HEADER DNA 03-OCT-03 1R3Z TITLE CRYSTAL STRUCTURES OF D(GM5CGM5CGCGC) AND D(GCGCGM5CGM5C): EFFECTS OF TITLE 2 METHYLATION ON ALTERNATING DNA OCTAMERS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*(5CM)P*GP*(5CM)P*GP*CP*GP*C)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: DNA SYNTHESIZER KEYWDS DNA EXPDTA X-RAY DIFFRACTION AUTHOR K.SHI,B.PAN,D.TIPPIN,M.SUNDARALINGAM REVDAT 4 14-FEB-24 1R3Z 1 LINK REVDAT 3 11-OCT-17 1R3Z 1 REMARK REVDAT 2 24-FEB-09 1R3Z 1 VERSN REVDAT 1 23-DEC-03 1R3Z 0 JRNL AUTH K.SHI,B.PAN,D.TIPPIN,M.SUNDARALINGAM JRNL TITL STRUCTURES OF D(GM5)CGM5CGCGC) AND D(GCGCGM5CGM5C): EFFECTS JRNL TITL 2 OF METHYLATION ON ALTERNATING DNA OCTAMERS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 60 61 2004 JRNL REFN ISSN 0907-4449 JRNL PMID 14684893 JRNL DOI 10.1107/S0907444903021899 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 2311 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 229 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 163 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1R3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-03. REMARK 100 THE DEPOSITION ID IS D_1000020407. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2540 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 90.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR PLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CACODYLATE, MAGNESIUM CHLORIDE, REMARK 280 SPERMINE TETRACHLORIDE, PH 6.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.46500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.48500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.48500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.69750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.48500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.48500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 6.23250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.48500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.48500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.69750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.48500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.48500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 6.23250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 12.46500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 3 C6 DG A 3 O6 -0.055 REMARK 500 DG A 7 N3 DG A 7 C4 -0.058 REMARK 500 DG A 7 C8 DG A 7 N9 -0.051 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 5CM A 4 O3' - P - OP2 ANGL. DEV. = 9.5 DEGREES REMARK 500 DG A 7 O3' - P - OP2 ANGL. DEV. = 7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R41 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF D(GM5CGM5CGCGC) AND D(GCGCGM5CGM5C): EFFECTS REMARK 900 OF METHYLATION ON ALTERNATING DNA OCTAMERS DBREF 1R3Z A 1 8 PDB 1R3Z 1R3Z 1 8 SEQRES 1 A 8 DG 5CM DG 5CM DG DC DG DC MODRES 1R3Z 5CM A 2 DC MODRES 1R3Z 5CM A 4 DC HET 5CM A 2 20 HET 5CM A 4 20 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE FORMUL 1 5CM 2(C10 H16 N3 O7 P) FORMUL 2 HOH *25(H2 O) LINK O3' DG A 1 P 5CM A 2 1555 1555 1.63 LINK O3' 5CM A 2 P DG A 3 1555 1555 1.62 LINK O3' DG A 3 P 5CM A 4 1555 1555 1.61 LINK O3' 5CM A 4 P DG A 5 1555 1555 1.61 CRYST1 42.970 42.970 24.930 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023272 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.040112 0.00000 ATOM 1 O5' DG A 1 28.811 19.388 -5.346 1.00 28.84 O ATOM 2 C5' DG A 1 28.721 17.982 -5.073 1.00 28.56 C ATOM 3 C4' DG A 1 29.893 17.340 -4.353 1.00 26.97 C ATOM 4 O4' DG A 1 31.037 17.389 -5.224 1.00 25.23 O ATOM 5 C3' DG A 1 30.337 18.053 -3.115 1.00 27.46 C ATOM 6 O3' DG A 1 29.659 17.597 -1.968 1.00 30.48 O ATOM 7 C2' DG A 1 31.834 17.769 -3.063 1.00 26.97 C ATOM 8 C1' DG A 1 32.239 17.668 -4.489 1.00 24.67 C ATOM 9 N9 DG A 1 32.742 18.974 -4.922 1.00 24.65 N ATOM 10 C8 DG A 1 32.095 19.886 -5.723 1.00 22.69 C ATOM 11 N7 DG A 1 32.840 20.968 -5.981 1.00 23.51 N ATOM 12 C5 DG A 1 34.022 20.738 -5.272 1.00 22.92 C ATOM 13 C6 DG A 1 35.223 21.527 -5.180 1.00 22.22 C ATOM 14 O6 DG A 1 35.436 22.597 -5.715 1.00 23.81 O ATOM 15 N1 DG A 1 36.220 20.892 -4.406 1.00 23.46 N ATOM 16 C2 DG A 1 36.054 19.687 -3.808 1.00 23.61 C ATOM 17 N2 DG A 1 37.094 19.207 -3.074 1.00 24.45 N ATOM 18 N3 DG A 1 34.932 18.962 -3.885 1.00 24.65 N ATOM 19 C4 DG A 1 33.982 19.527 -4.620 1.00 23.32 C HETATM 20 N1 5CM A 2 34.076 20.857 -0.789 1.00 27.25 N HETATM 21 C2 5CM A 2 35.133 21.754 -1.081 1.00 27.08 C HETATM 22 N3 5CM A 2 34.896 22.784 -1.931 1.00 23.92 N HETATM 23 C4 5CM A 2 33.692 22.964 -2.459 1.00 23.79 C HETATM 24 C5 5CM A 2 32.610 22.064 -2.185 1.00 25.02 C HETATM 25 C5A 5CM A 2 31.275 22.301 -2.821 1.00 25.37 C HETATM 26 C6 5CM A 2 32.849 21.056 -1.341 1.00 25.67 C HETATM 27 O2 5CM A 2 36.255 21.539 -0.535 1.00 26.72 O HETATM 28 N4 5CM A 2 33.483 24.013 -3.251 1.00 23.75 N HETATM 29 C1' 5CM A 2 34.352 19.721 0.109 1.00 28.41 C HETATM 30 C2' 5CM A 2 34.160 20.139 1.557 1.00 29.46 C HETATM 31 C3' 5CM A 2 32.726 19.761 1.836 1.00 30.20 C HETATM 32 C4' 5CM A 2 32.627 18.450 1.072 1.00 29.61 C HETATM 33 O4' 5CM A 2 33.355 18.708 -0.153 1.00 29.07 O HETATM 34 O3' 5CM A 2 32.634 19.547 3.210 1.00 34.53 O HETATM 35 C5' 5CM A 2 31.237 18.027 0.719 1.00 29.98 C HETATM 36 O5' 5CM A 2 30.570 19.005 -0.020 1.00 29.99 O HETATM 37 P 5CM A 2 29.236 18.650 -0.803 1.00 31.35 P HETATM 38 OP1 5CM A 2 28.466 17.872 0.187 1.00 34.44 O HETATM 39 OP2 5CM A 2 28.696 19.898 -1.405 1.00 30.10 O ATOM 40 P DG A 3 32.080 20.753 4.136 1.00 37.16 P ATOM 41 OP1 DG A 3 31.820 20.065 5.428 1.00 38.26 O ATOM 42 OP2 DG A 3 31.024 21.527 3.473 1.00 36.93 O ATOM 43 O5' DG A 3 33.294 21.763 4.203 1.00 35.46 O ATOM 44 C5' DG A 3 34.317 21.544 5.098 1.00 35.36 C ATOM 45 C4' DG A 3 35.496 22.435 4.810 1.00 33.87 C ATOM 46 O4' DG A 3 35.649 22.445 3.390 1.00 32.82 O ATOM 47 C3' DG A 3 35.273 23.900 5.138 1.00 34.32 C ATOM 48 O3' DG A 3 35.627 24.194 6.478 1.00 35.47 O ATOM 49 C2' DG A 3 36.300 24.572 4.249 1.00 31.00 C ATOM 50 C1' DG A 3 36.326 23.676 3.006 1.00 30.77 C ATOM 51 N9 DG A 3 35.464 24.361 2.046 1.00 26.72 N ATOM 52 C8 DG A 3 34.204 24.025 1.678 1.00 25.11 C ATOM 53 N7 DG A 3 33.735 24.781 0.717 1.00 24.78 N ATOM 54 C5 DG A 3 34.741 25.677 0.463 1.00 22.49 C ATOM 55 C6 DG A 3 34.763 26.745 -0.431 1.00 21.31 C ATOM 56 O6 DG A 3 33.931 27.068 -1.206 1.00 22.13 O ATOM 57 N1 DG A 3 35.915 27.491 -0.309 1.00 19.60 N ATOM 58 C2 DG A 3 36.921 27.234 0.601 1.00 21.55 C ATOM 59 N2 DG A 3 37.956 28.093 0.609 1.00 21.17 N ATOM 60 N3 DG A 3 36.924 26.185 1.444 1.00 23.10 N ATOM 61 C4 DG A 3 35.800 25.469 1.310 1.00 25.53 C HETATM 62 N1 5CM A 4 35.777 29.126 3.483 1.00 24.09 N HETATM 63 C2 5CM A 4 35.508 30.002 2.451 1.00 21.62 C HETATM 64 N3 5CM A 4 34.362 29.852 1.696 1.00 21.64 N HETATM 65 C4 5CM A 4 33.503 28.887 1.999 1.00 20.13 C HETATM 66 C5 5CM A 4 33.757 27.979 3.074 1.00 24.07 C HETATM 67 C5A 5CM A 4 32.774 26.894 3.385 1.00 24.64 C HETATM 68 C6 5CM A 4 34.902 28.138 3.782 1.00 22.25 C HETATM 69 O2 5CM A 4 36.321 30.891 2.259 1.00 20.40 O HETATM 70 N4 5CM A 4 32.331 28.796 1.256 1.00 21.06 N HETATM 71 C1' 5CM A 4 37.056 29.317 4.215 1.00 26.59 C HETATM 72 C2' 5CM A 4 36.792 30.272 5.397 1.00 26.39 C HETATM 73 C3' 5CM A 4 36.595 29.350 6.577 1.00 28.12 C HETATM 74 C4' 5CM A 4 37.511 28.185 6.243 1.00 28.92 C HETATM 75 O4' 5CM A 4 37.433 28.063 4.797 1.00 26.91 O HETATM 76 O3' 5CM A 4 37.033 30.001 7.781 1.00 29.08 O HETATM 77 C5' 5CM A 4 37.023 26.917 6.893 1.00 30.16 C HETATM 78 O5' 5CM A 4 35.664 26.691 6.607 1.00 32.98 O HETATM 79 P 5CM A 4 34.935 25.440 7.234 1.00 35.63 P HETATM 80 OP1 5CM A 4 35.503 25.294 8.633 1.00 38.19 O HETATM 81 OP2 5CM A 4 33.467 25.687 7.081 1.00 34.99 O ATOM 82 P DG A 5 36.052 31.061 8.497 1.00 29.81 P ATOM 83 OP1 DG A 5 36.649 31.231 9.799 1.00 33.04 O ATOM 84 OP2 DG A 5 34.667 30.644 8.382 1.00 31.10 O ATOM 85 O5' DG A 5 36.340 32.320 7.625 1.00 27.53 O ATOM 86 C5' DG A 5 35.346 33.295 7.410 1.00 25.99 C ATOM 87 C4' DG A 5 35.849 34.219 6.350 1.00 24.03 C ATOM 88 O4' DG A 5 35.807 33.383 5.153 1.00 22.54 O ATOM 89 C3' DG A 5 34.834 35.311 6.068 1.00 22.95 C ATOM 90 O3' DG A 5 35.207 36.466 6.800 1.00 26.01 O ATOM 91 C2' DG A 5 34.979 35.529 4.561 1.00 22.51 C ATOM 92 C1' DG A 5 35.285 34.126 4.049 1.00 19.99 C ATOM 93 N9 DG A 5 34.044 33.489 3.640 1.00 18.30 N ATOM 94 C8 DG A 5 33.412 32.425 4.219 1.00 19.46 C ATOM 95 N7 DG A 5 32.389 31.991 3.540 1.00 19.19 N ATOM 96 C5 DG A 5 32.312 32.857 2.445 1.00 18.94 C ATOM 97 C6 DG A 5 31.369 32.937 1.365 1.00 19.91 C ATOM 98 O6 DG A 5 30.427 32.177 1.096 1.00 20.72 O ATOM 99 N1 DG A 5 31.615 34.034 0.547 1.00 18.23 N ATOM 100 C2 DG A 5 32.672 34.910 0.712 1.00 19.92 C ATOM 101 N2 DG A 5 32.829 35.904 -0.226 1.00 20.27 N ATOM 102 N3 DG A 5 33.548 34.829 1.708 1.00 20.71 N ATOM 103 C4 DG A 5 33.304 33.803 2.510 1.00 18.40 C ATOM 104 P DC A 6 34.045 37.399 7.381 1.00 27.52 P ATOM 105 OP1 DC A 6 34.803 38.320 8.280 1.00 31.62 O ATOM 106 OP2 DC A 6 32.892 36.600 7.845 1.00 27.13 O ATOM 107 O5' DC A 6 33.586 38.201 6.120 1.00 26.43 O ATOM 108 C5' DC A 6 34.424 39.091 5.507 1.00 26.90 C ATOM 109 C4' DC A 6 33.774 39.620 4.250 1.00 25.73 C ATOM 110 O4' DC A 6 33.600 38.518 3.298 1.00 24.77 O ATOM 111 C3' DC A 6 32.341 40.163 4.398 1.00 26.76 C ATOM 112 O3' DC A 6 32.270 41.550 4.776 1.00 31.80 O ATOM 113 C2' DC A 6 31.805 40.018 2.993 1.00 23.06 C ATOM 114 C1' DC A 6 32.425 38.726 2.504 1.00 23.17 C ATOM 115 N1 DC A 6 31.506 37.648 2.790 1.00 21.95 N ATOM 116 C2 DC A 6 30.492 37.361 1.926 1.00 20.80 C ATOM 117 O2 DC A 6 30.330 38.101 0.943 1.00 24.35 O ATOM 118 N3 DC A 6 29.651 36.282 2.140 1.00 19.62 N ATOM 119 C4 DC A 6 29.829 35.538 3.199 1.00 20.57 C ATOM 120 N4 DC A 6 29.037 34.452 3.327 1.00 19.66 N ATOM 121 C5 DC A 6 30.840 35.837 4.175 1.00 19.75 C ATOM 122 C6 DC A 6 31.668 36.897 3.927 1.00 21.58 C ATOM 123 P DG A 7 31.018 42.022 5.658 1.00 31.26 P ATOM 124 OP1 DG A 7 31.455 43.351 6.157 1.00 34.69 O ATOM 125 OP2 DG A 7 30.402 41.039 6.603 1.00 31.03 O ATOM 126 O5' DG A 7 29.858 42.158 4.550 1.00 29.08 O ATOM 127 C5' DG A 7 29.996 43.055 3.500 1.00 26.86 C ATOM 128 C4' DG A 7 28.834 42.907 2.542 1.00 25.03 C ATOM 129 O4' DG A 7 28.893 41.558 2.077 1.00 23.65 O ATOM 130 C3' DG A 7 27.427 43.037 3.133 1.00 26.28 C ATOM 131 O3' DG A 7 27.005 44.388 3.044 1.00 30.10 O ATOM 132 C2' DG A 7 26.583 42.163 2.196 1.00 24.57 C ATOM 133 C1' DG A 7 27.597 41.110 1.703 1.00 22.50 C ATOM 134 N9 DG A 7 27.333 39.925 2.475 1.00 19.04 N ATOM 135 C8 DG A 7 28.003 39.440 3.508 1.00 17.90 C ATOM 136 N7 DG A 7 27.512 38.297 3.968 1.00 16.99 N ATOM 137 C5 DG A 7 26.450 38.020 3.142 1.00 17.95 C ATOM 138 C6 DG A 7 25.601 36.907 3.112 1.00 20.10 C ATOM 139 O6 DG A 7 25.633 35.892 3.820 1.00 21.56 O ATOM 140 N1 DG A 7 24.655 37.013 2.154 1.00 21.61 N ATOM 141 C2 DG A 7 24.528 38.094 1.330 1.00 22.91 C ATOM 142 N2 DG A 7 23.515 38.063 0.482 1.00 24.88 N ATOM 143 N3 DG A 7 25.362 39.166 1.337 1.00 20.65 N ATOM 144 C4 DG A 7 26.273 39.034 2.244 1.00 19.38 C ATOM 145 P DC A 8 25.912 44.901 4.064 1.00 31.65 P ATOM 146 OP1 DC A 8 26.036 46.369 3.751 1.00 34.80 O ATOM 147 OP2 DC A 8 26.262 44.392 5.368 1.00 34.60 O ATOM 148 O5' DC A 8 24.535 44.291 3.643 1.00 32.29 O ATOM 149 C5' DC A 8 24.053 44.674 2.341 1.00 35.60 C ATOM 150 C4' DC A 8 22.719 44.063 1.995 1.00 35.48 C ATOM 151 O4' DC A 8 22.897 42.643 1.978 1.00 35.78 O ATOM 152 C3' DC A 8 21.576 44.373 2.961 1.00 37.50 C ATOM 153 O3' DC A 8 20.489 44.660 2.104 1.00 42.54 O ATOM 154 C2' DC A 8 21.400 43.088 3.732 1.00 37.11 C ATOM 155 C1' DC A 8 21.882 42.018 2.749 1.00 34.63 C ATOM 156 N1 DC A 8 22.510 40.915 3.523 1.00 29.53 N ATOM 157 C2 DC A 8 21.904 39.619 3.499 1.00 28.21 C ATOM 158 O2 DC A 8 20.919 39.427 2.763 1.00 27.49 O ATOM 159 N3 DC A 8 22.443 38.632 4.280 1.00 23.37 N ATOM 160 C4 DC A 8 23.523 38.908 5.042 1.00 22.89 C ATOM 161 N4 DC A 8 24.023 37.943 5.830 1.00 22.70 N ATOM 162 C5 DC A 8 24.172 40.199 5.033 1.00 23.82 C ATOM 163 C6 DC A 8 23.615 41.151 4.270 1.00 26.74 C TER 164 DC A 8 HETATM 165 O HOH A 101 24.270 41.190 -0.218 1.00 42.65 O HETATM 166 O HOH A 102 35.769 36.568 1.306 1.00 25.00 O HETATM 167 O HOH A 103 36.978 38.572 2.502 1.00 35.98 O HETATM 168 O HOH A 105 29.186 30.292 1.925 1.00 46.31 O HETATM 169 O HOH A 106 34.218 24.618 -7.038 1.00 39.14 O HETATM 170 O HOH A 107 31.690 23.013 -7.507 1.00 46.97 O HETATM 171 O HOH A 108 31.478 26.664 -2.008 1.00 45.13 O HETATM 172 O HOH A 109 31.041 24.716 0.016 1.00 40.00 O HETATM 173 O HOH A 110 26.809 34.937 5.927 1.00 42.66 O HETATM 174 O HOH A 111 26.243 38.542 7.593 1.00 32.46 O HETATM 175 O HOH A 112 29.990 22.288 0.968 1.00 53.55 O HETATM 176 O HOH A 113 38.073 38.434 5.031 1.00 39.14 O HETATM 177 O HOH A 114 27.625 20.783 -3.498 1.00 44.77 O HETATM 178 O HOH A 115 37.716 19.565 0.653 1.00 56.75 O HETATM 179 O HOH A 116 30.059 38.247 7.055 1.00 45.46 O HETATM 180 O HOH A 117 31.619 34.301 7.119 1.00 51.82 O HETATM 181 O HOH A 118 28.222 36.958 6.232 1.00 34.88 O HETATM 182 O HOH A 119 25.909 42.511 7.225 1.00 51.23 O HETATM 183 O HOH A 120 38.786 29.338 10.297 1.00 62.18 O HETATM 184 O HOH A 121 31.318 24.731 6.406 1.00 54.80 O HETATM 185 O HOH A 122 28.712 19.802 -7.930 1.00 51.79 O HETATM 186 O HOH A 123 32.980 28.434 6.772 1.00 51.60 O HETATM 187 O HOH A 124 37.147 22.714 9.335 1.00 64.07 O HETATM 188 O HOH A 125 29.902 26.813 1.047 1.00 46.44 O HETATM 189 O HOH A 126 39.436 39.549 1.212 1.00 61.31 O CONECT 6 37 CONECT 20 21 26 29 CONECT 21 20 22 27 CONECT 22 21 23 CONECT 23 22 24 28 CONECT 24 23 25 26 CONECT 25 24 CONECT 26 20 24 CONECT 27 21 CONECT 28 23 CONECT 29 20 30 33 CONECT 30 29 31 CONECT 31 30 32 34 CONECT 32 31 33 35 CONECT 33 29 32 CONECT 34 31 40 CONECT 35 32 36 CONECT 36 35 37 CONECT 37 6 36 38 39 CONECT 38 37 CONECT 39 37 CONECT 40 34 CONECT 48 79 CONECT 62 63 68 71 CONECT 63 62 64 69 CONECT 64 63 65 CONECT 65 64 66 70 CONECT 66 65 67 68 CONECT 67 66 CONECT 68 62 66 CONECT 69 63 CONECT 70 65 CONECT 71 62 72 75 CONECT 72 71 73 CONECT 73 72 74 76 CONECT 74 73 75 77 CONECT 75 71 74 CONECT 76 73 82 CONECT 77 74 78 CONECT 78 77 79 CONECT 79 48 78 80 81 CONECT 80 79 CONECT 81 79 CONECT 82 76 MASTER 274 0 2 0 0 0 0 6 188 1 44 1 END