0.017065
0.000000
0.000000
0.000000
0.015848
0.000000
0.000000
0.000000
0.013755
0.00000
0.00000
0.00000
Yang, Z.
Horton, J.R.
Zhou, L.
Zhang, X.J.
Dong, A.
Zhang, X.
Schlagman, S.L.
Kossykh, V.
Hattman, S.
Cheng, X.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.0
90.0
90.0
58.6
63.1
72.7
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C14 H20 N6 O5 S
384.411
n
S-ADENOSYL-L-HOMOCYSTEINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
C
N
294
N
S
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
C
N
299
S
C
N
300
N
O
N
301
S
C
N
302
N
O
N
303
R
C
N
304
N
O
N
305
R
C
Y
306
N
N
Y
307
N
C
Y
308
N
N
Y
309
N
C
Y
310
N
C
N
311
N
N
Y
312
N
N
Y
313
N
C
Y
314
N
N
Y
315
N
C
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
R
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
N
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
sing
Y
311
N
sing
Y
312
N
doub
N
313
N
sing
Y
314
N
sing
Y
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
doub
N
319
N
sing
N
320
N
sing
Y
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
doub
Y
370
N
sing
Y
371
N
sing
N
372
N
sing
Y
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
sing
N
396
N
sing
Y
397
N
doub
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
10
849
855
10.1038/nsb973
12937411
Structure of the bacteriophage T4 DNA adenine methyltransferase
2003
10.2210/pdb1q0s/pdb
pdb_00001q0s
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
CCD
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.1
1.0
X26C
NSLS
1.1
SYNCHROTRON
NSLS BEAMLINE X26C
30463.805
DNA adenine methylase
2.1.1.72
1
man
polymer
384.411
S-ADENOSYL-L-HOMOCYSTEINE
1
syn
non-polymer
18.015
water
52
nat
water
Deoxyadenosyl-methyltransferase, M.EcoT4Dam
2.1.1.72
no
no
MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLS
KTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDV
KILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYV
FNIYHSKEKNGTDEVYIFN
MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLS
KTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDV
KILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYV
FNIYHSKEKNGTDEVYIFN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
T4-like viruses
Enterobacteria phage T4 sensu lato
Escherichia
sample
DAM
10665
Enterobacteria phage T4
562
Escherichia coli
plasmid
PJW2
1
2.21
44.23
VAPOR DIFFUSION, HANGING DROP
6.0
Ammonium sulfate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K
289
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-09-23
1
1
2008-04-29
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Ternary Structure of T4DAM with AdoHcy and DNA
RCSB
Y
RCSB
2003-07-17
REL
SAH
S-ADENOSYL-L-HOMOCYSTEINE
HOH
water
SAH
300
2
SAH
SAH
300
A
TIP
1
3
HOH
HOH
301
A
TIP
2
3
HOH
HOH
302
A
TIP
3
3
HOH
HOH
303
A
TIP
4
3
HOH
HOH
304
A
TIP
5
3
HOH
HOH
305
A
TIP
6
3
HOH
HOH
306
A
TIP
7
3
HOH
HOH
307
A
TIP
8
3
HOH
HOH
308
A
TIP
9
3
HOH
HOH
309
A
TIP
10
3
HOH
HOH
310
A
TIP
11
3
HOH
HOH
311
A
TIP
12
3
HOH
HOH
312
A
TIP
13
3
HOH
HOH
313
A
TIP
14
3
HOH
HOH
314
A
TIP
15
3
HOH
HOH
315
A
TIP
16
3
HOH
HOH
316
A
TIP
17
3
HOH
HOH
317
A
TIP
18
3
HOH
HOH
318
A
TIP
19
3
HOH
HOH
319
A
TIP
20
3
HOH
HOH
320
A
TIP
21
3
HOH
HOH
321
A
TIP
22
3
HOH
HOH
322
A
TIP
23
3
HOH
HOH
323
A
TIP
24
3
HOH
HOH
324
A
TIP
25
3
HOH
HOH
325
A
TIP
26
3
HOH
HOH
326
A
TIP
27
3
HOH
HOH
327
A
TIP
28
3
HOH
HOH
328
A
TIP
29
3
HOH
HOH
329
A
TIP
30
3
HOH
HOH
330
A
TIP
31
3
HOH
HOH
331
A
TIP
32
3
HOH
HOH
332
A
TIP
33
3
HOH
HOH
333
A
TIP
34
3
HOH
HOH
334
A
TIP
35
3
HOH
HOH
335
A
TIP
36
3
HOH
HOH
336
A
TIP
37
3
HOH
HOH
337
A
TIP
38
3
HOH
HOH
338
A
TIP
39
3
HOH
HOH
339
A
TIP
40
3
HOH
HOH
340
A
TIP
41
3
HOH
HOH
341
A
TIP
42
3
HOH
HOH
342
A
TIP
43
3
HOH
HOH
343
A
TIP
44
3
HOH
HOH
344
A
TIP
45
3
HOH
HOH
345
A
TIP
46
3
HOH
HOH
346
A
TIP
47
3
HOH
HOH
347
A
TIP
48
3
HOH
HOH
348
A
TIP
49
3
HOH
HOH
349
A
TIP
50
3
HOH
HOH
350
A
TIP
51
3
HOH
HOH
351
A
TIP
52
3
HOH
HOH
352
A
MET
1
n
1
MET
1
A
LEU
2
n
2
LEU
2
A
GLY
3
n
3
GLY
3
A
ALA
4
n
4
ALA
4
A
ILE
5
n
5
ILE
5
A
ALA
6
n
6
ALA
6
A
TYR
7
n
7
TYR
7
A
THR
8
n
8
THR
8
A
GLY
9
n
9
GLY
9
A
ASN
10
n
10
ASN
10
A
LYS
11
n
11
LYS
11
A
GLN
12
n
12
GLN
12
A
SER
13
n
13
SER
13
A
LEU
14
n
14
LEU
14
A
LEU
15
n
15
LEU
15
A
PRO
16
n
16
PRO
16
A
GLU
17
n
17
GLU
17
A
LEU
18
n
18
LEU
18
A
LYS
19
n
19
LYS
19
A
SER
20
n
20
SER
20
A
HIS
21
n
21
HIS
21
A
PHE
22
n
22
PHE
22
A
PRO
23
n
23
PRO
23
A
LYS
24
n
24
LYS
24
A
TYR
25
n
25
TYR
25
A
ASN
26
n
26
ASN
26
A
ARG
27
n
27
ARG
27
A
PHE
28
n
28
PHE
28
A
VAL
29
n
29
VAL
29
A
ASP
30
n
30
ASP
30
A
LEU
31
n
31
LEU
31
A
PHE
32
n
32
PHE
32
A
CYS
33
n
33
CYS
33
A
GLY
34
n
34
GLY
34
A
GLY
35
n
35
GLY
35
A
LEU
36
n
36
LEU
36
A
SER
37
n
37
SER
37
A
VAL
38
n
38
VAL
38
A
SER
39
n
39
SER
39
A
LEU
40
n
40
LEU
40
A
ASN
41
n
41
ASN
41
A
VAL
42
n
42
VAL
42
A
ASN
43
n
43
ASN
43
A
GLY
44
n
44
GLY
44
A
CPR
45
n
45
PRO
45
A
VAL
46
n
46
VAL
46
A
LEU
47
n
47
LEU
47
A
ALA
48
n
48
ALA
48
A
ASN
49
n
49
ASN
49
A
ASP
50
n
50
ASP
50
A
ILE
51
n
51
ILE
51
A
GLN
52
n
52
GLN
52
A
GLU
53
n
53
GLU
53
A
PRO
54
n
54
PRO
54
A
ILE
55
n
55
ILE
55
A
ILE
56
n
56
ILE
56
A
GLU
57
n
57
GLU
57
A
MET
58
n
58
MET
58
A
TYR
59
n
59
TYR
59
A
LYS
60
n
60
LYS
60
A
ARG
61
n
61
ARG
61
A
LEU
62
n
62
LEU
62
A
ILE
63
n
63
ILE
63
A
ASN
64
n
64
ASN
64
A
VAL
65
n
65
VAL
65
A
SER
66
n
66
SER
66
A
TRP
67
n
67
TRP
67
A
ASP
68
n
68
ASP
68
A
ASP
69
n
69
ASP
69
A
VAL
70
n
70
VAL
70
A
LEU
71
n
71
LEU
71
A
LYS
72
n
72
LYS
72
A
VAL
73
n
73
VAL
73
A
ILE
74
n
74
ILE
74
A
LYS
75
n
75
LYS
75
A
GLN
76
n
76
GLN
76
A
TYR
77
n
77
TYR
77
A
LYS
78
n
78
LYS
78
A
LEU
79
n
79
LEU
79
A
SER
80
n
80
SER
80
A
LYS
81
n
81
LYS
81
A
THR
82
n
82
THR
82
A
SER
83
n
83
SER
83
A
LYS
84
n
84
LYS
84
A
GLU
85
n
85
GLU
85
A
GLU
86
n
86
GLU
86
A
PHE
87
n
87
PHE
87
A
LEU
88
n
88
LEU
88
A
LYS
89
n
89
LYS
89
A
LEU
90
n
90
LEU
90
A
ARG
91
n
91
ARG
91
A
GLU
92
n
92
GLU
92
A
ASP
93
n
93
ASP
93
A
TYR
94
n
94
TYR
94
A
ASN
95
n
95
ASN
95
A
LYS
96
n
96
LYS
96
A
THR
97
n
97
THR
97
A
ARG
98
n
98
ARG
98
A
ASP
99
n
99
ASP
99
A
PRO
100
n
100
PRO
100
A
LEU
101
n
101
LEU
101
A
LEU
102
n
102
LEU
102
A
LEU
103
n
103
LEU
103
A
TYR
104
n
104
TYR
104
A
VAL
105
n
105
VAL
105
A
LEU
106
n
106
LEU
106
A
HIS
107
n
107
HIS
107
A
PHE
108
n
108
PHE
108
A
HIS
109
n
109
HIS
109
A
GLY
110
n
110
GLY
110
A
PHE
111
n
111
PHE
111
A
SER
112
n
112
SER
112
A
ASN
113
n
113
ASN
113
A
MET
114
n
114
MET
114
A
ILE
115
n
115
ILE
115
A
ARG
116
n
116
ARG
116
A
ILE
117
n
117
ILE
117
A
ASN
118
n
118
ASN
118
A
ASP
119
n
119
ASP
119
A
LYS
120
n
120
LYS
120
A
GLY
121
n
121
GLY
121
A
ASN
122
n
122
ASN
122
A
PHE
123
n
123
PHE
123
A
THR
124
n
124
THR
124
A
THR
125
n
125
THR
125
A
PRO
126
n
126
PRO
126
A
PHE
127
n
127
PHE
127
A
GLY
128
n
128
GLY
128
A
LYS
129
n
129
LYS
129
A
ARG
130
n
130
ARG
130
A
THR
131
n
131
THR
131
A
ILE
132
n
132
ILE
132
A
ASN
133
n
133
ASN
133
A
LYS
134
n
134
LYS
134
A
ASN
135
n
135
ASN
135
A
SER
136
n
136
SER
136
A
GLU
137
n
137
GLU
137
A
LYS
138
n
138
LYS
138
A
GLN
139
n
139
GLN
139
A
TYR
140
n
140
TYR
140
A
ASN
141
n
141
ASN
141
A
HIS
142
n
142
HIS
142
A
PHE
143
n
143
PHE
143
A
LYS
144
n
144
LYS
144
A
GLN
145
n
145
GLN
145
A
ASN
146
n
146
ASN
146
A
CYS
147
n
147
CYS
147
A
ASP
148
n
148
ASP
148
A
LYS
149
n
149
LYS
149
A
ILE
150
n
150
ILE
150
A
ILE
151
n
151
ILE
151
A
PHE
152
n
152
PHE
152
A
SER
153
n
153
SER
153
A
SER
154
n
154
SER
154
A
LEU
155
n
155
LEU
155
A
HIS
156
n
156
HIS
156
A
PHE
157
n
157
PHE
157
A
LYS
158
n
158
LYS
158
A
ASP
159
n
159
ASP
159
A
VAL
160
n
160
VAL
160
A
LYS
161
n
161
LYS
161
A
ILE
162
n
162
ILE
162
A
LEU
163
n
163
LEU
163
A
ASP
164
n
164
ASP
164
A
GLY
165
n
165
GLY
165
A
ASP
166
n
166
ASP
166
A
PHE
167
n
167
PHE
167
A
VAL
168
n
168
VAL
168
A
TYR
169
n
169
TYR
169
A
VAL
170
n
170
VAL
170
A
ASP
171
n
171
ASP
171
A
PRO
172
n
172
PRO
172
A
PRO
173
n
173
PRO
173
A
TYR
174
n
174
TYR
174
A
LEU
175
n
175
LEU
175
A
ILE
176
n
176
ILE
176
A
THR
177
n
177
THR
177
A
VAL
178
n
178
VAL
178
A
ALA
179
n
179
ALA
179
A
ASP
180
n
180
ASP
180
A
TYR
181
n
181
TYR
181
A
ASN
182
n
182
ASN
182
A
LYS
183
n
183
LYS
183
A
PHE
184
n
184
PHE
184
A
TRP
185
n
185
TRP
185
A
SER
186
n
186
SER
186
A
GLU
187
n
187
GLU
187
A
ASP
188
n
188
ASP
188
A
GLU
189
n
189
GLU
189
A
GLU
190
n
190
GLU
190
A
LYS
191
n
191
LYS
191
A
ASP
192
n
192
ASP
192
A
LEU
193
n
193
LEU
193
A
LEU
194
n
194
LEU
194
A
ASN
195
n
195
ASN
195
A
LEU
196
n
196
LEU
196
A
LEU
197
n
197
LEU
197
A
ASP
198
n
198
ASP
198
A
SER
199
n
199
SER
199
A
LEU
200
n
200
LEU
200
A
ASN
201
n
201
ASN
201
A
ASP
202
n
202
ASP
202
A
ARG
203
n
203
ARG
203
A
GLY
204
n
204
GLY
204
A
ILE
205
n
205
ILE
205
A
LYS
206
n
206
LYS
206
A
PHE
207
n
207
PHE
207
A
GLY
208
n
208
GLY
208
A
GLN
209
n
209
GLN
209
A
SER
210
n
210
SER
210
A
ASN
211
n
211
ASN
211
A
VAL
212
n
212
VAL
212
A
LEU
213
n
213
LEU
213
A
GLU
214
n
214
GLU
214
A
HIS
215
n
215
HIS
215
A
HIS
216
n
216
HIS
216
A
GLY
217
n
217
GLY
217
A
LYS
218
n
218
LYS
218
A
GLU
219
n
219
GLU
219
A
ASN
220
n
220
ASN
220
A
THR
221
n
221
THR
221
A
LEU
222
n
222
LEU
222
A
LEU
223
n
223
LEU
223
A
LYS
224
n
224
LYS
224
A
GLU
225
n
225
GLU
225
A
TRP
226
n
226
TRP
226
A
SER
227
n
227
SER
227
A
LYS
228
n
228
LYS
228
A
LYS
229
n
229
LYS
229
A
TYR
230
n
230
TYR
230
A
ASN
231
n
231
ASN
231
A
VAL
232
n
232
VAL
232
A
LYS
233
n
233
LYS
233
A
HIS
234
n
234
HIS
234
A
LEU
235
n
235
LEU
235
A
n
236
236
A
n
237
237
A
n
238
238
A
n
239
239
A
n
240
240
A
n
241
241
A
n
242
242
A
n
243
243
A
n
244
244
A
n
245
245
A
n
246
246
A
n
247
247
A
n
248
248
A
n
249
249
A
n
250
250
A
n
251
251
A
n
252
252
A
n
253
253
A
GLU
254
n
254
GLU
254
A
VAL
255
n
255
VAL
255
A
TYR
256
n
256
TYR
256
A
ILE
257
n
257
ILE
257
A
PHE
258
n
258
PHE
258
A
ASN
259
n
259
ASN
259
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
151
A
O
ILE
151
A
N
VAL
46
A
N
VAL
46
A
O
ASN
49
A
O
ASN
49
A
N
ASP
30
A
N
ASP
30
A
N
VAL
29
A
N
VAL
29
A
O
PHE
167
A
O
PHE
167
A
N
VAL
170
A
N
VAL
170
A
O
GLY
208
A
O
GLY
208
A
N
GLN
209
A
N
GLN
209
A
O
ILE
257
A
O
ILE
257
A
O
TYR
256
A
O
TYR
256
A
N
LYS
233
A
N
LYS
233
1
A
ASN
236
A
ASN
236
1
Y
1
A
LYS
237
A
LYS
237
1
Y
1
A
LYS
238
A
LYS
238
1
Y
1
A
TYR
239
A
TYR
239
1
Y
1
A
VAL
240
A
VAL
240
1
Y
1
A
PHE
241
A
PHE
241
1
Y
1
A
ASN
242
A
ASN
242
1
Y
1
A
ILE
243
A
ILE
243
1
Y
1
A
TYR
244
A
TYR
244
1
Y
1
A
HIS
245
A
HIS
245
1
Y
1
A
SER
246
A
SER
246
1
Y
1
A
LYS
247
A
LYS
247
1
Y
1
A
GLU
248
A
GLU
248
1
Y
1
A
LYS
249
A
LYS
249
1
Y
1
A
ASN
250
A
ASN
250
1
Y
1
A
GLY
251
A
GLY
251
1
Y
1
A
THR
252
A
THR
252
1
Y
1
A
ASP
253
A
ASP
253
1
Y
1
A
SER
80
-151.53
-159.94
1
A
ASN
133
-140.28
-149.55
1
A
ALA
179
-174.72
144.23
1
A
TYR
181
-69.52
3.51
1
A
ASN
211
-174.05
-176.15
1
A
GLU
214
-170.63
88.02
1
A
HIS
216
49.51
152.98
CNS_TOPPAR:protein_rep.param
CNS_TOPPAR:water_rep.param
sam.par
CNS_TOPPAR:dna-rna_rep.param
11.885
0.000
0.000
-4.362
0.000
-7.524
0.266
0.222
2.3
18.0
604
12140
12140
4.9
97.7
RANDOM
1
0.0
MOLECULAR REPLACEMENT
Engh & Huber
2.3
18.0
52
2077
26
0
1999
1.3
0.007
22.9
0.81
2.3
50.0
1Q0S
13015
12701
0
0
0.056
1
16.5
4.4
97.6
0.229
2.35
2.37
3.9
99.6
data collection
HKL-2000
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
1.0
data reduction
HKL-2000
Binary Structure of T4DAM with AdoHcy
1
N
N
2
N
N
3
N
N
A
LEU
14
A
LEU
14
HELX_P
A
SER
20
A
SER
20
1
1
7
A
VAL
38
A
VAL
38
HELX_P
A
VAL
42
A
VAL
42
5
2
5
A
GLN
52
A
GLN
52
HELX_P
A
ILE
63
A
ILE
63
1
3
12
A
SER
66
A
SER
66
HELX_P
A
TYR
77
A
TYR
77
1
4
12
A
SER
83
A
SER
83
HELX_P
A
ARG
98
A
ARG
98
1
5
16
A
ASP
99
A
ASP
99
HELX_P
A
GLY
110
A
GLY
110
1
6
12
A
PHE
111
A
PHE
111
HELX_P
A
MET
114
A
MET
114
5
7
4
A
ASN
133
A
ASN
133
HELX_P
A
CYS
147
A
CYS
147
1
8
15
A
HIS
156
A
HIS
156
HELX_P
A
VAL
160
A
VAL
160
5
9
5
A
ALA
179
A
ALA
179
HELX_P
A
TRP
185
A
TRP
185
5
10
7
A
SER
186
A
SER
186
HELX_P
A
ARG
203
A
ARG
203
1
11
18
A
THR
221
A
THR
221
HELX_P
A
LYS
228
A
LYS
228
1
12
8
TRANSFERASE
T4DAM, Methyltransferase, TRANSFERASE
A
GLY
44
A
GLY
44
1
A
PRO
45
A
PRO
45
-0.44
DMA_BPT4
UNP
1
1
P04392
MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLS
KTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDV
KILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYV
FNIYHSKEKNGTDEVYIFN
1
259
1Q0S
1
259
P04392
A
1
1
259
7
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
ILE
150
A
ILE
150
A
SER
153
A
SER
153
A
VAL
46
A
VAL
46
A
ASN
49
A
ASN
49
A
ARG
27
A
ARG
27
A
ASP
30
A
ASP
30
A
ASP
166
A
ASP
166
A
VAL
170
A
VAL
170
A
PHE
207
A
PHE
207
A
ASN
211
A
ASN
211
A
VAL
255
A
VAL
255
A
PHE
258
A
PHE
258
A
ASN
231
A
ASN
231
A
LYS
233
A
LYS
233
BINDING SITE FOR RESIDUE SAH A 300
A
SAH
300
Software
19
A
TYR
7
A
TYR
7
19
1_555
A
ASN
10
A
ASN
10
19
1_555
A
LYS
11
A
LYS
11
19
1_555
A
PHE
32
A
PHE
32
19
1_555
A
CYS
33
A
CYS
33
19
1_555
A
GLY
34
A
GLY
34
19
1_555
A
GLY
35
A
GLY
35
19
1_555
A
SER
37
A
SER
37
19
1_555
A
ASP
50
A
ASP
50
19
1_555
A
ILE
51
A
ILE
51
19
1_555
A
GLN
52
A
GLN
52
19
1_555
A
HIS
156
A
HIS
156
19
1_555
A
PHE
157
A
PHE
157
19
1_555
A
ASP
171
A
ASP
171
19
1_555
A
TYR
181
A
TYR
181
19
1_555
A
PHE
184
A
PHE
184
19
1_555
A
HOH
314
C
HOH
19
1_555
A
HOH
318
C
HOH
19
1_555
A
HOH
322
C
HOH
19
1_555
19
P 21 21 21