0.014339 0.000000 0.000000 0.000000 0.017397 0.000000 0.000000 0.000000 0.019335 0.00000 0.00000 0.00000 Dhe-Paganon, S. Werner, E.D. Nishi, M. Chi, Y.-I. Shoelson, S.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 90.00 69.740 57.480 51.720 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Mol.Biol. 1545-9993 11 968 974 10.1038/nsmb829 15378031 A phenylalanine zipper mediates APS dimerization. 2004 10.2210/pdb1q2h/pdb pdb_00001q2h 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2002-01-01 BRANDEIS - B4 MAD M x-ray 1 0.95000 1.0 0.9174 1.0 0.9211 1.0 0.9208 1.0 X12C NSLS 0.95000, 0.9174, 0.9211, 0.9208 SYNCHROTRON NSLS BEAMLINE X12C 7778.675 adaptor protein with pleckstrin homology and src homology 2 domains 3 man polymer 18.015 water 64 nat water APS no no GSHMPDWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVAGP GSHMPDWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVAGP A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample APS 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) plasmid pET28a 1 2.22 44.62 VAPOR DIFFUSION, HANGING DROP 6.0 0.48-0.68 M sodium iodide, 2.5 % PEG 4K, 0.09 M sodium citrate, 10 mM DTT, pH 6.0, VAPOR DIFFUSION, HANGING DROP database_2 struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Database references 1 0 2004-08-03 1 1 2008-04-29 1 2 2011-07-13 1 3 2022-12-21 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2003-07-24 REL HOH water HOH 2 2 HOH HOH 86 A HOH 5 2 HOH HOH 87 A HOH 6 2 HOH HOH 88 A HOH 8 2 HOH HOH 89 A HOH 16 2 HOH HOH 90 A HOH 17 2 HOH HOH 91 A HOH 20 2 HOH HOH 92 A HOH 21 2 HOH HOH 93 A HOH 22 2 HOH HOH 94 A HOH 25 2 HOH HOH 95 A HOH 29 2 HOH HOH 96 A HOH 32 2 HOH HOH 97 A HOH 33 2 HOH HOH 98 A HOH 40 2 HOH HOH 99 A HOH 43 2 HOH HOH 100 A HOH 48 2 HOH HOH 101 A HOH 51 2 HOH HOH 102 A HOH 53 2 HOH HOH 103 A HOH 56 2 HOH HOH 104 A HOH 57 2 HOH HOH 105 A HOH 58 2 HOH HOH 106 A HOH 59 2 HOH HOH 107 A HOH 62 2 HOH HOH 108 A HOH 4 2 HOH HOH 86 B HOH 10 2 HOH HOH 87 B HOH 11 2 HOH HOH 88 B HOH 13 2 HOH HOH 89 B HOH 14 2 HOH HOH 90 B HOH 18 2 HOH HOH 91 B HOH 23 2 HOH HOH 92 B HOH 24 2 HOH HOH 93 B HOH 34 2 HOH HOH 94 B HOH 35 2 HOH HOH 95 B HOH 36 2 HOH HOH 96 B HOH 38 2 HOH HOH 97 B HOH 39 2 HOH HOH 98 B HOH 44 2 HOH HOH 99 B HOH 46 2 HOH HOH 100 B HOH 47 2 HOH HOH 101 B HOH 49 2 HOH HOH 102 B HOH 50 2 HOH HOH 103 B HOH 52 2 HOH HOH 104 B HOH 61 2 HOH HOH 105 B HOH 1 2 HOH HOH 86 C HOH 3 2 HOH HOH 87 C HOH 7 2 HOH HOH 88 C HOH 9 2 HOH HOH 89 C HOH 12 2 HOH HOH 90 C HOH 15 2 HOH HOH 91 C HOH 19 2 HOH HOH 92 C HOH 26 2 HOH HOH 93 C HOH 27 2 HOH HOH 94 C HOH 28 2 HOH HOH 95 C HOH 30 2 HOH HOH 96 C HOH 31 2 HOH HOH 97 C HOH 37 2 HOH HOH 98 C HOH 41 2 HOH HOH 99 C HOH 42 2 HOH HOH 100 C HOH 45 2 HOH HOH 101 C HOH 54 2 HOH HOH 102 C HOH 55 2 HOH HOH 103 C HOH 60 2 HOH HOH 104 C HOH 63 2 HOH HOH 105 C HOH 64 2 HOH HOH 106 C n 1 17 A n 2 18 A n 3 19 A n 4 20 A PRO 21 n 5 PRO 21 A ASP 22 n 6 ASP 22 A TRP 23 n 7 TRP 23 A ARG 24 n 8 ARG 24 A GLN 25 n 9 GLN 25 A PHE 26 n 10 PHE 26 A CYS 27 n 11 CYS 27 A GLU 28 n 12 GLU 28 A LEU 29 n 13 LEU 29 A HIS 30 n 14 HIS 30 A ALA 31 n 15 ALA 31 A GLN 32 n 16 GLN 32 A ALA 33 n 17 ALA 33 A ALA 34 n 18 ALA 34 A ALA 35 n 19 ALA 35 A VAL 36 n 20 VAL 36 A ASP 37 n 21 ASP 37 A PHE 38 n 22 PHE 38 A ALA 39 n 23 ALA 39 A HIS 40 n 24 HIS 40 A LYS 41 n 25 LYS 41 A PHE 42 n 26 PHE 42 A CYS 43 n 27 CYS 43 A ARG 44 n 28 ARG 44 A PHE 45 n 29 PHE 45 A LEU 46 n 30 LEU 46 A ARG 47 n 31 ARG 47 A ASP 48 n 32 ASP 48 A ASN 49 n 33 ASN 49 A PRO 50 n 34 PRO 50 A ALA 51 n 35 ALA 51 A TYR 52 n 36 TYR 52 A ASP 53 n 37 ASP 53 A THR 54 n 38 THR 54 A PRO 55 n 39 PRO 55 A ASP 56 n 40 ASP 56 A ALA 57 n 41 ALA 57 A GLY 58 n 42 GLY 58 A ALA 59 n 43 ALA 59 A SER 60 n 44 SER 60 A PHE 61 n 45 PHE 61 A SER 62 n 46 SER 62 A ARG 63 n 47 ARG 63 A HIS 64 n 48 HIS 64 A PHE 65 n 49 PHE 65 A ALA 66 n 50 ALA 66 A ALA 67 n 51 ALA 67 A ASN 68 n 52 ASN 68 A PHE 69 n 53 PHE 69 A LEU 70 n 54 LEU 70 A ASP 71 n 55 ASP 71 A VAL 72 n 56 VAL 72 A PHE 73 n 57 PHE 73 A GLY 74 n 58 GLY 74 A GLU 75 n 59 GLU 75 A GLU 76 n 60 GLU 76 A VAL 77 n 61 VAL 77 A ARG 78 n 62 ARG 78 A ARG 79 n 63 ARG 79 A VAL 80 n 64 VAL 80 A LEU 81 n 65 LEU 81 A VAL 82 n 66 VAL 82 A ALA 83 n 67 ALA 83 A n 68 84 A n 69 85 A n 1 17 B n 2 18 B n 3 19 B n 4 20 B PRO 21 n 5 PRO 21 B ASP 22 n 6 ASP 22 B TRP 23 n 7 TRP 23 B ARG 24 n 8 ARG 24 B GLN 25 n 9 GLN 25 B PHE 26 n 10 PHE 26 B CYS 27 n 11 CYS 27 B GLU 28 n 12 GLU 28 B LEU 29 n 13 LEU 29 B HIS 30 n 14 HIS 30 B ALA 31 n 15 ALA 31 B GLN 32 n 16 GLN 32 B ALA 33 n 17 ALA 33 B ALA 34 n 18 ALA 34 B ALA 35 n 19 ALA 35 B VAL 36 n 20 VAL 36 B ASP 37 n 21 ASP 37 B PHE 38 n 22 PHE 38 B ALA 39 n 23 ALA 39 B HIS 40 n 24 HIS 40 B LYS 41 n 25 LYS 41 B PHE 42 n 26 PHE 42 B CYS 43 n 27 CYS 43 B ARG 44 n 28 ARG 44 B PHE 45 n 29 PHE 45 B LEU 46 n 30 LEU 46 B ARG 47 n 31 ARG 47 B ASP 48 n 32 ASP 48 B ASN 49 n 33 ASN 49 B PRO 50 n 34 PRO 50 B ALA 51 n 35 ALA 51 B TYR 52 n 36 TYR 52 B ASP 53 n 37 ASP 53 B THR 54 n 38 THR 54 B PRO 55 n 39 PRO 55 B ASP 56 n 40 ASP 56 B ALA 57 n 41 ALA 57 B GLY 58 n 42 GLY 58 B ALA 59 n 43 ALA 59 B SER 60 n 44 SER 60 B PHE 61 n 45 PHE 61 B SER 62 n 46 SER 62 B ARG 63 n 47 ARG 63 B HIS 64 n 48 HIS 64 B PHE 65 n 49 PHE 65 B ALA 66 n 50 ALA 66 B ALA 67 n 51 ALA 67 B ASN 68 n 52 ASN 68 B PHE 69 n 53 PHE 69 B LEU 70 n 54 LEU 70 B ASP 71 n 55 ASP 71 B VAL 72 n 56 VAL 72 B PHE 73 n 57 PHE 73 B GLY 74 n 58 GLY 74 B GLU 75 n 59 GLU 75 B GLU 76 n 60 GLU 76 B VAL 77 n 61 VAL 77 B ARG 78 n 62 ARG 78 B ARG 79 n 63 ARG 79 B VAL 80 n 64 VAL 80 B LEU 81 n 65 LEU 81 B VAL 82 n 66 VAL 82 B n 67 83 B n 68 84 B n 69 85 B n 1 17 C n 2 18 C n 3 19 C MET 20 n 4 MET 20 C PRO 21 n 5 PRO 21 C ASP 22 n 6 ASP 22 C TRP 23 n 7 TRP 23 C ARG 24 n 8 ARG 24 C GLN 25 n 9 GLN 25 C PHE 26 n 10 PHE 26 C CYS 27 n 11 CYS 27 C GLU 28 n 12 GLU 28 C LEU 29 n 13 LEU 29 C HIS 30 n 14 HIS 30 C ALA 31 n 15 ALA 31 C GLN 32 n 16 GLN 32 C ALA 33 n 17 ALA 33 C ALA 34 n 18 ALA 34 C ALA 35 n 19 ALA 35 C VAL 36 n 20 VAL 36 C ASP 37 n 21 ASP 37 C PHE 38 n 22 PHE 38 C ALA 39 n 23 ALA 39 C HIS 40 n 24 HIS 40 C LYS 41 n 25 LYS 41 C PHE 42 n 26 PHE 42 C CYS 43 n 27 CYS 43 C ARG 44 n 28 ARG 44 C PHE 45 n 29 PHE 45 C LEU 46 n 30 LEU 46 C ARG 47 n 31 ARG 47 C ASP 48 n 32 ASP 48 C ASN 49 n 33 ASN 49 C PRO 50 n 34 PRO 50 C ALA 51 n 35 ALA 51 C TYR 52 n 36 TYR 52 C ASP 53 n 37 ASP 53 C THR 54 n 38 THR 54 C PRO 55 n 39 PRO 55 C ASP 56 n 40 ASP 56 C ALA 57 n 41 ALA 57 C GLY 58 n 42 GLY 58 C ALA 59 n 43 ALA 59 C SER 60 n 44 SER 60 C PHE 61 n 45 PHE 61 C SER 62 n 46 SER 62 C ARG 63 n 47 ARG 63 C HIS 64 n 48 HIS 64 C PHE 65 n 49 PHE 65 C ALA 66 n 50 ALA 66 C ALA 67 n 51 ALA 67 C ASN 68 n 52 ASN 68 C PHE 69 n 53 PHE 69 C LEU 70 n 54 LEU 70 C ASP 71 n 55 ASP 71 C VAL 72 n 56 VAL 72 C PHE 73 n 57 PHE 73 C GLY 74 n 58 GLY 74 C GLU 75 n 59 GLU 75 C GLU 76 n 60 GLU 76 C VAL 77 n 61 VAL 77 C ARG 78 n 62 ARG 78 C ARG 79 n 63 ARG 79 C VAL 80 n 64 VAL 80 C LEU 81 n 65 LEU 81 C VAL 82 n 66 VAL 82 C n 67 83 C n 68 84 C n 69 85 C author_and_software_defined_assembly PISA 2 dimeric author_defined_assembly 2 dimeric 3910 -50 7890 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -x+1,-y,z crystal symmetry operation 69.7400000000 0.0000000000 0.0000000000 1 A GLY 17 A GLY 1 1 Y 1 A SER 18 A SER 2 1 Y 1 A HIS 19 A HIS 3 1 Y 1 A MET 20 A MET 4 1 Y 1 A GLY 84 A GLY 68 1 Y 1 A PRO 85 A PRO 69 1 Y 1 B GLY 17 B GLY 1 1 Y 1 B SER 18 B SER 2 1 Y 1 B HIS 19 B HIS 3 1 Y 1 B MET 20 B MET 4 1 Y 1 B ALA 83 B ALA 67 1 Y 1 B GLY 84 B GLY 68 1 Y 1 B PRO 85 B PRO 69 1 Y 1 C GLY 17 C GLY 1 1 Y 1 C SER 18 C SER 2 1 Y 1 C HIS 19 C HIS 3 1 Y 1 C ALA 83 C ALA 67 1 Y 1 C GLY 84 C GLY 68 1 Y 1 C PRO 85 C PRO 69 1 Y 1 B ASP 22 72.35 92.06 1 B LEU 81 -64.05 89.04 1 C PRO 50 -53.57 -6.97 1 C TYR 52 -67.43 0.36 1 C LEU 81 -74.55 21.36 -9.130 0.000 0.000 2.964 0.000 6.166 waters picked at level greater than 3.0 0.27 0.25 1.70 30 927 19012 3.9 80.8 1 0 MAD 1.70 30 64 1592 0 0 1528 1.7 30.0 1Q2H 19012 0 1 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing SOLVE Phenylalanine Zipper Mediates APS Dimerization 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N A ASP 22 A ASP 6 HELX_P A ASN 49 A ASN 33 1 1 28 A PRO 50 A PRO 34 HELX_P A ASP 53 A ASP 37 5 2 4 A ASP 56 A ASP 40 HELX_P A ALA 83 A ALA 67 1 3 28 B ASP 22 B ASP 6 HELX_P B ASN 49 B ASN 33 1 4 28 B PRO 50 B PRO 34 HELX_P B ASP 53 B ASP 37 5 5 4 B ASP 56 B ASP 40 HELX_P B VAL 80 B VAL 64 1 6 25 C ASP 22 C ASP 6 HELX_P C ASN 49 C ASN 33 1 7 28 C ASP 56 C ASP 40 HELX_P C LEU 81 C LEU 65 1 8 26 SIGNALING PROTEIN signal transduction, SIGNALING PROTEIN APS_HUMAN UNP 1 21 O14492 PDWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFLDVFGEEVRRVLVAGP 21 85 1Q2H 21 85 O14492 A 1 5 69 21 85 1Q2H 21 85 O14492 B 1 5 69 21 85 1Q2H 21 85 O14492 C 1 5 69 1 cloning artifact GLY 17 1Q2H A O14492 UNP 1 1 cloning artifact SER 18 1Q2H A O14492 UNP 2 1 cloning artifact HIS 19 1Q2H A O14492 UNP 3 1 initiating methionine MET 20 1Q2H A O14492 UNP 4 2 cloning artifact GLY 17 1Q2H B O14492 UNP 1 2 cloning artifact SER 18 1Q2H B O14492 UNP 2 2 cloning artifact HIS 19 1Q2H B O14492 UNP 3 2 initiating methionine MET 20 1Q2H B O14492 UNP 4 3 cloning artifact GLY 17 1Q2H C O14492 UNP 1 3 cloning artifact SER 18 1Q2H C O14492 UNP 2 3 cloning artifact HIS 19 1Q2H C O14492 UNP 3 3 initiating methionine MET 20 1Q2H C O14492 UNP 4 18 P 21 21 2