1
Y
1
B
TYR
13
B
TYR
13
1
Y
1
B
GLY
14
B
GLY
14
1
Y
1
B
THR
15
B
THR
15
1
Y
1
B
THR
16
B
THR
16
1
Y
1
B
SER
17
B
SER
17
1
Y
1
B
THR
18
B
THR
18
1
Y
1
B
ALA
19
B
ALA
19
1
Y
1
B
GLY
20
B
GLY
20
1
Y
1
B
GLY
21
B
GLY
21
1
Y
1
B
LYS
22
B
LYS
22
1
Y
1
B
TYR
205
B
TYR
205
1
Y
1
B
GLN
206
B
GLN
206
1
Y
1
B
LYS
207
B
LYS
207
1
Y
1
A
ASN
130
-154.99
-73.24
1
A
SER
165
-165.43
-161.00
1
A
GLU
203
-77.19
29.78
1
B
GLU
25
-165.08
95.15
1
B
GLN
75
-64.44
8.12
1
B
ASN
130
-146.34
-75.42
protein_rep.param
thio_het.par
water_rep.param
ion.param
38.71
0.278
0.219
2.42
36.8
102352
100817
98.5
RANDOM
1
Isotropic
THROUGHOUT
MOLECULAR REPLACEMENT
PDB ENTRY 1DJL
Engh & Huber
2.42
36.8
171
3043
118
0
2754
0.0071
1.247
1.400
1.5
1.982
2.0
2.341
2.0
2.960
2.5
0.278
0.219
2.45
5040
100817
98.5
50.91
2.42
36.82
1PT9
102352
100817
0.077
1
6.8
98.5
2.42
2.55
2.2
2312
0.319
1
96.2
data reduction
MOSFLM
data scaling
SCALA
refinement
CNS
data scaling
CCP4
(SCALA)
phasing
CNS
Crystal Structure Analysis of the DIII Component of Transhydrogenase with a Thio-Nicotinamide Nucleotide Analogue
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
ASN
34
A
ASN
34
HELX_P
A
ALA
45
A
ALA
45
1
1
12
A
GLY
53
A
GLY
53
HELX_P
A
LYS
60
A
LYS
60
1
2
8
A
ALA
61
A
ALA
61
HELX_P
A
GLU
74
A
GLU
74
1
3
14
A
GLY
92
A
GLY
92
HELX_P
A
GLY
102
A
GLY
102
1
4
11
A
PRO
104
A
PRO
104
HELX_P
A
ASP
106
A
ASP
106
5
5
3
A
MET
111
A
MET
111
HELX_P
A
ASN
115
A
ASN
115
1
6
5
A
HIS
116
A
HIS
116
HELX_P
A
PHE
118
A
PHE
118
5
7
3
A
ASN
130
A
ASN
130
HELX_P
A
ASN
134
A
ASN
134
5
8
5
A
SER
135
A
SER
135
HELX_P
A
ASP
140
A
ASP
140
1
9
6
A
GLU
152
A
GLU
152
HELX_P
A
SER
156
A
SER
156
5
10
5
A
ASN
175
A
ASN
175
HELX_P
A
LYS
180
A
LYS
180
5
11
6
A
ASP
189
A
ASP
189
HELX_P
A
GLU
203
A
GLU
203
1
12
15
B
ASN
34
B
ASN
34
HELX_P
B
ALA
45
B
ALA
45
1
13
12
B
GLY
53
B
GLY
53
HELX_P
B
ALA
59
B
ALA
59
1
14
7
B
ALA
61
B
ALA
61
HELX_P
B
GLN
75
B
GLN
75
1
15
15
B
GLY
92
B
GLY
92
HELX_P
B
ALA
101
B
ALA
101
1
16
10
B
PRO
104
B
PRO
104
HELX_P
B
ASP
106
B
ASP
106
5
17
3
B
MET
111
B
MET
111
HELX_P
B
ASN
115
B
ASN
115
1
18
5
B
HIS
116
B
HIS
116
HELX_P
B
THR
121
B
THR
121
5
19
6
B
ASN
130
B
ASN
130
HELX_P
B
ASN
134
B
ASN
134
5
20
5
B
SER
135
B
SER
135
HELX_P
B
ASP
140
B
ASP
140
1
21
6
B
GLU
152
B
GLU
152
HELX_P
B
SER
156
B
SER
156
5
22
5
B
ASN
175
B
ASN
175
HELX_P
B
LYS
180
B
LYS
180
5
23
6
B
ASP
189
B
ASP
189
HELX_P
B
GLU
203
B
GLU
203
1
24
15
OXIDOREDUCTASE
Transhydrogenase, thio-nicotinamide, mitochondria, proton translocation, OXIDOREDUCTASE
NNTM_HUMAN
UNP
1
880
Q13423
MNRSLANVILGGYGTTSTAGGKPMEISGTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVR
FGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVI
VMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRESYQK
880
1086
1PT9
1
207
Q13423
A
1
1
207
880
1086
1PT9
1
207
Q13423
B
1
1
207
6
6
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
VAL
108
A
VAL
108
A
GLU
110
A
GLU
110
A
LYS
78
A
LYS
78
A
ILE
83
A
ILE
83
A
SER
47
A
SER
47
A
PRO
52
A
PRO
52
A
LEU
123
A
LEU
123
A
ILE
127
A
ILE
127
A
GLN
158
A
GLN
158
A
MET
162
A
MET
162
A
THR
183
A
THR
183
A
MET
185
A
MET
185
B
VAL
108
B
VAL
108
B
GLU
110
B
GLU
110
B
LYS
78
B
LYS
78
B
ILE
83
B
ILE
83
B
SER
47
B
SER
47
B
PRO
52
B
PRO
52
B
LEU
123
B
LEU
123
B
ILE
127
B
ILE
127
B
GLN
158
B
GLN
158
B
LYS
163
B
LYS
163
B
THR
183
B
THR
183
B
LEU
187
B
LEU
187
BINDING SITE FOR RESIDUE SO4 A 208
A
SO4
208
Software
3
BINDING SITE FOR RESIDUE SO4 B 210
B
SO4
210
Software
3
BINDING SITE FOR RESIDUE TAP A 300
A
TAP
300
Software
30
BINDING SITE FOR RESIDUE TAP B 301
B
TAP
301
Software
29
BINDING SITE FOR RESIDUE GOL A 220
A
GOL
220
Software
8
BINDING SITE FOR RESIDUE GOL B 230
B
GOL
230
Software
6
A
ARG
164
A
ARG
164
3
1_555
A
HOH
356
I
HOH
3
1_555
A
HOH
363
I
HOH
3
1_555
B
ARG
164
B
ARG
164
3
1_555
B
HOH
338
J
HOH
3
1_555
B
HOH
362
J
HOH
3
1_555
A
GLY
53
A
GLY
53
30
1_555
A
TYR
54
A
TYR
54
30
1_555
A
GLY
55
A
GLY
55
30
1_555
A
VAL
86
A
VAL
86
30
1_555
A
ALA
87
A
ALA
87
30
1_555
A
GLY
88
A
GLY
88
30
1_555
A
ARG
89
A
ARG
89
30
1_555
A
MET
90
A
MET
90
30
1_555
A
PRO
91
A
PRO
91
30
1_555
A
GLY
128
A
GLY
128
30
1_555
A
ALA
129
A
ALA
129
30
1_555
A
ASN
130
A
ASN
130
30
1_555
A
ASP
131
A
ASP
131
30
1_555
A
THR
132
A
THR
132
30
1_555
A
ALA
146
A
ALA
146
30
8_665
A
GLY
147
A
GLY
147
30
8_665
A
LYS
163
A
LYS
163
30
1_555
A
ARG
164
A
ARG
164
30
1_555
A
SER
165
A
SER
165
30
1_555
A
VAL
168
A
VAL
168
30
1_555
A
GLY
169
A
GLY
169
30
1_555
A
TYR
170
A
TYR
170
30
1_555
A
ASP
189
A
ASP
189
30
1_555
A
ALA
190
A
ALA
190
30
1_555
A
GOL
220
E
GOL
30
1_555
A
HOH
305
I
HOH
30
1_555
A
HOH
328
I
HOH
30
1_555
A
HOH
332
I
HOH
30
1_555
A
HOH
385
I
HOH
30
1_555
A
HOH
386
I
HOH
30
1_555
B
GLY
53
B
GLY
53
29
1_555
B
TYR
54
B
TYR
54
29
1_555
B
GLY
55
B
GLY
55
29
1_555
B
ALA
59
B
ALA
59
29
1_555
B
VAL
86
B
VAL
86
29
1_555
B
ALA
87
B
ALA
87
29
1_555
B
GLY
88
B
GLY
88
29
1_555
B
ARG
89
B
ARG
89
29
1_555
B
MET
90
B
MET
90
29
1_555
B
PRO
91
B
PRO
91
29
1_555
B
GLY
128
B
GLY
128
29
1_555
B
ALA
129
B
ALA
129
29
1_555
B
ASN
130
B
ASN
130
29
1_555
B
ASP
131
B
ASP
131
29
1_555
B
THR
132
B
THR
132
29
1_555
B
LYS
163
B
LYS
163
29
1_555
B
ARG
164
B
ARG
164
29
1_555
B
SER
165
B
SER
165
29
1_555
B
VAL
168
B
VAL
168
29
1_555
B
GLY
169
B
GLY
169
29
1_555
B
TYR
170
B
TYR
170
29
1_555
B
ASP
189
B
ASP
189
29
1_555
B
ALA
190
B
ALA
190
29
1_555
B
GOL
230
H
GOL
29
1_555
B
HOH
305
J
HOH
29
1_555
B
HOH
312
J
HOH
29
1_555
B
HOH
338
J
HOH
29
1_555
B
HOH
348
J
HOH
29
1_555
B
HOH
371
J
HOH
29
1_555
A
HIS
84
A
HIS
84
8
1_555
A
VAL
86
A
VAL
86
8
1_555
A
ASP
131
A
ASP
131
8
1_555
A
MET
148
A
MET
148
8
1_555
A
PRO
149
A
PRO
149
8
1_555
A
VAL
150
A
VAL
150
8
1_555
A
TAP
300
D
TAP
8
1_555
A
HOH
376
I
HOH
8
1_555
B
HIS
84
B
HIS
84
6
1_555
B
VAL
86
B
VAL
86
6
1_555
B
ASP
131
B
ASP
131
6
1_555
B
MET
148
B
MET
148
6
1_555
B
VAL
150
B
VAL
150
6
1_555
B
TAP
301
G
TAP
6
1_555
91
P 41 2 2