0.009209 0.005317 0.000000 0.000000 0.010633 0.000000 0.000000 0.000000 0.009037 0.00000 0.00000 0.00000 Huntington, J.A. Pannu, N.S. Hazes, B. Read, R.J. Lomas, D.A. Carrell, R.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 108.590 108.590 110.650 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 293 449 10.1006/JMBI.1999.3184 10543942 A 2.6A Structure of a Serpin Polymer and Implications for Conformational Disease 1999 10.2210/pdb1qmb/pdb pdb_00001qmb 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS CCD 1999-05-15 ADSC QUANTUM SI FILTER SINGLE WAVELENGTH M x-ray 1 0.9 1.0 PX9.6 SRS 0.9 SYNCHROTRON SRS BEAMLINE PX9.6 36623.742 ALPHA-1-ANTITRYPSIN RESIDUES 49-69,71-302,304-376 YES 1 man polymer 4762.651 ALPHA-1-ANTITRYPSIN RESIDUES 377-418 YES 1 man polymer 18.015 water 17 nat water ALPHA-1-PROTEINASE INHIBITOR, ALPHA-1-PI ALPHA-1-PROTEINASE INHIBITOR, ALPHA-1-PI no no KITPNLAEFAFSLYRQLAHQSSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAAIHEGFQELLRTLNQ PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALV NYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLEN ELTHDIITKFLENDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEKGTE AAGAMF KITPNLAEFAFSLYRQLAHQSSTNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEIPEAAIHEGFQELLRTLNQ PDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKELDRDTVFALV NYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLEN ELTHDIITKFLENDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEKGTE AAGAMF A polypeptide(L) no no LEAIPRSIPPEVKFNAPFVFLMIEQNTKSPLFMGKVVNPTQK LEAIPRSIPPEVKFNAPFVFLMIEQNTKSPLFMGKVVNPTQK B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 9606 HOMO SAPIENS 562 ESCHERICHIA COLI sample 9606 HOMO SAPIENS 562 ESCHERICHIA COLI 1 4.46 73 MOLECULAR REPLACEMENT WAS CONDUCTED IN THE ABSENCE OF S4A 8.50 0.2M TRI-SODIUM CITRATE, 0.1M TRIS, PH 8.5, 30% PEG 400 chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Data collection Database references Other Refinement description 1 0 2000-02-06 1 1 2011-05-08 1 2 2011-07-13 1 3 2023-12-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf MODIFIED ALPHA-1-ANTITRYPSIN / MODIFIED ALPHA-1-PROTEINASE INHIBITOR (TETRAGONAL FORM 1) MODIFIED ALPHA-1-ANTITRYPSIN / MODIFIED ALPHA-1-PROTEINASE INHIBITOR (HEXAGONAL) MODIFIED ALPHA-1-ANTITRYPSIN / MODIFIED ALPHA-1-PROTEINASE INHIBITOR (TETRAGONAL FORM 2) INTACT RECOMBINED ALPHA-1-ANTITRYPSIN MUTANT PHE 51 TO LEU INTACT WILDTYPE RECOMBINANT ALPHA-1-ANTITRYPSIN ALPHA1-ANTITRYPSIN UNCLEAVED ALPHA-1-ANTITRYPSIN PDBE Y PDBE 1999-09-24 REL REL HOH water CRYSTAL TRIALS WERE SET UP FOR S195A THROMBIN AND M358R ALPHA-1-ANTITRYPSIN. THE CRYSTALS CONTAINED ONLY P7-P6 CLEAVED ALPHA-1-ANTITRYPSIN AND THE REMAINING MOTHERLIQOUR WAS PREDOMINANTLY S195A THROMBIN. PREVIOUSLY UNIDENTIFIED CLEAVAGE SITE CHAIN BREAK SER 45 A --- SER 47 A MISSING RESIDUE ASN 46 A CHAIN BREAK ASN 278 A --- ASP 280 A MISSING RESIDUE GLU 279 A 7API PDB ETRY 7API PDB experimental model HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2001 3 HOH HOH 2001 B LYS 25 n 1 LYS 25 A ILE 26 n 2 ILE 26 A THR 27 n 3 THR 27 A PRO 28 n 4 PRO 28 A ASN 29 n 5 ASN 29 A LEU 30 n 6 LEU 30 A ALA 31 n 7 ALA 31 A GLU 32 n 8 GLU 32 A PHE 33 n 9 PHE 33 A ALA 34 n 10 ALA 34 A PHE 35 n 11 PHE 35 A SER 36 n 12 SER 36 A LEU 37 n 13 LEU 37 A TYR 38 n 14 TYR 38 A ARG 39 n 15 ARG 39 A GLN 40 n 16 GLN 40 A LEU 41 n 17 LEU 41 A ALA 42 n 18 ALA 42 A HIS 43 n 19 HIS 43 A GLN 44 n 20 GLN 44 A SER 45 n 21 SER 45 A SER 47 n 22 SER 47 A THR 48 n 23 THR 48 A ASN 49 n 24 ASN 49 A ILE 50 n 25 ILE 50 A PHE 51 n 26 PHE 51 A PHE 52 n 27 PHE 52 A SER 53 n 28 SER 53 A PRO 54 n 29 PRO 54 A VAL 55 n 30 VAL 55 A SER 56 n 31 SER 56 A ILE 57 n 32 ILE 57 A ALA 58 n 33 ALA 58 A THR 59 n 34 THR 59 A ALA 60 n 35 ALA 60 A PHE 61 n 36 PHE 61 A ALA 62 n 37 ALA 62 A MET 63 n 38 MET 63 A LEU 64 n 39 LEU 64 A SER 65 n 40 SER 65 A LEU 66 n 41 LEU 66 A GLY 67 n 42 GLY 67 A THR 68 n 43 THR 68 A LYS 69 n 44 LYS 69 A ALA 70 n 45 ALA 70 A ASP 71 n 46 ASP 71 A THR 72 n 47 THR 72 A HIS 73 n 48 HIS 73 A ASP 74 n 49 ASP 74 A GLU 75 n 50 GLU 75 A ILE 76 n 51 ILE 76 A LEU 77 n 52 LEU 77 A GLU 78 n 53 GLU 78 A GLY 79 n 54 GLY 79 A LEU 80 n 55 LEU 80 A ASN 81 n 56 ASN 81 A PHE 82 n 57 PHE 82 A ASN 83 n 58 ASN 83 A LEU 84 n 59 LEU 84 A THR 85 n 60 THR 85 A GLU 86 n 61 GLU 86 A ILE 87 n 62 ILE 87 A PRO 88 n 63 PRO 88 A GLU 89 n 64 GLU 89 A ALA 90 n 65 ALA 90 A ALA 91 n 66 ALA 91 A ILE 92 n 67 ILE 92 A HIS 93 n 68 HIS 93 A GLU 94 n 69 GLU 94 A GLY 95 n 70 GLY 95 A PHE 96 n 71 PHE 96 A GLN 97 n 72 GLN 97 A GLU 98 n 73 GLU 98 A LEU 99 n 74 LEU 99 A LEU 100 n 75 LEU 100 A ARG 101 n 76 ARG 101 A THR 102 n 77 THR 102 A LEU 103 n 78 LEU 103 A ASN 104 n 79 ASN 104 A GLN 105 n 80 GLN 105 A PRO 106 n 81 PRO 106 A ASP 107 n 82 ASP 107 A SER 108 n 83 SER 108 A GLN 109 n 84 GLN 109 A LEU 110 n 85 LEU 110 A GLN 111 n 86 GLN 111 A LEU 112 n 87 LEU 112 A THR 113 n 88 THR 113 A THR 114 n 89 THR 114 A GLY 115 n 90 GLY 115 A ASN 116 n 91 ASN 116 A GLY 117 n 92 GLY 117 A LEU 118 n 93 LEU 118 A PHE 119 n 94 PHE 119 A LEU 120 n 95 LEU 120 A SER 121 n 96 SER 121 A GLU 122 n 97 GLU 122 A GLY 123 n 98 GLY 123 A LEU 124 n 99 LEU 124 A LYS 125 n 100 LYS 125 A LEU 126 n 101 LEU 126 A VAL 127 n 102 VAL 127 A ASP 128 n 103 ASP 128 A LYS 129 n 104 LYS 129 A PHE 130 n 105 PHE 130 A LEU 131 n 106 LEU 131 A GLU 132 n 107 GLU 132 A ASP 133 n 108 ASP 133 A VAL 134 n 109 VAL 134 A LYS 135 n 110 LYS 135 A LYS 136 n 111 LYS 136 A LEU 137 n 112 LEU 137 A TYR 138 n 113 TYR 138 A HIS 139 n 114 HIS 139 A SER 140 n 115 SER 140 A GLU 141 n 116 GLU 141 A ALA 142 n 117 ALA 142 A PHE 143 n 118 PHE 143 A THR 144 n 119 THR 144 A VAL 145 n 120 VAL 145 A ASN 146 n 121 ASN 146 A PHE 147 n 122 PHE 147 A GLY 148 n 123 GLY 148 A ASP 149 n 124 ASP 149 A THR 150 n 125 THR 150 A GLU 151 n 126 GLU 151 A GLU 152 n 127 GLU 152 A ALA 153 n 128 ALA 153 A LYS 154 n 129 LYS 154 A LYS 155 n 130 LYS 155 A GLN 156 n 131 GLN 156 A ILE 157 n 132 ILE 157 A ASN 158 n 133 ASN 158 A ASP 159 n 134 ASP 159 A TYR 160 n 135 TYR 160 A VAL 161 n 136 VAL 161 A GLU 162 n 137 GLU 162 A LYS 163 n 138 LYS 163 A GLY 164 n 139 GLY 164 A THR 165 n 140 THR 165 A GLN 166 n 141 GLN 166 A GLY 167 n 142 GLY 167 A LYS 168 n 143 LYS 168 A ILE 169 n 144 ILE 169 A VAL 170 n 145 VAL 170 A ASP 171 n 146 ASP 171 A LEU 172 n 147 LEU 172 A VAL 173 n 148 VAL 173 A LYS 174 n 149 LYS 174 A GLU 175 n 150 GLU 175 A LEU 176 n 151 LEU 176 A ASP 177 n 152 ASP 177 A ARG 178 n 153 ARG 178 A ASP 179 n 154 ASP 179 A THR 180 n 155 THR 180 A VAL 181 n 156 VAL 181 A PHE 182 n 157 PHE 182 A ALA 183 n 158 ALA 183 A LEU 184 n 159 LEU 184 A VAL 185 n 160 VAL 185 A ASN 186 n 161 ASN 186 A TYR 187 n 162 TYR 187 A ILE 188 n 163 ILE 188 A PHE 189 n 164 PHE 189 A PHE 190 n 165 PHE 190 A LYS 191 n 166 LYS 191 A GLY 192 n 167 GLY 192 A LYS 193 n 168 LYS 193 A TRP 194 n 169 TRP 194 A GLU 195 n 170 GLU 195 A ARG 196 n 171 ARG 196 A PRO 197 n 172 PRO 197 A PHE 198 n 173 PHE 198 A GLU 199 n 174 GLU 199 A VAL 200 n 175 VAL 200 A LYS 201 n 176 LYS 201 A ASP 202 n 177 ASP 202 A THR 203 n 178 THR 203 A GLU 204 n 179 GLU 204 A GLU 205 n 180 GLU 205 A GLU 206 n 181 GLU 206 A ASP 207 n 182 ASP 207 A PHE 208 n 183 PHE 208 A HIS 209 n 184 HIS 209 A VAL 210 n 185 VAL 210 A ASP 211 n 186 ASP 211 A GLN 212 n 187 GLN 212 A VAL 213 n 188 VAL 213 A THR 214 n 189 THR 214 A THR 215 n 190 THR 215 A VAL 216 n 191 VAL 216 A LYS 217 n 192 LYS 217 A VAL 218 n 193 VAL 218 A PRO 219 n 194 PRO 219 A MET 220 n 195 MET 220 A MET 221 n 196 MET 221 A LYS 222 n 197 LYS 222 A ARG 223 n 198 ARG 223 A LEU 224 n 199 LEU 224 A GLY 225 n 200 GLY 225 A MET 226 n 201 MET 226 A PHE 227 n 202 PHE 227 A ASN 228 n 203 ASN 228 A ILE 229 n 204 ILE 229 A GLN 230 n 205 GLN 230 A HIS 231 n 206 HIS 231 A CYS 232 n 207 CYS 232 A LYS 233 n 208 LYS 233 A LYS 234 n 209 LYS 234 A LEU 235 n 210 LEU 235 A SER 236 n 211 SER 236 A SER 237 n 212 SER 237 A TRP 238 n 213 TRP 238 A VAL 239 n 214 VAL 239 A LEU 240 n 215 LEU 240 A LEU 241 n 216 LEU 241 A MET 242 n 217 MET 242 A LYS 243 n 218 LYS 243 A TYR 244 n 219 TYR 244 A LEU 245 n 220 LEU 245 A GLY 246 n 221 GLY 246 A ASN 247 n 222 ASN 247 A ALA 248 n 223 ALA 248 A THR 249 n 224 THR 249 A ALA 250 n 225 ALA 250 A ILE 251 n 226 ILE 251 A PHE 252 n 227 PHE 252 A PHE 253 n 228 PHE 253 A LEU 254 n 229 LEU 254 A PRO 255 n 230 PRO 255 A ASP 256 n 231 ASP 256 A GLU 257 n 232 GLU 257 A GLY 258 n 233 GLY 258 A LYS 259 n 234 LYS 259 A LEU 260 n 235 LEU 260 A GLN 261 n 236 GLN 261 A HIS 262 n 237 HIS 262 A LEU 263 n 238 LEU 263 A GLU 264 n 239 GLU 264 A ASN 265 n 240 ASN 265 A GLU 266 n 241 GLU 266 A LEU 267 n 242 LEU 267 A THR 268 n 243 THR 268 A HIS 269 n 244 HIS 269 A ASP 270 n 245 ASP 270 A ILE 271 n 246 ILE 271 A ILE 272 n 247 ILE 272 A THR 273 n 248 THR 273 A LYS 274 n 249 LYS 274 A PHE 275 n 250 PHE 275 A LEU 276 n 251 LEU 276 A GLU 277 n 252 GLU 277 A ASN 278 n 253 ASN 278 A ASP 280 n 254 ASP 280 A ARG 281 n 255 ARG 281 A ARG 282 n 256 ARG 282 A SER 283 n 257 SER 283 A ALA 284 n 258 ALA 284 A SER 285 n 259 SER 285 A LEU 286 n 260 LEU 286 A HIS 287 n 261 HIS 287 A LEU 288 n 262 LEU 288 A PRO 289 n 263 PRO 289 A LYS 290 n 264 LYS 290 A LEU 291 n 265 LEU 291 A SER 292 n 266 SER 292 A ILE 293 n 267 ILE 293 A THR 294 n 268 THR 294 A GLY 295 n 269 GLY 295 A THR 296 n 270 THR 296 A TYR 297 n 271 TYR 297 A ASP 298 n 272 ASP 298 A LEU 299 n 273 LEU 299 A LYS 300 n 274 LYS 300 A SER 301 n 275 SER 301 A VAL 302 n 276 VAL 302 A LEU 303 n 277 LEU 303 A GLY 304 n 278 GLY 304 A GLN 305 n 279 GLN 305 A LEU 306 n 280 LEU 306 A GLY 307 n 281 GLY 307 A ILE 308 n 282 ILE 308 A THR 309 n 283 THR 309 A LYS 310 n 284 LYS 310 A VAL 311 n 285 VAL 311 A PHE 312 n 286 PHE 312 A SER 313 n 287 SER 313 A ASN 314 n 288 ASN 314 A GLY 315 n 289 GLY 315 A ALA 316 n 290 ALA 316 A ASP 317 n 291 ASP 317 A LEU 318 n 292 LEU 318 A SER 319 n 293 SER 319 A GLY 320 n 294 GLY 320 A VAL 321 n 295 VAL 321 A THR 322 n 296 THR 322 A GLU 323 n 297 GLU 323 A GLU 324 n 298 GLU 324 A ALA 325 n 299 ALA 325 A PRO 326 n 300 PRO 326 A LEU 327 n 301 LEU 327 A LYS 328 n 302 LYS 328 A LEU 329 n 303 LEU 329 A SER 330 n 304 SER 330 A LYS 331 n 305 LYS 331 A ALA 332 n 306 ALA 332 A VAL 333 n 307 VAL 333 A HIS 334 n 308 HIS 334 A LYS 335 n 309 LYS 335 A ALA 336 n 310 ALA 336 A VAL 337 n 311 VAL 337 A LEU 338 n 312 LEU 338 A THR 339 n 313 THR 339 A ILE 340 n 314 ILE 340 A ASP 341 n 315 ASP 341 A GLU 342 n 316 GLU 342 A LYS 343 n 317 LYS 343 A GLY 344 n 318 GLY 344 A THR 345 n 319 THR 345 A GLU 346 n 320 GLU 346 A ALA 347 n 321 ALA 347 A ALA 348 n 322 ALA 348 A GLY 349 n 323 GLY 349 A ALA 350 n 324 ALA 350 A MET 351 n 325 MET 351 A PHE 352 n 326 PHE 352 A LEU 353 n 1 LEU 353 B GLU 354 n 2 GLU 354 B ALA 355 n 3 ALA 355 B ILE 356 n 4 ILE 356 B PRO 357 n 5 PRO 357 B ARG 358 n 6 ARG 358 B SER 359 n 7 SER 359 B ILE 360 n 8 ILE 360 B PRO 361 n 9 PRO 361 B PRO 362 n 10 PRO 362 B GLU 363 n 11 GLU 363 B VAL 364 n 12 VAL 364 B LYS 365 n 13 LYS 365 B PHE 366 n 14 PHE 366 B ASN 367 n 15 ASN 367 B ALA 368 n 16 ALA 368 B PRO 369 n 17 PRO 369 B PHE 370 n 18 PHE 370 B VAL 371 n 19 VAL 371 B PHE 372 n 20 PHE 372 B LEU 373 n 21 LEU 373 B MET 374 n 22 MET 374 B ILE 375 n 23 ILE 375 B GLU 376 n 24 GLU 376 B GLN 377 n 25 GLN 377 B ASN 378 n 26 ASN 378 B THR 379 n 27 THR 379 B LYS 380 n 28 LYS 380 B SER 381 n 29 SER 381 B PRO 382 n 30 PRO 382 B LEU 383 n 31 LEU 383 B PHE 384 n 32 PHE 384 B MET 385 n 33 MET 385 B GLY 386 n 34 GLY 386 B LYS 387 n 35 LYS 387 B VAL 388 n 36 VAL 388 B VAL 389 n 37 VAL 389 B ASN 390 n 38 ASN 390 B PRO 391 n 39 PRO 391 B THR 392 n 40 THR 392 B GLN 393 n 41 GLN 393 B LYS 394 n 42 LYS 394 B software_defined_assembly PQS 2 dimeric 5250 -51.6 19810 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 141 A O GLU 116 A N LEU 118 A N LEU 93 A O GLN 111 A O GLN 86 A N LYS 191 A N LYS 166 A O ASN 186 A O ASN 161 A N MET 351 A N MET 325 A O GLU 346 A O GLU 320 A N THR 339 A N THR 313 A O HIS 334 A O HIS 308 A N TYR 297 A N TYR 271 A O ARG 282 A O ARG 256 A N PHE 227 A N PHE 202 A O THR 214 A O THR 189 A N ASP 211 A N ASP 186 A O GLN 230 A O GLN 205 A N VAL 239 A N VAL 214 A O TRP 238 A O TRP 213 A N LEU 254 A N LEU 229 B O PHE 370 B O PHE 18 B N VAL 388 B N VAL 36 1 A CG LYS 125 A CG LYS 100 1 Y 1 A CD LYS 125 A CD LYS 100 1 Y 1 A CE LYS 125 A CE LYS 100 1 Y 1 A NZ LYS 125 A NZ LYS 100 1 Y 1 A CG LYS 155 A CG LYS 130 1 Y 1 A CD LYS 155 A CD LYS 130 1 Y 1 A CE LYS 155 A CE LYS 130 1 Y 1 A NZ LYS 155 A NZ LYS 130 1 Y 1 A CG ARG 178 A CG ARG 153 1 Y 1 A CD ARG 178 A CD ARG 153 1 Y 1 A NE ARG 178 A NE ARG 153 1 Y 1 A CZ ARG 178 A CZ ARG 153 1 Y 1 A NH1 ARG 178 A NH1 ARG 153 1 Y 1 A NH2 ARG 178 A NH2 ARG 153 1 Y 1 A CG ARG 196 A CG ARG 171 1 Y 1 A CD ARG 196 A CD ARG 171 1 Y 1 A NE ARG 196 A NE ARG 171 1 Y 1 A CZ ARG 196 A CZ ARG 171 1 Y 1 A NH1 ARG 196 A NH1 ARG 171 1 Y 1 A NH2 ARG 196 A NH2 ARG 171 1 Y 1 A CG LYS 233 A CG LYS 208 1 Y 1 A CD LYS 233 A CD LYS 208 1 Y 1 A CE LYS 233 A CE LYS 208 1 Y 1 A NZ LYS 233 A NZ LYS 208 1 Y 1 A CG LYS 234 A CG LYS 209 1 Y 1 A CD LYS 234 A CD LYS 209 1 Y 1 A CE LYS 234 A CE LYS 209 1 Y 1 A NZ LYS 234 A NZ LYS 209 1 Y 1 A CG LYS 274 A CG LYS 249 1 Y 1 A CD LYS 274 A CD LYS 249 1 Y 1 A CE LYS 274 A CE LYS 249 1 Y 1 A NZ LYS 274 A NZ LYS 249 1 Y 1 A CG ASP 280 A CG ASP 254 1 Y 1 A OD1 ASP 280 A OD1 ASP 254 1 Y 1 A OD2 ASP 280 A OD2 ASP 254 1 Y 1 B CG LYS 365 B CG LYS 13 1 Y 1 B CD LYS 365 B CD LYS 13 1 Y 1 B CE LYS 365 B CE LYS 13 1 Y 1 B NZ LYS 365 B NZ LYS 13 1 Y 1 B CG LYS 380 B CG LYS 28 1 Y 1 B CD LYS 380 B CD LYS 28 1 Y 1 B CE LYS 380 B CE LYS 28 1 Y 1 B NZ LYS 380 B NZ LYS 28 1 Y 1 A A C N SER SER 45 47 3.75 1 A A C N ASN ASP 278 280 2.94 1 A ALA 70 51.90 -139.00 1 A HIS 73 -70.10 -70.14 1 A GLU 86 129.86 -73.12 1 A ASP 107 -80.03 44.44 1 A SER 108 55.27 -47.90 1 A LEU 126 -62.73 -174.34 1 A ASP 128 -16.85 -60.83 1 A GLN 166 36.63 41.96 1 A VAL 170 -67.20 -111.90 1 A ARG 196 -152.38 77.25 1 A PRO 197 -55.64 173.31 1 A VAL 213 -152.09 31.95 1 A GLU 257 -32.04 124.06 1 A LYS 259 -150.33 10.29 1 A LEU 299 -59.34 3.07 1 A THR 309 -130.49 -39.24 1 A GLU 324 -45.86 -104.26 1 A LYS 331 179.21 165.60 1 A ASP 341 -123.65 -162.75 1 B ARG 358 -93.02 -135.84 1 B SER 359 -162.85 -10.06 1 B ILE 360 45.70 80.79 1 B ASN 390 -164.09 98.58 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 69.7 0.06 -4.68 0.00 0.06 0.00 -0.12 0.258 0.009 0.212 0.212 2.60 27.27 875 17423 5.0 73.8 RANDOM 1038103.31 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ETRY 7API FLAT MODEL 50.9487 0.321472 0.41 0.43 5.00 0.73 0.81 2.60 27.27 17 2890 0 0 2873 0.005 1.2 23.6 0.59 4.00 1.50 6.25 2.00 8.74 2.00 11.86 2.50 0.373 0.073 0.409 2.73 26 501 6 4.9 13.2 58.0 2.570 27.270 1QMB 17423 0.20900 0.18300 1 13.7300 3.900 71.5 1.00000 2.57 2.71 0.300 1.00000 1 1.60 12.5 refinement CNS 0.9 data reduction MOSFLM data scaling SCALA phasing CNS 0.9 Cleaved alpha-1-antitrypsin polymer 1 N N 2 N N 3 N N 3 N N A ILE 26 A ILE 2 HELX_P A SER 45 A SER 21 1 1 20 A SER 53 A SER 28 HELX_P A SER 65 A SER 40 1 2 13 A LEU 66 A LEU 41 HELX_P A THR 68 A THR 43 5 3 3 A LYS 69 A LYS 44 HELX_P A LEU 80 A LEU 55 1 4 12 A PRO 88 A PRO 63 HELX_P A ASN 104 A ASN 79 1 5 17 A VAL 127 A VAL 102 HELX_P A TYR 138 A TYR 113 1 6 12 A ASP 149 A ASP 124 HELX_P A THR 165 A THR 140 1 7 17 A LYS 259 A LYS 234 HELX_P A GLU 266 A GLU 241 1 8 8 A THR 268 A THR 243 HELX_P A ASN 278 A ASN 253 1 9 11 A LEU 299 A LEU 273 HELX_P A GLN 305 A GLN 279 1 10 7 A THR 309 A THR 283 HELX_P A SER 313 A SER 287 5 11 5 SERINE PROTEASE INHIBITOR SERINE PROTEASE INHIBITOR, SERPIN, ANTITRYPSIN, POLYMER, CLEAVED A1AT_HUMAN UNP 1 P01009 A1AT_HUMAN UNP 2 P01009 49 69 1QMB 25 45 P01009 A 1 1 21 71 302 1QMB 47 278 P01009 A 1 22 253 304 376 1QMB 280 352 P01009 A 1 254 326 377 418 1QMB 353 394 P01009 B 2 1 42 1 GLN conflict ALA 91 1QMB A P01009 UNP 115 66 4 MET engineered mutation ARG 358 1QMB B P01009 UNP 382 6 4 LYS conflict ALA 368 1QMB B P01009 UNP 392 16 6 3 3 2 parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 141 A GLU 116 A VAL 145 A VAL 120 A GLN 111 A GLN 86 A SER 121 A SER 96 A PHE 182 A PHE 157 A LYS 193 A LYS 168 A GLY 344 A GLY 318 A PHE 352 A PHE 326 A VAL 333 A VAL 307 A ILE 340 A ILE 314 A LEU 291 A LEU 265 A ASP 298 A ASP 272 A ARG 282 A ARG 256 A PRO 289 A PRO 263 A THR 214 A THR 189 A PHE 227 A PHE 202 A GLU 204 A GLU 179 A ASP 211 A ASP 186 A GLN 230 A GLN 205 A CYS 232 A CYS 207 A SER 237 A SER 212 A TYR 244 A TYR 219 A ALA 248 A ALA 223 A PRO 255 A PRO 230 B PHE 370 B PHE 18 B GLU 376 B GLU 24 B SER 381 B SER 29 B VAL 388 B VAL 36 152 P 31 2 1