0.018028 0.010409 0.000000 0.000000 0.020817 0.000000 0.000000 0.000000 0.017339 0.00000 0.00000 0.00000 Phillips Jr., G.N. Bingman, C.A. Johnson, K.A. Smith, D.W. Center for Eukaryotic Structural Genomics (CESG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 55.468 55.468 57.673 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proteins PSFGEY 0867 0887-3585 57 218 220 10.1002/prot.20215 15326607 Crystal structure of the protein from gene At3g17210 of Arabidopsis thaliana 2004 90 1 Bent cylindrical Si-mirror (Rh coating) CCD 2003-06-26 MARRESEARCH Diamond (111) double-crystal monochromator MAD M x-ray 1 0.979 1.0 14-ID-B APS 0.979 SYNCHROTRON APS BEAMLINE 14-ID-B 12576.025 protein At3g17210 1 man polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 109 nat water no yes GSH(MSE)EEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEP(MSE)KAFHWGKDVSIENLHQGYTHIFESTFE SKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL GSHMEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEY IAHPAHVEFATIFLGSLDKVLVIDYKPTSVSL A GO.13081 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n thale cress Arabidopsis Escherichia sample At3g17210 3702 Arabidopsis thaliana 562 Escherichia coli Rosetta Plasmid PVP13 1 1.95 36.5 VAPOR DIFFUSION, HANGING DROP 6.0 Sodium MES, Sodium citrate, MEthyl Ether PEG 5000, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 297K 297 Center for Eukaryotic Structural Genomics CESG PSI, Protein Structure Initiative software repository Initial release Version format compliance Derived calculations Version format compliance Refinement description 1 0 2003-11-25 1 1 2008-02-01 1 2 2011-07-13 1 3 2017-10-11 NMR structure of same protein Y RCSB Y RCSB 2003-08-04 REL REL MG MAGNESIUM ION HOH water MG 901 2 MG MG 901 A HOH 7001 3 HOH HOH 7001 A HOH 9001 3 HOH HOH 7002 A HOH 1 3 HOH HOH 7003 A HOH 2 3 HOH HOH 7004 A HOH 3 3 HOH HOH 7005 A HOH 4 3 HOH HOH 7006 A HOH 5 3 HOH HOH 7007 A HOH 6 3 HOH HOH 7008 A HOH 7 3 HOH HOH 7009 A HOH 8 3 HOH HOH 7010 A HOH 9 3 HOH HOH 7011 A HOH 10 3 HOH HOH 7012 A HOH 11 3 HOH HOH 7013 A HOH 12 3 HOH HOH 7014 A HOH 13 3 HOH HOH 7015 A HOH 14 3 HOH HOH 7016 A HOH 15 3 HOH HOH 7017 A HOH 16 3 HOH HOH 7018 A HOH 17 3 HOH HOH 7019 A HOH 18 3 HOH HOH 7020 A HOH 19 3 HOH HOH 7021 A HOH 20 3 HOH HOH 7022 A HOH 21 3 HOH HOH 7023 A HOH 22 3 HOH HOH 7024 A HOH 23 3 HOH HOH 7025 A HOH 24 3 HOH HOH 7026 A HOH 25 3 HOH HOH 7027 A HOH 26 3 HOH HOH 7028 A HOH 27 3 HOH HOH 7029 A HOH 28 3 HOH HOH 7030 A HOH 29 3 HOH HOH 7031 A HOH 30 3 HOH HOH 7032 A HOH 31 3 HOH HOH 7033 A HOH 32 3 HOH HOH 7034 A HOH 33 3 HOH HOH 7035 A HOH 34 3 HOH HOH 7036 A HOH 35 3 HOH HOH 7037 A HOH 36 3 HOH HOH 7038 A HOH 37 3 HOH HOH 7039 A HOH 38 3 HOH HOH 7040 A HOH 39 3 HOH HOH 7041 A HOH 40 3 HOH HOH 7042 A HOH 41 3 HOH HOH 7043 A HOH 42 3 HOH HOH 7044 A HOH 43 3 HOH HOH 7045 A HOH 44 3 HOH HOH 7046 A HOH 45 3 HOH HOH 7047 A HOH 46 3 HOH HOH 7048 A HOH 47 3 HOH HOH 7049 A HOH 48 3 HOH HOH 7050 A HOH 49 3 HOH HOH 7051 A HOH 50 3 HOH HOH 7052 A HOH 51 3 HOH HOH 7053 A HOH 52 3 HOH HOH 7054 A HOH 53 3 HOH HOH 7055 A HOH 54 3 HOH HOH 7056 A HOH 55 3 HOH HOH 7057 A HOH 56 3 HOH HOH 7058 A HOH 57 3 HOH HOH 7059 A HOH 58 3 HOH HOH 7060 A HOH 59 3 HOH HOH 7061 A HOH 60 3 HOH HOH 7062 A HOH 61 3 HOH HOH 7063 A HOH 62 3 HOH HOH 7064 A HOH 63 3 HOH HOH 7065 A HOH 64 3 HOH HOH 7066 A HOH 65 3 HOH HOH 7067 A HOH 66 3 HOH HOH 7068 A HOH 67 3 HOH HOH 7069 A HOH 68 3 HOH HOH 7070 A HOH 69 3 HOH HOH 7071 A HOH 70 3 HOH HOH 7072 A HOH 71 3 HOH HOH 7073 A HOH 72 3 HOH HOH 7074 A HOH 73 3 HOH HOH 7075 A HOH 74 3 HOH HOH 7076 A HOH 75 3 HOH HOH 7077 A HOH 76 3 HOH HOH 7078 A HOH 77 3 HOH HOH 7079 A HOH 78 3 HOH HOH 7080 A HOH 79 3 HOH HOH 7081 A HOH 80 3 HOH HOH 7082 A HOH 81 3 HOH HOH 7083 A HOH 82 3 HOH HOH 7084 A HOH 83 3 HOH HOH 7085 A HOH 84 3 HOH HOH 7086 A HOH 85 3 HOH HOH 7087 A HOH 86 3 HOH HOH 7088 A HOH 87 3 HOH HOH 7089 A HOH 88 3 HOH HOH 7090 A HOH 89 3 HOH HOH 7091 A HOH 90 3 HOH HOH 7092 A HOH 91 3 HOH HOH 7093 A HOH 92 3 HOH HOH 7094 A HOH 93 3 HOH HOH 7095 A HOH 94 3 HOH HOH 7096 A HOH 95 3 HOH HOH 7097 A HOH 96 3 HOH HOH 7098 A HOH 97 3 HOH HOH 7099 A HOH 98 3 HOH HOH 7100 A HOH 99 3 HOH HOH 7101 A HOH 100 3 HOH HOH 7102 A HOH 101 3 HOH HOH 7103 A HOH 102 3 HOH HOH 7104 A HOH 103 3 HOH HOH 7105 A HOH 104 3 HOH HOH 7106 A HOH 105 3 HOH HOH 7107 A HOH 106 3 HOH HOH 7108 A HOH 107 3 HOH HOH 7109 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A PRO 10 n 10 PRO 10 A VAL 11 n 11 VAL 11 A LYS 12 n 12 LYS 12 A HIS 13 n 13 HIS 13 A VAL 14 n 14 VAL 14 A LEU 15 n 15 LEU 15 A LEU 16 n 16 LEU 16 A ALA 17 n 17 ALA 17 A SER 18 n 18 SER 18 A PHE 19 n 19 PHE 19 A LYS 20 n 20 LYS 20 A ASP 21 n 21 ASP 21 A GLY 22 n 22 GLY 22 A VAL 23 n 23 VAL 23 A SER 24 n 24 SER 24 A PRO 25 n 25 PRO 25 A GLU 26 n 26 GLU 26 A LYS 27 n 27 LYS 27 A ILE 28 n 28 ILE 28 A GLU 29 n 29 GLU 29 A GLU 30 n 30 GLU 30 A LEU 31 n 31 LEU 31 A ILE 32 n 32 ILE 32 A LYS 33 n 33 LYS 33 A GLY 34 n 34 GLY 34 A TYR 35 n 35 TYR 35 A ALA 36 n 36 ALA 36 A ASN 37 n 37 ASN 37 A LEU 38 n 38 LEU 38 A VAL 39 n 39 VAL 39 A ASN 40 n 40 ASN 40 A LEU 41 n 41 LEU 41 A ILE 42 n 42 ILE 42 A GLU 43 n 43 GLU 43 A PRO 44 n 44 PRO 44 A MSE 45 n 45 MSE 45 A LYS 46 n 46 LYS 46 A ALA 47 n 47 ALA 47 A PHE 48 n 48 PHE 48 A HIS 49 n 49 HIS 49 A TRP 50 n 50 TRP 50 A GLY 51 n 51 GLY 51 A LYS 52 n 52 LYS 52 A ASP 53 n 53 ASP 53 A VAL 54 n 54 VAL 54 A SER 55 n 55 SER 55 A ILE 56 n 56 ILE 56 A GLU 57 n 57 GLU 57 A ASN 58 n 58 ASN 58 A LEU 59 n 59 LEU 59 A HIS 60 n 60 HIS 60 A GLN 61 n 61 GLN 61 A GLY 62 n 62 GLY 62 A TYR 63 n 63 TYR 63 A THR 64 n 64 THR 64 A HIS 65 n 65 HIS 65 A ILE 66 n 66 ILE 66 A PHE 67 n 67 PHE 67 A GLU 68 n 68 GLU 68 A SER 69 n 69 SER 69 A THR 70 n 70 THR 70 A PHE 71 n 71 PHE 71 A GLU 72 n 72 GLU 72 A SER 73 n 73 SER 73 A LYS 74 n 74 LYS 74 A GLU 75 n 75 GLU 75 A ALA 76 n 76 ALA 76 A VAL 77 n 77 VAL 77 A ALA 78 n 78 ALA 78 A GLU 79 n 79 GLU 79 A TYR 80 n 80 TYR 80 A ILE 81 n 81 ILE 81 A ALA 82 n 82 ALA 82 A HIS 83 n 83 HIS 83 A PRO 84 n 84 PRO 84 A ALA 85 n 85 ALA 85 A HIS 86 n 86 HIS 86 A VAL 87 n 87 VAL 87 A GLU 88 n 88 GLU 88 A PHE 89 n 89 PHE 89 A ALA 90 n 90 ALA 90 A THR 91 n 91 THR 91 A ILE 92 n 92 ILE 92 A PHE 93 n 93 PHE 93 A LEU 94 n 94 LEU 94 A GLY 95 n 95 GLY 95 A SER 96 n 96 SER 96 A LEU 97 n 97 LEU 97 A ASP 98 n 98 ASP 98 A LYS 99 n 99 LYS 99 A VAL 100 n 100 VAL 100 A LEU 101 n 101 LEU 101 A VAL 102 n 102 VAL 102 A ILE 103 n 103 ILE 103 A ASP 104 n 104 ASP 104 A TYR 105 n 105 TYR 105 A LYS 106 n 106 LYS 106 A PRO 107 n 107 PRO 107 A THR 108 n 108 THR 108 A SER 109 n 109 SER 109 A VAL 110 n 110 VAL 110 A SER 111 n 111 SER 111 A LEU 112 n 112 LEU 112 A author_and_software_defined_assembly PISA,PQS 2 dimeric 3380 -42 10440 A VAL 39 A O VAL 39 1_555 A MG 901 B MG MG 1_555 A ILE 42 A O ILE 42 1_555 89.6 A VAL 39 A O VAL 39 1_555 A MG 901 B MG MG 1_555 A MSE 45 A O MSE 45 1_555 95.9 A ILE 42 A O ILE 42 1_555 A MG 901 B MG MG 1_555 A MSE 45 A O MSE 45 1_555 97.3 A VAL 39 A O VAL 39 1_555 A MG 901 B MG MG 1_555 A HOH 7002 C O HOH 1_555 75.4 A ILE 42 A O ILE 42 1_555 A MG 901 B MG MG 1_555 A HOH 7002 C O HOH 1_555 93.4 A MSE 45 A O MSE 45 1_555 A MG 901 B MG MG 1_555 A HOH 7002 C O HOH 1_555 166.1 A VAL 39 A O VAL 39 1_555 A MG 901 B MG MG 1_555 A HOH 7001 C O HOH 1_555 99.9 A ILE 42 A O ILE 42 1_555 A MG 901 B MG MG 1_555 A HOH 7001 C O HOH 1_555 166.4 A MSE 45 A O MSE 45 1_555 A MG 901 B MG MG 1_555 A HOH 7001 C O HOH 1_555 91.4 A HOH 7002 C O HOH 1_555 A MG 901 B MG MG 1_555 A HOH 7001 C O HOH 1_555 79.8 A VAL 39 A O VAL 39 1_555 A MG 901 B MG MG 1_555 A GLU 43 A O GLU 43 1_555 166.1 A ILE 42 A O ILE 42 1_555 A MG 901 B MG MG 1_555 A GLU 43 A O GLU 43 1_555 78.6 A MSE 45 A O MSE 45 1_555 A MG 901 B MG MG 1_555 A GLU 43 A O GLU 43 1_555 92.9 A HOH 7002 C O HOH 1_555 A MG 901 B MG MG 1_555 A GLU 43 A O GLU 43 1_555 97.8 A HOH 7001 C O HOH 1_555 A MG 901 B MG MG 1_555 A GLU 43 A O GLU 43 1_555 90.6 A MSE 45 SELENOMETHIONINE A MSE 45 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 4_565 -x,-y+1,z crystal symmetry operation -27.7340000000 48.0366970971 0.0000000000 A N HIS 49 A N HIS 49 A O GLU 68 A O GLU 68 A O SER 69 A O SER 69 A N HIS 13 A N HIS 13 A N VAL 14 A N VAL 14 A O ILE 103 A O ILE 103 1 A GLY 1 A GLY 1 1 Y 1 A SER 2 A SER 2 1 Y 1 A HIS 3 A HIS 3 1 Y 1 A MSE 4 A MSE 4 1 Y 1 A GLU 5 A GLU 5 1 Y 1 A GLU 6 A GLU 6 1 Y 1 A ALA 7 A ALA 7 1 Y 1 A LYS 8 A LYS 8 1 Y 1 A GLY 9 A GLY 9 1 Y 1 A CA PRO 10 WRONG HAND 1 A A OE2 O GLU HOH 79 7067 1.97 1 15.91 2.60 112.10 128.01 A A A N CA C PRO PRO PRO 10 10 10 A N 21.214 -0.13 -0.07 0.00 -0.13 0.00 0.20 0.957 0.938 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2323 0.18217 0.18469 0.18469 1.90 20.00 369 7209 7209 4.9 94.76 4.331 0.123 RANDOM 1 THROUGHOUT 0.0 0.0 MAD 0.187 0.165 0.80 0.80 1.40 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.90 20.00 109 928 1 0 818 0.020 0.021 850 0.002 0.020 769 1.861 1.949 1153 1.025 3.000 1806 6.185 5.000 102 0.338 0.200 132 0.010 0.020 918 0.010 0.020 161 0.216 0.200 164 0.244 0.200 837 0.091 0.200 465 0.187 0.200 60 0.233 0.200 10 0.276 0.200 77 0.164 0.200 15 1.058 1.500 519 1.851 2.000 844 2.796 3.000 331 4.482 4.500 309 0.267 0.258 1.950 27 342 598 20 75.2 21.2 1.90 20.0 1Q4R 7570 2.0 0.042 1 35.6 10.1 98.30 0.303 1.90 1.97 2.06 598 1 2.9 75.2 data collection MAR345 data scaling SCALEPACK phasing SOLVE RESOLVE refinement REFMAC 5.1.24 phasing RESOLVE protein At3g17210 Gene Product of At3g17210 from Arabidopsis Thaliana 1 N N 2 N N 3 N N The second part of the biological assembly is generated by the two fold axis:-x, -y, z and a translation of 0 1 0 A SER 24 A SER 24 HELX_P A ASN 37 A ASN 37 1 1 14 A ASN 37 A ASN 37 HELX_P A ILE 42 A ILE 42 1 2 6 A SER 73 A SER 73 HELX_P A HIS 83 A HIS 83 1 3 11 A HIS 83 A HIS 83 HELX_P A SER 96 A SER 96 1 4 14 metalc 2.350 A VAL 39 A O VAL 39 1_555 A MG 901 B MG MG 1_555 metalc 2.129 A ILE 42 A O ILE 42 1_555 A MG 901 B MG MG 1_555 metalc 2.326 A MSE 45 A O MSE 45 1_555 A MG 901 B MG MG 1_555 metalc 2.487 A MG 901 B MG MG 1_555 A HOH 7002 C O HOH 1_555 metalc 2.132 A MG 901 B MG MG 1_555 A HOH 7001 C O HOH 1_555 covale 1.322 A PRO 44 A C PRO 44 1_555 A MSE 45 A N MSE 45 1_555 covale 1.329 A MSE 45 A C MSE 45 1_555 A LYS 46 A N LYS 46 1_555 metalc 2.905 A MG 901 B MG MG 1_555 A GLU 43 A O GLU 43 1_555 UNKNOWN FUNCTION, STRUCTURAL GENOMICS Arabidopsis Thaliana, Center for Eukaryotic Structural Genomics, Structural Genomics, Protein Structure Initiative, CESG, UNKNOWN FUNCTION POP3_ARATH UNP 1 1 Q9LUV2 MEEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAH PAHVEFATIFLGSLDKVLVIDYKPTSVSL 1 109 1Q4R 4 112 Q9LUV2 A 1 4 112 1 CLONING ARTIFACT GLY 1 1Q4R A Q9LUV2 UNP 1 1 CLONING ARTIFACT SER 2 1Q4R A Q9LUV2 UNP 2 1 CLONING ARTIFACT HIS 3 1Q4R A Q9LUV2 UNP 3 1 MET MODIFIED RESIDUE MSE 4 1Q4R A Q9LUV2 UNP 1 4 1 MET MODIFIED RESIDUE MSE 45 1Q4R A Q9LUV2 UNP 42 45 4 anti-parallel anti-parallel anti-parallel A ALA 47 A ALA 47 A LYS 52 A LYS 52 A HIS 65 A HIS 65 A PHE 71 A PHE 71 A VAL 11 A VAL 11 A PHE 19 A PHE 19 A LEU 97 A LEU 97 A TYR 105 A TYR 105 BINDING SITE FOR RESIDUE MG A 901 Software 6 A VAL 39 A VAL 39 6 1_555 A ILE 42 A ILE 42 6 1_555 A GLU 43 A GLU 43 6 1_555 A MSE 45 A MSE 45 6 1_555 A HOH 7001 C HOH 6 1_555 A HOH 7002 C HOH 6 1_555 171 hexagonal P 62