1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Penin, F.
Brass, V.
Appel, N.
Ramboarina, S.
Montserret, R.
Ficheux, D.
Blum, H.E.
Bartenschlager, R.
Moradpour, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
279
40835
40843
10.1074/jbc.M404761200
15247283
Structure and function of the membrane anchor domain of hepatitis C virus nonstructural protein 5A.
2004
10.2210/pdb1r7f/pdb
pdb_00001r7f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
3770.423
Genome polyprotein
Nonstructural protein NS5A (P56)(residues 1973-2003 of Swiss-Prot sequence P27958)
1
syn
polymer
no
no
SGSWLRDIWDWICEVLSDFKTWLKAKLMPQL
SGSWLRDIWDWICEVLSDFKTWLKAKLMPQL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2004-08-10
1
1
2008-04-29
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus.
(Minimized average structure, Sample in 50% tfe)
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus.
(Ensemble of 51 structures, sample in 50% tfe)
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus.
(Minimized average structure, Sample in 100mM SDS.)
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus.
(Minimized average structure, Sample in 100mM DPC)
RCSB
Y
RCSB
2003-10-21
REL
REL
The peptide was chemically synthesized. The sequence is naturally found in hepatitis C virus.
sample
structures with the least restraint violations
100
43
2D NOESY
2D TOCSY
DQF-COSY
1H-13C HSQC
6.0
ambient
313
K
distance geometry, simulated annealing, molecular dynamics, energy minimization
1.2mM NS5A[1-31], 10mM DTTd10
100mM SDS in H2O/D2O 95/5 (v/v)
Varian
collection
VNMR
6.1
Varian
processing
VNMR
6.1
Varian
data analysis
VNMR
6.1
Brunger
structure solution
X-PLOR
3.85
Brunger
refinement
X-PLOR
3.85
500
Varian
UNITYPLUS
SER
1
n
1
SER
1
A
GLY
2
n
2
GLY
2
A
SER
3
n
3
SER
3
A
TRP
4
n
4
TRP
4
A
LEU
5
n
5
LEU
5
A
ARG
6
n
6
ARG
6
A
ASP
7
n
7
ASP
7
A
ILE
8
n
8
ILE
8
A
TRP
9
n
9
TRP
9
A
ASP
10
n
10
ASP
10
A
TRP
11
n
11
TRP
11
A
ILE
12
n
12
ILE
12
A
CYS
13
n
13
CYS
13
A
GLU
14
n
14
GLU
14
A
VAL
15
n
15
VAL
15
A
LEU
16
n
16
LEU
16
A
SER
17
n
17
SER
17
A
ASP
18
n
18
ASP
18
A
PHE
19
n
19
PHE
19
A
LYS
20
n
20
LYS
20
A
THR
21
n
21
THR
21
A
TRP
22
n
22
TRP
22
A
LEU
23
n
23
LEU
23
A
LYS
24
n
24
LYS
24
A
ALA
25
n
25
ALA
25
A
LYS
26
n
26
LYS
26
A
LEU
27
n
27
LEU
27
A
MET
28
n
28
MET
28
A
PRO
29
n
29
PRO
29
A
GLN
30
n
30
GLN
30
A
LEU
31
n
31
LEU
31
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ARG
6
0.231
SIDE CHAIN
2
A
ARG
6
0.312
SIDE CHAIN
3
A
ARG
6
0.304
SIDE CHAIN
4
A
ARG
6
0.286
SIDE CHAIN
5
A
ARG
6
0.304
SIDE CHAIN
6
A
ARG
6
0.313
SIDE CHAIN
7
A
ARG
6
0.275
SIDE CHAIN
8
A
ARG
6
0.288
SIDE CHAIN
9
A
ARG
6
0.311
SIDE CHAIN
10
A
ARG
6
0.301
SIDE CHAIN
11
A
ARG
6
0.317
SIDE CHAIN
12
A
ARG
6
0.318
SIDE CHAIN
13
A
ARG
6
0.318
SIDE CHAIN
14
A
ARG
6
0.317
SIDE CHAIN
15
A
ARG
6
0.306
SIDE CHAIN
16
A
ARG
6
0.306
SIDE CHAIN
17
A
ARG
6
0.314
SIDE CHAIN
18
A
ARG
6
0.296
SIDE CHAIN
19
A
ARG
6
0.318
SIDE CHAIN
20
A
ARG
6
0.308
SIDE CHAIN
21
A
ARG
6
0.311
SIDE CHAIN
22
A
ARG
6
0.316
SIDE CHAIN
23
A
ARG
6
0.317
SIDE CHAIN
24
A
ARG
6
0.308
SIDE CHAIN
25
A
ARG
6
0.318
SIDE CHAIN
26
A
ARG
6
0.315
SIDE CHAIN
27
A
ARG
6
0.317
SIDE CHAIN
28
A
ARG
6
0.299
SIDE CHAIN
29
A
ARG
6
0.316
SIDE CHAIN
30
A
ARG
6
0.313
SIDE CHAIN
31
A
ARG
6
0.317
SIDE CHAIN
32
A
ARG
6
0.316
SIDE CHAIN
33
A
ARG
6
0.318
SIDE CHAIN
34
A
ARG
6
0.303
SIDE CHAIN
35
A
ARG
6
0.299
SIDE CHAIN
36
A
ARG
6
0.289
SIDE CHAIN
37
A
ARG
6
0.271
SIDE CHAIN
38
A
ARG
6
0.317
SIDE CHAIN
39
A
ARG
6
0.310
SIDE CHAIN
40
A
ARG
6
0.316
SIDE CHAIN
41
A
ARG
6
0.316
SIDE CHAIN
42
A
ARG
6
0.313
SIDE CHAIN
43
A
ARG
6
0.304
SIDE CHAIN
1
A
TRP
4
-169.01
-158.54
2
A
SER
3
-75.55
-81.85
4
A
TRP
4
60.86
-177.71
4
A
LEU
5
64.09
-72.70
5
A
LEU
5
33.95
38.52
5
A
GLN
30
35.14
57.43
6
A
SER
3
-125.30
-71.79
6
A
TRP
4
-158.96
-158.77
6
A
MET
28
58.04
87.98
7
A
SER
3
-168.18
-50.45
7
A
TRP
4
-77.67
-134.31
7
A
GLN
30
51.80
76.04
8
A
GLN
30
51.78
74.35
9
A
SER
3
-99.78
30.11
9
A
LEU
27
67.10
96.65
9
A
MET
28
69.26
147.56
10
A
SER
3
-115.43
53.07
10
A
LEU
5
66.29
-62.26
10
A
MET
28
53.56
84.62
10
A
GLN
30
33.14
57.60
11
A
SER
3
-131.40
-56.66
11
A
TRP
4
-165.46
-142.62
11
A
MET
28
55.64
74.41
11
A
GLN
30
65.36
158.33
12
A
SER
3
-132.90
-55.89
12
A
TRP
4
30.56
63.37
12
A
LEU
27
64.00
99.93
12
A
MET
28
-119.20
75.49
13
A
LEU
27
-123.42
-61.97
13
A
MET
28
-162.46
64.61
14
A
SER
3
-115.97
-81.78
14
A
TRP
4
64.37
-68.59
14
A
LEU
27
68.14
109.01
14
A
GLN
30
-157.16
36.92
15
A
TRP
4
-128.29
-166.35
16
A
SER
3
-121.70
-70.87
16
A
TRP
4
-156.59
-143.10
17
A
LEU
27
64.84
115.32
18
A
LEU
5
65.95
-66.80
18
A
LEU
27
-80.35
-82.00
18
A
MET
28
-171.86
113.25
19
A
SER
3
-117.59
54.12
19
A
TRP
4
-89.04
-142.45
20
A
SER
3
-147.70
-50.57
20
A
TRP
4
-75.13
-145.41
20
A
LEU
27
57.19
72.50
21
A
SER
3
-130.66
-71.98
22
A
TRP
4
-90.24
-139.85
22
A
PRO
29
-74.92
-167.36
23
A
TRP
4
66.99
142.68
23
A
LEU
5
-160.99
34.52
23
A
MET
28
51.77
72.16
25
A
SER
3
-152.25
-54.71
26
A
LEU
27
67.48
113.22
26
A
MET
28
67.89
120.24
26
A
PRO
29
-71.28
-168.46
27
A
SER
3
-161.39
-76.63
27
A
TRP
4
-160.05
-150.44
27
A
LEU
27
-95.29
-144.11
27
A
MET
28
-173.21
-58.70
27
A
GLN
30
-162.16
58.52
28
A
MET
28
-91.93
-67.65
30
A
SER
3
-151.93
-60.74
30
A
TRP
4
-109.67
-158.66
30
A
LEU
5
68.07
-62.60
31
A
LEU
27
70.48
118.38
32
A
SER
3
-132.01
-49.17
32
A
TRP
4
-154.07
-159.01
32
A
LEU
5
71.05
-58.39
32
A
MET
28
-165.31
-60.83
32
A
GLN
30
-159.66
49.28
33
A
TRP
4
-157.01
-157.13
33
A
LEU
5
74.63
-43.10
33
A
MET
28
53.32
77.38
33
A
GLN
30
-159.75
35.38
34
A
SER
3
-133.56
-69.77
34
A
TRP
4
-163.60
-146.48
34
A
GLN
30
31.02
61.38
35
A
SER
3
-127.86
-62.86
35
A
LEU
27
61.12
80.97
36
A
SER
3
-132.12
-71.41
36
A
TRP
4
-145.14
-149.86
36
A
LEU
27
-85.76
-145.03
36
A
MET
28
60.70
99.03
36
A
GLN
30
-163.38
46.47
37
A
SER
3
-123.52
-61.20
37
A
MET
28
65.10
163.77
38
A
PRO
29
-75.74
-143.67
38
A
GLN
30
-72.61
-158.47
39
A
MET
28
56.05
75.01
40
A
TRP
4
-123.11
-164.67
40
A
LEU
27
64.99
100.85
41
A
SER
3
-162.97
-54.68
41
A
TRP
4
-140.63
-145.58
41
A
MET
28
57.19
88.38
42
A
TRP
4
65.04
151.54
42
A
LEU
5
67.66
-60.28
43
A
TRP
4
-88.73
-137.13
43
A
MET
28
26.46
74.20
43
A
GLN
30
-157.65
36.24
NMR structure of the membrane anchor domain (1-31) of the nonstructural protein 5A (NS5A) of hepatitis C virus (Ensemble of 43 structures. Sample in 100mM SDS)
1
N
N
A
ASP
7
A
ASP
7
HELX_P
A
GLU
14
A
GLU
14
1
1
8
A
VAL
15
A
VAL
15
HELX_P
A
MET
28
A
MET
28
1
2
14
MEMBRANE PROTEIN
Membrane anchor domain, HCV NS5A protein, peptide., MEMBRANE PROTEIN
POLG_HCVH
UNP
1
1973
P27958
SGSWLRDIWDWICEVLSDFKTWLKAKLMPQL
1973
2003
1R7F
1
31
P27958
A
1
1
31