1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Kim, B. Ryu, K.-S. Kim, H.J. Choi, B.-S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Febs J. 1742-464X 272 2467 2476 10.1111/j.1742-4658.2005.04667.x 15885096 Solution structure and backbone dynamics of the XPC-binding domain of the human DNA repair protein hHR23B. 2005 10.2210/pdb1pve/pdb pdb_00001pve 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 8145.148 UV excision repair protein RAD23 homolog B XPC binding domain 1 man polymer HHR23B no no GSHMPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGG GSHMPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample HH23B 9606 Homo sapiens 562 Escherichia coli BL21(DE3)pLysS PLASMID pET15b database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2004-08-10 1 1 2008-04-29 1 2 2011-07-13 1 3 2022-03-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_ref_seq_dif.details RCSB Y PDBJ 2003-06-27 REL REL the structures are based on a total of 1312 restraints, 1242 are NOE-derived distance constraints, 70 dihedral angle restraints ( 14 from Jhnha and 56 from TALOS) structures with the least restraint violations 50 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY HNHA 40mM Sodium Phosphate, 160mM Sodium Chloride, 10mM CHAPS 7.0 1 atm 300 K Automatic NOE assignment, distance geometry, simulated annealing, molecular dynamics 20 closest to the average 1mM hHR23B(275-342) U-15N, 13C; 40mM phosphate buffer NA; 10mM CHAPS NA 90% H2O/10% D2O Varian collection VNMR 6.3c Frank Delaglio processing NMRPipe Peter Guentert structure solution CYANA 1.6 David A. Case etc refinement Amber 7 600 Varian INOVA GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A HIS 3 n 3 HIS 3 A MET 4 n 4 MET 4 A PRO 5 n 5 PRO 5 A LEU 6 n 6 LEU 6 A GLU 7 n 7 GLU 7 A PHE 8 n 8 PHE 8 A LEU 9 n 9 LEU 9 A ARG 10 n 10 ARG 10 A ASN 11 n 11 ASN 11 A GLN 12 n 12 GLN 12 A PRO 13 n 13 PRO 13 A GLN 14 n 14 GLN 14 A PHE 15 n 15 PHE 15 A GLN 16 n 16 GLN 16 A GLN 17 n 17 GLN 17 A MET 18 n 18 MET 18 A ARG 19 n 19 ARG 19 A GLN 20 n 20 GLN 20 A ILE 21 n 21 ILE 21 A ILE 22 n 22 ILE 22 A GLN 23 n 23 GLN 23 A GLN 24 n 24 GLN 24 A ASN 25 n 25 ASN 25 A PRO 26 n 26 PRO 26 A SER 27 n 27 SER 27 A LEU 28 n 28 LEU 28 A LEU 29 n 29 LEU 29 A PRO 30 n 30 PRO 30 A ALA 31 n 31 ALA 31 A LEU 32 n 32 LEU 32 A LEU 33 n 33 LEU 33 A GLN 34 n 34 GLN 34 A GLN 35 n 35 GLN 35 A ILE 36 n 36 ILE 36 A GLY 37 n 37 GLY 37 A ARG 38 n 38 ARG 38 A GLU 39 n 39 GLU 39 A ASN 40 n 40 ASN 40 A PRO 41 n 41 PRO 41 A GLN 42 n 42 GLN 42 A LEU 43 n 43 LEU 43 A LEU 44 n 44 LEU 44 A GLN 45 n 45 GLN 45 A GLN 46 n 46 GLN 46 A ILE 47 n 47 ILE 47 A SER 48 n 48 SER 48 A GLN 49 n 49 GLN 49 A HIS 50 n 50 HIS 50 A GLN 51 n 51 GLN 51 A GLU 52 n 52 GLU 52 A HIS 53 n 53 HIS 53 A PHE 54 n 54 PHE 54 A ILE 55 n 55 ILE 55 A GLN 56 n 56 GLN 56 A MET 57 n 57 MET 57 A LEU 58 n 58 LEU 58 A ASN 59 n 59 ASN 59 A GLU 60 n 60 GLU 60 A PRO 61 n 61 PRO 61 A VAL 62 n 62 VAL 62 A GLN 63 n 63 GLN 63 A GLU 64 n 64 GLU 64 A ALA 65 n 65 ALA 65 A GLY 66 n 66 GLY 66 A GLY 67 n 67 GLY 67 A GLN 68 n 68 GLN 68 A GLY 69 n 69 GLY 69 A GLY 70 n 70 GLY 70 A GLY 71 n 71 GLY 71 A GLY 72 n 72 GLY 72 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 20 A ARG 19 0.080 SIDE CHAIN 3 3.80 0.50 120.30 124.10 A A A NE CZ NH1 ARG ARG ARG 10 10 10 N 3 3.77 0.50 120.30 124.07 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 6 3.02 0.50 120.30 123.32 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 7 3.02 0.50 120.30 123.32 A A A NE CZ NH1 ARG ARG ARG 10 10 10 N 7 3.02 0.50 120.30 123.32 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 11 3.01 0.50 120.30 123.31 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 12 4.03 0.50 120.30 124.33 A A A NE CZ NH1 ARG ARG ARG 10 10 10 N 12 3.35 0.50 120.30 123.65 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 13 3.36 0.50 120.30 123.66 A A A NE CZ NH1 ARG ARG ARG 10 10 10 N 13 3.36 0.50 120.30 123.66 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 14 3.04 0.50 120.30 123.34 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 15 4.07 0.50 120.30 124.37 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 16 3.33 0.50 120.30 123.63 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 18 3.72 0.50 120.30 124.02 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 20 3.29 0.50 120.30 123.59 A A A NE CZ NH1 ARG ARG ARG 19 19 19 N 1 A MET 4 -156.16 86.22 1 A GLN 17 -130.75 -47.68 3 A SER 2 -153.96 37.78 3 A LEU 6 61.53 -10.02 3 A HIS 50 -141.63 28.47 3 A ALA 65 -144.76 -10.39 4 A GLN 17 -128.83 -50.46 4 A ASN 40 -154.16 73.35 4 A HIS 50 -140.63 20.80 5 A HIS 50 -141.69 24.30 5 A GLU 64 58.96 -166.03 6 A LEU 6 57.64 20.00 6 A ARG 10 -69.97 26.97 6 A PRO 61 -49.91 154.25 7 A GLN 23 -67.87 2.75 7 A ASN 40 -151.87 73.20 8 A GLU 7 -150.57 -26.52 8 A GLN 23 -68.91 2.30 9 A LEU 6 60.94 -6.57 10 A ASN 11 -144.46 19.79 10 A GLN 17 -128.12 -51.15 10 A GLN 23 -67.95 2.26 10 A ASN 40 -151.84 72.90 10 A GLN 63 63.32 -2.65 11 A MET 4 65.43 153.19 11 A GLN 23 -66.40 0.68 11 A ASN 40 -153.66 72.69 12 A ASN 11 -144.23 22.22 12 A GLN 14 48.56 -22.96 12 A GLN 17 -131.68 -51.26 12 A GLU 64 72.41 -42.96 12 A ALA 65 -141.61 -8.47 13 A GLN 14 59.14 -15.98 13 A GLN 23 -69.13 1.44 13 A ASN 40 -158.82 76.13 13 A HIS 50 -141.18 27.52 13 A GLU 64 -137.92 -40.51 13 A ALA 65 47.78 18.90 14 A ALA 65 58.19 -28.49 15 A MET 4 -151.06 21.77 15 A ARG 10 -69.72 2.52 16 A ASN 40 -155.19 74.75 17 A SER 2 -69.68 91.54 17 A GLN 17 -135.02 -42.04 17 A HIS 50 -140.78 26.18 18 A SER 2 -142.20 -31.17 18 A HIS 3 -150.70 -22.21 18 A ASN 40 -151.36 61.26 18 A GLN 63 55.48 17.69 18 A GLU 64 -147.11 -31.46 19 A SER 2 57.49 -174.67 19 A GLN 23 -66.91 2.79 19 A ASN 40 -151.70 74.88 19 A HIS 50 -140.84 18.24 19 A GLN 63 -145.94 -41.77 19 A ALA 65 -150.14 -18.88 20 A HIS 3 58.15 172.08 20 A GLN 23 -67.26 2.29 20 A GLU 39 -142.54 -25.49 20 A GLN 56 -59.60 -9.95 20 A GLN 68 -140.59 13.62 Solution structure of XPC binding domain of hHR23B 1 N N A LEU 6 A LEU 6 HELX_P A ARG 10 A ARG 10 5 1 5 A GLN 17 A GLN 17 HELX_P A GLN 23 A GLN 23 1 2 7 A ASN 25 A ASN 25 HELX_P A SER 27 A SER 27 5 3 3 A LEU 28 A LEU 28 HELX_P A ARG 38 A ARG 38 1 4 11 A ASN 40 A ASN 40 HELX_P A GLN 49 A GLN 49 1 5 10 A HIS 50 A HIS 50 HELX_P A GLU 60 A GLU 60 1 6 11 A GLU 64 A GLU 64 HELX_P A GLY 69 A GLY 69 5 7 6 DNA BINDING PROTEIN hHR23B, XPC binding domain, NMR solution structure, Nucleotide excision repair, CHAPS, DNA BINDING PROTEIN A GLY 71 A GLY 71 8 A GLY 72 A GLY 72 -0.26 A GLY 67 A GLY 67 9 A GLN 68 A GLN 68 -3.55 A SER 2 A SER 2 16 A HIS 3 A HIS 3 -0.77 A GLU 64 A GLU 64 19 A ALA 65 A ALA 65 -7.18 A GLY 67 A GLY 67 19 A GLN 68 A GLN 68 -4.85 A GLY 71 A GLY 71 19 A GLY 72 A GLY 72 -5.20 RD23B_HUMAN UNP 1 275 P54727 PLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGG 275 342 1PVE 5 72 P54727 A 1 5 72 1 cloning artifact GLY 1 1PVE A P54727 UNP 1 1 cloning artifact SER 2 1PVE A P54727 UNP 2 1 cloning artifact HIS 3 1PVE A P54727 UNP 3 1 cloning artifact MET 4 1PVE A P54727 UNP 4