0.025189 0.000000 0.006374 0.000000 0.009116 0.000000 0.000000 0.000000 0.014015 0.00000 0.00000 0.00000 Yang, Z. Horton, J.R. Zhou, L. Zhang, X.J. Dong, A. Zhang, X. Schlagman, S.L. Kossykh, V. Hattman, S. Cheng, X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.0 104.2 90.0 39.7 109.7 73.6 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking I -1 126.904 IODIDE ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C14 H20 N6 O5 S 384.411 n S-ADENOSYL-L-HOMOCYSTEINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 S C N 306 N C N 307 N C N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N I N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N C N 330 N C N 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C N 351 N C N 352 N C N 353 N C N 354 N N N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 N C N 376 N C N 377 N S N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C Y 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N N N 415 S C N 416 N C N 417 N O N 418 N C N 419 N C N 420 N C N 421 N O N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N C N 435 N S N 436 N C N 437 N O N 438 N O N 439 N C N 440 S C N 441 N O N 442 S C N 443 N O N 444 R C N 445 N O N 446 R C Y 447 N N Y 448 N C Y 449 N N Y 450 N C Y 451 N C N 452 N N Y 453 N N Y 454 N C Y 455 N N Y 456 N C N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N N N 478 S C N 479 N C N 480 N O N 481 N C N 482 N O N 483 N O N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 R C N 496 N O N 497 N C N 498 N O N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N N N 509 S C N 510 N C N 511 N O N 512 N C Y 513 N C Y 514 N C Y 515 N C Y 516 N N Y 517 N C Y 518 N C Y 519 N C Y 520 N C Y 521 N C N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N N N 536 S C N 537 N C N 538 N O N 539 N C Y 540 N C Y 541 N C Y 542 N C Y 543 N C Y 544 N C Y 545 N C N 546 N O N 547 N O N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N H N 559 N N N 560 S C N 561 N C N 562 N O N 563 N C N 564 N C N 565 N C N 566 N O N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N doub N 400 N sing Y 401 N doub N 402 N sing Y 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N doub N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing Y 457 N sing Y 458 N sing Y 459 N doub N 460 N sing Y 461 N sing Y 462 N sing Y 463 N doub N 464 N sing Y 465 N doub N 466 N sing N 467 N sing Y 468 N sing Y 469 N doub N 470 N sing Y 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N doub N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N doub N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N doub N 508 N sing N 509 N sing N 510 N sing N 511 N sing Y 512 N doub Y 513 N sing Y 514 N sing N 515 N sing Y 516 N doub Y 517 N sing Y 518 N sing N 519 N sing Y 520 N sing Y 521 N doub N 522 N sing Y 523 N doub N 524 N sing Y 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N doub N 536 N sing N 537 N sing N 538 N sing N 539 N sing Y 540 N doub Y 541 N sing Y 542 N sing N 543 N sing Y 544 N doub N 545 N sing Y 546 N doub N 547 N sing Y 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N doub N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 10 849 855 10.1038/nsb973 12937411 Structure of the bacteriophage T4 DNA adenine methyltransferase 2003 10.2210/pdb1q0t/pdb pdb_00001q0t 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 CCD ADSC QUANTUM 4 MAD M x-ray 1 1.1 1.0 X26C NSLS 1.1 SYNCHROTRON NSLS BEAMLINE X26C Palindromic 12 Base Pair DNA Duplex 3662.404 5'-D(*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*T)-3' 2 syn polymer 30463.805 DNA adenine methylase 2.1.1.72 2 man polymer 126.904 IODIDE ION 2 syn non-polymer 384.411 S-ADENOSYL-L-HOMOCYSTEINE 2 syn non-polymer Deoxyadenosyl-methyltransferase, M.EcoT4Dam 2.1.1.72 no no (DA)(DC)(DA)(DG)(DG)(DA)(DT)(DC)(DC)(DT)(DG)(DT) ACAGGATCCTGT C,D polydeoxyribonucleotide no no MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLS KTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDV KILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYV FNIYHSKEKNGTDEVYIFN MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLS KTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDV KILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYV FNIYHSKEKNGTDEVYIFN A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n T4-like viruses Enterobacteria phage T4 sensu lato Escherichia sample DAM 10665 Enterobacteria phage T4 562 Escherichia coli plasmid PJW2 1 2.27 45.73 VAPOR DIFFUSION, HANGING DROP 7.5 PEG 8000, ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K 289 PEG 8000 1 ammonium sulfate 1 H2O 1 PEG 8000 2 ammonium sulfate 2 H2O 2 -0.856 1 20 C 402 D 433 8.468 C_DA402:DT433_D 1 -11.005 0.062 0.024 -0.126 -4.921 1 19 C 403 D 432 -2.831 C_DC403:DG432_D 2 -8.141 -0.020 0.525 -0.180 5.750 1 20 C 404 D 431 -1.579 C_DA404:DT431_D 3 -4.148 0.057 0.454 -0.484 17.439 1 19 C 405 D 430 0.823 C_DG405:DC430_D 4 1.229 -0.133 0.577 -0.128 12.072 1 19 C 406 D 429 2.452 C_DG406:DC429_D 5 -10.554 0.017 0.104 -0.121 -0.086 1 20 C 407 D 428 5.328 C_DA407:DT428_D 6 -9.392 0.029 0.100 -0.199 -5.785 1 20 C 408 D 427 -5.808 C_DT408:DA427_D 7 -18.511 -0.017 -0.021 -0.151 -18.147 1 19 C 409 D 426 6.262 C_DC409:DG426_D 8 -19.950 0.117 0.198 -0.107 -29.384 1 19 C 410 D 425 -0.381 C_DC410:DG425_D 9 2.243 0.013 0.432 0.091 -8.600 1 20 C 411 D 424 -1.147 C_DT411:DA424_D 10 -4.719 -0.101 0.237 -0.142 2.949 1 19 C 412 D 423 -2.922 C_DG412:DC423_D 11 -5.325 0.264 0.318 -0.257 -0.918 1 20 C 413 D 422 -1.448 C_DT413:DA422_D 12 -6.911 0.064 0.250 -0.127 3.411 33.667 C C 402 403 0.792 D D 433 432 3.383 0.457 -0.511 -0.672 CC_DA402DC403:DG432DT433_DD 1 -4.214 7.294 33.407 -1.238 0.166 3.002 42.821 C C 403 404 -4.735 D D 432 431 3.058 -3.451 0.372 0.826 CC_DC403DA404:DT431DG432_DD 2 2.693 -3.695 42.607 1.451 -0.260 2.949 26.313 C C 404 405 7.081 D D 431 430 2.999 3.215 0.497 -0.056 CC_DA404DG405:DC430DT431_DD 3 -1.032 2.272 26.099 -0.911 -1.344 3.463 37.382 C C 405 406 3.301 D D 430 429 3.505 2.114 -0.322 -0.245 CC_DG405DG406:DC429DC430_DD 4 2.182 -3.407 37.262 -0.679 0.808 3.399 40.361 C C 406 407 -1.584 D D 429 428 3.404 -1.092 0.190 -0.277 CC_DG406DA407:DT428DC429_DD 5 -1.805 2.617 40.308 -0.274 -0.487 3.358 32.226 C C 407 408 -2.605 D D 428 427 3.330 -1.445 -0.428 -0.825 CC_DA407DT408:DA427DT428_DD 6 0.383 -0.690 32.192 -1.223 0.841 3.435 42.606 C C 408 409 -11.306 D D 427 426 3.482 -8.168 0.333 -0.029 CC_DT408DC409:DG426DA427_DD 7 1.098 -1.519 41.838 0.840 -0.340 3.614 38.676 C C 409 410 3.155 D D 426 425 3.604 2.088 0.235 0.239 CC_DC409DC410:DG425DG426_DD 8 0.534 -0.807 38.618 0.077 -0.282 2.876 26.466 C C 410 411 1.467 D D 425 424 2.921 0.671 -0.544 0.269 CC_DC410DT411:DA424DG425_DD 9 2.092 -4.575 26.376 0.429 1.681 3.071 37.431 C C 411 412 -1.757 D D 424 423 3.074 -1.127 0.602 0.922 CC_DT411DG412:DC423DA424_DD 10 1.890 -2.947 37.369 1.576 -0.705 3.286 31.133 C C 412 413 4.188 D D 423 422 3.270 2.243 0.912 -0.678 CC_DG412DT413:DA422DC423_DD 11 3.017 -5.635 30.911 -1.693 -1.121 ndb_struct_na_base_pair pdbx_struct_assembly pdbx_struct_assembly_gen chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Version format compliance Derived calculations Data collection Database references Derived calculations 1 0 2003-09-23 1 1 2008-04-29 1 2 2011-07-13 1 3 2020-07-22 1 4 2024-02-14 _ndb_struct_na_base_pair.buckle _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Binary Structure of T4DAM with AdoHcy RCSB Y RCSB 2003-07-17 REL IOD IODIDE ION SAH S-ADENOSYL-L-HOMOCYSTEINE I1 2 3 IOD IOD 2 C I1 1 3 IOD IOD 1 D SAH 300 4 SAH SAH 300 A SAH 301 4 SAH SAH 301 B ADE 402 n 1 DA 402 C CYT 403 n 2 DC 403 C ADE 404 n 3 DA 404 C GUA 405 n 4 DG 405 C GUA 406 n 5 DG 406 C ADE 407 n 6 DA 407 C THY 408 n 7 DT 408 C CYT 409 n 8 DC 409 C CYT 410 n 9 DC 410 C THY 411 n 10 DT 411 C GUA 412 n 11 DG 412 C THY 413 n 12 DT 413 C ADE 422 n 1 DA 422 D CYT 423 n 2 DC 423 D ADE 424 n 3 DA 424 D GUA 425 n 4 DG 425 D GUA 426 n 5 DG 426 D ADE 427 n 6 DA 427 D THY 428 n 7 DT 428 D CYT 429 n 8 DC 429 D CYT 430 n 9 DC 430 D THY 431 n 10 DT 431 D GUA 432 n 11 DG 432 D THY 433 n 12 DT 433 D MET 1 n 1 MET 1 A LEU 2 n 2 LEU 2 A GLY 3 n 3 GLY 3 A ALA 4 n 4 ALA 4 A ILE 5 n 5 ILE 5 A ALA 6 n 6 ALA 6 A TYR 7 n 7 TYR 7 A THR 8 n 8 THR 8 A GLY 9 n 9 GLY 9 A ASN 10 n 10 ASN 10 A LYS 11 n 11 LYS 11 A GLN 12 n 12 GLN 12 A SER 13 n 13 SER 13 A LEU 14 n 14 LEU 14 A LEU 15 n 15 LEU 15 A PRO 16 n 16 PRO 16 A GLU 17 n 17 GLU 17 A LEU 18 n 18 LEU 18 A LYS 19 n 19 LYS 19 A SER 20 n 20 SER 20 A HIS 21 n 21 HIS 21 A PHE 22 n 22 PHE 22 A PRO 23 n 23 PRO 23 A LYS 24 n 24 LYS 24 A TYR 25 n 25 TYR 25 A ASN 26 n 26 ASN 26 A ARG 27 n 27 ARG 27 A PHE 28 n 28 PHE 28 A VAL 29 n 29 VAL 29 A ASP 30 n 30 ASP 30 A LEU 31 n 31 LEU 31 A PHE 32 n 32 PHE 32 A CYS 33 n 33 CYS 33 A GLY 34 n 34 GLY 34 A GLY 35 n 35 GLY 35 A LEU 36 n 36 LEU 36 A SER 37 n 37 SER 37 A VAL 38 n 38 VAL 38 A SER 39 n 39 SER 39 A LEU 40 n 40 LEU 40 A ASN 41 n 41 ASN 41 A VAL 42 n 42 VAL 42 A ASN 43 n 43 ASN 43 A GLY 44 n 44 GLY 44 A CPR 45 n 45 PRO 45 A VAL 46 n 46 VAL 46 A LEU 47 n 47 LEU 47 A ALA 48 n 48 ALA 48 A ASN 49 n 49 ASN 49 A ASP 50 n 50 ASP 50 A ILE 51 n 51 ILE 51 A GLN 52 n 52 GLN 52 A GLU 53 n 53 GLU 53 A PRO 54 n 54 PRO 54 A ILE 55 n 55 ILE 55 A ILE 56 n 56 ILE 56 A GLU 57 n 57 GLU 57 A MET 58 n 58 MET 58 A TYR 59 n 59 TYR 59 A LYS 60 n 60 LYS 60 A ARG 61 n 61 ARG 61 A LEU 62 n 62 LEU 62 A ILE 63 n 63 ILE 63 A ASN 64 n 64 ASN 64 A VAL 65 n 65 VAL 65 A SER 66 n 66 SER 66 A TRP 67 n 67 TRP 67 A ASP 68 n 68 ASP 68 A ASP 69 n 69 ASP 69 A VAL 70 n 70 VAL 70 A LEU 71 n 71 LEU 71 A LYS 72 n 72 LYS 72 A VAL 73 n 73 VAL 73 A ILE 74 n 74 ILE 74 A LYS 75 n 75 LYS 75 A GLN 76 n 76 GLN 76 A TYR 77 n 77 TYR 77 A LYS 78 n 78 LYS 78 A LEU 79 n 79 LEU 79 A SER 80 n 80 SER 80 A LYS 81 n 81 LYS 81 A THR 82 n 82 THR 82 A SER 83 n 83 SER 83 A LYS 84 n 84 LYS 84 A GLU 85 n 85 GLU 85 A GLU 86 n 86 GLU 86 A PHE 87 n 87 PHE 87 A LEU 88 n 88 LEU 88 A LYS 89 n 89 LYS 89 A LEU 90 n 90 LEU 90 A ARG 91 n 91 ARG 91 A GLU 92 n 92 GLU 92 A ASP 93 n 93 ASP 93 A TYR 94 n 94 TYR 94 A ASN 95 n 95 ASN 95 A LYS 96 n 96 LYS 96 A THR 97 n 97 THR 97 A ARG 98 n 98 ARG 98 A ASP 99 n 99 ASP 99 A PRO 100 n 100 PRO 100 A LEU 101 n 101 LEU 101 A LEU 102 n 102 LEU 102 A LEU 103 n 103 LEU 103 A TYR 104 n 104 TYR 104 A VAL 105 n 105 VAL 105 A LEU 106 n 106 LEU 106 A HIS 107 n 107 HIS 107 A PHE 108 n 108 PHE 108 A HIS 109 n 109 HIS 109 A GLY 110 n 110 GLY 110 A PHE 111 n 111 PHE 111 A SER 112 n 112 SER 112 A ASN 113 n 113 ASN 113 A MET 114 n 114 MET 114 A ILE 115 n 115 ILE 115 A ARG 116 n 116 ARG 116 A ILE 117 n 117 ILE 117 A ASN 118 n 118 ASN 118 A ASP 119 n 119 ASP 119 A LYS 120 n 120 LYS 120 A GLY 121 n 121 GLY 121 A ASN 122 n 122 ASN 122 A PHE 123 n 123 PHE 123 A THR 124 n 124 THR 124 A THR 125 n 125 THR 125 A PRO 126 n 126 PRO 126 A PHE 127 n 127 PHE 127 A GLY 128 n 128 GLY 128 A LYS 129 n 129 LYS 129 A ARG 130 n 130 ARG 130 A THR 131 n 131 THR 131 A ILE 132 n 132 ILE 132 A ASN 133 n 133 ASN 133 A LYS 134 n 134 LYS 134 A ASN 135 n 135 ASN 135 A SER 136 n 136 SER 136 A GLU 137 n 137 GLU 137 A LYS 138 n 138 LYS 138 A GLN 139 n 139 GLN 139 A TYR 140 n 140 TYR 140 A ASN 141 n 141 ASN 141 A HIS 142 n 142 HIS 142 A PHE 143 n 143 PHE 143 A LYS 144 n 144 LYS 144 A GLN 145 n 145 GLN 145 A ASN 146 n 146 ASN 146 A CYS 147 n 147 CYS 147 A ASP 148 n 148 ASP 148 A LYS 149 n 149 LYS 149 A ILE 150 n 150 ILE 150 A ILE 151 n 151 ILE 151 A PHE 152 n 152 PHE 152 A SER 153 n 153 SER 153 A SER 154 n 154 SER 154 A LEU 155 n 155 LEU 155 A HIS 156 n 156 HIS 156 A PHE 157 n 157 PHE 157 A LYS 158 n 158 LYS 158 A ASP 159 n 159 ASP 159 A VAL 160 n 160 VAL 160 A LYS 161 n 161 LYS 161 A ILE 162 n 162 ILE 162 A LEU 163 n 163 LEU 163 A ASP 164 n 164 ASP 164 A GLY 165 n 165 GLY 165 A ASP 166 n 166 ASP 166 A PHE 167 n 167 PHE 167 A VAL 168 n 168 VAL 168 A TYR 169 n 169 TYR 169 A VAL 170 n 170 VAL 170 A ASP 171 n 171 ASP 171 A PRO 172 n 172 PRO 172 A PRO 173 n 173 PRO 173 A TYR 174 n 174 TYR 174 A LEU 175 n 175 LEU 175 A ILE 176 n 176 ILE 176 A THR 177 n 177 THR 177 A VAL 178 n 178 VAL 178 A ALA 179 n 179 ALA 179 A ASP 180 n 180 ASP 180 A TYR 181 n 181 TYR 181 A ASN 182 n 182 ASN 182 A LYS 183 n 183 LYS 183 A PHE 184 n 184 PHE 184 A TRP 185 n 185 TRP 185 A SER 186 n 186 SER 186 A GLU 187 n 187 GLU 187 A ASP 188 n 188 ASP 188 A GLU 189 n 189 GLU 189 A GLU 190 n 190 GLU 190 A LYS 191 n 191 LYS 191 A ASP 192 n 192 ASP 192 A LEU 193 n 193 LEU 193 A LEU 194 n 194 LEU 194 A ASN 195 n 195 ASN 195 A LEU 196 n 196 LEU 196 A LEU 197 n 197 LEU 197 A ASP 198 n 198 ASP 198 A SER 199 n 199 SER 199 A LEU 200 n 200 LEU 200 A ASN 201 n 201 ASN 201 A ASP 202 n 202 ASP 202 A ARG 203 n 203 ARG 203 A GLY 204 n 204 GLY 204 A ILE 205 n 205 ILE 205 A LYS 206 n 206 LYS 206 A PHE 207 n 207 PHE 207 A GLY 208 n 208 GLY 208 A GLN 209 n 209 GLN 209 A SER 210 n 210 SER 210 A ASN 211 n 211 ASN 211 A VAL 212 n 212 VAL 212 A LEU 213 n 213 LEU 213 A GLU 214 n 214 GLU 214 A HIS 215 n 215 HIS 215 A HIS 216 n 216 HIS 216 A GLY 217 n 217 GLY 217 A LYS 218 n 218 LYS 218 A GLU 219 n 219 GLU 219 A ASN 220 n 220 ASN 220 A THR 221 n 221 THR 221 A LEU 222 n 222 LEU 222 A LEU 223 n 223 LEU 223 A LYS 224 n 224 LYS 224 A GLU 225 n 225 GLU 225 A TRP 226 n 226 TRP 226 A SER 227 n 227 SER 227 A LYS 228 n 228 LYS 228 A LYS 229 n 229 LYS 229 A TYR 230 n 230 TYR 230 A ASN 231 n 231 ASN 231 A VAL 232 n 232 VAL 232 A LYS 233 n 233 LYS 233 A HIS 234 n 234 HIS 234 A LEU 235 n 235 LEU 235 A n 236 236 A n 237 237 A n 238 238 A n 239 239 A n 240 240 A n 241 241 A n 242 242 A n 243 243 A n 244 244 A n 245 245 A n 246 246 A n 247 247 A n 248 248 A n 249 249 A n 250 250 A n 251 251 A n 252 252 A n 253 253 A GLU 254 n 254 GLU 254 A VAL 255 n 255 VAL 255 A TYR 256 n 256 TYR 256 A ILE 257 n 257 ILE 257 A PHE 258 n 258 PHE 258 A ASN 259 n 259 ASN 259 A MET 1 n 1 MET 1 B LEU 2 n 2 LEU 2 B GLY 3 n 3 GLY 3 B ALA 4 n 4 ALA 4 B ILE 5 n 5 ILE 5 B ALA 6 n 6 ALA 6 B TYR 7 n 7 TYR 7 B THR 8 n 8 THR 8 B GLY 9 n 9 GLY 9 B ASN 10 n 10 ASN 10 B LYS 11 n 11 LYS 11 B GLN 12 n 12 GLN 12 B SER 13 n 13 SER 13 B LEU 14 n 14 LEU 14 B LEU 15 n 15 LEU 15 B PRO 16 n 16 PRO 16 B GLU 17 n 17 GLU 17 B LEU 18 n 18 LEU 18 B LYS 19 n 19 LYS 19 B SER 20 n 20 SER 20 B HIS 21 n 21 HIS 21 B PHE 22 n 22 PHE 22 B PRO 23 n 23 PRO 23 B LYS 24 n 24 LYS 24 B TYR 25 n 25 TYR 25 B ASN 26 n 26 ASN 26 B ARG 27 n 27 ARG 27 B PHE 28 n 28 PHE 28 B VAL 29 n 29 VAL 29 B ASP 30 n 30 ASP 30 B LEU 31 n 31 LEU 31 B PHE 32 n 32 PHE 32 B CYS 33 n 33 CYS 33 B GLY 34 n 34 GLY 34 B GLY 35 n 35 GLY 35 B LEU 36 n 36 LEU 36 B SER 37 n 37 SER 37 B VAL 38 n 38 VAL 38 B SER 39 n 39 SER 39 B LEU 40 n 40 LEU 40 B ASN 41 n 41 ASN 41 B VAL 42 n 42 VAL 42 B ASN 43 n 43 ASN 43 B GLY 44 n 44 GLY 44 B CPR 45 n 45 PRO 45 B VAL 46 n 46 VAL 46 B LEU 47 n 47 LEU 47 B ALA 48 n 48 ALA 48 B ASN 49 n 49 ASN 49 B ASP 50 n 50 ASP 50 B ILE 51 n 51 ILE 51 B GLN 52 n 52 GLN 52 B GLU 53 n 53 GLU 53 B PRO 54 n 54 PRO 54 B ILE 55 n 55 ILE 55 B ILE 56 n 56 ILE 56 B GLU 57 n 57 GLU 57 B MET 58 n 58 MET 58 B TYR 59 n 59 TYR 59 B LYS 60 n 60 LYS 60 B ARG 61 n 61 ARG 61 B LEU 62 n 62 LEU 62 B ILE 63 n 63 ILE 63 B ASN 64 n 64 ASN 64 B VAL 65 n 65 VAL 65 B SER 66 n 66 SER 66 B TRP 67 n 67 TRP 67 B ASP 68 n 68 ASP 68 B ASP 69 n 69 ASP 69 B VAL 70 n 70 VAL 70 B LEU 71 n 71 LEU 71 B LYS 72 n 72 LYS 72 B VAL 73 n 73 VAL 73 B ILE 74 n 74 ILE 74 B LYS 75 n 75 LYS 75 B GLN 76 n 76 GLN 76 B TYR 77 n 77 TYR 77 B LYS 78 n 78 LYS 78 B LEU 79 n 79 LEU 79 B SER 80 n 80 SER 80 B LYS 81 n 81 LYS 81 B THR 82 n 82 THR 82 B SER 83 n 83 SER 83 B LYS 84 n 84 LYS 84 B GLU 85 n 85 GLU 85 B GLU 86 n 86 GLU 86 B PHE 87 n 87 PHE 87 B LEU 88 n 88 LEU 88 B LYS 89 n 89 LYS 89 B LEU 90 n 90 LEU 90 B ARG 91 n 91 ARG 91 B GLU 92 n 92 GLU 92 B ASP 93 n 93 ASP 93 B TYR 94 n 94 TYR 94 B ASN 95 n 95 ASN 95 B LYS 96 n 96 LYS 96 B THR 97 n 97 THR 97 B ARG 98 n 98 ARG 98 B ASP 99 n 99 ASP 99 B PRO 100 n 100 PRO 100 B LEU 101 n 101 LEU 101 B LEU 102 n 102 LEU 102 B LEU 103 n 103 LEU 103 B TYR 104 n 104 TYR 104 B VAL 105 n 105 VAL 105 B LEU 106 n 106 LEU 106 B HIS 107 n 107 HIS 107 B PHE 108 n 108 PHE 108 B HIS 109 n 109 HIS 109 B GLY 110 n 110 GLY 110 B PHE 111 n 111 PHE 111 B SER 112 n 112 SER 112 B ASN 113 n 113 ASN 113 B MET 114 n 114 MET 114 B ILE 115 n 115 ILE 115 B ARG 116 n 116 ARG 116 B ILE 117 n 117 ILE 117 B ASN 118 n 118 ASN 118 B ASP 119 n 119 ASP 119 B LYS 120 n 120 LYS 120 B GLY 121 n 121 GLY 121 B ASN 122 n 122 ASN 122 B PHE 123 n 123 PHE 123 B THR 124 n 124 THR 124 B THR 125 n 125 THR 125 B PRO 126 n 126 PRO 126 B PHE 127 n 127 PHE 127 B GLY 128 n 128 GLY 128 B LYS 129 n 129 LYS 129 B ARG 130 n 130 ARG 130 B THR 131 n 131 THR 131 B ILE 132 n 132 ILE 132 B ASN 133 n 133 ASN 133 B LYS 134 n 134 LYS 134 B ASN 135 n 135 ASN 135 B SER 136 n 136 SER 136 B GLU 137 n 137 GLU 137 B LYS 138 n 138 LYS 138 B GLN 139 n 139 GLN 139 B TYR 140 n 140 TYR 140 B ASN 141 n 141 ASN 141 B HIS 142 n 142 HIS 142 B PHE 143 n 143 PHE 143 B LYS 144 n 144 LYS 144 B GLN 145 n 145 GLN 145 B ASN 146 n 146 ASN 146 B CYS 147 n 147 CYS 147 B ASP 148 n 148 ASP 148 B LYS 149 n 149 LYS 149 B ILE 150 n 150 ILE 150 B ILE 151 n 151 ILE 151 B PHE 152 n 152 PHE 152 B SER 153 n 153 SER 153 B SER 154 n 154 SER 154 B LEU 155 n 155 LEU 155 B HIS 156 n 156 HIS 156 B PHE 157 n 157 PHE 157 B LYS 158 n 158 LYS 158 B ASP 159 n 159 ASP 159 B VAL 160 n 160 VAL 160 B LYS 161 n 161 LYS 161 B ILE 162 n 162 ILE 162 B LEU 163 n 163 LEU 163 B ASP 164 n 164 ASP 164 B GLY 165 n 165 GLY 165 B ASP 166 n 166 ASP 166 B PHE 167 n 167 PHE 167 B VAL 168 n 168 VAL 168 B TYR 169 n 169 TYR 169 B VAL 170 n 170 VAL 170 B ASP 171 n 171 ASP 171 B PRO 172 n 172 PRO 172 B PRO 173 n 173 PRO 173 B TYR 174 n 174 TYR 174 B LEU 175 n 175 LEU 175 B ILE 176 n 176 ILE 176 B THR 177 n 177 THR 177 B VAL 178 n 178 VAL 178 B ALA 179 n 179 ALA 179 B ASP 180 n 180 ASP 180 B TYR 181 n 181 TYR 181 B ASN 182 n 182 ASN 182 B LYS 183 n 183 LYS 183 B PHE 184 n 184 PHE 184 B TRP 185 n 185 TRP 185 B SER 186 n 186 SER 186 B GLU 187 n 187 GLU 187 B ASP 188 n 188 ASP 188 B GLU 189 n 189 GLU 189 B GLU 190 n 190 GLU 190 B LYS 191 n 191 LYS 191 B ASP 192 n 192 ASP 192 B LEU 193 n 193 LEU 193 B LEU 194 n 194 LEU 194 B ASN 195 n 195 ASN 195 B LEU 196 n 196 LEU 196 B LEU 197 n 197 LEU 197 B ASP 198 n 198 ASP 198 B SER 199 n 199 SER 199 B LEU 200 n 200 LEU 200 B ASN 201 n 201 ASN 201 B ASP 202 n 202 ASP 202 B ARG 203 n 203 ARG 203 B GLY 204 n 204 GLY 204 B ILE 205 n 205 ILE 205 B LYS 206 n 206 LYS 206 B PHE 207 n 207 PHE 207 B GLY 208 n 208 GLY 208 B GLN 209 n 209 GLN 209 B SER 210 n 210 SER 210 B ASN 211 n 211 ASN 211 B VAL 212 n 212 VAL 212 B LEU 213 n 213 LEU 213 B GLU 214 n 214 GLU 214 B HIS 215 n 215 HIS 215 B HIS 216 n 216 HIS 216 B GLY 217 n 217 GLY 217 B LYS 218 n 218 LYS 218 B GLU 219 n 219 GLU 219 B ASN 220 n 220 ASN 220 B THR 221 n 221 THR 221 B LEU 222 n 222 LEU 222 B LEU 223 n 223 LEU 223 B LYS 224 n 224 LYS 224 B GLU 225 n 225 GLU 225 B TRP 226 n 226 TRP 226 B SER 227 n 227 SER 227 B LYS 228 n 228 LYS 228 B LYS 229 n 229 LYS 229 B TYR 230 n 230 TYR 230 B ASN 231 n 231 ASN 231 B VAL 232 n 232 VAL 232 B LYS 233 n 233 LYS 233 B HIS 234 n 234 HIS 234 B LEU 235 n 235 LEU 235 B n 236 236 B n 237 237 B n 238 238 B n 239 239 B n 240 240 B n 241 241 B n 242 242 B n 243 243 B n 244 244 B n 245 245 B n 246 246 B n 247 247 B n 248 248 B n 249 249 B n 250 250 B n 251 251 B n 252 252 B n 253 253 B GLU 254 n 254 GLU 254 B VAL 255 n 255 VAL 255 B TYR 256 n 256 TYR 256 B ILE 257 n 257 ILE 257 B PHE 258 n 258 PHE 258 B ASN 259 n 259 ASN 259 B author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 151 C O ILE 151 A N VAL 46 C N VAL 46 A O LEU 47 C O LEU 47 A N PHE 28 C N PHE 28 A N ARG 27 C N ARG 27 A O PHE 167 C O PHE 167 A N VAL 170 C N VAL 170 A O GLY 208 C O GLY 208 A N ASN 211 C N ASN 211 A O VAL 255 C O VAL 255 A N HIS 215 C N HIS 215 A O LYS 218 C O LYS 218 B O ILE 151 D O ILE 151 B N VAL 46 D N VAL 46 B O LEU 47 D O LEU 47 B N PHE 28 D N PHE 28 B N ARG 27 D N ARG 27 B O PHE 167 D O PHE 167 B N VAL 170 D N VAL 170 B O GLY 208 D O GLY 208 B N ASN 211 D N ASN 211 B O VAL 255 D O VAL 255 B N HIS 215 D N HIS 215 B O LYS 218 D O LYS 218 1 A ASN 236 C ASN 236 1 Y 1 A LYS 237 C LYS 237 1 Y 1 A LYS 238 C LYS 238 1 Y 1 A TYR 239 C TYR 239 1 Y 1 A VAL 240 C VAL 240 1 Y 1 A PHE 241 C PHE 241 1 Y 1 A ASN 242 C ASN 242 1 Y 1 A ILE 243 C ILE 243 1 Y 1 A TYR 244 C TYR 244 1 Y 1 A HIS 245 C HIS 245 1 Y 1 A SER 246 C SER 246 1 Y 1 A LYS 247 C LYS 247 1 Y 1 A GLU 248 C GLU 248 1 Y 1 A LYS 249 C LYS 249 1 Y 1 A ASN 250 C ASN 250 1 Y 1 A GLY 251 C GLY 251 1 Y 1 A THR 252 C THR 252 1 Y 1 A ASP 253 C ASP 253 1 Y 1 B ASN 236 D ASN 236 1 Y 1 B LYS 237 D LYS 237 1 Y 1 B LYS 238 D LYS 238 1 Y 1 B TYR 239 D TYR 239 1 Y 1 B VAL 240 D VAL 240 1 Y 1 B PHE 241 D PHE 241 1 Y 1 B ASN 242 D ASN 242 1 Y 1 B ILE 243 D ILE 243 1 Y 1 B TYR 244 D TYR 244 1 Y 1 B HIS 245 D HIS 245 1 Y 1 B SER 246 D SER 246 1 Y 1 B LYS 247 D LYS 247 1 Y 1 B GLU 248 D GLU 248 1 Y 1 B LYS 249 D LYS 249 1 Y 1 B ASN 250 D ASN 250 1 Y 1 B GLY 251 D GLY 251 1 Y 1 B THR 252 D THR 252 1 Y 1 B ASP 253 D ASP 253 1 Y 1 C DA 404 0.071 SIDE CHAIN 1 C DG 406 0.067 SIDE CHAIN 1 C DA 407 0.061 SIDE CHAIN 1 C DC 409 0.082 SIDE CHAIN 1 C DC 410 0.059 SIDE CHAIN 1 D DA 424 0.051 SIDE CHAIN 1 13.22 1.40 114.30 127.52 C C C N9 C1' C2' DG DG DG 405 405 405 N 1 1.87 0.30 108.30 110.17 C C C O4' C1' N9 DG DG DG 405 405 405 N 1 9.91 1.40 114.30 124.21 C C C N9 C1' C2' DG DG DG 406 406 406 N 1 4.12 0.30 108.30 112.42 C C C O4' C1' N1 DT DT DT 408 408 408 N 1 8.69 1.40 114.30 122.99 C C C N1 C1' C2' DC DC DC 410 410 410 N 1 2.05 0.30 108.30 110.35 C C C O4' C1' N1 DT DT DT 413 413 413 N 1 A LEU 15 -27.79 -60.22 1 A TYR 25 178.59 143.45 1 A LEU 36 91.80 0.60 1 A ASN 43 -36.59 132.36 1 A ASN 64 -105.87 68.79 1 A SER 80 -179.05 -176.93 1 A SER 83 -63.87 97.98 1 A LEU 106 -53.58 -75.24 1 A PHE 111 -57.69 103.12 1 A SER 112 72.12 35.16 1 A ASN 113 49.65 21.83 1 A THR 131 -166.61 -152.92 1 A ASN 133 -101.33 -151.83 1 A PHE 157 -33.84 -30.78 1 A ASP 159 -101.43 72.75 1 A ASP 164 -10.48 148.52 1 A VAL 168 -119.46 77.53 1 A ASP 171 -112.31 78.85 1 A ILE 176 -94.47 41.05 1 A ALA 179 163.81 139.13 1 A ILE 205 -59.68 108.87 1 A ASN 211 -176.97 -177.39 1 A THR 221 -39.42 -77.84 1 B LEU 15 -27.06 -62.16 1 B TYR 25 178.60 143.45 1 B LEU 36 90.21 -0.80 1 B ASN 43 -36.29 131.06 1 B ASN 64 -105.43 66.83 1 B SER 80 -178.44 -177.46 1 B SER 83 -63.47 95.95 1 B LEU 106 -51.87 -76.87 1 B HIS 107 -36.09 -38.87 1 B PHE 111 -56.27 101.70 1 B THR 131 -166.21 -152.92 1 B ASN 133 -103.66 -155.35 1 B PHE 157 -33.69 -31.32 1 B ASP 159 -102.17 72.68 1 B ASP 164 -9.20 149.49 1 B VAL 168 -118.43 75.66 1 B ASP 171 -111.27 76.42 1 B ILE 176 -93.46 41.53 1 B ALA 179 160.74 139.77 1 B ILE 205 -59.03 107.24 1 B ASN 211 -174.26 -176.12 1 B THR 221 -42.32 -72.60 CNS_TOPPAR:protein_rep.param CNS_TOPPAR:dna-rna_rep.param sam.par CNS_TOPPAR:ion.param -15.321 0.000 -7.275 4.023 0.000 11.298 0.293 0.238 3.1 20.0 554 10955 5.0 RANDOM 1 0 MAD Engh & Huber 3.1 20.0 0 4538 54 486 3998 1.4 0.008 23.1 1.2 4.851 1.5 7.123 2.0 7.444 2.0 9.936 2.5 3.1 20.0 1Q0T 11204 11038 0 0 0.096 1 13.9 3.9 98.6 0.152 3.10 3.21 8.6 97.3 data collection HKL-2000 data scaling SCALEPACK phasing SOLVE refinement CNS 1.0 data reduction HKL-2000 Ternary Structure of T4DAM with AdoHcy and DNA 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N 4 N N A LEU 14 C LEU 14 HELX_P A SER 20 C SER 20 1 1 7 A GLN 52 C GLN 52 HELX_P A ILE 63 C ILE 63 1 2 12 A SER 66 C SER 66 HELX_P A LYS 78 C LYS 78 1 3 13 A SER 83 C SER 83 HELX_P A ARG 98 C ARG 98 1 4 16 A ASP 99 C ASP 99 HELX_P A PHE 108 C PHE 108 1 5 10 A HIS 109 C HIS 109 HELX_P A MET 114 C MET 114 5 6 6 A ASN 133 C ASN 133 HELX_P A CYS 147 C CYS 147 1 7 15 A HIS 156 C HIS 156 HELX_P A VAL 160 C VAL 160 5 8 5 A ALA 179 C ALA 179 HELX_P A PHE 184 C PHE 184 5 9 6 A SER 186 C SER 186 HELX_P A ASP 202 C ASP 202 1 10 17 A ASN 220 C ASN 220 HELX_P A LYS 229 C LYS 229 1 11 10 B LEU 14 D LEU 14 HELX_P B SER 20 D SER 20 1 12 7 B GLN 52 D GLN 52 HELX_P B ILE 63 D ILE 63 1 13 12 B SER 66 D SER 66 HELX_P B LYS 78 D LYS 78 1 14 13 B SER 83 D SER 83 HELX_P B ARG 98 D ARG 98 1 15 16 B ASP 99 D ASP 99 HELX_P B PHE 108 D PHE 108 1 16 10 B HIS 109 D HIS 109 HELX_P B MET 114 D MET 114 5 17 6 B ASN 133 D ASN 133 HELX_P B CYS 147 D CYS 147 1 18 15 B HIS 156 D HIS 156 HELX_P B VAL 160 D VAL 160 5 19 5 B ALA 179 D ALA 179 HELX_P B PHE 184 D PHE 184 5 20 6 B SER 186 D SER 186 HELX_P B ASP 202 D ASP 202 1 21 17 B ASN 220 D ASN 220 HELX_P B LYS 229 D LYS 229 1 22 10 hydrog WATSON-CRICK C DA 402 A N1 DA 1 1_555 D DT 433 B N3 DT 12 1_555 hydrog WATSON-CRICK C DA 402 A N6 DA 1 1_555 D DT 433 B O4 DT 12 1_555 hydrog WATSON-CRICK C DC 403 A N3 DC 2 1_555 D DG 432 B N1 DG 11 1_555 hydrog WATSON-CRICK C DC 403 A N4 DC 2 1_555 D DG 432 B O6 DG 11 1_555 hydrog WATSON-CRICK C DC 403 A O2 DC 2 1_555 D DG 432 B N2 DG 11 1_555 hydrog WATSON-CRICK C DA 404 A N1 DA 3 1_555 D DT 431 B N3 DT 10 1_555 hydrog WATSON-CRICK C DA 404 A N6 DA 3 1_555 D DT 431 B O4 DT 10 1_555 hydrog WATSON-CRICK C DG 405 A N1 DG 4 1_555 D DC 430 B N3 DC 9 1_555 hydrog WATSON-CRICK C DG 405 A N2 DG 4 1_555 D DC 430 B O2 DC 9 1_555 hydrog WATSON-CRICK C DG 405 A O6 DG 4 1_555 D DC 430 B N4 DC 9 1_555 hydrog WATSON-CRICK C DG 406 A N1 DG 5 1_555 D DC 429 B N3 DC 8 1_555 hydrog WATSON-CRICK C DG 406 A N2 DG 5 1_555 D DC 429 B O2 DC 8 1_555 hydrog WATSON-CRICK C DG 406 A O6 DG 5 1_555 D DC 429 B N4 DC 8 1_555 hydrog WATSON-CRICK C DA 407 A N1 DA 6 1_555 D DT 428 B N3 DT 7 1_555 hydrog WATSON-CRICK C DA 407 A N6 DA 6 1_555 D DT 428 B O4 DT 7 1_555 hydrog WATSON-CRICK C DT 408 A N3 DT 7 1_555 D DA 427 B N1 DA 6 1_555 hydrog WATSON-CRICK C DT 408 A O4 DT 7 1_555 D DA 427 B N6 DA 6 1_555 hydrog WATSON-CRICK C DC 409 A N3 DC 8 1_555 D DG 426 B N1 DG 5 1_555 hydrog WATSON-CRICK C DC 409 A N4 DC 8 1_555 D DG 426 B O6 DG 5 1_555 hydrog WATSON-CRICK C DC 409 A O2 DC 8 1_555 D DG 426 B N2 DG 5 1_555 hydrog WATSON-CRICK C DC 410 A N3 DC 9 1_555 D DG 425 B N1 DG 4 1_555 hydrog WATSON-CRICK C DC 410 A N4 DC 9 1_555 D DG 425 B O6 DG 4 1_555 hydrog WATSON-CRICK C DC 410 A O2 DC 9 1_555 D DG 425 B N2 DG 4 1_555 hydrog WATSON-CRICK C DT 411 A N3 DT 10 1_555 D DA 424 B N1 DA 3 1_555 hydrog WATSON-CRICK C DT 411 A O4 DT 10 1_555 D DA 424 B N6 DA 3 1_555 hydrog WATSON-CRICK C DG 412 A N1 DG 11 1_555 D DC 423 B N3 DC 2 1_555 hydrog WATSON-CRICK C DG 412 A N2 DG 11 1_555 D DC 423 B O2 DC 2 1_555 hydrog WATSON-CRICK C DG 412 A O6 DG 11 1_555 D DC 423 B N4 DC 2 1_555 hydrog WATSON-CRICK C DT 413 A N3 DT 12 1_555 D DA 422 B N1 DA 1 1_555 hydrog WATSON-CRICK C DT 413 A O4 DT 12 1_555 D DA 422 B N6 DA 1 1_555 Transferase/DNA T4DAM, Methyltransferase, DNA, Transferase-DNA COMPLEX A GLY 44 C GLY 44 1 A PRO 45 C PRO 45 0.80 B GLY 44 D GLY 44 1 B PRO 45 D PRO 45 -1.78 DMA_BPT4 UNP 2 1 P04392 MLGAIAYTGNKQSLLPELKSHFPKYNRFVDLFCGGLSVSLNVNGPVLANDIQEPIIEMYKRLINVSWDDVLKVIKQYKLS KTSKEEFLKLREDYNKTRDPLLLYVLHFHGFSNMIRINDKGNFTTPFGKRTINKNSEKQYNHFKQNCDKIIFSSLHFKDV KILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGQSNVLEHHGKENTLLKEWSKKYNVKHLNKKYV FNIYHSKEKNGTDEVYIFN 1Q0T PDB 1 1Q0T 1 259 1Q0T 1 259 P04392 A 1 1 259 1 259 1Q0T 1 259 P04392 B 1 1 259 402 413 1Q0T 402 413 1Q0T C 2 1 12 422 433 1Q0T 422 433 1Q0T D 2 1 12 6 2 6 2 parallel parallel parallel parallel anti-parallel anti-parallel parallel parallel parallel parallel anti-parallel anti-parallel A ILE 150 C ILE 150 A SER 153 C SER 153 A VAL 46 C VAL 46 A ASN 49 C ASN 49 A ARG 27 C ARG 27 A ASP 30 C ASP 30 A ASP 166 C ASP 166 A VAL 170 C VAL 170 A PHE 207 C PHE 207 A ASN 211 C ASN 211 A VAL 255 C VAL 255 A TYR 256 C TYR 256 A GLU 214 C GLU 214 A HIS 215 C HIS 215 A LYS 218 C LYS 218 A GLU 219 C GLU 219 B ILE 150 D ILE 150 B SER 153 D SER 153 B VAL 46 D VAL 46 B ASN 49 D ASN 49 B ARG 27 D ARG 27 B ASP 30 D ASP 30 B ASP 166 D ASP 166 B VAL 170 D VAL 170 B PHE 207 D PHE 207 B ASN 211 D ASN 211 B VAL 255 D VAL 255 B TYR 256 D TYR 256 B GLU 214 D GLU 214 B HIS 215 D HIS 215 B LYS 218 D LYS 218 B GLU 219 D GLU 219 BINDING SITE FOR RESIDUE IOD D 1 D IOD 1 Software 1 BINDING SITE FOR RESIDUE IOD C 2 C IOD 2 Software 1 BINDING SITE FOR RESIDUE SAH A 300 A SAH 300 Software 19 BINDING SITE FOR RESIDUE SAH B 301 B SAH 301 Software 17 D DC 423 B DC 2 1 1_555 C DC 403 A DC 2 1 1_555 A TYR 7 C TYR 7 19 1_555 A ASN 10 C ASN 10 19 1_555 A LYS 11 C LYS 11 19 1_555 A PHE 32 C PHE 32 19 1_555 A CYS 33 C CYS 33 19 1_555 A GLY 34 C GLY 34 19 1_555 A GLY 35 C GLY 35 19 1_555 A SER 37 C SER 37 19 1_555 A VAL 38 C VAL 38 19 1_555 A ASP 50 C ASP 50 19 1_555 A ILE 51 C ILE 51 19 1_555 A GLN 52 C GLN 52 19 1_555 A HIS 156 C HIS 156 19 1_555 A PHE 157 C PHE 157 19 1_555 A ASP 171 C ASP 171 19 1_555 A PRO 173 C PRO 173 19 1_555 A TYR 181 C TYR 181 19 1_555 A PHE 184 C PHE 184 19 1_555 A TRP 185 C TRP 185 19 1_555 B TYR 7 D TYR 7 17 1_555 B ASN 10 D ASN 10 17 1_555 B LYS 11 D LYS 11 17 1_555 B PHE 32 D PHE 32 17 1_555 B CYS 33 D CYS 33 17 1_555 B GLY 35 D GLY 35 17 1_555 B LEU 36 D LEU 36 17 1_555 B SER 37 D SER 37 17 1_555 B ASP 50 D ASP 50 17 1_555 B ILE 51 D ILE 51 17 1_555 B GLN 52 D GLN 52 17 1_555 B HIS 156 D HIS 156 17 1_555 B PHE 157 D PHE 157 17 1_555 B ASP 171 D ASP 171 17 1_555 B PRO 173 D PRO 173 17 1_555 B TYR 181 D TYR 181 17 1_555 B PHE 184 D PHE 184 17 1_555 4 P 1 21 1