0.012664
0.000000
0.000000
0.000000
0.010314
0.000000
0.000000
0.000000
0.010069
0.00000
0.00000
0.00000
Tormo, J.
Mariuzza, R.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
78.963
96.957
99.318
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
N
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
sing
Y
335
N
doub
N
336
N
sing
Y
337
N
doub
N
338
N
sing
Y
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
UK
Nature
NATUAS
0006
0028-0836
402
623
10.1038/45170
10604468
Crystal Structure of a Lectin-Like Natural Killer Cell Receptor Bound to its Mhc Class I Ligand
1999
US
Immunity
IUNIEH
2048
1074-7613
11
591
10.1016/S1074-7613(00)80134-X
10591184
Interaction of the Nk Cell Inhibitory Receptor Ly49A with H-2Dd: Identification of a Site Distinct from the Tcr Site.
1999
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
283
179
10.1006/JMBI.1998.2091
9761682
Three-Dimensional Structure of H-2Dd Complexed with an Immunodominant Peptide from Human Immunodeficiency Virus Envelope Glycoprotein 120
1999
10.2210/pdb1qo3/pdb
pdb_00001qo3
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
1999-04-15
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
14-ID-B
APS
1.0
SYNCHROTRON
APS BEAMLINE 14-ID-B
32265.902
MHC CLASS I H-2DD HEAVY CHAIN
EXTRACELLULAR DOMAIN
1
man
polymer
11791.545
BETA-2-MICROGLOBULIN
1
man
polymer
15921.329
LY49A
C-TYPE LECTIN-LIKE DOMAIN
2
man
polymer
1075.265
HIV ENVELOPE GLYCOPROTEIN 120 PEPTIDE
RESIDUES 318-327
YES
1
syn
polymer
62.068
1,2-ETHANEDIOL
3
syn
non-polymer
18.015
water
352
nat
water
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-D ALPHA CHAIN, (H-2D(D))
B2M
NK-CELL SURFACE GLYCOPROTEIN YE1/48, T LYMPHOCYTE ANTIGEN A1, LY49-A ANTIGEN, LY49A
no
no
MSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRT
ALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYL
EGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGT
FQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKE
MSHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRT
ALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYL
EGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGT
FQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWGKE
A
polypeptide(L)
no
no
MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYA
CRVKHASMAEPKTVYWDRDM
MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYA
CRVKHASMAEPKTVYWDRDM
B
polypeptide(L)
no
no
STVLDSLQHTGRGDKVYWFCYGMKCYYFVMDRKTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVVPSDSCWVGLSYDNKK
KDWAWIDNRPSKLALNTRKYNIRDGGCMLLSKTRLDNGNCDQVFICICGKRLDKFPH
STVLDSLQHTGRGDKVYWFCYGMKCYYFVMDRKTWSGCKQTCQSSSLSLLKIDDEDELKFLQLVVPSDSCWVGLSYDNKK
KDWAWIDNRPSKLALNTRKYNIRDGGCMLLSKTRLDNGNCDQVFICICGKRLDKFPH
C,D
polypeptide(L)
no
no
RGPGRAFVTI
RGPGRAFVTI
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MOUSE
BALB/C
sample
MOST NUCLEATED CELLS
CELL SURFACE
H-2D
10090
MUS MUSCULUS
INCLUSION BODY
469008
ESCHERICHIA COLI
BL21(DE3)
PET3A
MOUSE
C57BL/6
sample
MOST NUCLEATED CELLS
CELL SURFACE
10090
MUS MUSCULUS
INCLUSION BODY
469008
ESCHERICHIA COLI
BL21(DE3)
PET21D
MOUSE
C57BL/6
sample
NATURAL KILLER CELLS SOME T CELLS
CELL SURFACE
10090
MUS MUSCULUS
INCLUSION BODY
469008
ESCHERICHIA COLI
BL21(DE3)
PET21A
1
2.5
50
6.50
pH 6.50
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Structure summary
Version format compliance
Database references
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2000-01-02
1
1
2013-01-23
1
2
2015-04-15
1
3
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBE
Y
PDBE
1999-11-01
REL
REL
1
B
O
HOH
2025
5.87
EDO
1,2-ETHANEDIOL
HOH
water
12721
HIV
HUMAN IMMUNODEFICIENCY VIRUS
sample
NATURAL VARIANTS ARISE FROM STRAIN C57BL/6
1B6E
PDB ENTRIES 1B6E, 1DDH
PDB
experimental model
1DDH
PDB ENTRIES 1B6E, 1DDH
PDB
experimental model
EDO
1276
5
EDO
EDO
1276
A
EDO
1277
5
EDO
EDO
1277
A
EDO
1278
5
EDO
EDO
1278
A
HOH
2001
6
HOH
HOH
2001
A
HOH
2002
6
HOH
HOH
2002
A
HOH
2003
6
HOH
HOH
2003
A
HOH
2004
6
HOH
HOH
2004
A
HOH
2005
6
HOH
HOH
2005
A
HOH
2006
6
HOH
HOH
2006
A
HOH
2007
6
HOH
HOH
2007
A
HOH
2008
6
HOH
HOH
2008
A
HOH
2009
6
HOH
HOH
2009
A
HOH
2010
6
HOH
HOH
2010
A
HOH
2011
6
HOH
HOH
2011
A
HOH
2012
6
HOH
HOH
2012
A
HOH
2013
6
HOH
HOH
2013
A
HOH
2014
6
HOH
HOH
2014
A
HOH
2015
6
HOH
HOH
2015
A
HOH
2016
6
HOH
HOH
2016
A
HOH
2017
6
HOH
HOH
2017
A
HOH
2018
6
HOH
HOH
2018
A
HOH
2019
6
HOH
HOH
2019
A
HOH
2020
6
HOH
HOH
2020
A
HOH
2021
6
HOH
HOH
2021
A
HOH
2022
6
HOH
HOH
2022
A
HOH
2023
6
HOH
HOH
2023
A
HOH
2024
6
HOH
HOH
2024
A
HOH
2025
6
HOH
HOH
2025
A
HOH
2026
6
HOH
HOH
2026
A
HOH
2027
6
HOH
HOH
2027
A
HOH
2028
6
HOH
HOH
2028
A
HOH
2029
6
HOH
HOH
2029
A
HOH
2030
6
HOH
HOH
2030
A
HOH
2031
6
HOH
HOH
2031
A
HOH
2032
6
HOH
HOH
2032
A
HOH
2033
6
HOH
HOH
2033
A
HOH
2034
6
HOH
HOH
2034
A
HOH
2035
6
HOH
HOH
2035
A
HOH
2036
6
HOH
HOH
2036
A
HOH
2037
6
HOH
HOH
2037
A
HOH
2038
6
HOH
HOH
2038
A
HOH
2039
6
HOH
HOH
2039
A
HOH
2040
6
HOH
HOH
2040
A
HOH
2041
6
HOH
HOH
2041
A
HOH
2042
6
HOH
HOH
2042
A
HOH
2043
6
HOH
HOH
2043
A
HOH
2044
6
HOH
HOH
2044
A
HOH
2045
6
HOH
HOH
2045
A
HOH
2046
6
HOH
HOH
2046
A
HOH
2047
6
HOH
HOH
2047
A
HOH
2048
6
HOH
HOH
2048
A
HOH
2049
6
HOH
HOH
2049
A
HOH
2050
6
HOH
HOH
2050
A
HOH
2051
6
HOH
HOH
2051
A
HOH
2052
6
HOH
HOH
2052
A
HOH
2053
6
HOH
HOH
2053
A
HOH
2054
6
HOH
HOH
2054
A
HOH
2055
6
HOH
HOH
2055
A
HOH
2056
6
HOH
HOH
2056
A
HOH
2057
6
HOH
HOH
2057
A
HOH
2058
6
HOH
HOH
2058
A
HOH
2059
6
HOH
HOH
2059
A
HOH
2060
6
HOH
HOH
2060
A
HOH
2061
6
HOH
HOH
2061
A
HOH
2062
6
HOH
HOH
2062
A
HOH
2063
6
HOH
HOH
2063
A
HOH
2064
6
HOH
HOH
2064
A
HOH
2065
6
HOH
HOH
2065
A
HOH
2066
6
HOH
HOH
2066
A
HOH
2067
6
HOH
HOH
2067
A
HOH
2068
6
HOH
HOH
2068
A
HOH
2069
6
HOH
HOH
2069
A
HOH
2070
6
HOH
HOH
2070
A
HOH
2071
6
HOH
HOH
2071
A
HOH
2072
6
HOH
HOH
2072
A
HOH
2073
6
HOH
HOH
2073
A
HOH
2074
6
HOH
HOH
2074
A
HOH
2075
6
HOH
HOH
2075
A
HOH
2076
6
HOH
HOH
2076
A
HOH
2077
6
HOH
HOH
2077
A
HOH
2078
6
HOH
HOH
2078
A
HOH
2079
6
HOH
HOH
2079
A
HOH
2080
6
HOH
HOH
2080
A
HOH
2081
6
HOH
HOH
2081
A
HOH
2082
6
HOH
HOH
2082
A
HOH
2083
6
HOH
HOH
2083
A
HOH
2084
6
HOH
HOH
2084
A
HOH
2085
6
HOH
HOH
2085
A
HOH
2086
6
HOH
HOH
2086
A
HOH
2087
6
HOH
HOH
2087
A
HOH
2088
6
HOH
HOH
2088
A
HOH
2089
6
HOH
HOH
2089
A
HOH
2090
6
HOH
HOH
2090
A
HOH
2091
6
HOH
HOH
2091
A
HOH
2092
6
HOH
HOH
2092
A
HOH
2093
6
HOH
HOH
2093
A
HOH
2094
6
HOH
HOH
2094
A
HOH
2095
6
HOH
HOH
2095
A
HOH
2096
6
HOH
HOH
2096
A
HOH
2097
6
HOH
HOH
2097
A
HOH
2098
6
HOH
HOH
2098
A
HOH
2099
6
HOH
HOH
2099
A
HOH
2100
6
HOH
HOH
2100
A
HOH
2101
6
HOH
HOH
2101
A
HOH
2102
6
HOH
HOH
2102
A
HOH
2103
6
HOH
HOH
2103
A
HOH
2104
6
HOH
HOH
2104
A
HOH
2105
6
HOH
HOH
2105
A
HOH
2106
6
HOH
HOH
2106
A
HOH
2107
6
HOH
HOH
2107
A
HOH
2108
6
HOH
HOH
2108
A
HOH
2109
6
HOH
HOH
2109
A
HOH
2110
6
HOH
HOH
2110
A
HOH
2111
6
HOH
HOH
2111
A
HOH
2112
6
HOH
HOH
2112
A
HOH
2113
6
HOH
HOH
2113
A
HOH
2114
6
HOH
HOH
2114
A
HOH
2115
6
HOH
HOH
2115
A
HOH
2116
6
HOH
HOH
2116
A
HOH
2117
6
HOH
HOH
2117
A
HOH
2118
6
HOH
HOH
2118
A
HOH
2119
6
HOH
HOH
2119
A
HOH
2120
6
HOH
HOH
2120
A
HOH
2121
6
HOH
HOH
2121
A
HOH
2122
6
HOH
HOH
2122
A
HOH
2123
6
HOH
HOH
2123
A
HOH
2124
6
HOH
HOH
2124
A
HOH
2125
6
HOH
HOH
2125
A
HOH
2126
6
HOH
HOH
2126
A
HOH
2127
6
HOH
HOH
2127
A
HOH
2128
6
HOH
HOH
2128
A
HOH
2129
6
HOH
HOH
2129
A
HOH
2130
6
HOH
HOH
2130
A
HOH
2131
6
HOH
HOH
2131
A
HOH
2132
6
HOH
HOH
2132
A
HOH
2133
6
HOH
HOH
2133
A
HOH
2134
6
HOH
HOH
2134
A
HOH
2135
6
HOH
HOH
2135
A
HOH
2136
6
HOH
HOH
2136
A
HOH
2137
6
HOH
HOH
2137
A
HOH
2138
6
HOH
HOH
2138
A
HOH
2139
6
HOH
HOH
2139
A
HOH
2140
6
HOH
HOH
2140
A
HOH
2141
6
HOH
HOH
2141
A
HOH
2142
6
HOH
HOH
2142
A
HOH
2143
6
HOH
HOH
2143
A
HOH
2144
6
HOH
HOH
2144
A
HOH
2145
6
HOH
HOH
2145
A
HOH
2146
6
HOH
HOH
2146
A
HOH
2147
6
HOH
HOH
2147
A
HOH
2148
6
HOH
HOH
2148
A
HOH
2149
6
HOH
HOH
2149
A
HOH
2150
6
HOH
HOH
2150
A
HOH
2151
6
HOH
HOH
2151
A
HOH
2152
6
HOH
HOH
2152
A
HOH
2153
6
HOH
HOH
2153
A
HOH
2154
6
HOH
HOH
2154
A
HOH
2155
6
HOH
HOH
2155
A
HOH
2156
6
HOH
HOH
2156
A
HOH
2157
6
HOH
HOH
2157
A
HOH
2001
6
HOH
HOH
2001
B
HOH
2002
6
HOH
HOH
2002
B
HOH
2003
6
HOH
HOH
2003
B
HOH
2004
6
HOH
HOH
2004
B
HOH
2005
6
HOH
HOH
2005
B
HOH
2006
6
HOH
HOH
2006
B
HOH
2007
6
HOH
HOH
2007
B
HOH
2008
6
HOH
HOH
2008
B
HOH
2009
6
HOH
HOH
2009
B
HOH
2010
6
HOH
HOH
2010
B
HOH
2011
6
HOH
HOH
2011
B
HOH
2012
6
HOH
HOH
2012
B
HOH
2013
6
HOH
HOH
2013
B
HOH
2014
6
HOH
HOH
2014
B
HOH
2015
6
HOH
HOH
2015
B
HOH
2016
6
HOH
HOH
2016
B
HOH
2017
6
HOH
HOH
2017
B
HOH
2018
6
HOH
HOH
2018
B
HOH
2019
6
HOH
HOH
2019
B
HOH
2020
6
HOH
HOH
2020
B
HOH
2021
6
HOH
HOH
2021
B
HOH
2022
6
HOH
HOH
2022
B
HOH
2023
6
HOH
HOH
2023
B
HOH
2024
6
HOH
HOH
2024
B
HOH
2025
6
HOH
HOH
2025
B
HOH
2026
6
HOH
HOH
2026
B
HOH
2027
6
HOH
HOH
2027
B
HOH
2028
6
HOH
HOH
2028
B
HOH
2029
6
HOH
HOH
2029
B
HOH
2030
6
HOH
HOH
2030
B
HOH
2031
6
HOH
HOH
2031
B
HOH
2032
6
HOH
HOH
2032
B
HOH
2033
6
HOH
HOH
2033
B
HOH
2034
6
HOH
HOH
2034
B
HOH
2035
6
HOH
HOH
2035
B
HOH
2036
6
HOH
HOH
2036
B
HOH
2037
6
HOH
HOH
2037
B
HOH
2038
6
HOH
HOH
2038
B
HOH
2039
6
HOH
HOH
2039
B
HOH
2040
6
HOH
HOH
2040
B
HOH
2041
6
HOH
HOH
2041
B
HOH
2042
6
HOH
HOH
2042
B
HOH
2043
6
HOH
HOH
2043
B
HOH
2044
6
HOH
HOH
2044
B
HOH
2045
6
HOH
HOH
2045
B
HOH
2046
6
HOH
HOH
2046
B
HOH
2047
6
HOH
HOH
2047
B
HOH
2048
6
HOH
HOH
2048
B
HOH
2049
6
HOH
HOH
2049
B
HOH
2050
6
HOH
HOH
2050
B
HOH
2051
6
HOH
HOH
2051
B
HOH
2052
6
HOH
HOH
2052
B
HOH
2053
6
HOH
HOH
2053
B
HOH
2054
6
HOH
HOH
2054
B
HOH
2055
6
HOH
HOH
2055
B
HOH
2056
6
HOH
HOH
2056
B
HOH
2057
6
HOH
HOH
2057
B
HOH
2058
6
HOH
HOH
2058
B
HOH
2059
6
HOH
HOH
2059
B
HOH
2060
6
HOH
HOH
2060
B
HOH
2061
6
HOH
HOH
2061
B
HOH
2062
6
HOH
HOH
2062
B
HOH
2063
6
HOH
HOH
2063
B
HOH
2064
6
HOH
HOH
2064
B
HOH
2001
6
HOH
HOH
2001
C
HOH
2002
6
HOH
HOH
2002
C
HOH
2003
6
HOH
HOH
2003
C
HOH
2004
6
HOH
HOH
2004
C
HOH
2005
6
HOH
HOH
2005
C
HOH
2006
6
HOH
HOH
2006
C
HOH
2007
6
HOH
HOH
2007
C
HOH
2008
6
HOH
HOH
2008
C
HOH
2009
6
HOH
HOH
2009
C
HOH
2010
6
HOH
HOH
2010
C
HOH
2011
6
HOH
HOH
2011
C
HOH
2012
6
HOH
HOH
2012
C
HOH
2013
6
HOH
HOH
2013
C
HOH
2014
6
HOH
HOH
2014
C
HOH
2015
6
HOH
HOH
2015
C
HOH
2016
6
HOH
HOH
2016
C
HOH
2017
6
HOH
HOH
2017
C
HOH
2018
6
HOH
HOH
2018
C
HOH
2019
6
HOH
HOH
2019
C
HOH
2020
6
HOH
HOH
2020
C
HOH
2021
6
HOH
HOH
2021
C
HOH
2022
6
HOH
HOH
2022
C
HOH
2023
6
HOH
HOH
2023
C
HOH
2024
6
HOH
HOH
2024
C
HOH
2025
6
HOH
HOH
2025
C
HOH
2026
6
HOH
HOH
2026
C
HOH
2027
6
HOH
HOH
2027
C
HOH
2028
6
HOH
HOH
2028
C
HOH
2029
6
HOH
HOH
2029
C
HOH
2030
6
HOH
HOH
2030
C
HOH
2031
6
HOH
HOH
2031
C
HOH
2032
6
HOH
HOH
2032
C
HOH
2033
6
HOH
HOH
2033
C
HOH
2034
6
HOH
HOH
2034
C
HOH
2035
6
HOH
HOH
2035
C
HOH
2036
6
HOH
HOH
2036
C
HOH
2037
6
HOH
HOH
2037
C
HOH
2038
6
HOH
HOH
2038
C
HOH
2039
6
HOH
HOH
2039
C
HOH
2040
6
HOH
HOH
2040
C
HOH
2041
6
HOH
HOH
2041
C
HOH
2042
6
HOH
HOH
2042
C
HOH
2043
6
HOH
HOH
2043
C
HOH
2044
6
HOH
HOH
2044
C
HOH
2045
6
HOH
HOH
2045
C
HOH
2046
6
HOH
HOH
2046
C
HOH
2047
6
HOH
HOH
2047
C
HOH
2048
6
HOH
HOH
2048
C
HOH
2049
6
HOH
HOH
2049
C
HOH
2050
6
HOH
HOH
2050
C
HOH
2051
6
HOH
HOH
2051
C
HOH
2052
6
HOH
HOH
2052
C
HOH
2053
6
HOH
HOH
2053
C
HOH
2054
6
HOH
HOH
2054
C
HOH
2055
6
HOH
HOH
2055
C
HOH
2056
6
HOH
HOH
2056
C
HOH
2057
6
HOH
HOH
2057
C
HOH
2058
6
HOH
HOH
2058
C
HOH
2059
6
HOH
HOH
2059
C
HOH
2060
6
HOH
HOH
2060
C
HOH
2061
6
HOH
HOH
2061
C
HOH
2062
6
HOH
HOH
2062
C
HOH
2063
6
HOH
HOH
2063
C
HOH
2064
6
HOH
HOH
2064
C
HOH
2065
6
HOH
HOH
2065
C
HOH
2066
6
HOH
HOH
2066
C
HOH
2067
6
HOH
HOH
2067
C
HOH
2068
6
HOH
HOH
2068
C
HOH
2069
6
HOH
HOH
2069
C
HOH
2070
6
HOH
HOH
2070
C
HOH
2071
6
HOH
HOH
2071
C
HOH
2001
6
HOH
HOH
2001
D
HOH
2002
6
HOH
HOH
2002
D
HOH
2003
6
HOH
HOH
2003
D
HOH
2004
6
HOH
HOH
2004
D
HOH
2005
6
HOH
HOH
2005
D
HOH
2006
6
HOH
HOH
2006
D
HOH
2007
6
HOH
HOH
2007
D
HOH
2008
6
HOH
HOH
2008
D
HOH
2009
6
HOH
HOH
2009
D
HOH
2010
6
HOH
HOH
2010
D
HOH
2011
6
HOH
HOH
2011
D
HOH
2012
6
HOH
HOH
2012
D
HOH
2013
6
HOH
HOH
2013
D
HOH
2014
6
HOH
HOH
2014
D
HOH
2015
6
HOH
HOH
2015
D
HOH
2016
6
HOH
HOH
2016
D
HOH
2017
6
HOH
HOH
2017
D
HOH
2018
6
HOH
HOH
2018
D
HOH
2019
6
HOH
HOH
2019
D
HOH
2020
6
HOH
HOH
2020
D
HOH
2021
6
HOH
HOH
2021
D
HOH
2022
6
HOH
HOH
2022
D
HOH
2023
6
HOH
HOH
2023
D
HOH
2024
6
HOH
HOH
2024
D
HOH
2025
6
HOH
HOH
2025
D
HOH
2026
6
HOH
HOH
2026
D
HOH
2027
6
HOH
HOH
2027
D
HOH
2028
6
HOH
HOH
2028
D
HOH
2029
6
HOH
HOH
2029
D
HOH
2030
6
HOH
HOH
2030
D
HOH
2031
6
HOH
HOH
2031
D
HOH
2032
6
HOH
HOH
2032
D
HOH
2033
6
HOH
HOH
2033
D
HOH
2034
6
HOH
HOH
2034
D
HOH
2035
6
HOH
HOH
2035
D
HOH
2036
6
HOH
HOH
2036
D
HOH
2037
6
HOH
HOH
2037
D
HOH
2038
6
HOH
HOH
2038
D
HOH
2039
6
HOH
HOH
2039
D
HOH
2040
6
HOH
HOH
2040
D
HOH
2041
6
HOH
HOH
2041
D
HOH
2042
6
HOH
HOH
2042
D
HOH
2043
6
HOH
HOH
2043
D
HOH
2044
6
HOH
HOH
2044
D
HOH
2045
6
HOH
HOH
2045
D
HOH
2046
6
HOH
HOH
2046
D
HOH
2047
6
HOH
HOH
2047
D
HOH
2048
6
HOH
HOH
2048
D
HOH
2049
6
HOH
HOH
2049
D
HOH
2050
6
HOH
HOH
2050
D
HOH
2051
6
HOH
HOH
2051
D
HOH
2052
6
HOH
HOH
2052
D
HOH
2053
6
HOH
HOH
2053
D
HOH
2054
6
HOH
HOH
2054
D
HOH
2055
6
HOH
HOH
2055
D
HOH
2056
6
HOH
HOH
2056
D
HOH
2057
6
HOH
HOH
2057
D
HOH
2001
6
HOH
HOH
2001
P
HOH
2002
6
HOH
HOH
2002
P
HOH
2003
6
HOH
HOH
2003
P
n
1
1
A
SER
2
n
2
SER
2
A
HIS
3
n
3
HIS
3
A
SER
4
n
4
SER
4
A
LEU
5
n
5
LEU
5
A
ARG
6
n
6
ARG
6
A
TYR
7
n
7
TYR
7
A
PHE
8
n
8
PHE
8
A
VAL
9
n
9
VAL
9
A
THR
10
n
10
THR
10
A
ALA
11
n
11
ALA
11
A
VAL
12
n
12
VAL
12
A
SER
13
n
13
SER
13
A
ARG
14
n
14
ARG
14
A
PRO
15
n
15
PRO
15
A
GLY
16
n
16
GLY
16
A
PHE
17
n
17
PHE
17
A
GLY
18
n
18
GLY
18
A
GLU
19
n
19
GLU
19
A
PRO
20
n
20
PRO
20
A
ARG
21
n
21
ARG
21
A
TYR
22
n
22
TYR
22
A
MET
23
n
23
MET
23
A
GLU
24
n
24
GLU
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
TYR
27
n
27
TYR
27
A
VAL
28
n
28
VAL
28
A
ASP
29
n
29
ASP
29
A
ASN
30
n
30
ASN
30
A
THR
31
n
31
THR
31
A
GLU
32
n
32
GLU
32
A
PHE
33
n
33
PHE
33
A
VAL
34
n
34
VAL
34
A
ARG
35
n
35
ARG
35
A
PHE
36
n
36
PHE
36
A
ASP
37
n
37
ASP
37
A
SER
38
n
38
SER
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
GLU
41
n
41
GLU
41
A
ASN
42
n
42
ASN
42
A
PRO
43
n
43
PRO
43
A
ARG
44
n
44
ARG
44
A
TYR
45
n
45
TYR
45
A
GLU
46
n
46
GLU
46
A
PRO
47
n
47
PRO
47
A
ARG
48
n
48
ARG
48
A
ALA
49
n
49
ALA
49
A
ARG
50
n
50
ARG
50
A
TRP
51
n
51
TRP
51
A
ILE
52
n
52
ILE
52
A
GLU
53
n
53
GLU
53
A
GLN
54
n
54
GLN
54
A
GLU
55
n
55
GLU
55
A
GLY
56
n
56
GLY
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
TYR
59
n
59
TYR
59
A
TRP
60
n
60
TRP
60
A
GLU
61
n
61
GLU
61
A
ARG
62
n
62
ARG
62
A
GLU
63
n
63
GLU
63
A
THR
64
n
64
THR
64
A
ARG
65
n
65
ARG
65
A
ARG
66
n
66
ARG
66
A
ALA
67
n
67
ALA
67
A
LYS
68
n
68
LYS
68
A
GLY
69
n
69
GLY
69
A
ASN
70
n
70
ASN
70
A
GLU
71
n
71
GLU
71
A
GLN
72
n
72
GLN
72
A
SER
73
n
73
SER
73
A
PHE
74
n
74
PHE
74
A
ARG
75
n
75
ARG
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
LEU
78
n
78
LEU
78
A
ARG
79
n
79
ARG
79
A
THR
80
n
80
THR
80
A
ALA
81
n
81
ALA
81
A
LEU
82
n
82
LEU
82
A
ARG
83
n
83
ARG
83
A
TYR
84
n
84
TYR
84
A
TYR
85
n
85
TYR
85
A
ASN
86
n
86
ASN
86
A
GLN
87
n
87
GLN
87
A
SER
88
n
88
SER
88
A
ALA
89
n
89
ALA
89
A
GLY
90
n
90
GLY
90
A
GLY
91
n
91
GLY
91
A
SER
92
n
92
SER
92
A
HIS
93
n
93
HIS
93
A
THR
94
n
94
THR
94
A
LEU
95
n
95
LEU
95
A
GLN
96
n
96
GLN
96
A
TRP
97
n
97
TRP
97
A
MET
98
n
98
MET
98
A
ALA
99
n
99
ALA
99
A
GLY
100
n
100
GLY
100
A
CYS
101
n
101
CYS
101
A
ASP
102
n
102
ASP
102
A
VAL
103
n
103
VAL
103
A
GLU
104
n
104
GLU
104
A
SER
105
n
105
SER
105
A
ASP
106
n
106
ASP
106
A
GLY
107
n
107
GLY
107
A
ARG
108
n
108
ARG
108
A
LEU
109
n
109
LEU
109
A
LEU
110
n
110
LEU
110
A
ARG
111
n
111
ARG
111
A
GLY
112
n
112
GLY
112
A
TYR
113
n
113
TYR
113
A
TRP
114
n
114
TRP
114
A
GLN
115
n
115
GLN
115
A
PHE
116
n
116
PHE
116
A
ALA
117
n
117
ALA
117
A
TYR
118
n
118
TYR
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
CYS
121
n
121
CYS
121
A
ASP
122
n
122
ASP
122
A
TYR
123
n
123
TYR
123
A
ILE
124
n
124
ILE
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
ASN
127
n
127
ASN
127
A
GLU
128
n
128
GLU
128
A
ASP
129
n
129
ASP
129
A
LEU
130
n
130
LEU
130
A
LYS
131
n
131
LYS
131
A
THR
132
n
132
THR
132
A
TRP
133
n
133
TRP
133
A
THR
134
n
134
THR
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
MET
138
n
138
MET
138
A
ALA
139
n
139
ALA
139
A
ALA
140
n
140
ALA
140
A
GLN
141
n
141
GLN
141
A
ILE
142
n
142
ILE
142
A
THR
143
n
143
THR
143
A
ARG
144
n
144
ARG
144
A
ARG
145
n
145
ARG
145
A
LYS
146
n
146
LYS
146
A
TRP
147
n
147
TRP
147
A
GLU
148
n
148
GLU
148
A
GLN
149
n
149
GLN
149
A
ALA
150
n
150
ALA
150
A
GLY
151
n
151
GLY
151
A
ALA
152
n
152
ALA
152
A
ALA
153
n
153
ALA
153
A
GLU
154
n
154
GLU
154
A
ARG
155
n
155
ARG
155
A
ASP
156
n
156
ASP
156
A
ARG
157
n
157
ARG
157
A
ALA
158
n
158
ALA
158
A
TYR
159
n
159
TYR
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
GLU
163
n
163
GLU
163
A
CYS
164
n
164
CYS
164
A
VAL
165
n
165
VAL
165
A
GLU
166
n
166
GLU
166
A
TRP
167
n
167
TRP
167
A
LEU
168
n
168
LEU
168
A
ARG
169
n
169
ARG
169
A
ARG
170
n
170
ARG
170
A
TYR
171
n
171
TYR
171
A
LEU
172
n
172
LEU
172
A
LYS
173
n
173
LYS
173
A
ASN
174
n
174
ASN
174
A
GLY
175
n
175
GLY
175
A
ASN
176
n
176
ASN
176
A
ALA
177
n
177
ALA
177
A
THR
178
n
178
THR
178
A
LEU
179
n
179
LEU
179
A
LEU
180
n
180
LEU
180
A
ARG
181
n
181
ARG
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
PRO
184
n
184
PRO
184
A
PRO
185
n
185
PRO
185
A
LYS
186
n
186
LYS
186
A
ALA
187
n
187
ALA
187
A
HIS
188
n
188
HIS
188
A
VAL
189
n
189
VAL
189
A
THR
190
n
190
THR
190
A
HIS
191
n
191
HIS
191
A
HIS
192
n
192
HIS
192
A
ARG
193
n
193
ARG
193
A
ARG
194
n
194
ARG
194
A
PRO
195
n
195
PRO
195
A
GLU
196
n
196
GLU
196
A
GLY
197
n
197
GLY
197
A
ASP
198
n
198
ASP
198
A
VAL
199
n
199
VAL
199
A
THR
200
n
200
THR
200
A
LEU
201
n
201
LEU
201
A
ARG
202
n
202
ARG
202
A
CYS
203
n
203
CYS
203
A
TRP
204
n
204
TRP
204
A
ALA
205
n
205
ALA
205
A
LEU
206
n
206
LEU
206
A
GLY
207
n
207
GLY
207
A
PHE
208
n
208
PHE
208
A
TYR
209
n
209
TYR
209
A
PRO
210
n
210
PRO
210
A
ALA
211
n
211
ALA
211
A
ASP
212
n
212
ASP
212
A
ILE
213
n
213
ILE
213
A
THR
214
n
214
THR
214
A
LEU
215
n
215
LEU
215
A
THR
216
n
216
THR
216
A
TRP
217
n
217
TRP
217
A
GLN
218
n
218
GLN
218
A
LEU
219
n
219
LEU
219
A
ASN
220
n
220
ASN
220
A
GLY
221
n
221
GLY
221
A
GLU
222
n
222
GLU
222
A
GLU
223
n
223
GLU
223
A
LEU
224
n
224
LEU
224
A
THR
225
n
225
THR
225
A
GLN
226
n
226
GLN
226
A
GLU
227
n
227
GLU
227
A
MET
228
n
228
MET
228
A
GLU
229
n
229
GLU
229
A
LEU
230
n
230
LEU
230
A
VAL
231
n
231
VAL
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
ARG
234
n
234
ARG
234
A
PRO
235
n
235
PRO
235
A
ALA
236
n
236
ALA
236
A
GLY
237
n
237
GLY
237
A
ASP
238
n
238
ASP
238
A
GLY
239
n
239
GLY
239
A
THR
240
n
240
THR
240
A
PHE
241
n
241
PHE
241
A
GLN
242
n
242
GLN
242
A
LYS
243
n
243
LYS
243
A
TRP
244
n
244
TRP
244
A
ALA
245
n
245
ALA
245
A
SER
246
n
246
SER
246
A
VAL
247
n
247
VAL
247
A
VAL
248
n
248
VAL
248
A
VAL
249
n
249
VAL
249
A
PRO
250
n
250
PRO
250
A
LEU
251
n
251
LEU
251
A
GLY
252
n
252
GLY
252
A
LYS
253
n
253
LYS
253
A
GLU
254
n
254
GLU
254
A
GLN
255
n
255
GLN
255
A
LYS
256
n
256
LYS
256
A
TYR
257
n
257
TYR
257
A
THR
258
n
258
THR
258
A
CYS
259
n
259
CYS
259
A
HIS
260
n
260
HIS
260
A
VAL
261
n
261
VAL
261
A
GLU
262
n
262
GLU
262
A
HIS
263
n
263
HIS
263
A
GLU
264
n
264
GLU
264
A
GLY
265
n
265
GLY
265
A
LEU
266
n
266
LEU
266
A
PRO
267
n
267
PRO
267
A
GLU
268
n
268
GLU
268
A
PRO
269
n
269
PRO
269
A
LEU
270
n
270
LEU
270
A
THR
271
n
271
THR
271
A
LEU
272
n
272
LEU
272
A
ARG
273
n
273
ARG
273
A
TRP
274
n
274
TRP
274
A
GLY
275
n
275
GLY
275
A
n
276
276
A
n
277
277
A
MET
0
n
1
MET
0
B
ILE
1
n
2
ILE
1
B
GLN
2
n
3
GLN
2
B
LYS
3
n
4
LYS
3
B
THR
4
n
5
THR
4
B
PRO
5
n
6
PRO
5
B
GLN
6
n
7
GLN
6
B
ILE
7
n
8
ILE
7
B
GLN
8
n
9
GLN
8
B
VAL
9
n
10
VAL
9
B
TYR
10
n
11
TYR
10
B
SER
11
n
12
SER
11
B
ARG
12
n
13
ARG
12
B
HIS
13
n
14
HIS
13
B
PRO
14
n
15
PRO
14
B
PRO
15
n
16
PRO
15
B
GLU
16
n
17
GLU
16
B
ASN
17
n
18
ASN
17
B
GLY
18
n
19
GLY
18
B
LYS
19
n
20
LYS
19
B
PRO
20
n
21
PRO
20
B
ASN
21
n
22
ASN
21
B
ILE
22
n
23
ILE
22
B
LEU
23
n
24
LEU
23
B
ASN
24
n
25
ASN
24
B
CYS
25
n
26
CYS
25
B
TYR
26
n
27
TYR
26
B
VAL
27
n
28
VAL
27
B
THR
28
n
29
THR
28
B
GLN
29
n
30
GLN
29
B
PHE
30
n
31
PHE
30
B
HIS
31
n
32
HIS
31
B
PRO
32
n
33
PRO
32
B
PRO
33
n
34
PRO
33
B
HIS
34
n
35
HIS
34
B
ILE
35
n
36
ILE
35
B
GLU
36
n
37
GLU
36
B
ILE
37
n
38
ILE
37
B
GLN
38
n
39
GLN
38
B
MET
39
n
40
MET
39
B
LEU
40
n
41
LEU
40
B
LYS
41
n
42
LYS
41
B
ASN
42
n
43
ASN
42
B
GLY
43
n
44
GLY
43
B
LYS
44
n
45
LYS
44
B
LYS
45
n
46
LYS
45
B
ILE
46
n
47
ILE
46
B
PRO
47
n
48
PRO
47
B
LYS
48
n
49
LYS
48
B
VAL
49
n
50
VAL
49
B
GLU
50
n
51
GLU
50
B
MET
51
n
52
MET
51
B
SER
52
n
53
SER
52
B
ASP
53
n
54
ASP
53
B
MET
54
n
55
MET
54
B
SER
55
n
56
SER
55
B
PHE
56
n
57
PHE
56
B
SER
57
n
58
SER
57
B
LYS
58
n
59
LYS
58
B
ASP
59
n
60
ASP
59
B
TRP
60
n
61
TRP
60
B
SER
61
n
62
SER
61
B
PHE
62
n
63
PHE
62
B
TYR
63
n
64
TYR
63
B
ILE
64
n
65
ILE
64
B
LEU
65
n
66
LEU
65
B
ALA
66
n
67
ALA
66
B
HIS
67
n
68
HIS
67
B
THR
68
n
69
THR
68
B
GLU
69
n
70
GLU
69
B
PHE
70
n
71
PHE
70
B
THR
71
n
72
THR
71
B
PRO
72
n
73
PRO
72
B
THR
73
n
74
THR
73
B
GLU
74
n
75
GLU
74
B
THR
75
n
76
THR
75
B
ASP
76
n
77
ASP
76
B
THR
77
n
78
THR
77
B
TYR
78
n
79
TYR
78
B
ALA
79
n
80
ALA
79
B
CYS
80
n
81
CYS
80
B
ARG
81
n
82
ARG
81
B
VAL
82
n
83
VAL
82
B
LYS
83
n
84
LYS
83
B
HIS
84
n
85
HIS
84
B
ALA
85
n
86
ALA
85
B
SER
86
n
87
SER
86
B
MET
87
n
88
MET
87
B
ALA
88
n
89
ALA
88
B
GLU
89
n
90
GLU
89
B
PRO
90
n
91
PRO
90
B
LYS
91
n
92
LYS
91
B
THR
92
n
93
THR
92
B
VAL
93
n
94
VAL
93
B
TYR
94
n
95
TYR
94
B
TRP
95
n
96
TRP
95
B
ASP
96
n
97
ASP
96
B
ARG
97
n
98
ARG
97
B
ASP
98
n
99
ASP
98
B
MET
99
n
100
MET
99
B
SER
126
n
1
SER
126
C
THR
127
n
2
THR
127
C
VAL
128
n
3
VAL
128
C
LEU
129
n
4
LEU
129
C
ASP
130
n
5
ASP
130
C
SER
131
n
6
SER
131
C
LEU
132
n
7
LEU
132
C
GLN
133
n
8
GLN
133
C
HIS
134
n
9
HIS
134
C
n
10
135
C
n
11
136
C
n
12
137
C
n
13
138
C
n
14
139
C
LYS
140
n
15
LYS
140
C
VAL
141
n
16
VAL
141
C
TYR
142
n
17
TYR
142
C
TRP
143
n
18
TRP
143
C
PHE
144
n
19
PHE
144
C
CYS
145
n
20
CYS
145
C
TYR
146
n
21
TYR
146
C
GLY
147
n
22
GLY
147
C
MET
148
n
23
MET
148
C
LYS
149
n
24
LYS
149
C
CYS
150
n
25
CYS
150
C
TYR
151
n
26
TYR
151
C
TYR
152
n
27
TYR
152
C
PHE
153
n
28
PHE
153
C
VAL
154
n
29
VAL
154
C
MET
155
n
30
MET
155
C
ASP
156
n
31
ASP
156
C
ARG
157
n
32
ARG
157
C
LYS
158
n
33
LYS
158
C
THR
159
n
34
THR
159
C
TRP
160
n
35
TRP
160
C
SER
161
n
36
SER
161
C
GLY
162
n
37
GLY
162
C
CYS
163
n
38
CYS
163
C
LYS
164
n
39
LYS
164
C
GLN
165
n
40
GLN
165
C
THR
166
n
41
THR
166
C
CYS
167
n
42
CYS
167
C
GLN
168
n
43
GLN
168
C
SER
169
n
44
SER
169
C
SER
170
n
45
SER
170
C
SER
171
n
46
SER
171
C
LEU
172
n
47
LEU
172
C
SER
173
n
48
SER
173
C
LEU
174
n
49
LEU
174
C
LEU
175
n
50
LEU
175
C
LYS
176
n
51
LYS
176
C
ILE
177
n
52
ILE
177
C
ASP
178
n
53
ASP
178
C
ASP
179
n
54
ASP
179
C
GLU
180
n
55
GLU
180
C
ASP
181
n
56
ASP
181
C
GLU
182
n
57
GLU
182
C
LEU
183
n
58
LEU
183
C
LYS
184
n
59
LYS
184
C
PHE
185
n
60
PHE
185
C
LEU
186
n
61
LEU
186
C
GLN
187
n
62
GLN
187
C
LEU
188
n
63
LEU
188
C
VAL
189
n
64
VAL
189
C
VAL
190
n
65
VAL
190
C
PRO
191
n
66
PRO
191
C
SER
192
n
67
SER
192
C
ASP
193
n
68
ASP
193
C
SER
194
n
69
SER
194
C
CYS
195
n
70
CYS
195
C
TRP
196
n
71
TRP
196
C
VAL
197
n
72
VAL
197
C
GLY
198
n
73
GLY
198
C
LEU
199
n
74
LEU
199
C
SER
200
n
75
SER
200
C
TYR
201
n
76
TYR
201
C
ASP
202
n
77
ASP
202
C
ASN
203
n
78
ASN
203
C
LYS
204
n
79
LYS
204
C
LYS
205
n
80
LYS
205
C
LYS
206
n
81
LYS
206
C
ASP
207
n
82
ASP
207
C
TRP
208
n
83
TRP
208
C
ALA
209
n
84
ALA
209
C
TRP
210
n
85
TRP
210
C
ILE
211
n
86
ILE
211
C
ASP
212
n
87
ASP
212
C
ASN
213
n
88
ASN
213
C
ARG
214
n
89
ARG
214
C
PRO
215
n
90
PRO
215
C
SER
216
n
91
SER
216
C
LYS
217
n
92
LYS
217
C
LEU
218
n
93
LEU
218
C
ALA
219
n
94
ALA
219
C
LEU
220
n
95
LEU
220
C
ASN
221
n
96
ASN
221
C
THR
222
n
97
THR
222
C
ARG
223
n
98
ARG
223
C
LYS
224
n
99
LYS
224
C
TYR
225
n
100
TYR
225
C
ASN
226
n
101
ASN
226
C
ILE
227
n
102
ILE
227
C
ARG
228
n
103
ARG
228
C
ASP
229
n
104
ASP
229
C
GLY
230
n
105
GLY
230
C
GLY
231
n
106
GLY
231
C
CYS
232
n
107
CYS
232
C
MET
233
n
108
MET
233
C
LEU
234
n
109
LEU
234
C
LEU
235
n
110
LEU
235
C
SER
236
n
111
SER
236
C
LYS
237
n
112
LYS
237
C
THR
238
n
113
THR
238
C
ARG
239
n
114
ARG
239
C
LEU
240
n
115
LEU
240
C
ASP
241
n
116
ASP
241
C
ASN
242
n
117
ASN
242
C
GLY
243
n
118
GLY
243
C
ASN
244
n
119
ASN
244
C
CYS
245
n
120
CYS
245
C
ASP
246
n
121
ASP
246
C
GLN
247
n
122
GLN
247
C
VAL
248
n
123
VAL
248
C
PHE
249
n
124
PHE
249
C
ILE
250
n
125
ILE
250
C
CYS
251
n
126
CYS
251
C
ILE
252
n
127
ILE
252
C
CYS
253
n
128
CYS
253
C
GLY
254
n
129
GLY
254
C
LYS
255
n
130
LYS
255
C
ARG
256
n
131
ARG
256
C
LEU
257
n
132
LEU
257
C
ASP
258
n
133
ASP
258
C
n
134
259
C
n
135
260
C
n
136
261
C
n
137
262
C
n
1
126
D
n
2
127
D
n
3
128
D
n
4
129
D
n
5
130
D
n
6
131
D
n
7
132
D
n
8
133
D
n
9
134
D
n
10
135
D
n
11
136
D
n
12
137
D
n
13
138
D
ASP
139
n
14
ASP
139
D
LYS
140
n
15
LYS
140
D
VAL
141
n
16
VAL
141
D
TYR
142
n
17
TYR
142
D
TRP
143
n
18
TRP
143
D
PHE
144
n
19
PHE
144
D
CYS
145
n
20
CYS
145
D
TYR
146
n
21
TYR
146
D
GLY
147
n
22
GLY
147
D
MET
148
n
23
MET
148
D
LYS
149
n
24
LYS
149
D
CYS
150
n
25
CYS
150
D
TYR
151
n
26
TYR
151
D
TYR
152
n
27
TYR
152
D
PHE
153
n
28
PHE
153
D
VAL
154
n
29
VAL
154
D
MET
155
n
30
MET
155
D
ASP
156
n
31
ASP
156
D
ARG
157
n
32
ARG
157
D
LYS
158
n
33
LYS
158
D
THR
159
n
34
THR
159
D
TRP
160
n
35
TRP
160
D
SER
161
n
36
SER
161
D
GLY
162
n
37
GLY
162
D
CYS
163
n
38
CYS
163
D
LYS
164
n
39
LYS
164
D
GLN
165
n
40
GLN
165
D
THR
166
n
41
THR
166
D
CYS
167
n
42
CYS
167
D
GLN
168
n
43
GLN
168
D
SER
169
n
44
SER
169
D
SER
170
n
45
SER
170
D
SER
171
n
46
SER
171
D
LEU
172
n
47
LEU
172
D
SER
173
n
48
SER
173
D
LEU
174
n
49
LEU
174
D
LEU
175
n
50
LEU
175
D
LYS
176
n
51
LYS
176
D
ILE
177
n
52
ILE
177
D
ASP
178
n
53
ASP
178
D
ASP
179
n
54
ASP
179
D
GLU
180
n
55
GLU
180
D
ASP
181
n
56
ASP
181
D
GLU
182
n
57
GLU
182
D
LEU
183
n
58
LEU
183
D
LYS
184
n
59
LYS
184
D
PHE
185
n
60
PHE
185
D
LEU
186
n
61
LEU
186
D
GLN
187
n
62
GLN
187
D
LEU
188
n
63
LEU
188
D
VAL
189
n
64
VAL
189
D
VAL
190
n
65
VAL
190
D
PRO
191
n
66
PRO
191
D
SER
192
n
67
SER
192
D
ASP
193
n
68
ASP
193
D
SER
194
n
69
SER
194
D
CYS
195
n
70
CYS
195
D
TRP
196
n
71
TRP
196
D
VAL
197
n
72
VAL
197
D
GLY
198
n
73
GLY
198
D
LEU
199
n
74
LEU
199
D
SER
200
n
75
SER
200
D
TYR
201
n
76
TYR
201
D
ASP
202
n
77
ASP
202
D
ASN
203
n
78
ASN
203
D
LYS
204
n
79
LYS
204
D
LYS
205
n
80
LYS
205
D
LYS
206
n
81
LYS
206
D
ASP
207
n
82
ASP
207
D
TRP
208
n
83
TRP
208
D
ALA
209
n
84
ALA
209
D
TRP
210
n
85
TRP
210
D
ILE
211
n
86
ILE
211
D
ASP
212
n
87
ASP
212
D
ASN
213
n
88
ASN
213
D
ARG
214
n
89
ARG
214
D
PRO
215
n
90
PRO
215
D
SER
216
n
91
SER
216
D
LYS
217
n
92
LYS
217
D
LEU
218
n
93
LEU
218
D
ALA
219
n
94
ALA
219
D
LEU
220
n
95
LEU
220
D
ASN
221
n
96
ASN
221
D
THR
222
n
97
THR
222
D
ARG
223
n
98
ARG
223
D
LYS
224
n
99
LYS
224
D
TYR
225
n
100
TYR
225
D
ASN
226
n
101
ASN
226
D
ILE
227
n
102
ILE
227
D
ARG
228
n
103
ARG
228
D
ASP
229
n
104
ASP
229
D
GLY
230
n
105
GLY
230
D
GLY
231
n
106
GLY
231
D
CYS
232
n
107
CYS
232
D
MET
233
n
108
MET
233
D
LEU
234
n
109
LEU
234
D
LEU
235
n
110
LEU
235
D
SER
236
n
111
SER
236
D
LYS
237
n
112
LYS
237
D
THR
238
n
113
THR
238
D
ARG
239
n
114
ARG
239
D
LEU
240
n
115
LEU
240
D
ASP
241
n
116
ASP
241
D
ASN
242
n
117
ASN
242
D
GLY
243
n
118
GLY
243
D
ASN
244
n
119
ASN
244
D
CYS
245
n
120
CYS
245
D
ASP
246
n
121
ASP
246
D
GLN
247
n
122
GLN
247
D
VAL
248
n
123
VAL
248
D
PHE
249
n
124
PHE
249
D
ILE
250
n
125
ILE
250
D
CYS
251
n
126
CYS
251
D
ILE
252
n
127
ILE
252
D
CYS
253
n
128
CYS
253
D
GLY
254
n
129
GLY
254
D
LYS
255
n
130
LYS
255
D
ARG
256
n
131
ARG
256
D
LEU
257
n
132
LEU
257
D
ASP
258
n
133
ASP
258
D
LYS
259
n
134
LYS
259
D
n
135
260
D
n
136
261
D
n
137
262
D
ARG
1
n
1
ARG
1
P
GLY
2
n
2
GLY
2
P
PRO
3
n
3
PRO
3
P
GLY
4
n
4
GLY
4
P
ARG
5
n
5
ARG
5
P
ALA
6
n
6
ALA
6
P
PHE
7
n
7
PHE
7
P
VAL
8
n
8
VAL
8
P
THR
9
n
9
THR
9
P
ILE
10
n
10
ILE
10
P
software_defined_assembly
PISA
5
pentameric
software_defined_assembly
PISA
5
pentameric
9700
-13.7
30200
9700
-13.7
30200
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y+1/2,-z+1/2
crystal symmetry operation
0.0000000000
48.4785000000
49.6590000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_545
-x,y-1/2,-z+1/2
crystal symmetry operation
0.0000000000
-48.4785000000
49.6590000000
A
O
THR
31
A
O
THR
31
A
N
VAL
28
A
N
VAL
28
A
O
ARG
21
A
O
ARG
21
A
N
VAL
12
A
N
VAL
12
A
O
HIS
3
A
O
HIS
3
A
N
VAL
103
A
N
VAL
103
A
O
GLN
96
A
O
GLN
96
A
N
ALA
117
A
N
ALA
117
A
O
PHE
116
A
O
PHE
116
A
N
ILE
124
A
N
ILE
124
A
O
ALA
125
A
O
ALA
125
A
N
THR
134
A
N
THR
134
A
O
LYS
186
A
O
LYS
186
A
N
LEU
206
A
N
LEU
206
A
O
VAL
199
A
O
VAL
199
A
N
VAL
249
A
N
VAL
249
A
O
THR
214
A
O
THR
214
A
N
GLU
262
A
N
GLU
262
A
O
CYS
259
A
O
CYS
259
A
N
LEU
272
A
N
LEU
272
B
O
GLN
6
B
O
GLN
7
B
N
THR
28
B
N
THR
29
B
O
ASN
21
B
O
ASN
22
B
N
PHE
70
B
N
PHE
71
B
O
GLU
36
B
O
GLU
37
B
N
LYS
83
B
N
LYS
84
B
O
CYS
80
B
O
CYS
81
B
N
VAL
93
B
N
VAL
94
C
O
TYR
142
C
O
TYR
17
C
N
PHE
153
C
N
PHE
28
C
O
CYS
150
C
O
CYS
25
C
N
LYS
255
C
N
LYS
130
C
O
SER
200
C
O
SER
75
C
N
ALA
209
C
N
ALA
84
C
O
CYS
232
C
O
CYS
107
C
N
GLY
243
C
N
GLY
118
D
O
TYR
142
D
O
TYR
17
D
N
PHE
153
D
N
PHE
28
D
O
CYS
150
D
O
CYS
25
D
N
LYS
255
D
N
LYS
130
D
O
SER
200
D
O
SER
75
D
N
ALA
209
D
N
ALA
84
D
O
CYS
232
D
O
CYS
107
D
N
GLY
243
D
N
GLY
118
1
A
MET
1
A
MET
1
1
Y
1
A
LYS
276
A
LYS
276
1
Y
1
A
GLU
277
A
GLU
277
1
Y
1
C
THR
135
C
THR
10
1
Y
1
C
GLY
136
C
GLY
11
1
Y
1
C
ARG
137
C
ARG
12
1
Y
1
C
GLY
138
C
GLY
13
1
Y
1
C
ASP
139
C
ASP
14
1
Y
1
C
LYS
259
C
LYS
134
1
Y
1
C
PHE
260
C
PHE
135
1
Y
1
C
PRO
261
C
PRO
136
1
Y
1
C
HIS
262
C
HIS
137
1
Y
1
D
SER
126
D
SER
1
1
Y
1
D
THR
127
D
THR
2
1
Y
1
D
VAL
128
D
VAL
3
1
Y
1
D
LEU
129
D
LEU
4
1
Y
1
D
ASP
130
D
ASP
5
1
Y
1
D
SER
131
D
SER
6
1
Y
1
D
LEU
132
D
LEU
7
1
Y
1
D
GLN
133
D
GLN
8
1
Y
1
D
HIS
134
D
HIS
9
1
Y
1
D
THR
135
D
THR
10
1
Y
1
D
GLY
136
D
GLY
11
1
Y
1
D
ARG
137
D
ARG
12
1
Y
1
D
GLY
138
D
GLY
13
1
Y
1
D
PHE
260
D
PHE
135
1
Y
1
D
PRO
261
D
PRO
136
1
Y
1
D
HIS
262
D
HIS
137
1
Y
1
A
ARG
14
-158.18
63.65
1
A
TRP
114
-163.43
82.69
1
A
ASP
198
-94.21
-159.98
1
A
GLU
223
-53.58
64.54
1
A
LEU
224
-76.67
45.44
1
A
GLN
226
-54.36
79.25
1
A
GLU
227
41.02
100.10
1
A
GLN
255
-62.41
0.60
1
B
GLU
16
-164.59
117.21
1
B
ASN
17
-38.85
138.98
1
B
TRP
60
88.26
-15.09
1
C
MET
148
-90.09
33.02
1
C
LEU
172
-111.81
-169.65
1
C
LEU
175
-36.44
129.08
1
C
LYS
204
-94.48
52.59
1
C
LYS
205
-168.37
-7.50
1
C
LYS
206
39.05
60.17
1
C
THR
222
-81.09
48.89
1
C
ARG
223
-146.43
-6.29
1
D
MET
155
-76.01
42.32
1
D
LEU
175
-33.14
131.84
PROTEIN_REP.PARAM
PROTEIN.TOP
ETH.PAR
WATER.TOP
WATER_REP.PARAM
ETH.TOP
25.8
-0.37
0.00
0.00
-3.36
0.00
3.72
0.238
0.005
0.198
0.198
2.30
20.00
1971
32986
6.0
95.5
RANDOM
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRIES 1B6E, 1DDH
MLF
FLAT MODEL
28
0.340658
0.31
0.25
5.00
0.25
0.15
2.30
20.00
352
5542
12
0
5178
0.006
1.4
24.4
0.74
1.48
1.50
2.45
2.00
2.13
2.00
3.17
2.50
0.279
0.018
0.204
2.40
233
3755
8
5.8
93.9
19.0
2.300
25.000
1QO3
33230
0.05300
1
15.1400
3.900
94.7
2.30
2.35
7.000
0.16100
1
80.7
refinement
CNS
0.9
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
0.9
Complex between NK cell receptor Ly49A and its MHC class I ligand H-2Dd
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
BIOLOGICAL_UNIT: PROTEIN-PROTEIN COMPLEX BETWEEN
THE NK-CELL SURFACE GLYCOPROTEIN DIMERIC AND THE
HETEROTRIMER CONSISTING OF THE H-2DD HEAVY CHAIN,
THE BETA-2-MICROGLOBULIN AND THE HIV ENVELOPE
PEPTIDE. THERE IS A SECOND COMPLEX FORMED THROUGH
SITE 2, AS DESCRIBED IN THE MAIN REFERENCE, AND
CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
GIVEN BELOW.
A
ALA
49
A
ALA
49
HELX_P
A
GLU
53
A
GLU
53
5
1
5
A
GLY
56
A
GLY
56
HELX_P
A
TYR
85
A
TYR
85
1
2
30
A
ASP
137
A
ASP
137
HELX_P
A
GLY
151
A
GLY
151
1
3
15
A
GLY
151
A
GLY
151
HELX_P
A
GLY
162
A
GLY
162
1
4
12
A
GLY
162
A
GLY
162
HELX_P
A
GLY
175
A
GLY
175
1
5
14
A
GLY
175
A
GLY
175
HELX_P
A
LEU
180
A
LEU
180
1
6
6
A
LYS
253
A
LYS
253
HELX_P
A
GLN
255
A
GLN
255
5
7
3
C
THR
159
C
THR
34
HELX_P
C
SER
170
C
SER
45
1
8
12
C
ASP
179
C
ASP
54
HELX_P
C
VAL
190
C
VAL
65
1
9
12
C
ASN
203
C
ASN
78
HELX_P
C
LYS
206
C
LYS
81
5
10
4
C
ASN
226
C
ASN
101
HELX_P
C
GLY
230
C
GLY
105
5
11
5
D
THR
159
D
THR
34
HELX_P
D
SER
170
D
SER
45
1
12
12
D
ASP
179
D
ASP
54
HELX_P
D
VAL
190
D
VAL
65
1
13
12
D
ASN
221
D
ASN
96
HELX_P
D
TYR
225
D
TYR
100
5
14
5
D
ASN
226
D
ASN
101
HELX_P
D
GLY
230
D
GLY
105
5
15
5
disulf
2.042
A
CYS
101
A
SG
CYS
101
1_555
A
CYS
164
A
SG
CYS
164
1_555
disulf
2.028
A
CYS
203
A
SG
CYS
203
1_555
A
CYS
259
A
SG
CYS
259
1_555
disulf
2.032
B
CYS
25
B
SG
CYS
26
1_555
B
CYS
80
B
SG
CYS
81
1_555
disulf
2.038
C
CYS
145
C
SG
CYS
20
1_555
C
CYS
150
C
SG
CYS
25
1_555
disulf
2.032
C
CYS
163
C
SG
CYS
38
1_555
C
CYS
251
C
SG
CYS
126
1_555
disulf
2.038
C
CYS
167
C
SG
CYS
42
1_555
C
CYS
253
C
SG
CYS
128
1_555
disulf
2.042
C
CYS
232
C
SG
CYS
107
1_555
C
CYS
245
C
SG
CYS
120
1_555
disulf
2.039
D
CYS
145
D
SG
CYS
20
1_555
D
CYS
150
D
SG
CYS
25
1_555
disulf
2.032
D
CYS
163
D
SG
CYS
38
1_555
D
CYS
251
D
SG
CYS
126
1_555
disulf
2.039
D
CYS
167
D
SG
CYS
42
1_555
D
CYS
253
D
SG
CYS
128
1_555
disulf
2.041
D
CYS
232
D
SG
CYS
107
1_555
D
CYS
245
D
SG
CYS
120
1_555
RECEPTOR/IMMUNE SYSTEM
RECEPTOR/IMMUNE SYSTEM, COMPLEX (NK RECEPTOR-MHC CLASS I), NK CELL, INHIBITORY RECEPTOR, MHC-I, C-TYPE LECTIN-LIKE, HISTOCOMPATIBILITY, B2M, LY49, LY-49, RECEPTOR-IMMUNE SYSTEM complex
A
TYR
209
A
TYR
209
1
A
PRO
210
A
PRO
210
0.82
B
HIS
31
B
HIS
32
1
B
PRO
32
B
PRO
33
0.12
1QO3
PDB
1
1QO3
HA12_MOUSE
UNP
1
P01900
1QO3
PDB
2
1QO3
B2MG_MOUSE
UNP
2
P01887
ENV_HV1B8
UNP
4
P04582
LY4A_MOUSE
UNP
3
P20937
1
1
1QO3
1
1
1QO3
A
1
1
1
26
301
1QO3
2
277
P01900
A
2
2
277
0
0
1QO3
0
0
1QO3
B
3
1
1
21
119
1QO3
1
99
P01887
B
4
2
100
311
320
1QO3
1
10
P04582
P
5
1
10
126
262
1QO3
126
262
P20937
C
6
1
137
126
262
1QO3
126
262
P20937
D
6
1
137
3
ASP
variant
ALA
85
1QO3
B
P01887
UNP
105
86
6
LYS
engineered mutation
SER
126
1QO3
C
P20937
UNP
126
1
6
ALA
variant
THR
166
1QO3
C
P20937
UNP
166
41
6
GLY
variant
ARG
223
1QO3
C
P20937
UNP
223
98
7
LYS
engineered mutation
SER
126
1QO3
D
P20937
UNP
126
1
7
ALA
variant
THR
166
1QO3
D
P20937
UNP
166
41
7
GLY
variant
ARG
223
1QO3
D
P20937
UNP
223
98
7
3
3
3
3
3
2
2
3
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
31
A
THR
31
A
ASP
37
A
ASP
37
A
ARG
21
A
ARG
21
A
VAL
28
A
VAL
28
A
HIS
3
A
HIS
3
A
VAL
12
A
VAL
12
A
THR
94
A
THR
94
A
VAL
103
A
VAL
103
A
LEU
109
A
LEU
109
A
TYR
118
A
TYR
118
A
CYS
121
A
CYS
121
A
LEU
126
A
LEU
126
A
TRP
133
A
TRP
133
A
ALA
135
A
ALA
135
A
LYS
186
A
LYS
186
A
ARG
193
A
ARG
193
A
VAL
199
A
VAL
199
A
LEU
206
A
LEU
206
A
LYS
243
A
LYS
243
A
VAL
249
A
VAL
249
A
THR
214
A
THR
214
A
LEU
219
A
LEU
219
A
TYR
257
A
TYR
257
A
GLU
262
A
GLU
262
A
LEU
270
A
LEU
270
A
LEU
272
A
LEU
272
B
GLN
6
B
GLN
7
B
SER
11
B
SER
12
B
PRO
20
B
PRO
21
B
THR
28
B
THR
29
B
ILE
64
B
ILE
65
B
THR
71
B
THR
72
B
GLU
36
B
GLU
37
B
LYS
41
B
LYS
42
B
TYR
78
B
TYR
79
B
LYS
83
B
LYS
84
B
LYS
91
B
LYS
92
B
TYR
94
B
TYR
95
C
VAL
141
C
VAL
16
C
TYR
146
C
TYR
21
C
LYS
149
C
LYS
24
C
VAL
154
C
VAL
29
C
CYS
251
C
CYS
126
C
ARG
256
C
ARG
131
C
LEU
199
C
LEU
74
C
ASP
202
C
ASP
77
C
ASP
207
C
ASP
82
C
TRP
210
C
TRP
85
C
CYS
232
C
CYS
107
C
LEU
235
C
LEU
110
C
LEU
240
C
LEU
115
C
GLY
243
C
GLY
118
D
VAL
141
D
VAL
16
D
TYR
146
D
TYR
21
D
LYS
149
D
LYS
24
D
VAL
154
D
VAL
29
D
CYS
251
D
CYS
126
D
ARG
256
D
ARG
131
D
LEU
199
D
LEU
74
D
ASP
202
D
ASP
77
D
ASP
207
D
ASP
82
D
TRP
210
D
TRP
85
D
CYS
232
D
CYS
107
D
LEU
235
D
LEU
110
D
LEU
240
D
LEU
115
D
GLY
243
D
GLY
118
BINDING SITE FOR RESIDUE EDO A 1276
A
EDO
1276
Software
2
BINDING SITE FOR RESIDUE EDO A 1277
A
EDO
1277
Software
7
BINDING SITE FOR RESIDUE EDO A 1278
A
EDO
1278
Software
4
A
ARG
170
A
ARG
170
2
1_555
C
HOH
2064
K
HOH
2
1_555
A
TRP
114
A
TRP
114
7
1_555
A
TRP
147
A
TRP
147
7
1_555
A
ALA
152
A
ALA
152
7
1_555
A
ASP
156
A
ASP
156
7
1_555
A
HOH
2157
I
HOH
7
1_555
P
ARG
5
E
ARG
5
7
1_555
P
VAL
8
E
VAL
8
7
1_555
A
HIS
188
A
HIS
188
4
1_555
A
TRP
204
A
TRP
204
4
1_555
B
PRO
14
B
PRO
15
4
1_555
B
HOH
2017
J
HOH
4
1_555
19
P 21 21 21