data_1R04 # _entry.id 1R04 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1R04 WWPDB D_1000175947 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 1990-01-15 _pdbx_database_PDB_obs_spr.pdb_id 2R04 _pdbx_database_PDB_obs_spr.replace_pdb_id 1R04 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.entry_id 1R04 _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.recvd_initial_deposition_date 1988-02-18 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Badger, J.' 1 'Smith, T.J.' 2 'Rossmann, M.G.' 3 # _citation.id primary _citation.title 'Structural Analysis of a Series of Antiviral Agents Complexed with Human Rhinovirus 14' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 85 _citation.page_first 3304 _citation.page_last ? _citation.year 1988 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Badger, J.' 1 primary 'Minor, I.' 2 primary 'Kremer, M.J.' 3 primary 'Oliveira, M.A.' 4 primary 'Smith, T.J.' 5 primary 'Griffith, J.P.' 6 primary 'Guerin, D.M.A.' 7 primary 'Krishnaswamy, S.' 8 primary 'Luo, M.' 9 primary 'Rossmann, M.G.' 10 primary 'Mckinlay, M.A.' 11 primary 'Diana, G.D.' 12 primary 'Dutko, F.J.' 13 primary 'Fancher, M.' 14 primary 'Rueckert, R.R.' 15 primary 'Heinz, B.A.' 16 # _cell.entry_id 1R04 _cell.length_a 445.100 _cell.length_b 445.100 _cell.length_c 445.100 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1R04 _symmetry.space_group_name_H-M 'P 21 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 # _entity.id 1 _entity.type non-polymer _entity.src_method syn _entity.pdbx_description '5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE' _entity.formula_weight 342.432 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _chem_comp.id W71 _chem_comp.type non-polymer _chem_comp.mon_nstd_flag . _chem_comp.name '5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE' _chem_comp.pdbx_synonyms 'COMPOUND IV' _chem_comp.formula 'C20 H26 N2 O3' _chem_comp.formula_weight 342.432 # _exptl.entry_id 1R04 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1R04 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 25 _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1R04 _struct.title 'STRUCTURAL ANALYSIS OF A SERIES OF ANTIVIRAL AGENTS COMPLEXED WITH HUMAN RHINOVIRUS 14' _struct.pdbx_descriptor 'RHINOVIRUS COAT PROTEIN, 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1R04 _struct_keywords.pdbx_keywords 'RHINOVIRUS COAT PROTEIN' _struct_keywords.text 'RHINOVIRUS COAT PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _database_PDB_matrix.entry_id 1R04 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1R04 _atom_sites.fract_transf_matrix[1][1] 0.002238 _atom_sites.fract_transf_matrix[1][2] -0.000134 _atom_sites.fract_transf_matrix[1][3] 0.000142 _atom_sites.fract_transf_matrix[2][1] 0.000142 _atom_sites.fract_transf_matrix[2][2] 0.002238 _atom_sites.fract_transf_matrix[2][3] -0.000134 _atom_sites.fract_transf_matrix[3][1] -0.000134 _atom_sites.fract_transf_matrix[3][2] 0.000142 _atom_sites.fract_transf_matrix[3][3] 0.002238 _atom_sites.fract_transf_vector[1] 0.00039 _atom_sites.fract_transf_vector[2] 0.00039 _atom_sites.fract_transf_vector[3] 0.00039 # loop_ _atom_type.symbol C N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 . W71 A 1 . ? 36.317 6.426 126.736 1.00 1.00 ? 1 W71 ? O1 1 HETATM 2 N N2 . W71 A 1 . ? 35.894 7.771 126.608 1.00 1.00 ? 1 W71 ? N2 1 HETATM 3 C C3 . W71 A 1 . ? 36.473 8.226 125.548 1.00 1.00 ? 1 W71 ? C3 1 HETATM 4 C C31 . W71 A 1 . ? 36.238 9.635 125.121 1.00 1.00 ? 1 W71 ? C31 1 HETATM 5 C C4 . W71 A 1 . ? 37.278 7.242 124.943 1.00 1.00 ? 1 W71 ? C4 1 HETATM 6 C C5 . W71 A 1 . ? 37.146 6.154 125.714 1.00 1.00 ? 1 W71 ? C5 1 HETATM 7 C C1C . W71 A 1 . ? 37.666 4.792 125.734 1.00 1.00 ? 1 W71 ? C1C 1 HETATM 8 C C2C . W71 A 1 . ? 38.476 4.470 124.521 1.00 1.00 ? 1 W71 ? C2C 1 HETATM 9 C C3C . W71 A 1 . ? 38.754 3.002 124.410 1.00 1.00 ? 1 W71 ? C3C 1 HETATM 10 C C4C . W71 A 1 . ? 39.935 2.671 123.585 1.00 1.00 ? 1 W71 ? C4C 1 HETATM 11 C C5C . W71 A 1 . ? 40.894 1.761 124.284 1.00 1.00 ? 1 W71 ? C5C 1 HETATM 12 C C6C . W71 A 1 . ? 40.974 0.407 123.663 1.00 1.00 ? 1 W71 ? C6C 1 HETATM 13 C C7C . W71 A 1 . ? 42.282 -0.246 123.920 1.00 1.00 ? 1 W71 ? C7C 1 HETATM 14 O O1B . W71 A 1 . ? 42.426 -1.257 122.947 1.00 1.00 ? 1 W71 ? O1B 1 HETATM 15 C C1B . W71 A 1 . ? 43.611 -1.899 122.794 1.00 1.00 ? 1 W71 ? C1B 1 HETATM 16 C C2B . W71 A 1 . ? 43.974 -2.574 121.639 1.00 1.00 ? 1 W71 ? C2B 1 HETATM 17 C C3B . W71 A 1 . ? 45.183 -3.219 121.589 1.00 1.00 ? 1 W71 ? C3B 1 HETATM 18 C C4B . W71 A 1 . ? 46.048 -3.194 122.676 1.00 1.00 ? 1 W71 ? C4B 1 HETATM 19 C C5B . W71 A 1 . ? 45.687 -2.488 123.834 1.00 1.00 ? 1 W71 ? C5B 1 HETATM 20 C C6B . W71 A 1 . ? 44.474 -1.845 123.890 1.00 1.00 ? 1 W71 ? C6B 1 HETATM 21 C C2A . W71 A 1 . ? 47.314 -3.925 122.601 1.00 1.00 ? 1 W71 ? C2A 1 HETATM 22 N N3A . W71 A 1 . ? 47.751 -4.637 121.437 1.00 1.00 ? 1 W71 ? N3A 1 HETATM 23 C C4A . W71 A 1 . ? 48.984 -5.192 121.590 1.00 1.00 ? 1 W71 ? C4A 1 HETATM 24 C C5A . W71 A 1 . ? 49.263 -4.734 123.010 1.00 1.00 ? 1 W71 ? C5A 1 HETATM 25 O O1A . W71 A 1 . ? 48.217 -3.993 123.522 1.00 1.00 ? 1 W71 ? O1A 1 # _pdbx_nonpoly_scheme.asym_id A _pdbx_nonpoly_scheme.entity_id 1 _pdbx_nonpoly_scheme.mon_id W71 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id W71 _pdbx_nonpoly_scheme.auth_mon_id W71 _pdbx_nonpoly_scheme.pdb_strand_id ? _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1988-10-09 2 'Structure model' 1 1 1990-01-15 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_entity_nonpoly.entity_id 1 _pdbx_entity_nonpoly.name '5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE' _pdbx_entity_nonpoly.comp_id W71 #