0.009212 0.005318 0.000000 0.000000 0.010637 0.000000 0.000000 0.000000 0.011046 0.00000 0.00000 0.00000 Li, Y. Mitaxov, V. Waksman, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 108.557 108.557 90.527 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O6 P 331.222 n 2',3'-DIDEOXY-GUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H16 N5 O12 P3 491.182 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE non-polymer C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 N C N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C Y 90 N C N 91 N N Y 92 N N Y 93 N C Y 94 N N Y 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 N C N 121 R C N 122 N N N 123 N C N 124 N O N 125 N N N 126 N C N 127 N N N 128 N C N 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N P N 146 N O N 147 N O N 148 N O N 149 N C N 150 S C N 151 N O N 152 N C N 153 N C N 154 R C Y 155 N N Y 156 N C Y 157 N N Y 158 N C N 159 N C N 160 N O N 161 N N N 162 N C N 163 N N N 164 N N Y 165 N C N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N O N 181 N P N 182 N O N 183 N O N 184 N O N 185 N C N 186 R C N 187 N O N 188 S C N 189 N O N 190 N C N 191 R C Y 192 N N Y 193 N C Y 194 N N Y 195 N C N 196 N C N 197 N O N 198 N N N 199 N C N 200 N N N 201 N N Y 202 N C N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N P N 218 N O N 219 N O N 220 N O N 221 N O N 222 R P N 223 N O N 224 N O N 225 N O N 226 R P N 227 N O N 228 N O N 229 N O N 230 N C N 231 S C N 232 N O N 233 N C N 234 N C N 235 R C Y 236 N N Y 237 N C Y 238 N N Y 239 N C N 240 N C N 241 N O N 242 N N N 243 N C N 244 N N N 245 N N Y 246 N C N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N O N 264 N P N 265 N O N 266 N O N 267 N O N 268 N C N 269 R C N 270 N O N 271 S C N 272 N O N 273 N C N 274 R C N 275 N N N 276 N C N 277 N O N 278 N N N 279 N C N 280 N O N 281 N C N 282 N C N 283 N C N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N N N 300 S C N 301 N C N 302 N O N 303 N C N 304 N C N 305 N C N 306 N O N 307 N N N 308 N O N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N N N 320 S C N 321 N C N 322 N O N 323 N C N 324 N C N 325 N C N 326 N O N 327 N O N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 N C N 340 N C N 341 N O N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N N Y 355 N C Y 356 N C Y 357 N N N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N O N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 S C N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C N 399 N C N 400 N C N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N C N 424 N N N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N N N 442 S C N 443 N C N 444 N O N 445 N C N 446 N C N 447 N S N 448 N C N 449 N O N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N MG N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C Y 467 N C Y 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N C N 473 N O N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N N N 486 S C N 487 N C N 488 N O N 489 N C N 490 N C N 491 N C N 492 N O N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N N N 503 S C N 504 N C N 505 N O N 506 N C N 507 N O N 508 N O N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N N N 517 S C N 518 N C N 519 N O N 520 R C N 521 N O N 522 N C N 523 N O N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N N N 534 S C N 535 N C N 536 N O N 537 N C Y 538 N C Y 539 N C Y 540 N C Y 541 N N Y 542 N C Y 543 N C Y 544 N C Y 545 N C Y 546 N C N 547 N O N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N N N 561 S C N 562 N C N 563 N O N 564 N C Y 565 N C Y 566 N C Y 567 N C Y 568 N C Y 569 N C Y 570 N C N 571 N O N 572 N O N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N H N 584 N N N 585 S C N 586 N C N 587 N O N 588 N C N 589 N C N 590 N C N 591 N O N 592 N H N 593 N H N 594 N H N 595 N H N 596 N H N 597 N H N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing Y 93 N sing Y 94 N sing Y 95 N doub N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N doub N 102 N sing N 103 N sing Y 104 N sing Y 105 N doub N 106 N sing Y 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing Y 165 N sing Y 166 N sing Y 167 N doub N 168 N sing Y 169 N sing N 170 N sing Y 171 N doub N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing Y 204 N sing Y 205 N sing Y 206 N doub N 207 N sing Y 208 N sing N 209 N sing Y 210 N doub N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N doub N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing Y 252 N sing Y 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing Y 258 N doub N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing Y 362 N sing Y 363 N doub Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing Y 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N doub N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N doub N 466 N sing N 467 N sing N 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N doub N 475 N sing Y 476 N doub N 477 N sing Y 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N doub N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N doub N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N doub N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N doub N 535 N sing N 536 N sing N 537 N sing N 538 N sing Y 539 N doub Y 540 N sing Y 541 N sing N 542 N sing Y 543 N doub Y 544 N sing Y 545 N sing N 546 N sing Y 547 N sing Y 548 N doub N 549 N sing Y 550 N doub N 551 N sing Y 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N doub N 563 N sing N 564 N sing N 565 N sing N 566 N sing Y 567 N doub Y 568 N sing Y 569 N sing N 570 N sing Y 571 N doub N 572 N sing Y 573 N doub N 574 N sing Y 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing N 580 N sing N 581 N sing N 582 N sing N 583 N sing N 584 N sing N 585 N sing N 586 N doub N 587 N sing N 588 N sing N 589 N sing N 590 N sing N 591 N sing N 592 N sing N 593 N sing N 594 N sing N 595 N sing N 596 N sing N 597 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 96 9491 9496 10.1073/pnas.96.17.9491 10449720 Structure-based design of Taq DNA polymerases with improved properties of dideoxynucleotide incorporation. 1999 10.2210/pdb1qss/pdb pdb_00001qss 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1998-01-01 RIGAKU RAXIS IV SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 3657.395 5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DDG))-3' 1 syn polymer 4257.754 5'-D(*AP*CP*CP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3' 1 syn polymer 60865.879 DNA POLYMERASE I 2.7.7.7 KLENOW FRAGMENT A348E 1 man polymer 24.305 MAGNESIUM ION 2 syn non-polymer 491.182 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE 1 syn non-polymer 18.015 water 154 nat water E.C.2.7.7.7 no yes (DG)(DA)(DC)(DC)(DA)(DC)(DG)(DG)(DC)(DG)(DC)(DDG) GACCACGGCGCG B polydeoxyribonucleotide no no (DA)(DC)(DC)(DG)(DC)(DG)(DC)(DC)(DG)(DT)(DG)(DG)(DT)(DC) ACCGCGCCGTGGTC C polydeoxyribonucleotide no no ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEERGLLAKDLSVLALREGLGLPPGDD PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAK ALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEERGLLAKDLSVLALREGLGLPPGDD PMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLD VAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKI LQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYS QIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAF IERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRL EEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermus Escherichia sample 271 Thermus aquaticus 562 Escherichia coli PLASMID PWB254 1 2.23 44.74 VAPOR DIFFUSION, HANGING DROP 7.5 HEPES, SODIUM ACETATE, PEG 4000, MANGANESE CHLORIDE, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 292K 292 HEPES 1 MANGANESE CHLORIDE 1 SODIUM ACETATE 1 PEG 4000 1 PEG 4000 2 -1.972 1 19 B 101 C 216 -0.938 B_DG101:DC216_C 1 -1.879 -0.162 -0.164 -0.164 7.090 1 20 B 102 C 215 -2.498 B_DA102:DT215_C 2 -6.088 -0.049 0.106 -0.100 6.458 1 19 B 103 C 214 0.830 B_DC103:DG214_C 3 -5.863 0.160 -0.284 -0.065 3.153 1 19 B 104 C 213 3.582 B_DC104:DG213_C 4 -6.910 0.081 -0.237 -0.024 -0.589 1 20 B 105 C 212 0.368 B_DA105:DT212_C 5 -4.853 -0.010 0.006 -0.176 1.417 1 19 B 106 C 211 -0.484 B_DC106:DG211_C 6 -2.886 0.215 0.124 -0.171 0.248 1 19 B 107 C 210 -1.457 B_DG107:DC210_C 7 -15.636 -0.098 0.101 0.090 -5.100 1 19 B 108 C 209 3.351 B_DG108:DC209_C 8 -4.999 -0.198 0.185 -0.054 9.375 1 19 B 109 C 208 -1.164 B_DC109:DG208_C 9 6.648 0.177 -0.709 -0.012 9.047 1 19 B 110 C 207 3.177 B_DG110:DC207_C 10 -13.539 -0.306 0.052 -0.158 6.187 1 19 B 111 C 206 1.008 B_DC111:DG206_C 11 -8.208 0.223 0.024 -0.179 6.338 1 19 B 112 C 205 2.809 B_DDG112:DC205_C 12 -11.344 -0.326 0.481 -0.142 2.818 36.090 B B 101 102 15.827 C C 216 215 3.095 9.682 -0.103 -0.651 BB_DG101DA102:DT215DC216_CC 1 -2.873 4.697 34.693 -2.315 -0.208 3.158 31.028 B B 102 103 3.880 C C 215 214 3.229 2.072 0.035 -0.862 BB_DA102DC103:DG214DT215_CC 2 2.638 -4.940 30.851 -2.001 0.432 2.533 31.456 B B 103 104 21.637 C C 214 213 3.185 11.463 -0.523 -1.321 BB_DC103DC104:DG213DG214_CC 3 -2.207 4.165 29.260 -4.383 0.591 3.657 33.931 B B 104 105 10.847 C C 213 212 3.514 6.291 -1.018 0.788 BB_DC104DA105:DT212DG213_CC 4 -2.247 3.875 33.286 0.233 1.345 3.111 34.972 B B 105 106 6.161 C C 212 211 3.185 3.696 0.316 -0.496 BB_DA105DC106:DG211DT212_CC 5 -0.714 1.190 34.776 -1.364 -0.630 3.291 35.034 B B 106 107 16.640 C C 211 210 3.276 9.885 0.331 0.471 BB_DC106DG107:DC210DG211_CC 6 1.667 -2.806 33.612 -0.742 -0.293 3.294 30.454 B B 107 108 6.239 C C 210 209 3.347 3.271 1.069 -0.598 BB_DG107DG108:DC209DC210_CC 7 0.870 -1.659 30.270 -1.803 -1.858 3.123 32.123 B B 108 109 3.734 C C 209 208 3.112 2.041 0.515 -0.166 BB_DG108DC109:DG208DC209_CC 8 8.526 -15.597 30.934 -0.656 0.555 3.255 41.667 B B 109 110 14.219 C C 208 207 3.367 9.920 -0.285 0.054 BB_DC109DG110:DC207DG208_CC 9 -10.611 15.210 39.159 -1.021 -0.771 3.294 29.028 B B 110 111 15.949 C C 207 206 3.808 7.897 -0.202 -1.395 BB_DG110DC111:DG206DC207_CC 10 0.519 -1.049 27.950 -4.708 0.530 2.728 31.151 B B 111 112 13.831 C C 206 205 3.191 7.353 0.135 -1.549 BB_DC111DDG112:DC205DG206_CC 11 -2.432 4.574 30.196 -4.174 -0.677 database_2 pdbx_struct_conn_angle struct_conn struct_conn_type struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 1999-08-16 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-11-03 1 4 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id DDCTP-TRAPPED CLOSED TERNARY COMPLEX OF KLENTAQ RCSB Y RCSB 1999-06-23 REL MG MAGNESIUM ION DG3 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE HOH water MG 1001 4 MG MG 1001 A MG 1002 4 MG MG 1002 A DG3 113 5 DG3 DG3 113 A TIP 3016 6 HOH HOH 3016 B TIP 3046 6 HOH HOH 3046 B TIP 3071 6 HOH HOH 3071 B TIP 3089 6 HOH HOH 3089 B TIP 3101 6 HOH HOH 3101 B TIP 3106 6 HOH HOH 3106 B TIP 3113 6 HOH HOH 3113 B TIP 3122 6 HOH HOH 3122 B TIP 3147 6 HOH HOH 3147 B TIP 3152 6 HOH HOH 3152 B TIP 3003 6 HOH HOH 3003 C TIP 3007 6 HOH HOH 3007 C TIP 3010 6 HOH HOH 3010 C TIP 3011 6 HOH HOH 3011 C TIP 3064 6 HOH HOH 3064 C TIP 3066 6 HOH HOH 3066 C TIP 3116 6 HOH HOH 3116 C TIP 3121 6 HOH HOH 3121 C TIP 3131 6 HOH HOH 3131 C TIP 3144 6 HOH HOH 3144 C TIP 3153 6 HOH HOH 3153 C TIP 3000 6 HOH HOH 3000 A TIP 3001 6 HOH HOH 3001 A TIP 3002 6 HOH HOH 3002 A TIP 3004 6 HOH HOH 3004 A TIP 3005 6 HOH HOH 3005 A TIP 3006 6 HOH HOH 3006 A TIP 3008 6 HOH HOH 3008 A TIP 3009 6 HOH HOH 3009 A TIP 3012 6 HOH HOH 3012 A TIP 3013 6 HOH HOH 3013 A TIP 3014 6 HOH HOH 3014 A TIP 3015 6 HOH HOH 3015 A TIP 3017 6 HOH HOH 3017 A TIP 3018 6 HOH HOH 3018 A TIP 3019 6 HOH HOH 3019 A TIP 3020 6 HOH HOH 3020 A TIP 3021 6 HOH HOH 3021 A TIP 3022 6 HOH HOH 3022 A TIP 3023 6 HOH HOH 3023 A TIP 3024 6 HOH HOH 3024 A TIP 3025 6 HOH HOH 3025 A TIP 3026 6 HOH HOH 3026 A TIP 3027 6 HOH HOH 3027 A TIP 3028 6 HOH HOH 3028 A TIP 3029 6 HOH HOH 3029 A TIP 3030 6 HOH HOH 3030 A TIP 3031 6 HOH HOH 3031 A TIP 3032 6 HOH HOH 3032 A TIP 3033 6 HOH HOH 3033 A TIP 3034 6 HOH HOH 3034 A TIP 3035 6 HOH HOH 3035 A TIP 3036 6 HOH HOH 3036 A TIP 3037 6 HOH HOH 3037 A TIP 3038 6 HOH HOH 3038 A TIP 3039 6 HOH HOH 3039 A TIP 3040 6 HOH HOH 3040 A TIP 3041 6 HOH HOH 3041 A TIP 3042 6 HOH HOH 3042 A TIP 3043 6 HOH HOH 3043 A TIP 3044 6 HOH HOH 3044 A TIP 3045 6 HOH HOH 3045 A TIP 3047 6 HOH HOH 3047 A TIP 3048 6 HOH HOH 3048 A TIP 3049 6 HOH HOH 3049 A TIP 3050 6 HOH HOH 3050 A TIP 3051 6 HOH HOH 3051 A TIP 3052 6 HOH HOH 3052 A TIP 3053 6 HOH HOH 3053 A TIP 3054 6 HOH HOH 3054 A TIP 3055 6 HOH HOH 3055 A TIP 3056 6 HOH HOH 3056 A TIP 3057 6 HOH HOH 3057 A TIP 3058 6 HOH HOH 3058 A TIP 3059 6 HOH HOH 3059 A TIP 3060 6 HOH HOH 3060 A TIP 3061 6 HOH HOH 3061 A TIP 3062 6 HOH HOH 3062 A TIP 3063 6 HOH HOH 3063 A TIP 3065 6 HOH HOH 3065 A TIP 3067 6 HOH HOH 3067 A TIP 3068 6 HOH HOH 3068 A TIP 3069 6 HOH HOH 3069 A TIP 3070 6 HOH HOH 3070 A TIP 3072 6 HOH HOH 3072 A TIP 3073 6 HOH HOH 3073 A TIP 3074 6 HOH HOH 3074 A TIP 3075 6 HOH HOH 3075 A TIP 3076 6 HOH HOH 3076 A TIP 3077 6 HOH HOH 3077 A TIP 3078 6 HOH HOH 3078 A TIP 3079 6 HOH HOH 3079 A TIP 3080 6 HOH HOH 3080 A TIP 3081 6 HOH HOH 3081 A TIP 3082 6 HOH HOH 3082 A TIP 3083 6 HOH HOH 3083 A TIP 3084 6 HOH HOH 3084 A TIP 3085 6 HOH HOH 3085 A TIP 3086 6 HOH HOH 3086 A TIP 3087 6 HOH HOH 3087 A TIP 3088 6 HOH HOH 3088 A TIP 3090 6 HOH HOH 3090 A TIP 3091 6 HOH HOH 3091 A TIP 3092 6 HOH HOH 3092 A TIP 3093 6 HOH HOH 3093 A TIP 3094 6 HOH HOH 3094 A TIP 3095 6 HOH HOH 3095 A TIP 3096 6 HOH HOH 3096 A TIP 3097 6 HOH HOH 3097 A TIP 3098 6 HOH HOH 3098 A TIP 3099 6 HOH HOH 3099 A TIP 3100 6 HOH HOH 3100 A TIP 3102 6 HOH HOH 3102 A TIP 3103 6 HOH HOH 3103 A TIP 3104 6 HOH HOH 3104 A TIP 3105 6 HOH HOH 3105 A TIP 3107 6 HOH HOH 3107 A TIP 3108 6 HOH HOH 3108 A TIP 3109 6 HOH HOH 3109 A TIP 3110 6 HOH HOH 3110 A TIP 3111 6 HOH HOH 3111 A TIP 3112 6 HOH HOH 3112 A TIP 3114 6 HOH HOH 3114 A TIP 3115 6 HOH HOH 3115 A TIP 3117 6 HOH HOH 3117 A TIP 3118 6 HOH HOH 3118 A TIP 3119 6 HOH HOH 3119 A TIP 3120 6 HOH HOH 3120 A TIP 3123 6 HOH HOH 3123 A TIP 3124 6 HOH HOH 3124 A TIP 3125 6 HOH HOH 3125 A TIP 3126 6 HOH HOH 3126 A TIP 3127 6 HOH HOH 3127 A TIP 3128 6 HOH HOH 3128 A TIP 3129 6 HOH HOH 3129 A TIP 3130 6 HOH HOH 3130 A TIP 3132 6 HOH HOH 3132 A TIP 3133 6 HOH HOH 3133 A TIP 3134 6 HOH HOH 3134 A TIP 3135 6 HOH HOH 3135 A TIP 3136 6 HOH HOH 3136 A TIP 3137 6 HOH HOH 3137 A TIP 3138 6 HOH HOH 3138 A TIP 3139 6 HOH HOH 3139 A TIP 3140 6 HOH HOH 3140 A TIP 3141 6 HOH HOH 3141 A TIP 3142 6 HOH HOH 3142 A TIP 3143 6 HOH HOH 3143 A TIP 3145 6 HOH HOH 3145 A TIP 3146 6 HOH HOH 3146 A TIP 3148 6 HOH HOH 3148 A TIP 3149 6 HOH HOH 3149 A TIP 3150 6 HOH HOH 3150 A TIP 3151 6 HOH HOH 3151 A GUA 101 n 1 DG 101 B ADE 102 n 2 DA 102 B CYT 103 n 3 DC 103 B CYT 104 n 4 DC 104 B ADE 105 n 5 DA 105 B CYT 106 n 6 DC 106 B GUA 107 n 7 DG 107 B GUA 108 n 8 DG 108 B CYT 109 n 9 DC 109 B GUA 110 n 10 DG 110 B CYT 111 n 11 DC 111 B DDG 112 n 12 DDG 112 B ADE 203 n 1 DA 203 C CYT 204 n 2 DC 204 C CYT 205 n 3 DC 205 C GUA 206 n 4 DG 206 C CYT 207 n 5 DC 207 C GUA 208 n 6 DG 208 C CYT 209 n 7 DC 209 C CYT 210 n 8 DC 210 C GUA 211 n 9 DG 211 C THY 212 n 10 DT 212 C GUA 213 n 11 DG 213 C GUA 214 n 12 DG 214 C THY 215 n 13 DT 215 C CYT 216 n 14 DC 216 C ALA 293 n 1 ALA 293 A LEU 294 n 2 LEU 294 A GLU 295 n 3 GLU 295 A GLU 296 n 4 GLU 296 A ALA 297 n 5 ALA 297 A PRO 298 n 6 PRO 298 A TRP 299 n 7 TRP 299 A PRO 300 n 8 PRO 300 A PRO 301 n 9 PRO 301 A PRO 302 n 10 PRO 302 A GLU 303 n 11 GLU 303 A GLY 304 n 12 GLY 304 A ALA 305 n 13 ALA 305 A PHE 306 n 14 PHE 306 A VAL 307 n 15 VAL 307 A GLY 308 n 16 GLY 308 A PHE 309 n 17 PHE 309 A VAL 310 n 18 VAL 310 A LEU 311 n 19 LEU 311 A SER 312 n 20 SER 312 A ARG 313 n 21 ARG 313 A LYS 314 n 22 LYS 314 A GLU 315 n 23 GLU 315 A PRO 316 n 24 PRO 316 A MET 317 n 25 MET 317 A TRP 318 n 26 TRP 318 A ALA 319 n 27 ALA 319 A ASP 320 n 28 ASP 320 A LEU 321 n 29 LEU 321 A LEU 322 n 30 LEU 322 A ALA 323 n 31 ALA 323 A LEU 324 n 32 LEU 324 A ALA 325 n 33 ALA 325 A ALA 326 n 34 ALA 326 A ALA 327 n 35 ALA 327 A ARG 328 n 36 ARG 328 A GLY 329 n 37 GLY 329 A GLY 330 n 38 GLY 330 A ARG 331 n 39 ARG 331 A VAL 332 n 40 VAL 332 A HIS 333 n 41 HIS 333 A ARG 334 n 42 ARG 334 A ALA 335 n 43 ALA 335 A PRO 336 n 44 PRO 336 A GLU 337 n 45 GLU 337 A PRO 338 n 46 PRO 338 A TYR 339 n 47 TYR 339 A LYS 340 n 48 LYS 340 A ALA 341 n 49 ALA 341 A LEU 342 n 50 LEU 342 A ARG 343 n 51 ARG 343 A ASP 344 n 52 ASP 344 A LEU 345 n 53 LEU 345 A LYS 346 n 54 LYS 346 A GLU 347 n 55 GLU 347 A GLU 348 n 56 GLU 348 A ARG 349 n 57 ARG 349 A GLY 350 n 58 GLY 350 A LEU 351 n 59 LEU 351 A LEU 352 n 60 LEU 352 A ALA 353 n 61 ALA 353 A LYS 354 n 62 LYS 354 A ASP 355 n 63 ASP 355 A LEU 356 n 64 LEU 356 A SER 357 n 65 SER 357 A VAL 358 n 66 VAL 358 A LEU 359 n 67 LEU 359 A ALA 360 n 68 ALA 360 A LEU 361 n 69 LEU 361 A ARG 362 n 70 ARG 362 A GLU 363 n 71 GLU 363 A GLY 364 n 72 GLY 364 A LEU 365 n 73 LEU 365 A GLY 366 n 74 GLY 366 A LEU 367 n 75 LEU 367 A PRO 368 n 76 PRO 368 A PRO 369 n 77 PRO 369 A GLY 370 n 78 GLY 370 A ASP 371 n 79 ASP 371 A ASP 372 n 80 ASP 372 A PRO 373 n 81 PRO 373 A MET 374 n 82 MET 374 A LEU 375 n 83 LEU 375 A LEU 376 n 84 LEU 376 A ALA 377 n 85 ALA 377 A TYR 378 n 86 TYR 378 A LEU 379 n 87 LEU 379 A LEU 380 n 88 LEU 380 A ASP 381 n 89 ASP 381 A PRO 382 n 90 PRO 382 A SER 383 n 91 SER 383 A ASN 384 n 92 ASN 384 A THR 385 n 93 THR 385 A THR 386 n 94 THR 386 A PRO 387 n 95 PRO 387 A GLU 388 n 96 GLU 388 A GLY 389 n 97 GLY 389 A VAL 390 n 98 VAL 390 A ALA 391 n 99 ALA 391 A ARG 392 n 100 ARG 392 A ARG 393 n 101 ARG 393 A TYR 394 n 102 TYR 394 A GLY 395 n 103 GLY 395 A GLY 396 n 104 GLY 396 A GLU 397 n 105 GLU 397 A TRP 398 n 106 TRP 398 A THR 399 n 107 THR 399 A GLU 400 n 108 GLU 400 A GLU 401 n 109 GLU 401 A ALA 402 n 110 ALA 402 A GLY 403 n 111 GLY 403 A GLU 404 n 112 GLU 404 A ARG 405 n 113 ARG 405 A ALA 406 n 114 ALA 406 A ALA 407 n 115 ALA 407 A LEU 408 n 116 LEU 408 A SER 409 n 117 SER 409 A GLU 410 n 118 GLU 410 A ARG 411 n 119 ARG 411 A LEU 412 n 120 LEU 412 A PHE 413 n 121 PHE 413 A ALA 414 n 122 ALA 414 A ASN 415 n 123 ASN 415 A LEU 416 n 124 LEU 416 A TRP 417 n 125 TRP 417 A GLY 418 n 126 GLY 418 A ARG 419 n 127 ARG 419 A LEU 420 n 128 LEU 420 A GLU 421 n 129 GLU 421 A GLY 422 n 130 GLY 422 A GLU 423 n 131 GLU 423 A GLU 424 n 132 GLU 424 A ARG 425 n 133 ARG 425 A LEU 426 n 134 LEU 426 A LEU 427 n 135 LEU 427 A TRP 428 n 136 TRP 428 A LEU 429 n 137 LEU 429 A TYR 430 n 138 TYR 430 A ARG 431 n 139 ARG 431 A GLU 432 n 140 GLU 432 A VAL 433 n 141 VAL 433 A GLU 434 n 142 GLU 434 A ARG 435 n 143 ARG 435 A PRO 436 n 144 PRO 436 A LEU 437 n 145 LEU 437 A SER 438 n 146 SER 438 A ALA 439 n 147 ALA 439 A VAL 440 n 148 VAL 440 A LEU 441 n 149 LEU 441 A ALA 442 n 150 ALA 442 A HIS 443 n 151 HIS 443 A MET 444 n 152 MET 444 A GLU 445 n 153 GLU 445 A ALA 446 n 154 ALA 446 A THR 447 n 155 THR 447 A GLY 448 n 156 GLY 448 A VAL 449 n 157 VAL 449 A ARG 450 n 158 ARG 450 A LEU 451 n 159 LEU 451 A ASP 452 n 160 ASP 452 A VAL 453 n 161 VAL 453 A ALA 454 n 162 ALA 454 A TYR 455 n 163 TYR 455 A LEU 456 n 164 LEU 456 A ARG 457 n 165 ARG 457 A ALA 458 n 166 ALA 458 A LEU 459 n 167 LEU 459 A SER 460 n 168 SER 460 A LEU 461 n 169 LEU 461 A GLU 462 n 170 GLU 462 A VAL 463 n 171 VAL 463 A ALA 464 n 172 ALA 464 A GLU 465 n 173 GLU 465 A GLU 466 n 174 GLU 466 A ILE 467 n 175 ILE 467 A ALA 468 n 176 ALA 468 A ARG 469 n 177 ARG 469 A LEU 470 n 178 LEU 470 A GLU 471 n 179 GLU 471 A ALA 472 n 180 ALA 472 A GLU 473 n 181 GLU 473 A VAL 474 n 182 VAL 474 A PHE 475 n 183 PHE 475 A ARG 476 n 184 ARG 476 A LEU 477 n 185 LEU 477 A ALA 478 n 186 ALA 478 A GLY 479 n 187 GLY 479 A HIS 480 n 188 HIS 480 A PRO 481 n 189 PRO 481 A PHE 482 n 190 PHE 482 A ASN 483 n 191 ASN 483 A LEU 484 n 192 LEU 484 A ASN 485 n 193 ASN 485 A SER 486 n 194 SER 486 A ARG 487 n 195 ARG 487 A ASP 488 n 196 ASP 488 A GLN 489 n 197 GLN 489 A LEU 490 n 198 LEU 490 A GLU 491 n 199 GLU 491 A ARG 492 n 200 ARG 492 A VAL 493 n 201 VAL 493 A LEU 494 n 202 LEU 494 A PHE 495 n 203 PHE 495 A ASP 496 n 204 ASP 496 A GLU 497 n 205 GLU 497 A LEU 498 n 206 LEU 498 A GLY 499 n 207 GLY 499 A LEU 500 n 208 LEU 500 A PRO 501 n 209 PRO 501 A ALA 502 n 210 ALA 502 A ILE 503 n 211 ILE 503 A GLY 504 n 212 GLY 504 A LYS 505 n 213 LYS 505 A THR 506 n 214 THR 506 A GLU 507 n 215 GLU 507 A LYS 508 n 216 LYS 508 A THR 509 n 217 THR 509 A GLY 510 n 218 GLY 510 A LYS 511 n 219 LYS 511 A ARG 512 n 220 ARG 512 A SER 513 n 221 SER 513 A THR 514 n 222 THR 514 A SER 515 n 223 SER 515 A ALA 516 n 224 ALA 516 A ALA 517 n 225 ALA 517 A VAL 518 n 226 VAL 518 A LEU 519 n 227 LEU 519 A GLU 520 n 228 GLU 520 A ALA 521 n 229 ALA 521 A LEU 522 n 230 LEU 522 A ARG 523 n 231 ARG 523 A GLU 524 n 232 GLU 524 A ALA 525 n 233 ALA 525 A HIS 526 n 234 HIS 526 A PRO 527 n 235 PRO 527 A ILE 528 n 236 ILE 528 A VAL 529 n 237 VAL 529 A GLU 530 n 238 GLU 530 A LYS 531 n 239 LYS 531 A ILE 532 n 240 ILE 532 A LEU 533 n 241 LEU 533 A GLN 534 n 242 GLN 534 A TYR 535 n 243 TYR 535 A ARG 536 n 244 ARG 536 A GLU 537 n 245 GLU 537 A LEU 538 n 246 LEU 538 A THR 539 n 247 THR 539 A LYS 540 n 248 LYS 540 A LEU 541 n 249 LEU 541 A LYS 542 n 250 LYS 542 A SER 543 n 251 SER 543 A THR 544 n 252 THR 544 A TYR 545 n 253 TYR 545 A ILE 546 n 254 ILE 546 A ASP 547 n 255 ASP 547 A PRO 548 n 256 PRO 548 A LEU 549 n 257 LEU 549 A PRO 550 n 258 PRO 550 A ASP 551 n 259 ASP 551 A LEU 552 n 260 LEU 552 A ILE 553 n 261 ILE 553 A HIS 554 n 262 HIS 554 A PRO 555 n 263 PRO 555 A ARG 556 n 264 ARG 556 A THR 557 n 265 THR 557 A GLY 558 n 266 GLY 558 A ARG 559 n 267 ARG 559 A LEU 560 n 268 LEU 560 A HIS 561 n 269 HIS 561 A THR 562 n 270 THR 562 A ARG 563 n 271 ARG 563 A PHE 564 n 272 PHE 564 A ASN 565 n 273 ASN 565 A GLN 566 n 274 GLN 566 A THR 567 n 275 THR 567 A ALA 568 n 276 ALA 568 A THR 569 n 277 THR 569 A ALA 570 n 278 ALA 570 A THR 571 n 279 THR 571 A GLY 572 n 280 GLY 572 A ARG 573 n 281 ARG 573 A LEU 574 n 282 LEU 574 A SER 575 n 283 SER 575 A SER 576 n 284 SER 576 A SER 577 n 285 SER 577 A ASP 578 n 286 ASP 578 A PRO 579 n 287 PRO 579 A ASN 580 n 288 ASN 580 A LEU 581 n 289 LEU 581 A GLN 582 n 290 GLN 582 A ASN 583 n 291 ASN 583 A ILE 584 n 292 ILE 584 A PRO 585 n 293 PRO 585 A VAL 586 n 294 VAL 586 A ARG 587 n 295 ARG 587 A THR 588 n 296 THR 588 A PRO 589 n 297 PRO 589 A LEU 590 n 298 LEU 590 A GLY 591 n 299 GLY 591 A GLN 592 n 300 GLN 592 A ARG 593 n 301 ARG 593 A ILE 594 n 302 ILE 594 A ARG 595 n 303 ARG 595 A ARG 596 n 304 ARG 596 A ALA 597 n 305 ALA 597 A PHE 598 n 306 PHE 598 A ILE 599 n 307 ILE 599 A ALA 600 n 308 ALA 600 A GLU 601 n 309 GLU 601 A GLU 602 n 310 GLU 602 A GLY 603 n 311 GLY 603 A TRP 604 n 312 TRP 604 A LEU 605 n 313 LEU 605 A LEU 606 n 314 LEU 606 A VAL 607 n 315 VAL 607 A ALA 608 n 316 ALA 608 A LEU 609 n 317 LEU 609 A ASP 610 n 318 ASP 610 A TYR 611 n 319 TYR 611 A SER 612 n 320 SER 612 A GLN 613 n 321 GLN 613 A ILE 614 n 322 ILE 614 A GLU 615 n 323 GLU 615 A LEU 616 n 324 LEU 616 A ARG 617 n 325 ARG 617 A VAL 618 n 326 VAL 618 A LEU 619 n 327 LEU 619 A ALA 620 n 328 ALA 620 A HIS 621 n 329 HIS 621 A LEU 622 n 330 LEU 622 A SER 623 n 331 SER 623 A GLY 624 n 332 GLY 624 A ASP 625 n 333 ASP 625 A GLU 626 n 334 GLU 626 A ASN 627 n 335 ASN 627 A LEU 628 n 336 LEU 628 A ILE 629 n 337 ILE 629 A ARG 630 n 338 ARG 630 A VAL 631 n 339 VAL 631 A PHE 632 n 340 PHE 632 A GLN 633 n 341 GLN 633 A GLU 634 n 342 GLU 634 A GLY 635 n 343 GLY 635 A ARG 636 n 344 ARG 636 A ASP 637 n 345 ASP 637 A ILE 638 n 346 ILE 638 A HIS 639 n 347 HIS 639 A THR 640 n 348 THR 640 A GLU 641 n 349 GLU 641 A THR 642 n 350 THR 642 A ALA 643 n 351 ALA 643 A SER 644 n 352 SER 644 A TRP 645 n 353 TRP 645 A MET 646 n 354 MET 646 A PHE 647 n 355 PHE 647 A GLY 648 n 356 GLY 648 A VAL 649 n 357 VAL 649 A PRO 650 n 358 PRO 650 A ARG 651 n 359 ARG 651 A GLU 652 n 360 GLU 652 A ALA 653 n 361 ALA 653 A VAL 654 n 362 VAL 654 A ASP 655 n 363 ASP 655 A PRO 656 n 364 PRO 656 A LEU 657 n 365 LEU 657 A MET 658 n 366 MET 658 A ARG 659 n 367 ARG 659 A ARG 660 n 368 ARG 660 A ALA 661 n 369 ALA 661 A ALA 662 n 370 ALA 662 A LYS 663 n 371 LYS 663 A THR 664 n 372 THR 664 A ILE 665 n 373 ILE 665 A ASN 666 n 374 ASN 666 A PHE 667 n 375 PHE 667 A GLY 668 n 376 GLY 668 A VAL 669 n 377 VAL 669 A LEU 670 n 378 LEU 670 A TYR 671 n 379 TYR 671 A GLY 672 n 380 GLY 672 A MET 673 n 381 MET 673 A SER 674 n 382 SER 674 A ALA 675 n 383 ALA 675 A HIS 676 n 384 HIS 676 A ARG 677 n 385 ARG 677 A LEU 678 n 386 LEU 678 A SER 679 n 387 SER 679 A GLN 680 n 388 GLN 680 A GLU 681 n 389 GLU 681 A LEU 682 n 390 LEU 682 A ALA 683 n 391 ALA 683 A ILE 684 n 392 ILE 684 A PRO 685 n 393 PRO 685 A TYR 686 n 394 TYR 686 A GLU 687 n 395 GLU 687 A GLU 688 n 396 GLU 688 A ALA 689 n 397 ALA 689 A GLN 690 n 398 GLN 690 A ALA 691 n 399 ALA 691 A PHE 692 n 400 PHE 692 A ILE 693 n 401 ILE 693 A GLU 694 n 402 GLU 694 A ARG 695 n 403 ARG 695 A TYR 696 n 404 TYR 696 A PHE 697 n 405 PHE 697 A GLN 698 n 406 GLN 698 A SER 699 n 407 SER 699 A PHE 700 n 408 PHE 700 A PRO 701 n 409 PRO 701 A LYS 702 n 410 LYS 702 A VAL 703 n 411 VAL 703 A ARG 704 n 412 ARG 704 A ALA 705 n 413 ALA 705 A TRP 706 n 414 TRP 706 A ILE 707 n 415 ILE 707 A GLU 708 n 416 GLU 708 A LYS 709 n 417 LYS 709 A THR 710 n 418 THR 710 A LEU 711 n 419 LEU 711 A GLU 712 n 420 GLU 712 A GLU 713 n 421 GLU 713 A GLY 714 n 422 GLY 714 A ARG 715 n 423 ARG 715 A ARG 716 n 424 ARG 716 A ARG 717 n 425 ARG 717 A GLY 718 n 426 GLY 718 A TYR 719 n 427 TYR 719 A VAL 720 n 428 VAL 720 A GLU 721 n 429 GLU 721 A THR 722 n 430 THR 722 A LEU 723 n 431 LEU 723 A PHE 724 n 432 PHE 724 A GLY 725 n 433 GLY 725 A ARG 726 n 434 ARG 726 A ARG 727 n 435 ARG 727 A ARG 728 n 436 ARG 728 A TYR 729 n 437 TYR 729 A VAL 730 n 438 VAL 730 A PRO 731 n 439 PRO 731 A ASP 732 n 440 ASP 732 A LEU 733 n 441 LEU 733 A GLU 734 n 442 GLU 734 A ALA 735 n 443 ALA 735 A ARG 736 n 444 ARG 736 A VAL 737 n 445 VAL 737 A LYS 738 n 446 LYS 738 A SER 739 n 447 SER 739 A VAL 740 n 448 VAL 740 A ARG 741 n 449 ARG 741 A GLU 742 n 450 GLU 742 A ALA 743 n 451 ALA 743 A ALA 744 n 452 ALA 744 A GLU 745 n 453 GLU 745 A ARG 746 n 454 ARG 746 A MET 747 n 455 MET 747 A ALA 748 n 456 ALA 748 A PHE 749 n 457 PHE 749 A ASN 750 n 458 ASN 750 A MET 751 n 459 MET 751 A PRO 752 n 460 PRO 752 A VAL 753 n 461 VAL 753 A GLN 754 n 462 GLN 754 A GLY 755 n 463 GLY 755 A THR 756 n 464 THR 756 A ALA 757 n 465 ALA 757 A ALA 758 n 466 ALA 758 A ASP 759 n 467 ASP 759 A LEU 760 n 468 LEU 760 A MET 761 n 469 MET 761 A LYS 762 n 470 LYS 762 A LEU 763 n 471 LEU 763 A ALA 764 n 472 ALA 764 A MET 765 n 473 MET 765 A VAL 766 n 474 VAL 766 A LYS 767 n 475 LYS 767 A LEU 768 n 476 LEU 768 A PHE 769 n 477 PHE 769 A PRO 770 n 478 PRO 770 A ARG 771 n 479 ARG 771 A LEU 772 n 480 LEU 772 A GLU 773 n 481 GLU 773 A GLU 774 n 482 GLU 774 A MET 775 n 483 MET 775 A GLY 776 n 484 GLY 776 A ALA 777 n 485 ALA 777 A ARG 778 n 486 ARG 778 A MET 779 n 487 MET 779 A LEU 780 n 488 LEU 780 A LEU 781 n 489 LEU 781 A GLN 782 n 490 GLN 782 A VAL 783 n 491 VAL 783 A HIS 784 n 492 HIS 784 A ASP 785 n 493 ASP 785 A GLU 786 n 494 GLU 786 A LEU 787 n 495 LEU 787 A VAL 788 n 496 VAL 788 A LEU 789 n 497 LEU 789 A GLU 790 n 498 GLU 790 A ALA 791 n 499 ALA 791 A PRO 792 n 500 PRO 792 A LYS 793 n 501 LYS 793 A GLU 794 n 502 GLU 794 A ARG 795 n 503 ARG 795 A ALA 796 n 504 ALA 796 A GLU 797 n 505 GLU 797 A ALA 798 n 506 ALA 798 A VAL 799 n 507 VAL 799 A ALA 800 n 508 ALA 800 A ARG 801 n 509 ARG 801 A LEU 802 n 510 LEU 802 A ALA 803 n 511 ALA 803 A LYS 804 n 512 LYS 804 A GLU 805 n 513 GLU 805 A VAL 806 n 514 VAL 806 A MET 807 n 515 MET 807 A GLU 808 n 516 GLU 808 A GLY 809 n 517 GLY 809 A VAL 810 n 518 VAL 810 A TYR 811 n 519 TYR 811 A PRO 812 n 520 PRO 812 A LEU 813 n 521 LEU 813 A ALA 814 n 522 ALA 814 A VAL 815 n 523 VAL 815 A PRO 816 n 524 PRO 816 A LEU 817 n 525 LEU 817 A GLU 818 n 526 GLU 818 A VAL 819 n 527 VAL 819 A GLU 820 n 528 GLU 820 A VAL 821 n 529 VAL 821 A GLY 822 n 530 GLY 822 A ILE 823 n 531 ILE 823 A GLY 824 n 532 GLY 824 A GLU 825 n 533 GLU 825 A ASP 826 n 534 ASP 826 A TRP 827 n 535 TRP 827 A LEU 828 n 536 LEU 828 A SER 829 n 537 SER 829 A ALA 830 n 538 ALA 830 A LYS 831 n 539 LYS 831 A author_defined_assembly 3 trimeric A DG3 113 F O2G DG3 1_555 A MG 1001 D MG MG 1_555 A DG3 113 F O2B DG3 1_555 94.8 A DG3 113 F O2G DG3 1_555 A MG 1001 D MG MG 1_555 A DG3 113 F O2A DG3 1_555 133.2 A DG3 113 F O2B DG3 1_555 A MG 1001 D MG MG 1_555 A DG3 113 F O2A DG3 1_555 79.4 A DG3 113 F O2G DG3 1_555 A MG 1001 D MG MG 1_555 A ASP 610 C OD2 ASP 318 1_555 107.8 A DG3 113 F O2B DG3 1_555 A MG 1001 D MG MG 1_555 A ASP 610 C OD2 ASP 318 1_555 154.8 A DG3 113 F O2A DG3 1_555 A MG 1001 D MG MG 1_555 A ASP 610 C OD2 ASP 318 1_555 92.5 A DG3 113 F O2G DG3 1_555 A MG 1001 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 68.5 A DG3 113 F O2B DG3 1_555 A MG 1001 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 90.5 A DG3 113 F O2A DG3 1_555 A MG 1001 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 156.4 A ASP 610 C OD2 ASP 318 1_555 A MG 1001 D MG MG 1_555 A TYR 611 C O TYR 319 1_555 87.7 A DG3 113 F O2G DG3 1_555 A MG 1001 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 150.7 A DG3 113 F O2B DG3 1_555 A MG 1001 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 69.9 A DG3 113 F O2A DG3 1_555 A MG 1001 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 70.2 A ASP 610 C OD2 ASP 318 1_555 A MG 1001 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 84.9 A TYR 611 C O TYR 319 1_555 A MG 1001 D MG MG 1_555 A ASP 785 C OD2 ASP 493 1_555 86.3 A DG3 113 F O2A DG3 1_555 A MG 1002 E MG MG 1_555 A ASP 610 C OD2 ASP 318 1_555 75.6 A DG3 113 F O2A DG3 1_555 A MG 1002 E MG MG 1_555 A ASP 610 C OD1 ASP 318 1_555 98.0 A ASP 610 C OD2 ASP 318 1_555 A MG 1002 E MG MG 1_555 A ASP 610 C OD1 ASP 318 1_555 44.0 A DG3 113 F O2A DG3 1_555 A MG 1002 E MG MG 1_555 A ASP 785 C OD1 ASP 493 1_555 66.6 A ASP 610 C OD2 ASP 318 1_555 A MG 1002 E MG MG 1_555 A ASP 785 C OD1 ASP 493 1_555 72.9 A ASP 610 C OD1 ASP 318 1_555 A MG 1002 E MG MG 1_555 A ASP 785 C OD1 ASP 493 1_555 116.5 A DG3 113 F O2A DG3 1_555 A MG 1002 E MG MG 1_555 A HOH 3015 I O HOH 1_555 82.4 A ASP 610 C OD2 ASP 318 1_555 A MG 1002 E MG MG 1_555 A HOH 3015 I O HOH 1_555 115.3 A ASP 610 C OD1 ASP 318 1_555 A MG 1002 E MG MG 1_555 A HOH 3015 I O HOH 1_555 81.8 A ASP 785 C OD1 ASP 493 1_555 A MG 1002 E MG MG 1_555 A HOH 3015 I O HOH 1_555 145.3 A DG3 113 F O2A DG3 1_555 A MG 1002 E MG MG 1_555 A HOH 3023 I O HOH 1_555 140.1 A ASP 610 C OD2 ASP 318 1_555 A MG 1002 E MG MG 1_555 A HOH 3023 I O HOH 1_555 143.6 A ASP 610 C OD1 ASP 318 1_555 A MG 1002 E MG MG 1_555 A HOH 3023 I O HOH 1_555 116.6 A ASP 785 C OD1 ASP 493 1_555 A MG 1002 E MG MG 1_555 A HOH 3023 I O HOH 1_555 110.0 A HOH 3015 I O HOH 1_555 A MG 1002 E MG MG 1_555 A HOH 3023 I O HOH 1_555 83.5 B DDG 112 A DDG 12 DG 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 295 C O GLU 3 A N VAL 332 C N VAL 40 A N ALA 335 C N ALA 43 A O LEU 324 C O LEU 32 A O ALA 327 C O ALA 35 A N PHE 306 C N PHE 14 A O ARG 450 C O ARG 158 A N ILE 599 C N ILE 307 A N ASN 565 C N ASN 273 A O SER 575 C O SER 283 A O LEU 781 C O LEU 489 A N VAL 788 C N VAL 496 A N ALA 791 C N ALA 499 A O LEU 605 C O LEU 313 A O ASP 610 C O ASP 318 A N GLU 794 C N GLU 502 A O VAL 720 C O VAL 428 A N ARG 728 C N ARG 436 1 A CG GLU 295 C CG GLU 3 1 Y 1 A CD GLU 295 C CD GLU 3 1 Y 1 A OE1 GLU 295 C OE1 GLU 3 1 Y 1 A OE2 GLU 295 C OE2 GLU 3 1 Y 1 A CG GLU 303 C CG GLU 11 1 Y 1 A CD GLU 303 C CD GLU 11 1 Y 1 A OE1 GLU 303 C OE1 GLU 11 1 Y 1 A OE2 GLU 303 C OE2 GLU 11 1 Y 1 A CG ARG 331 C CG ARG 39 1 Y 1 A CD ARG 331 C CD ARG 39 1 Y 1 A NE ARG 331 C NE ARG 39 1 Y 1 A CZ ARG 331 C CZ ARG 39 1 Y 1 A NH1 ARG 331 C NH1 ARG 39 1 Y 1 A NH2 ARG 331 C NH2 ARG 39 1 Y 1 A CG LYS 346 C CG LYS 54 1 Y 1 A CD LYS 346 C CD LYS 54 1 Y 1 A CE LYS 346 C CE LYS 54 1 Y 1 A NZ LYS 346 C NZ LYS 54 1 Y 1 A CG GLU 348 C CG GLU 56 1 Y 1 A CD GLU 348 C CD GLU 56 1 Y 1 A OE1 GLU 348 C OE1 GLU 56 1 Y 1 A OE2 GLU 348 C OE2 GLU 56 1 Y 1 A CG ARG 392 C CG ARG 100 1 Y 1 A CD ARG 392 C CD ARG 100 1 Y 1 A NE ARG 392 C NE ARG 100 1 Y 1 A CZ ARG 392 C CZ ARG 100 1 Y 1 A NH1 ARG 392 C NH1 ARG 100 1 Y 1 A NH2 ARG 392 C NH2 ARG 100 1 Y 1 A CG GLU 421 C CG GLU 129 1 Y 1 A CD GLU 421 C CD GLU 129 1 Y 1 A OE1 GLU 421 C OE1 GLU 129 1 Y 1 A OE2 GLU 421 C OE2 GLU 129 1 Y 1 A CG GLU 424 C CG GLU 132 1 Y 1 A CD GLU 424 C CD GLU 132 1 Y 1 A OE1 GLU 424 C OE1 GLU 132 1 Y 1 A OE2 GLU 424 C OE2 GLU 132 1 Y 1 A CG ARG 523 C CG ARG 231 1 Y 1 A CD ARG 523 C CD ARG 231 1 Y 1 A NE ARG 523 C NE ARG 231 1 Y 1 A CZ ARG 523 C CZ ARG 231 1 Y 1 A NH1 ARG 523 C NH1 ARG 231 1 Y 1 A NH2 ARG 523 C NH2 ARG 231 1 Y 1 A CG GLU 530 C CG GLU 238 1 Y 1 A CD GLU 530 C CD GLU 238 1 Y 1 A OE1 GLU 530 C OE1 GLU 238 1 Y 1 A OE2 GLU 530 C OE2 GLU 238 1 Y 1 A CG ASN 627 C CG ASN 335 1 Y 1 A OD1 ASN 627 C OD1 ASN 335 1 Y 1 A ND2 ASN 627 C ND2 ASN 335 1 Y 1 A CG ARG 630 C CG ARG 338 1 Y 1 A CD ARG 630 C CD ARG 338 1 Y 1 A NE ARG 630 C NE ARG 338 1 Y 1 A CZ ARG 630 C CZ ARG 338 1 Y 1 A NH1 ARG 630 C NH1 ARG 338 1 Y 1 A NH2 ARG 630 C NH2 ARG 338 1 Y 1 A CG GLU 634 C CG GLU 342 1 Y 1 A CD GLU 634 C CD GLU 342 1 Y 1 A OE1 GLU 634 C OE1 GLU 342 1 Y 1 A OE2 GLU 634 C OE2 GLU 342 1 Y 1 A CG GLU 687 C CG GLU 395 1 Y 1 A CD GLU 687 C CD GLU 395 1 Y 1 A OE1 GLU 687 C OE1 GLU 395 1 Y 1 A OE2 GLU 687 C OE2 GLU 395 1 Y 1 A CG GLU 688 C CG GLU 396 1 Y 1 A CD GLU 688 C CD GLU 396 1 Y 1 A OE1 GLU 688 C OE1 GLU 396 1 Y 1 A OE2 GLU 688 C OE2 GLU 396 1 Y 1 A CG GLU 694 C CG GLU 402 1 Y 1 A CD GLU 694 C CD GLU 402 1 Y 1 A OE1 GLU 694 C OE1 GLU 402 1 Y 1 A OE2 GLU 694 C OE2 GLU 402 1 Y 1 A CG ARG 695 C CG ARG 403 1 Y 1 A CD ARG 695 C CD ARG 403 1 Y 1 A NE ARG 695 C NE ARG 403 1 Y 1 A CZ ARG 695 C CZ ARG 403 1 Y 1 A NH1 ARG 695 C NH1 ARG 403 1 Y 1 A NH2 ARG 695 C NH2 ARG 403 1 Y 1 A CG GLN 698 C CG GLN 406 1 Y 1 A CD GLN 698 C CD GLN 406 1 Y 1 A OE1 GLN 698 C OE1 GLN 406 1 Y 1 A NE2 GLN 698 C NE2 GLN 406 1 Y 1 A OG SER 699 C OG SER 407 1 Y 1 A CG ARG 704 C CG ARG 412 1 Y 1 A CD ARG 704 C CD ARG 412 1 Y 1 A NE ARG 704 C NE ARG 412 1 Y 1 A CZ ARG 704 C CZ ARG 412 1 Y 1 A NH1 ARG 704 C NH1 ARG 412 1 Y 1 A NH2 ARG 704 C NH2 ARG 412 1 Y 1 A CG LYS 709 C CG LYS 417 1 Y 1 A CD LYS 709 C CD LYS 417 1 Y 1 A CE LYS 709 C CE LYS 417 1 Y 1 A NZ LYS 709 C NZ LYS 417 1 Y 1 A CG ARG 716 C CG ARG 424 1 Y 1 A CD ARG 716 C CD ARG 424 1 Y 1 A NE ARG 716 C NE ARG 424 1 Y 1 A CZ ARG 716 C CZ ARG 424 1 Y 1 A NH1 ARG 716 C NH1 ARG 424 1 Y 1 A NH2 ARG 716 C NH2 ARG 424 1 Y 1 A CG GLU 774 C CG GLU 482 1 Y 1 A CD GLU 774 C CD GLU 482 1 Y 1 A OE1 GLU 774 C OE1 GLU 482 1 Y 1 A OE2 GLU 774 C OE2 GLU 482 1 Y 1 A CG LYS 793 C CG LYS 501 1 Y 1 A CD LYS 793 C CD LYS 501 1 Y 1 A CE LYS 793 C CE LYS 501 1 Y 1 A NZ LYS 793 C NZ LYS 501 1 Y 1 A CG GLU 794 C CG GLU 502 1 Y 1 A CD GLU 794 C CD GLU 502 1 Y 1 A OE1 GLU 794 C OE1 GLU 502 1 Y 1 A OE2 GLU 794 C OE2 GLU 502 1 Y 1 A A O O HOH HOH 3119 3128 1.84 1 C DG 214 0.051 SIDE CHAIN 1 1.85 0.30 108.30 110.15 B B B O4' C1' N1 DC DC DC 111 111 111 N 1 -20.40 2.70 111.00 90.60 A A A N CA C ASP ASP ASP 578 578 578 N 1 -15.21 1.50 119.30 104.09 A A A C N CA ASP PRO PRO 578 579 579 Y 1 15.64 2.10 128.40 144.04 A A A C N CD ASP PRO PRO 578 579 579 Y 1 A A NH2 NH2 ARG ARG 596 596 2.19 1_555 4_555 1 A TRP 299 -24.09 -66.05 1 A PRO 300 -43.40 100.01 1 A PRO 302 -56.42 -118.16 1 A ASP 381 -164.46 109.67 1 A PRO 382 -63.34 1.70 1 A THR 399 -107.32 -150.39 1 A HIS 480 176.89 148.42 1 A TYR 545 -130.32 -57.09 1 A ASP 578 62.26 -132.39 1 A VAL 586 -171.42 -17.68 1 A GLN 613 29.90 51.84 1 A GLU 652 -35.97 -29.44 1 A ASP 732 -66.71 10.18 1 A HIS 784 68.88 -60.81 1 A TYR 811 -164.40 99.00 0.2850000 0.2280000 0.2280000 2.30 30.0 1319 27317 26114 5 94.0 RANDOM 1 2.0 ENGH & HUBER 2.30 30.0 154 4887 32 525 4176 0.009 1.6 11.5 2.3 30.0 1QSS 27317 27317 0.0 0.0 0.1030000 1 11.3 7.09 98.2 0.3980000 2.30 2.38 2.2 95.5 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS DDGTP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 6 N N 6 N N 6 N N A GLU 337 C GLU 45 HELX_P A LEU 345 C LEU 53 1 1 9 A LEU 352 C LEU 60 HELX_P A GLU 363 C GLU 71 1 2 12 A ASP 372 C ASP 80 HELX_P A ASP 381 C ASP 89 1 3 10 A THR 386 C THR 94 HELX_P A GLY 395 C GLY 103 1 4 10 A GLU 401 C GLU 109 HELX_P A ARG 419 C ARG 127 1 5 19 A GLU 423 C GLU 131 HELX_P A VAL 433 C VAL 141 1 6 11 A VAL 433 C VAL 141 HELX_P A GLY 448 C GLY 156 1 7 16 A ASP 452 C ASP 160 HELX_P A GLY 479 C GLY 187 1 8 28 A SER 486 C SER 194 HELX_P A ASP 496 C ASP 204 1 9 11 A SER 515 C SER 223 HELX_P A LEU 522 C LEU 230 1 10 8 A PRO 527 C PRO 235 HELX_P A TYR 545 C TYR 253 1 11 19 A PRO 548 C PRO 256 HELX_P A ILE 553 C ILE 261 5 12 6 A THR 588 C THR 296 HELX_P A ARG 596 C ARG 304 1 13 9 A GLN 613 C GLN 321 HELX_P A GLY 624 C GLY 332 1 14 12 A ASP 625 C ASP 333 HELX_P A GLU 634 C GLU 342 1 15 10 A ASP 637 C ASP 345 HELX_P A PHE 647 C PHE 355 1 16 11 A PRO 650 C PRO 358 HELX_P A VAL 654 C VAL 362 5 17 5 A ASP 655 C ASP 363 HELX_P A TYR 671 C TYR 379 1 18 17 A SER 674 C SER 382 HELX_P A ALA 683 C ALA 391 1 19 10 A PRO 685 C PRO 393 HELX_P A PHE 700 C PHE 408 1 20 16 A PHE 700 C PHE 408 HELX_P A GLY 718 C GLY 426 1 21 19 A PRO 731 C PRO 439 HELX_P A ALA 735 C ALA 443 5 22 5 A VAL 737 C VAL 445 HELX_P A MET 775 C MET 483 1 23 39 A LYS 793 C LYS 501 HELX_P A VAL 810 C VAL 518 1 24 18 A ASP 826 C ASP 534 HELX_P A LYS 831 C LYS 539 1 25 6 covale 1.607 both B DC 111 A O3' DC 11 1_555 B DDG 112 A P DDG 12 1_555 metalc 2.368 A DG3 113 F O2G DG3 1_555 A MG 1001 D MG MG 1_555 metalc 2.278 A DG3 113 F O2B DG3 1_555 A MG 1001 D MG MG 1_555 metalc 2.536 A DG3 113 F O2A DG3 1_555 A MG 1001 D MG MG 1_555 metalc 2.285 A DG3 113 F O2A DG3 1_555 A MG 1002 E MG MG 1_555 metalc 2.095 A ASP 610 C OD2 ASP 318 1_555 A MG 1001 D MG MG 1_555 metalc 3.093 A ASP 610 C OD2 ASP 318 1_555 A MG 1002 E MG MG 1_555 metalc 2.632 A ASP 610 C OD1 ASP 318 1_555 A MG 1002 E MG MG 1_555 metalc 2.391 A TYR 611 C O TYR 319 1_555 A MG 1001 D MG MG 1_555 metalc 2.300 A ASP 785 C OD2 ASP 493 1_555 A MG 1001 D MG MG 1_555 metalc 2.298 A ASP 785 C OD1 ASP 493 1_555 A MG 1002 E MG MG 1_555 metalc 2.750 A MG 1002 E MG MG 1_555 A HOH 3015 I O HOH 1_555 metalc 2.354 A MG 1002 E MG MG 1_555 A HOH 3023 I O HOH 1_555 hydrog WATSON-CRICK B DG 101 A N1 DG 1 1_555 C DC 216 B N3 DC 14 1_555 hydrog WATSON-CRICK B DG 101 A N2 DG 1 1_555 C DC 216 B O2 DC 14 1_555 hydrog WATSON-CRICK B DG 101 A O6 DG 1 1_555 C DC 216 B N4 DC 14 1_555 hydrog WATSON-CRICK B DA 102 A N1 DA 2 1_555 C DT 215 B N3 DT 13 1_555 hydrog WATSON-CRICK B DA 102 A N6 DA 2 1_555 C DT 215 B O4 DT 13 1_555 hydrog WATSON-CRICK B DC 103 A N3 DC 3 1_555 C DG 214 B N1 DG 12 1_555 hydrog WATSON-CRICK B DC 103 A N4 DC 3 1_555 C DG 214 B O6 DG 12 1_555 hydrog WATSON-CRICK B DC 103 A O2 DC 3 1_555 C DG 214 B N2 DG 12 1_555 hydrog WATSON-CRICK B DC 104 A N3 DC 4 1_555 C DG 213 B N1 DG 11 1_555 hydrog WATSON-CRICK B DC 104 A N4 DC 4 1_555 C DG 213 B O6 DG 11 1_555 hydrog WATSON-CRICK B DC 104 A O2 DC 4 1_555 C DG 213 B N2 DG 11 1_555 hydrog WATSON-CRICK B DA 105 A N1 DA 5 1_555 C DT 212 B N3 DT 10 1_555 hydrog WATSON-CRICK B DA 105 A N6 DA 5 1_555 C DT 212 B O4 DT 10 1_555 hydrog WATSON-CRICK B DC 106 A N3 DC 6 1_555 C DG 211 B N1 DG 9 1_555 hydrog WATSON-CRICK B DC 106 A N4 DC 6 1_555 C DG 211 B O6 DG 9 1_555 hydrog WATSON-CRICK B DC 106 A O2 DC 6 1_555 C DG 211 B N2 DG 9 1_555 hydrog WATSON-CRICK B DG 107 A N1 DG 7 1_555 C DC 210 B N3 DC 8 1_555 hydrog WATSON-CRICK B DG 107 A N2 DG 7 1_555 C DC 210 B O2 DC 8 1_555 hydrog WATSON-CRICK B DG 107 A O6 DG 7 1_555 C DC 210 B N4 DC 8 1_555 hydrog WATSON-CRICK B DG 108 A N1 DG 8 1_555 C DC 209 B N3 DC 7 1_555 hydrog WATSON-CRICK B DG 108 A N2 DG 8 1_555 C DC 209 B O2 DC 7 1_555 hydrog WATSON-CRICK B DG 108 A O6 DG 8 1_555 C DC 209 B N4 DC 7 1_555 hydrog WATSON-CRICK B DC 109 A N3 DC 9 1_555 C DG 208 B N1 DG 6 1_555 hydrog WATSON-CRICK B DC 109 A N4 DC 9 1_555 C DG 208 B O6 DG 6 1_555 hydrog WATSON-CRICK B DC 109 A O2 DC 9 1_555 C DG 208 B N2 DG 6 1_555 hydrog WATSON-CRICK B DG 110 A N1 DG 10 1_555 C DC 207 B N3 DC 5 1_555 hydrog WATSON-CRICK B DG 110 A N2 DG 10 1_555 C DC 207 B O2 DC 5 1_555 hydrog WATSON-CRICK B DG 110 A O6 DG 10 1_555 C DC 207 B N4 DC 5 1_555 hydrog WATSON-CRICK B DC 111 A N3 DC 11 1_555 C DG 206 B N1 DG 4 1_555 hydrog WATSON-CRICK B DC 111 A N4 DC 11 1_555 C DG 206 B O6 DG 4 1_555 hydrog WATSON-CRICK B DC 111 A O2 DC 11 1_555 C DG 206 B N2 DG 4 1_555 hydrog WATSON-CRICK B DDG 112 A N1 DDG 12 1_555 C DC 205 B N3 DC 3 1_555 hydrog WATSON-CRICK B DDG 112 A N2 DDG 12 1_555 C DC 205 B O2 DC 3 1_555 hydrog WATSON-CRICK B DDG 112 A O6 DDG 12 1_555 C DC 205 B N4 DC 3 1_555 Transferase/DNA PROTEIN-DNA COMPLEX, CLOSED, Polymerase/DNA, Transferase-DNA COMPLEX DPO1_THEAQ UNP 3 P19821 1QSS PDB 1 1QSS 1QSS PDB 2 1QSS 293 831 1QSS 293 831 P19821 A 1 1 539 101 112 1QSS 101 112 1QSS B 2 1 12 203 216 1QSS 203 216 1QSS C 3 1 14 1 ALA engineered mutation GLU 348 1QSS A P19821 UNP 348 56 4 2 2 4 2 parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 295 C GLU 3 A PRO 298 C PRO 6 A ARG 331 C ARG 39 A ALA 335 C ALA 43 A LEU 321 C LEU 29 A ARG 328 C ARG 36 A PHE 306 C PHE 14 A LEU 311 C LEU 19 A ARG 450 C ARG 158 A LEU 451 C LEU 159 A PHE 598 C PHE 306 A ILE 599 C ILE 307 A ARG 563 C ARG 271 A ASN 565 C ASN 273 A SER 575 C SER 283 A SER 577 C SER 285 A ARG 778 C ARG 486 A GLN 782 C GLN 490 A GLU 786 C GLU 494 A PRO 792 C PRO 500 A TRP 604 C TRP 312 A TYR 611 C TYR 319 A VAL 819 C VAL 527 A GLY 824 C GLY 532 A TYR 719 C TYR 427 A GLU 721 C GLU 429 A ARG 727 C ARG 435 A TYR 729 C TYR 437 BINDING SITE FOR RESIDUE MG A 1001 A MG 1001 Software 4 BINDING SITE FOR RESIDUE MG A 1002 A MG 1002 Software 6 BINDING SITE FOR RESIDUE DG3 A 113 A DG3 113 Software 21 A DG3 113 F DG3 4 1_555 A ASP 610 C ASP 318 4 1_555 A TYR 611 C TYR 319 4 1_555 A ASP 785 C ASP 493 4 1_555 A DG3 113 F DG3 6 1_555 A ASP 610 C ASP 318 6 1_555 A ASP 785 C ASP 493 6 1_555 A GLU 786 C GLU 494 6 1_555 A HOH 3015 I HOH 6 1_555 A HOH 3023 I HOH 6 1_555 A ARG 573 C ARG 281 21 1_555 A ASP 610 C ASP 318 21 1_555 A TYR 611 C TYR 319 21 1_555 A SER 612 C SER 320 21 1_555 A GLN 613 C GLN 321 21 1_555 A ILE 614 C ILE 322 21 1_555 A GLU 615 C GLU 323 21 1_555 A HIS 639 C HIS 347 21 1_555 A ARG 659 C ARG 367 21 1_555 A ARG 660 C ARG 368 21 1_555 A LYS 663 C LYS 371 21 1_555 A PHE 667 C PHE 375 21 1_555 A TYR 671 C TYR 379 21 1_555 A ASP 785 C ASP 493 21 1_555 A MG 1001 D MG 21 1_555 A MG 1002 E MG 21 1_555 A HOH 3015 I HOH 21 1_555 A HOH 3019 I HOH 21 1_555 B DDG 112 A DDG 12 21 1_555 C DC 204 B DC 2 21 1_555 C DC 205 B DC 3 21 1_555 152 trigonal P 31 2 1