0.011813 0.000000 0.000000 0.000000 0.009393 0.000000 0.000000 0.000000 0.021277 0.00000 0.00000 0.00000 Vlassi, M. Athanasiadis, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 84.650 106.460 47.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 1 469 475 10.1038/nsb0794-469 7664066 Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV. 1994 UK J.Mol.Biol. JMOBAK 0070 0022-2836 222 451 Purification,Crystallization and Preliminary X-Ray Diffraction Studies of the PvuII Endonuclease 1991 UK Nucleic Acids Res. NARHAD 0389 0305-1048 18 6434 Complete Nucleotide Sequence of the PvuII Restriction Enzyme Gene from Proteus Vulgaris 1990 10.2210/pdb1pvu/pdb pdb_00001pvu 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 18239.799 Pvu II 3.1.21.4 2 man polymer 18.015 water 79 nat water no no SHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVLPGREGNDAVDNAGQEYELKSINIDLTKGFS THHHMNPVIIAKYRQVPWIFAIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY SHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVLPGREGNDAVDNAGQEYELKSINIDLTKGFS THHHMNPVIIAKYRQVPWIFAIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVMEHGTKIY A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Proteus sample 585 Proteus vulgaris 2.90 57.61 pdbx_database_status struct_conf struct_conf_type chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Derived calculations Other Data collection Database references 1 0 1995-03-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 1 4 2024-02-14 _pdbx_database_status.process_site _database_2.pdbx_DOI _database_2.pdbx_database_accession Y BNL 1995-03-09 REL HOH water HOH 1 2 HOH HOH 158 A HOH 2 2 HOH HOH 159 A HOH 3 2 HOH HOH 160 A HOH 4 2 HOH HOH 161 A HOH 5 2 HOH HOH 162 A HOH 6 2 HOH HOH 163 A HOH 7 2 HOH HOH 164 A HOH 10 2 HOH HOH 165 A HOH 12 2 HOH HOH 166 A HOH 13 2 HOH HOH 167 A HOH 14 2 HOH HOH 168 A HOH 15 2 HOH HOH 169 A HOH 17 2 HOH HOH 170 A HOH 23 2 HOH HOH 171 A HOH 28 2 HOH HOH 172 A HOH 29 2 HOH HOH 173 A HOH 30 2 HOH HOH 174 A HOH 31 2 HOH HOH 175 A HOH 32 2 HOH HOH 176 A HOH 33 2 HOH HOH 177 A HOH 34 2 HOH HOH 178 A HOH 36 2 HOH HOH 179 A HOH 37 2 HOH HOH 180 A HOH 38 2 HOH HOH 181 A HOH 39 2 HOH HOH 182 A HOH 40 2 HOH HOH 183 A HOH 41 2 HOH HOH 184 A HOH 47 2 HOH HOH 185 A HOH 49 2 HOH HOH 186 A HOH 53 2 HOH HOH 187 A HOH 56 2 HOH HOH 188 A HOH 57 2 HOH HOH 189 A HOH 58 2 HOH HOH 190 A HOH 62 2 HOH HOH 191 A HOH 63 2 HOH HOH 192 A HOH 64 2 HOH HOH 193 A HOH 65 2 HOH HOH 194 A HOH 66 2 HOH HOH 195 A HOH 67 2 HOH HOH 196 A HOH 68 2 HOH HOH 197 A HOH 69 2 HOH HOH 198 A HOH 70 2 HOH HOH 199 A HOH 71 2 HOH HOH 200 A HOH 74 2 HOH HOH 201 A HOH 75 2 HOH HOH 202 A HOH 76 2 HOH HOH 203 A HOH 77 2 HOH HOH 204 A HOH 78 2 HOH HOH 205 A HOH 79 2 HOH HOH 206 A HOH 8 2 HOH HOH 158 B HOH 9 2 HOH HOH 159 B HOH 11 2 HOH HOH 160 B HOH 16 2 HOH HOH 161 B HOH 18 2 HOH HOH 162 B HOH 19 2 HOH HOH 163 B HOH 20 2 HOH HOH 164 B HOH 21 2 HOH HOH 165 B HOH 22 2 HOH HOH 166 B HOH 24 2 HOH HOH 167 B HOH 25 2 HOH HOH 168 B HOH 26 2 HOH HOH 169 B HOH 27 2 HOH HOH 170 B HOH 35 2 HOH HOH 171 B HOH 42 2 HOH HOH 172 B HOH 43 2 HOH HOH 173 B HOH 44 2 HOH HOH 174 B HOH 45 2 HOH HOH 175 B HOH 46 2 HOH HOH 176 B HOH 48 2 HOH HOH 177 B HOH 50 2 HOH HOH 178 B HOH 51 2 HOH HOH 179 B HOH 52 2 HOH HOH 180 B HOH 54 2 HOH HOH 181 B HOH 55 2 HOH HOH 182 B HOH 59 2 HOH HOH 183 B HOH 60 2 HOH HOH 184 B HOH 61 2 HOH HOH 185 B HOH 72 2 HOH HOH 186 B HOH 73 2 HOH HOH 187 B SER 2 n 1 SER 2 A HIS 3 n 2 HIS 3 A PRO 4 n 3 PRO 4 A ASP 5 n 4 ASP 5 A LEU 6 n 5 LEU 6 A ASN 7 n 6 ASN 7 A LYS 8 n 7 LYS 8 A LEU 9 n 8 LEU 9 A LEU 10 n 9 LEU 10 A GLU 11 n 10 GLU 11 A LEU 12 n 11 LEU 12 A TRP 13 n 12 TRP 13 A PRO 14 n 13 PRO 14 A HIS 15 n 14 HIS 15 A ILE 16 n 15 ILE 16 A GLN 17 n 16 GLN 17 A GLU 18 n 17 GLU 18 A TYR 19 n 18 TYR 19 A GLN 20 n 19 GLN 20 A ASP 21 n 20 ASP 21 A LEU 22 n 21 LEU 22 A ALA 23 n 22 ALA 23 A LEU 24 n 23 LEU 24 A LYS 25 n 24 LYS 25 A HIS 26 n 25 HIS 26 A GLY 27 n 26 GLY 27 A ILE 28 n 27 ILE 28 A ASN 29 n 28 ASN 29 A ASP 30 n 29 ASP 30 A ILE 31 n 30 ILE 31 A PHE 32 n 31 PHE 32 A GLN 33 n 32 GLN 33 A ASP 34 n 33 ASP 34 A ASN 35 n 34 ASN 35 A GLY 36 n 35 GLY 36 A GLY 37 n 36 GLY 37 A LYS 38 n 37 LYS 38 A LEU 39 n 38 LEU 39 A LEU 40 n 39 LEU 40 A GLN 41 n 40 GLN 41 A VAL 42 n 41 VAL 42 A LEU 43 n 42 LEU 43 A LEU 44 n 43 LEU 44 A ILE 45 n 44 ILE 45 A THR 46 n 45 THR 46 A GLY 47 n 46 GLY 47 A LEU 48 n 47 LEU 48 A THR 49 n 48 THR 49 A VAL 50 n 49 VAL 50 A LEU 51 n 50 LEU 51 A PRO 52 n 51 PRO 52 A GLY 53 n 52 GLY 53 A n 53 54 A n 54 55 A GLY 56 n 55 GLY 56 A ASN 57 n 56 ASN 57 A ASP 58 n 57 ASP 58 A ALA 59 n 58 ALA 59 A VAL 60 n 59 VAL 60 A ASP 61 n 60 ASP 61 A ASN 62 n 61 ASN 62 A ALA 63 n 62 ALA 63 A GLY 64 n 63 GLY 64 A GLN 65 n 64 GLN 65 A GLU 66 n 65 GLU 66 A TYR 67 n 66 TYR 67 A GLU 68 n 67 GLU 68 A LEU 69 n 68 LEU 69 A LYS 70 n 69 LYS 70 A SER 71 n 70 SER 71 A ILE 72 n 71 ILE 72 A ASN 73 n 72 ASN 73 A ILE 74 n 73 ILE 74 A ASP 75 n 74 ASP 75 A LEU 76 n 75 LEU 76 A THR 77 n 76 THR 77 A LYS 78 n 77 LYS 78 A GLY 79 n 78 GLY 79 A PHE 80 n 79 PHE 80 A SER 81 n 80 SER 81 A THR 82 n 81 THR 82 A HIS 83 n 82 HIS 83 A HIS 84 n 83 HIS 84 A HIS 85 n 84 HIS 85 A MET 86 n 85 MET 86 A ASN 87 n 86 ASN 87 A PRO 88 n 87 PRO 88 A VAL 89 n 88 VAL 89 A ILE 90 n 89 ILE 90 A ILE 91 n 90 ILE 91 A ALA 92 n 91 ALA 92 A LYS 93 n 92 LYS 93 A TYR 94 n 93 TYR 94 A ARG 95 n 94 ARG 95 A GLN 96 n 95 GLN 96 A VAL 97 n 96 VAL 97 A PRO 98 n 97 PRO 98 A TRP 99 n 98 TRP 99 A ILE 100 n 99 ILE 100 A PHE 101 n 100 PHE 101 A ALA 102 n 101 ALA 102 A ILE 103 n 102 ILE 103 A TYR 104 n 103 TYR 104 A ARG 105 n 104 ARG 105 A GLY 106 n 105 GLY 106 A ILE 107 n 106 ILE 107 A ALA 108 n 107 ALA 108 A ILE 109 n 108 ILE 109 A GLU 110 n 109 GLU 110 A ALA 111 n 110 ALA 111 A ILE 112 n 111 ILE 112 A TYR 113 n 112 TYR 113 A ARG 114 n 113 ARG 114 A LEU 115 n 114 LEU 115 A GLU 116 n 115 GLU 116 A PRO 117 n 116 PRO 117 A LYS 118 n 117 LYS 118 A ASP 119 n 118 ASP 119 A LEU 120 n 119 LEU 120 A GLU 121 n 120 GLU 121 A PHE 122 n 121 PHE 122 A TYR 123 n 122 TYR 123 A TYR 124 n 123 TYR 124 A ASP 125 n 124 ASP 125 A LYS 126 n 125 LYS 126 A TRP 127 n 126 TRP 127 A GLU 128 n 127 GLU 128 A ARG 129 n 128 ARG 129 A LYS 130 n 129 LYS 130 A TRP 131 n 130 TRP 131 A TYR 132 n 131 TYR 132 A SER 133 n 132 SER 133 A ASP 134 n 133 ASP 134 A GLY 135 n 134 GLY 135 A HIS 136 n 135 HIS 136 A LYS 137 n 136 LYS 137 A ASP 138 n 137 ASP 138 A ILE 139 n 138 ILE 139 A ASN 140 n 139 ASN 140 A ASN 141 n 140 ASN 141 A PRO 142 n 141 PRO 142 A LYS 143 n 142 LYS 143 A ILE 144 n 143 ILE 144 A PRO 145 n 144 PRO 145 A VAL 146 n 145 VAL 146 A LYS 147 n 146 LYS 147 A TYR 148 n 147 TYR 148 A VAL 149 n 148 VAL 149 A MET 150 n 149 MET 150 A GLU 151 n 150 GLU 151 A HIS 152 n 151 HIS 152 A GLY 153 n 152 GLY 153 A THR 154 n 153 THR 154 A LYS 155 n 154 LYS 155 A ILE 156 n 155 ILE 156 A TYR 157 n 156 TYR 157 A SER 2 n 1 SER 2 B HIS 3 n 2 HIS 3 B PRO 4 n 3 PRO 4 B ASP 5 n 4 ASP 5 B LEU 6 n 5 LEU 6 B ASN 7 n 6 ASN 7 B LYS 8 n 7 LYS 8 B LEU 9 n 8 LEU 9 B LEU 10 n 9 LEU 10 B GLU 11 n 10 GLU 11 B LEU 12 n 11 LEU 12 B TRP 13 n 12 TRP 13 B PRO 14 n 13 PRO 14 B HIS 15 n 14 HIS 15 B ILE 16 n 15 ILE 16 B GLN 17 n 16 GLN 17 B GLU 18 n 17 GLU 18 B TYR 19 n 18 TYR 19 B GLN 20 n 19 GLN 20 B ASP 21 n 20 ASP 21 B LEU 22 n 21 LEU 22 B ALA 23 n 22 ALA 23 B LEU 24 n 23 LEU 24 B LYS 25 n 24 LYS 25 B HIS 26 n 25 HIS 26 B GLY 27 n 26 GLY 27 B ILE 28 n 27 ILE 28 B ASN 29 n 28 ASN 29 B ASP 30 n 29 ASP 30 B ILE 31 n 30 ILE 31 B PHE 32 n 31 PHE 32 B GLN 33 n 32 GLN 33 B ASP 34 n 33 ASP 34 B ASN 35 n 34 ASN 35 B GLY 36 n 35 GLY 36 B GLY 37 n 36 GLY 37 B LYS 38 n 37 LYS 38 B LEU 39 n 38 LEU 39 B LEU 40 n 39 LEU 40 B GLN 41 n 40 GLN 41 B VAL 42 n 41 VAL 42 B LEU 43 n 42 LEU 43 B LEU 44 n 43 LEU 44 B ILE 45 n 44 ILE 45 B THR 46 n 45 THR 46 B GLY 47 n 46 GLY 47 B LEU 48 n 47 LEU 48 B THR 49 n 48 THR 49 B VAL 50 n 49 VAL 50 B LEU 51 n 50 LEU 51 B PRO 52 n 51 PRO 52 B GLY 53 n 52 GLY 53 B n 53 54 B n 54 55 B GLY 56 n 55 GLY 56 B ASN 57 n 56 ASN 57 B ASP 58 n 57 ASP 58 B ALA 59 n 58 ALA 59 B VAL 60 n 59 VAL 60 B ASP 61 n 60 ASP 61 B ASN 62 n 61 ASN 62 B ALA 63 n 62 ALA 63 B GLY 64 n 63 GLY 64 B GLN 65 n 64 GLN 65 B GLU 66 n 65 GLU 66 B TYR 67 n 66 TYR 67 B GLU 68 n 67 GLU 68 B LEU 69 n 68 LEU 69 B LYS 70 n 69 LYS 70 B SER 71 n 70 SER 71 B ILE 72 n 71 ILE 72 B ASN 73 n 72 ASN 73 B ILE 74 n 73 ILE 74 B ASP 75 n 74 ASP 75 B LEU 76 n 75 LEU 76 B THR 77 n 76 THR 77 B LYS 78 n 77 LYS 78 B GLY 79 n 78 GLY 79 B PHE 80 n 79 PHE 80 B SER 81 n 80 SER 81 B THR 82 n 81 THR 82 B HIS 83 n 82 HIS 83 B HIS 84 n 83 HIS 84 B HIS 85 n 84 HIS 85 B MET 86 n 85 MET 86 B ASN 87 n 86 ASN 87 B PRO 88 n 87 PRO 88 B VAL 89 n 88 VAL 89 B ILE 90 n 89 ILE 90 B ILE 91 n 90 ILE 91 B ALA 92 n 91 ALA 92 B LYS 93 n 92 LYS 93 B TYR 94 n 93 TYR 94 B ARG 95 n 94 ARG 95 B GLN 96 n 95 GLN 96 B VAL 97 n 96 VAL 97 B PRO 98 n 97 PRO 98 B TRP 99 n 98 TRP 99 B ILE 100 n 99 ILE 100 B PHE 101 n 100 PHE 101 B ALA 102 n 101 ALA 102 B ILE 103 n 102 ILE 103 B TYR 104 n 103 TYR 104 B ARG 105 n 104 ARG 105 B GLY 106 n 105 GLY 106 B ILE 107 n 106 ILE 107 B ALA 108 n 107 ALA 108 B ILE 109 n 108 ILE 109 B GLU 110 n 109 GLU 110 B ALA 111 n 110 ALA 111 B ILE 112 n 111 ILE 112 B TYR 113 n 112 TYR 113 B ARG 114 n 113 ARG 114 B LEU 115 n 114 LEU 115 B GLU 116 n 115 GLU 116 B PRO 117 n 116 PRO 117 B LYS 118 n 117 LYS 118 B ASP 119 n 118 ASP 119 B LEU 120 n 119 LEU 120 B GLU 121 n 120 GLU 121 B PHE 122 n 121 PHE 122 B TYR 123 n 122 TYR 123 B TYR 124 n 123 TYR 124 B ASP 125 n 124 ASP 125 B LYS 126 n 125 LYS 126 B TRP 127 n 126 TRP 127 B GLU 128 n 127 GLU 128 B ARG 129 n 128 ARG 129 B LYS 130 n 129 LYS 130 B TRP 131 n 130 TRP 131 B TYR 132 n 131 TYR 132 B SER 133 n 132 SER 133 B ASP 134 n 133 ASP 134 B GLY 135 n 134 GLY 135 B HIS 136 n 135 HIS 136 B LYS 137 n 136 LYS 137 B ASP 138 n 137 ASP 138 B ILE 139 n 138 ILE 139 B ASN 140 n 139 ASN 140 B ASN 141 n 140 ASN 141 B PRO 142 n 141 PRO 142 B LYS 143 n 142 LYS 143 B ILE 144 n 143 ILE 144 B PRO 145 n 144 PRO 145 B VAL 146 n 145 VAL 146 B LYS 147 n 146 LYS 147 B TYR 148 n 147 TYR 148 B VAL 149 n 148 VAL 149 B MET 150 n 149 MET 150 B GLU 151 n 150 GLU 151 B HIS 152 n 151 HIS 152 B GLY 153 n 152 GLY 153 B THR 154 n 153 THR 154 B LYS 155 n 154 LYS 155 B ILE 156 n 155 ILE 156 B TYR 157 n 156 TYR 157 B author_and_software_defined_assembly PISA 2 dimeric 3070 -21 15670 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 49 A O THR 48 A N VAL 60 A N VAL 59 A O ALA 59 A O ALA 58 A N TYR 67 A N TYR 66 A O GLU 68 A O GLU 67 A N ILE 100 A N ILE 99 A O ARG 105 A O ARG 104 A N ALA 108 A N ALA 107 A O ARG 114 A O ARG 113 A N THR 154 A N THR 153 A O PHE 80 A O PHE 79 A N ILE 144 A N ILE 143 B O THR 49 B O THR 48 B N VAL 60 B N VAL 59 B O ALA 59 B O ALA 58 B N TYR 67 B N TYR 66 B O GLU 68 B O GLU 67 B N ILE 100 B N ILE 99 B O ARG 105 B O ARG 104 B N ALA 108 B N ALA 107 B O ARG 114 B O ARG 113 B N THR 154 B N THR 153 B O PHE 80 B O PHE 79 B N ILE 144 B N ILE 143 1 A ARG 54 A ARG 53 1 Y 1 A GLU 55 A GLU 54 1 Y 1 B ARG 54 B ARG 53 1 Y 1 B GLU 55 B GLU 54 1 Y 1 6.19 0.80 106.30 112.49 A A A CD1 CG CD2 TRP TRP TRP 13 13 13 N 1 -6.24 1.00 110.10 103.86 A A A CG CD1 NE1 TRP TRP TRP 13 13 13 N 1 -4.96 0.80 107.30 102.34 A A A CE2 CD2 CG TRP TRP TRP 13 13 13 N 1 -14.68 1.90 110.30 95.62 A A A N CA CB THR THR THR 46 46 46 N 1 -6.72 0.60 121.00 114.28 A A A CB CG CD2 TYR TYR TYR 94 94 94 N 1 5.86 0.80 106.30 112.16 A A A CD1 CG CD2 TRP TRP TRP 99 99 99 N 1 -5.16 0.80 107.30 102.14 A A A CE2 CD2 CG TRP TRP TRP 99 99 99 N 1 -4.74 0.60 121.00 116.26 A A A CB CG CD2 TYR TYR TYR 124 124 124 N 1 5.60 0.80 106.30 111.90 A A A CD1 CG CD2 TRP TRP TRP 127 127 127 N 1 -5.38 0.80 107.30 101.92 A A A CE2 CD2 CG TRP TRP TRP 127 127 127 N 1 -3.90 0.50 120.30 116.40 A A A NE CZ NH2 ARG ARG ARG 129 129 129 N 1 5.57 0.80 106.30 111.87 A A A CD1 CG CD2 TRP TRP TRP 131 131 131 N 1 -5.92 0.80 107.30 101.38 A A A CE2 CD2 CG TRP TRP TRP 131 131 131 N 1 6.00 0.80 106.30 112.30 B B B CD1 CG CD2 TRP TRP TRP 13 13 13 N 1 -5.21 0.80 107.30 102.09 B B B CE2 CD2 CG TRP TRP TRP 13 13 13 N 1 -13.58 1.90 110.30 96.72 B B B N CA CB THR THR THR 46 46 46 N 1 14.71 1.70 113.30 128.01 B B B CA CB CG MET MET MET 86 86 86 N 1 -4.67 0.60 121.00 116.33 B B B CB CG CD2 TYR TYR TYR 94 94 94 N 1 4.12 0.50 120.30 124.42 B B B NE CZ NH1 ARG ARG ARG 95 95 95 N 1 -5.05 0.50 120.30 115.25 B B B NE CZ NH2 ARG ARG ARG 95 95 95 N 1 5.09 0.80 106.30 111.39 B B B CD1 CG CD2 TRP TRP TRP 99 99 99 N 1 -4.88 0.80 107.30 102.42 B B B CE2 CD2 CG TRP TRP TRP 99 99 99 N 1 -4.16 0.60 121.00 116.84 B B B CB CG CD2 TYR TYR TYR 104 104 104 N 1 -3.95 0.60 121.00 117.05 B B B CB CG CD1 TYR TYR TYR 123 123 123 N 1 5.66 0.80 106.30 111.96 B B B CD1 CG CD2 TRP TRP TRP 127 127 127 N 1 -5.56 0.80 107.30 101.74 B B B CE2 CD2 CG TRP TRP TRP 127 127 127 N 1 6.12 0.80 106.30 112.42 B B B CD1 CG CD2 TRP TRP TRP 131 131 131 N 1 -5.63 0.80 107.30 101.67 B B B CE2 CD2 CG TRP TRP TRP 131 131 131 N 1 -11.30 1.60 110.90 99.60 B B B CG1 CB CG2 VAL VAL VAL 146 146 146 N 1 16.31 2.20 113.40 129.71 B B B CA CB CG GLU GLU GLU 151 151 151 N 1 A A NE2 CD2 HIS HIS 3 3 -0.076 0.011 1.373 1.297 N 1 A A NE2 CD2 HIS HIS 83 83 -0.070 0.011 1.373 1.303 N 1 A A NE2 CD2 HIS HIS 84 84 -0.082 0.011 1.373 1.291 N 1 A A NE2 CD2 HIS HIS 85 85 -0.069 0.011 1.373 1.304 N 1 A A NE2 CD2 HIS HIS 152 152 -0.076 0.011 1.373 1.297 N 1 B B NE2 CD2 HIS HIS 83 83 -0.072 0.011 1.373 1.301 N 1 B B NE2 CD2 HIS HIS 136 136 -0.070 0.011 1.373 1.303 N 1 B B CA CB VAL VAL 149 149 0.130 0.021 1.543 1.673 N 1 B B NE2 CD2 HIS HIS 152 152 -0.071 0.011 1.373 1.302 N 1 A HIS 3 178.43 134.30 1 A THR 82 -119.94 -84.31 1 A HIS 136 57.12 17.56 1 A ASN 141 29.98 73.54 1 B ASN 57 -100.53 -165.74 1 B THR 82 -131.63 -68.68 0.1840000 0.1840000 2.4 6.0 15332 1 2.0 2.4 6.0 79 2623 0 0 2544 0.023 3.62 model building X-PLOR refinement X-PLOR phasing X-PLOR THE CRYSTAL STRUCTURE OF PVUII ENDONUCLEASE REVEALS EXTENSIVE STRUCTURAL HOMOLOGIES TO ECORV 1 N N 1 N N 2 N N 2 N N A PRO 4 A PRO 3 HELX_P A LYS 25 A LYS 24 1 H1 22 A GLY 36 A GLY 35 HELX_P A THR 46 A THR 45 1 H2 11 A PRO 88 A PRO 87 HELX_P A ARG 95 A ARG 94 1 H3 8 A PRO 117 A PRO 116 HELX_P A SER 133 A SER 132 1 H4 17 A VAL 146 A VAL 145 HELX_P A HIS 152 A HIS 151 1 H5 7 B ASP 5 B ASP 4 HELX_P B LYS 25 B LYS 24 1 H6 21 B GLY 36 B GLY 35 HELX_P B THR 46 B THR 45 1 H7 11 B PRO 88 B PRO 87 HELX_P B ARG 95 B ARG 94 1 H8 8 B PRO 117 B PRO 116 HELX_P B SER 133 B SER 132 1 H9 17 B VAL 146 B VAL 145 HELX_P B HIS 152 B HIS 151 1 H10 7 TYPE II RESTRICTION ENDONUCLEASE TYPE II RESTRICTION ENDONUCLEASE given 0.732901 -0.680335 -0.000615 -0.680161 -0.732733 0.021998 -0.015417 -0.015704 -0.999758 40.79600 102.79400 36.96100 T2P2_PROVU UNP 1 2 P23657 2 157 1PVU 2 157 P23657 A 1 1 156 2 157 1PVU 2 157 P23657 B 1 1 156 6 2 6 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A THR 49 A THR 48 A VAL 50 A VAL 49 A ALA 59 A ALA 58 A VAL 60 A VAL 59 A GLU 66 A GLU 65 A ASN 73 A ASN 72 A TRP 99 A TRP 98 A ARG 105 A ARG 104 A ALA 108 A ALA 107 A LEU 115 A LEU 114 A THR 154 A THR 153 A LYS 155 A LYS 154 A GLY 79 A GLY 78 A PHE 80 A PHE 79 A ILE 144 A ILE 143 A PRO 145 A PRO 144 B THR 49 B THR 48 B VAL 50 B VAL 49 B ALA 59 B ALA 58 B VAL 60 B VAL 59 B GLU 66 B GLU 65 B ASN 73 B ASN 72 B TRP 99 B TRP 98 B ARG 105 B ARG 104 B ALA 108 B ALA 107 B LEU 115 B LEU 114 B THR 154 B THR 153 B LYS 155 B LYS 154 B GLY 79 B GLY 78 B PHE 80 B PHE 79 B ILE 144 B ILE 143 B PRO 145 B PRO 144 18 P 21 21 2