1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Mcdowell, J.A. He, L. Chen, X. Turner, D.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking US Biochemistry BICHAW 0033 0006-2960 36 8030 8038 10.1021/bi970122c 9201950 Investigation of the structural basis for thermodynamic stabilities of tandem GU wobble pairs: NMR structures of (rGGAGUUCC)2 and (rGGAUGUCC)2. 1997 10.2210/pdb1qet/pdb pdb_00001qet 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 ANTI-PARALLEL RNA DUPLEX, TANDEM GUANOSINE/ URIDINE MISMATCHES 2542.561 RNA (5'-R(*GP*GP*AP*UP*GP*UP*CP*C)-3') 2 syn polymer (RGGAUGUCC)2 no no GGAUGUCC GGAUGUCC A,B polyribonucleotide n n n n n n n n -7.323 1 19 A 1 B 16 -2.866 A_G1:C16_B 1 2.029 -0.155 -0.422 -0.117 4.772 1 19 A 2 B 15 -2.748 A_G2:C15_B 2 -0.932 -0.154 0.239 -0.102 -8.315 1 20 A 3 B 14 -0.112 A_A3:U14_B 3 -11.550 -0.283 -0.120 -0.124 -5.678 1 28 A 4 B 13 6.003 A_U4:G13_B 4 -3.417 1.931 0.545 -0.366 6.888 1 28 A 5 B 12 6.421 A_G5:U12_B 5 -2.568 -1.928 0.584 -0.369 9.560 1 20 A 6 B 11 0.020 A_U6:A11_B 6 -9.936 0.230 -0.109 -0.104 -5.449 1 19 A 7 B 10 -2.848 A_C7:G10_B 7 -2.614 0.310 0.228 -0.145 4.178 1 19 A 8 B 9 -2.623 A_C8:G9_B 8 1.636 0.215 -0.315 -0.119 2.849 29.392 A A 1 2 -0.321 B B 16 15 2.857 -0.162 -0.009 -2.116 AA_G1G2:C15C16_BB 1 -3.660 7.231 29.168 -4.141 -0.671 2.599 30.102 A A 2 3 17.085 B B 15 14 3.400 8.730 0.085 -2.277 AA_G2A3:U14C15_BB 2 3.622 -7.089 28.613 -6.065 0.533 2.433 43.838 A A 3 4 19.853 B B 14 13 3.059 14.562 0.811 -1.352 AA_A3U4:G13U14_BB 3 -2.005 2.733 41.415 -3.010 -1.252 0.363 16.672 A A 4 5 34.028 B B 13 12 2.186 9.306 0.010 -2.618 AA_U4G5:U12G13_BB 4 -0.476 1.741 13.841 -11.695 -0.172 2.382 44.103 A A 5 6 21.157 B B 12 11 3.062 15.571 -0.850 -1.360 AA_G5U6:A11U12_BB 5 2.041 -2.773 41.344 -3.073 1.297 2.507 31.935 A A 6 7 18.951 B B 11 10 3.407 10.240 -0.057 -2.304 AA_U6C7:G10A11_BB 6 -2.647 4.899 30.176 -5.917 -0.343 2.837 29.625 A A 7 8 1.116 B B 10 9 2.893 0.569 0.047 -2.188 AA_C7C8:G9G10_BB 7 3.545 -6.949 29.411 -4.385 0.567 database_2 pdbx_database_status pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Other 1 0 1997-06-05 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-03-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_nmr_software.name ENSEMBLE OF 30 STRUCTURES Y BNL 1997-03-04 REL REL 30 BIOSYM refinement Discover G 1 n 1 G 1 A G 2 n 2 G 2 A A 3 n 3 A 3 A U 4 n 4 U 4 A G 5 n 5 G 5 A U 6 n 6 U 6 A C 7 n 7 C 7 A C 8 n 8 C 8 A G 9 n 1 G 9 B G 10 n 2 G 10 B A 11 n 3 A 11 B U 12 n 4 U 12 B G 13 n 5 G 13 B U 14 n 6 U 14 B C 15 n 7 C 15 B C 16 n 8 C 16 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 refinement AMBER TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES 1 N N 1 N N hydrog WATSON-CRICK A G 1 A N1 G 1 1_555 B C 16 B N3 C 8 1_555 hydrog WATSON-CRICK A G 1 A N2 G 1 1_555 B C 16 B O2 C 8 1_555 hydrog WATSON-CRICK A G 1 A O6 G 1 1_555 B C 16 B N4 C 8 1_555 hydrog WATSON-CRICK A G 2 A N1 G 2 1_555 B C 15 B N3 C 7 1_555 hydrog WATSON-CRICK A G 2 A N2 G 2 1_555 B C 15 B O2 C 7 1_555 hydrog WATSON-CRICK A G 2 A O6 G 2 1_555 B C 15 B N4 C 7 1_555 hydrog WATSON-CRICK A A 3 A N1 A 3 1_555 B U 14 B N3 U 6 1_555 hydrog WATSON-CRICK A A 3 A N6 A 3 1_555 B U 14 B O4 U 6 1_555 hydrog TYPE_28_PAIR A U 4 A N3 U 4 1_555 B G 13 B O6 G 5 1_555 hydrog TYPE_28_PAIR A U 4 A O2 U 4 1_555 B G 13 B N1 G 5 1_555 hydrog TYPE_28_PAIR A G 5 A N1 G 5 1_555 B U 12 B O2 U 4 1_555 hydrog TYPE_28_PAIR A G 5 A O6 G 5 1_555 B U 12 B N3 U 4 1_555 hydrog WATSON-CRICK A U 6 A N3 U 6 1_555 B A 11 B N1 A 3 1_555 hydrog WATSON-CRICK A U 6 A O4 U 6 1_555 B A 11 B N6 A 3 1_555 hydrog WATSON-CRICK A C 7 A N3 C 7 1_555 B G 10 B N1 G 2 1_555 hydrog WATSON-CRICK A C 7 A N4 C 7 1_555 B G 10 B O6 G 2 1_555 hydrog WATSON-CRICK A C 7 A O2 C 7 1_555 B G 10 B N2 G 2 1_555 hydrog WATSON-CRICK A C 8 A N3 C 8 1_555 B G 9 B N1 G 1 1_555 hydrog WATSON-CRICK A C 8 A N4 C 8 1_555 B G 9 B O6 G 1 1_555 hydrog WATSON-CRICK A C 8 A O2 C 8 1_555 B G 9 B N2 G 1 1_555 RNA RIBONUCLEIC ACID, G:U MISMATCH, RNA 1QET PDB 1 1QET 1 8 1QET 1 8 1QET A 1 1 8 9 16 1QET 9 16 1QET B 1 1 8 1 P 1