1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Mcdowell, J.A.
He, L.
Chen, X.
Turner, D.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
US
Biochemistry
BICHAW
0033
0006-2960
36
8030
8038
10.1021/bi970122c
9201950
Investigation of the structural basis for thermodynamic stabilities of tandem GU wobble pairs: NMR structures of (rGGAGUUCC)2 and (rGGAUGUCC)2.
1997
10.2210/pdb1qet/pdb
pdb_00001qet
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
ANTI-PARALLEL RNA DUPLEX, TANDEM GUANOSINE/ URIDINE MISMATCHES
2542.561
RNA (5'-R(*GP*GP*AP*UP*GP*UP*CP*C)-3')
2
syn
polymer
(RGGAUGUCC)2
no
no
GGAUGUCC
GGAUGUCC
A,B
polyribonucleotide
n
n
n
n
n
n
n
n
-7.323
1
19
A
1
B
16
-2.866
A_G1:C16_B
1
2.029
-0.155
-0.422
-0.117
4.772
1
19
A
2
B
15
-2.748
A_G2:C15_B
2
-0.932
-0.154
0.239
-0.102
-8.315
1
20
A
3
B
14
-0.112
A_A3:U14_B
3
-11.550
-0.283
-0.120
-0.124
-5.678
1
28
A
4
B
13
6.003
A_U4:G13_B
4
-3.417
1.931
0.545
-0.366
6.888
1
28
A
5
B
12
6.421
A_G5:U12_B
5
-2.568
-1.928
0.584
-0.369
9.560
1
20
A
6
B
11
0.020
A_U6:A11_B
6
-9.936
0.230
-0.109
-0.104
-5.449
1
19
A
7
B
10
-2.848
A_C7:G10_B
7
-2.614
0.310
0.228
-0.145
4.178
1
19
A
8
B
9
-2.623
A_C8:G9_B
8
1.636
0.215
-0.315
-0.119
2.849
29.392
A
A
1
2
-0.321
B
B
16
15
2.857
-0.162
-0.009
-2.116
AA_G1G2:C15C16_BB
1
-3.660
7.231
29.168
-4.141
-0.671
2.599
30.102
A
A
2
3
17.085
B
B
15
14
3.400
8.730
0.085
-2.277
AA_G2A3:U14C15_BB
2
3.622
-7.089
28.613
-6.065
0.533
2.433
43.838
A
A
3
4
19.853
B
B
14
13
3.059
14.562
0.811
-1.352
AA_A3U4:G13U14_BB
3
-2.005
2.733
41.415
-3.010
-1.252
0.363
16.672
A
A
4
5
34.028
B
B
13
12
2.186
9.306
0.010
-2.618
AA_U4G5:U12G13_BB
4
-0.476
1.741
13.841
-11.695
-0.172
2.382
44.103
A
A
5
6
21.157
B
B
12
11
3.062
15.571
-0.850
-1.360
AA_G5U6:A11U12_BB
5
2.041
-2.773
41.344
-3.073
1.297
2.507
31.935
A
A
6
7
18.951
B
B
11
10
3.407
10.240
-0.057
-2.304
AA_U6C7:G10A11_BB
6
-2.647
4.899
30.176
-5.917
-0.343
2.837
29.625
A
A
7
8
1.116
B
B
10
9
2.893
0.569
0.047
-2.188
AA_C7C8:G9G10_BB
7
3.545
-6.949
29.411
-4.385
0.567
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1997-06-05
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_nmr_software.name
ENSEMBLE OF 30 STRUCTURES
Y
BNL
1997-03-04
REL
REL
30
BIOSYM
refinement
Discover
G
1
n
1
G
1
A
G
2
n
2
G
2
A
A
3
n
3
A
3
A
U
4
n
4
U
4
A
G
5
n
5
G
5
A
U
6
n
6
U
6
A
C
7
n
7
C
7
A
C
8
n
8
C
8
A
G
9
n
1
G
9
B
G
10
n
2
G
10
B
A
11
n
3
A
11
B
U
12
n
4
U
12
B
G
13
n
5
G
13
B
U
14
n
6
U
14
B
C
15
n
7
C
15
B
C
16
n
8
C
16
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
refinement
AMBER
TANDEM GU MISMATCHES IN RNA, NMR, 30 STRUCTURES
1
N
N
1
N
N
hydrog
WATSON-CRICK
A
G
1
A
N1
G
1
1_555
B
C
16
B
N3
C
8
1_555
hydrog
WATSON-CRICK
A
G
1
A
N2
G
1
1_555
B
C
16
B
O2
C
8
1_555
hydrog
WATSON-CRICK
A
G
1
A
O6
G
1
1_555
B
C
16
B
N4
C
8
1_555
hydrog
WATSON-CRICK
A
G
2
A
N1
G
2
1_555
B
C
15
B
N3
C
7
1_555
hydrog
WATSON-CRICK
A
G
2
A
N2
G
2
1_555
B
C
15
B
O2
C
7
1_555
hydrog
WATSON-CRICK
A
G
2
A
O6
G
2
1_555
B
C
15
B
N4
C
7
1_555
hydrog
WATSON-CRICK
A
A
3
A
N1
A
3
1_555
B
U
14
B
N3
U
6
1_555
hydrog
WATSON-CRICK
A
A
3
A
N6
A
3
1_555
B
U
14
B
O4
U
6
1_555
hydrog
TYPE_28_PAIR
A
U
4
A
N3
U
4
1_555
B
G
13
B
O6
G
5
1_555
hydrog
TYPE_28_PAIR
A
U
4
A
O2
U
4
1_555
B
G
13
B
N1
G
5
1_555
hydrog
TYPE_28_PAIR
A
G
5
A
N1
G
5
1_555
B
U
12
B
O2
U
4
1_555
hydrog
TYPE_28_PAIR
A
G
5
A
O6
G
5
1_555
B
U
12
B
N3
U
4
1_555
hydrog
WATSON-CRICK
A
U
6
A
N3
U
6
1_555
B
A
11
B
N1
A
3
1_555
hydrog
WATSON-CRICK
A
U
6
A
O4
U
6
1_555
B
A
11
B
N6
A
3
1_555
hydrog
WATSON-CRICK
A
C
7
A
N3
C
7
1_555
B
G
10
B
N1
G
2
1_555
hydrog
WATSON-CRICK
A
C
7
A
N4
C
7
1_555
B
G
10
B
O6
G
2
1_555
hydrog
WATSON-CRICK
A
C
7
A
O2
C
7
1_555
B
G
10
B
N2
G
2
1_555
hydrog
WATSON-CRICK
A
C
8
A
N3
C
8
1_555
B
G
9
B
N1
G
1
1_555
hydrog
WATSON-CRICK
A
C
8
A
N4
C
8
1_555
B
G
9
B
O6
G
1
1_555
hydrog
WATSON-CRICK
A
C
8
A
O2
C
8
1_555
B
G
9
B
N2
G
1
1_555
RNA
RIBONUCLEIC ACID, G:U MISMATCH, RNA
1QET
PDB
1
1QET
1
8
1QET
1
8
1QET
A
1
1
8
9
16
1QET
9
16
1QET
B
1
1
8
1
P 1