0.007838
0.004525
0.000000
0.000000
0.009050
0.000000
0.000000
0.000000
0.008852
0.00000
0.00000
0.00000
Thompson, A.A.
Peersen, O.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
127.590
127.590
112.971
C2 H4 O2
60.052
ACETIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H12 As N O2 S
225.141
n
S-(DIMETHYLARSENIC)CYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
H
N
9
N
N
N
10
S
C
N
11
N
C
N
12
N
O
N
13
N
C
N
14
N
O
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
N
N
23
S
C
N
24
N
C
N
25
N
O
N
26
N
C
N
27
N
C
N
28
N
C
N
29
N
N
N
30
N
C
N
31
N
N
N
32
N
N
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
N
N
50
S
C
N
51
N
C
N
52
N
O
N
53
N
C
N
54
N
C
N
55
N
O
N
56
N
N
N
57
N
O
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
C
N
72
N
O
N
73
N
O
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
R
C
N
84
N
C
N
85
N
C
N
86
N
O
N
87
N
O
N
88
N
S
N
89
N
AS
N
90
N
C
N
91
N
C
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
R
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
S
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
N
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
N
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
Y
172
N
C
Y
173
N
N
Y
174
N
C
Y
175
N
C
Y
176
N
N
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
S
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
N
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
S
N
267
N
C
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
R
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
N
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
N
407
N
C
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
Y
168
N
sing
Y
169
N
doub
Y
170
N
doub
N
171
N
sing
Y
172
N
sing
N
173
N
sing
Y
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
Y
276
N
doub
Y
277
N
sing
Y
278
N
sing
N
279
N
sing
Y
280
N
doub
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
23
3462
3471
10.1038/sj.emboj.7600357
15306852
Structural basis for proteolysis-dependent activation of the poliovirus RNA-dependent RNA polymerase.
2004
10.2210/pdb1ra6/pdb
pdb_00001ra6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Pt-coated toroidal Si mirror for horizontal and vertical focussing
CCD
2003-04-09
ADSC QUANTUM 315
double flat Si crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
1.1
1.0
X25
NSLS
1.1
SYNCHROTRON
NSLS BEAMLINE X25
52987.859
Genome polyprotein
2.7.7.48
RNA-directed RNA polymerase (residue 1748-2208)
L446D, R455D
1
man
polymer
60.052
ACETIC ACID
8
syn
non-polymer
18.015
water
297
nat
water
P3D
no
yes
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH
YAGQLMSLDINTEQM(CAS)LEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVT
YVKDELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVG(CAS)DPDLFWSKIPVLMEEKLFAF
DYTGYDASLSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTY(CAS)VKGGMPSG(CAS)SGTSIFNSMINNLI
IRTLLLKTYKGIDLDHLKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKY
PFLIHPVMPMKEIHESIRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEYSTLYDRWLDSF
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH
YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD
ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS
LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDH
LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES
IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEYSTLYDRWLDSF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
n
n
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n
n
n
n
n
n
n
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n
n
n
n
n
n
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n
n
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n
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n
n
n
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n
n
n
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n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Enterovirus
Poliovirus
Mahoney
Escherichia
sample
3D
12081
Human poliovirus 1
562
Escherichia coli
BL21 (DE3) PLYSS
PLASMID
pKKT7E
1
VAPOR DIFFUSION, HANGING DROP
7.0
sodium acetate, cacodylate, DTT, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K
289
database_2
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Source and taxonomy
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2004-08-17
1
1
2008-04-29
1
2
2011-07-13
1
3
2021-10-27
1
4
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Partial Structure of Poliovirus Polymerase
RCSB
Y
RCSB
2003-10-31
REL
REL
ACY
ACETIC ACID
HOH
water
1RDR
PDB ENTRY 1RDR
PDB
experimental model
ACY
901
2
ACY
ACY
901
A
ACY
902
2
ACY
ACY
902
A
ACY
903
2
ACY
ACY
903
A
ACY
904
2
ACY
ACY
904
A
ACY
905
2
ACY
ACY
905
A
ACY
906
2
ACY
ACY
906
A
ACY
907
2
ACY
ACY
907
A
ACY
908
2
ACY
ACY
908
A
HOH
501
3
HOH
HOH
501
A
HOH
502
3
HOH
HOH
502
A
HOH
503
3
HOH
HOH
503
A
HOH
504
3
HOH
HOH
504
A
HOH
505
3
HOH
HOH
505
A
HOH
506
3
HOH
HOH
506
A
HOH
507
3
HOH
HOH
507
A
HOH
508
3
HOH
HOH
508
A
HOH
509
3
HOH
HOH
509
A
HOH
510
3
HOH
HOH
510
A
HOH
511
3
HOH
HOH
511
A
HOH
512
3
HOH
HOH
512
A
HOH
513
3
HOH
HOH
513
A
HOH
514
3
HOH
HOH
514
A
HOH
515
3
HOH
HOH
515
A
HOH
516
3
HOH
HOH
516
A
HOH
517
3
HOH
HOH
517
A
HOH
518
3
HOH
HOH
518
A
HOH
519
3
HOH
HOH
519
A
HOH
520
3
HOH
HOH
520
A
HOH
521
3
HOH
HOH
521
A
HOH
522
3
HOH
HOH
522
A
HOH
523
3
HOH
HOH
523
A
HOH
524
3
HOH
HOH
524
A
HOH
525
3
HOH
HOH
525
A
HOH
526
3
HOH
HOH
526
A
HOH
527
3
HOH
HOH
527
A
HOH
528
3
HOH
HOH
528
A
HOH
529
3
HOH
HOH
529
A
HOH
530
3
HOH
HOH
530
A
HOH
531
3
HOH
HOH
531
A
HOH
532
3
HOH
HOH
532
A
HOH
533
3
HOH
HOH
533
A
HOH
534
3
HOH
HOH
534
A
HOH
535
3
HOH
HOH
535
A
HOH
536
3
HOH
HOH
536
A
HOH
538
3
HOH
HOH
538
A
HOH
539
3
HOH
HOH
539
A
HOH
540
3
HOH
HOH
540
A
HOH
541
3
HOH
HOH
541
A
HOH
542
3
HOH
HOH
542
A
HOH
543
3
HOH
HOH
543
A
HOH
544
3
HOH
HOH
544
A
HOH
545
3
HOH
HOH
545
A
HOH
546
3
HOH
HOH
546
A
HOH
547
3
HOH
HOH
547
A
HOH
548
3
HOH
HOH
548
A
HOH
549
3
HOH
HOH
549
A
HOH
550
3
HOH
HOH
550
A
HOH
551
3
HOH
HOH
551
A
HOH
552
3
HOH
HOH
552
A
HOH
553
3
HOH
HOH
553
A
HOH
554
3
HOH
HOH
554
A
HOH
555
3
HOH
HOH
555
A
HOH
556
3
HOH
HOH
556
A
HOH
557
3
HOH
HOH
557
A
HOH
558
3
HOH
HOH
558
A
HOH
559
3
HOH
HOH
559
A
HOH
560
3
HOH
HOH
560
A
HOH
561
3
HOH
HOH
561
A
HOH
562
3
HOH
HOH
562
A
HOH
563
3
HOH
HOH
563
A
HOH
564
3
HOH
HOH
564
A
HOH
565
3
HOH
HOH
565
A
HOH
566
3
HOH
HOH
566
A
HOH
567
3
HOH
HOH
567
A
HOH
568
3
HOH
HOH
568
A
HOH
569
3
HOH
HOH
569
A
HOH
570
3
HOH
HOH
570
A
HOH
571
3
HOH
HOH
571
A
HOH
572
3
HOH
HOH
572
A
HOH
573
3
HOH
HOH
573
A
HOH
574
3
HOH
HOH
574
A
HOH
575
3
HOH
HOH
575
A
HOH
576
3
HOH
HOH
576
A
HOH
577
3
HOH
HOH
577
A
HOH
578
3
HOH
HOH
578
A
HOH
579
3
HOH
HOH
579
A
HOH
580
3
HOH
HOH
580
A
HOH
581
3
HOH
HOH
581
A
HOH
582
3
HOH
HOH
582
A
HOH
583
3
HOH
HOH
583
A
HOH
584
3
HOH
HOH
584
A
HOH
585
3
HOH
HOH
585
A
HOH
587
3
HOH
HOH
587
A
HOH
589
3
HOH
HOH
589
A
HOH
590
3
HOH
HOH
590
A
HOH
591
3
HOH
HOH
591
A
HOH
592
3
HOH
HOH
592
A
HOH
593
3
HOH
HOH
593
A
HOH
594
3
HOH
HOH
594
A
HOH
595
3
HOH
HOH
595
A
HOH
596
3
HOH
HOH
596
A
HOH
597
3
HOH
HOH
597
A
HOH
598
3
HOH
HOH
598
A
HOH
599
3
HOH
HOH
599
A
HOH
600
3
HOH
HOH
600
A
HOH
601
3
HOH
HOH
601
A
HOH
602
3
HOH
HOH
602
A
HOH
603
3
HOH
HOH
603
A
HOH
604
3
HOH
HOH
604
A
HOH
605
3
HOH
HOH
605
A
HOH
606
3
HOH
HOH
606
A
HOH
607
3
HOH
HOH
607
A
HOH
608
3
HOH
HOH
608
A
HOH
609
3
HOH
HOH
609
A
HOH
610
3
HOH
HOH
610
A
HOH
611
3
HOH
HOH
611
A
HOH
612
3
HOH
HOH
612
A
HOH
613
3
HOH
HOH
613
A
HOH
614
3
HOH
HOH
614
A
HOH
615
3
HOH
HOH
615
A
HOH
616
3
HOH
HOH
616
A
HOH
617
3
HOH
HOH
617
A
HOH
618
3
HOH
HOH
618
A
HOH
619
3
HOH
HOH
619
A
HOH
620
3
HOH
HOH
620
A
HOH
621
3
HOH
HOH
621
A
HOH
622
3
HOH
HOH
622
A
HOH
623
3
HOH
HOH
623
A
HOH
624
3
HOH
HOH
624
A
HOH
625
3
HOH
HOH
625
A
HOH
626
3
HOH
HOH
626
A
HOH
627
3
HOH
HOH
627
A
HOH
628
3
HOH
HOH
628
A
HOH
629
3
HOH
HOH
629
A
HOH
630
3
HOH
HOH
630
A
HOH
631
3
HOH
HOH
631
A
HOH
632
3
HOH
HOH
632
A
HOH
633
3
HOH
HOH
633
A
HOH
634
3
HOH
HOH
634
A
HOH
635
3
HOH
HOH
635
A
HOH
636
3
HOH
HOH
636
A
HOH
637
3
HOH
HOH
637
A
HOH
638
3
HOH
HOH
638
A
HOH
639
3
HOH
HOH
639
A
HOH
640
3
HOH
HOH
640
A
HOH
641
3
HOH
HOH
641
A
HOH
642
3
HOH
HOH
642
A
HOH
643
3
HOH
HOH
643
A
HOH
644
3
HOH
HOH
644
A
HOH
645
3
HOH
HOH
645
A
HOH
646
3
HOH
HOH
646
A
HOH
647
3
HOH
HOH
647
A
HOH
648
3
HOH
HOH
648
A
HOH
649
3
HOH
HOH
649
A
HOH
650
3
HOH
HOH
650
A
HOH
651
3
HOH
HOH
651
A
HOH
652
3
HOH
HOH
652
A
HOH
653
3
HOH
HOH
653
A
HOH
654
3
HOH
HOH
654
A
HOH
655
3
HOH
HOH
655
A
HOH
656
3
HOH
HOH
656
A
HOH
657
3
HOH
HOH
657
A
HOH
658
3
HOH
HOH
658
A
HOH
659
3
HOH
HOH
659
A
HOH
660
3
HOH
HOH
660
A
HOH
661
3
HOH
HOH
661
A
HOH
662
3
HOH
HOH
662
A
HOH
663
3
HOH
HOH
663
A
HOH
664
3
HOH
HOH
664
A
HOH
665
3
HOH
HOH
665
A
HOH
666
3
HOH
HOH
666
A
HOH
667
3
HOH
HOH
667
A
HOH
668
3
HOH
HOH
668
A
HOH
669
3
HOH
HOH
669
A
HOH
670
3
HOH
HOH
670
A
HOH
671
3
HOH
HOH
671
A
HOH
672
3
HOH
HOH
672
A
HOH
673
3
HOH
HOH
673
A
HOH
674
3
HOH
HOH
674
A
HOH
675
3
HOH
HOH
675
A
HOH
676
3
HOH
HOH
676
A
HOH
677
3
HOH
HOH
677
A
HOH
678
3
HOH
HOH
678
A
HOH
679
3
HOH
HOH
679
A
HOH
680
3
HOH
HOH
680
A
HOH
681
3
HOH
HOH
681
A
HOH
682
3
HOH
HOH
682
A
HOH
683
3
HOH
HOH
683
A
HOH
684
3
HOH
HOH
684
A
HOH
685
3
HOH
HOH
685
A
HOH
686
3
HOH
HOH
686
A
HOH
687
3
HOH
HOH
687
A
HOH
688
3
HOH
HOH
688
A
HOH
689
3
HOH
HOH
689
A
HOH
690
3
HOH
HOH
690
A
HOH
691
3
HOH
HOH
691
A
HOH
692
3
HOH
HOH
692
A
HOH
693
3
HOH
HOH
693
A
HOH
694
3
HOH
HOH
694
A
HOH
695
3
HOH
HOH
695
A
HOH
696
3
HOH
HOH
696
A
HOH
697
3
HOH
HOH
697
A
HOH
698
3
HOH
HOH
698
A
HOH
699
3
HOH
HOH
699
A
HOH
700
3
HOH
HOH
700
A
HOH
701
3
HOH
HOH
701
A
HOH
702
3
HOH
HOH
702
A
HOH
703
3
HOH
HOH
703
A
HOH
704
3
HOH
HOH
704
A
HOH
705
3
HOH
HOH
705
A
HOH
706
3
HOH
HOH
706
A
HOH
707
3
HOH
HOH
707
A
HOH
708
3
HOH
HOH
708
A
HOH
709
3
HOH
HOH
709
A
HOH
710
3
HOH
HOH
710
A
HOH
711
3
HOH
HOH
711
A
HOH
712
3
HOH
HOH
712
A
HOH
713
3
HOH
HOH
713
A
HOH
714
3
HOH
HOH
714
A
HOH
715
3
HOH
HOH
715
A
HOH
716
3
HOH
HOH
716
A
HOH
717
3
HOH
HOH
717
A
HOH
718
3
HOH
HOH
718
A
HOH
719
3
HOH
HOH
719
A
HOH
720
3
HOH
HOH
720
A
HOH
721
3
HOH
HOH
721
A
HOH
722
3
HOH
HOH
722
A
HOH
723
3
HOH
HOH
723
A
HOH
724
3
HOH
HOH
724
A
HOH
725
3
HOH
HOH
725
A
HOH
726
3
HOH
HOH
726
A
HOH
727
3
HOH
HOH
727
A
HOH
728
3
HOH
HOH
728
A
HOH
729
3
HOH
HOH
729
A
HOH
730
3
HOH
HOH
730
A
HOH
731
3
HOH
HOH
731
A
HOH
732
3
HOH
HOH
732
A
HOH
733
3
HOH
HOH
733
A
HOH
734
3
HOH
HOH
734
A
HOH
735
3
HOH
HOH
735
A
HOH
736
3
HOH
HOH
736
A
HOH
737
3
HOH
HOH
737
A
HOH
738
3
HOH
HOH
738
A
HOH
739
3
HOH
HOH
739
A
HOH
740
3
HOH
HOH
740
A
HOH
741
3
HOH
HOH
741
A
HOH
742
3
HOH
HOH
742
A
HOH
743
3
HOH
HOH
743
A
HOH
744
3
HOH
HOH
744
A
HOH
745
3
HOH
HOH
745
A
HOH
746
3
HOH
HOH
746
A
HOH
747
3
HOH
HOH
747
A
HOH
748
3
HOH
HOH
748
A
HOH
749
3
HOH
HOH
749
A
HOH
750
3
HOH
HOH
750
A
HOH
751
3
HOH
HOH
751
A
HOH
752
3
HOH
HOH
752
A
HOH
753
3
HOH
HOH
753
A
HOH
754
3
HOH
HOH
754
A
HOH
755
3
HOH
HOH
755
A
HOH
756
3
HOH
HOH
756
A
HOH
757
3
HOH
HOH
757
A
HOH
758
3
HOH
HOH
758
A
HOH
759
3
HOH
HOH
759
A
HOH
760
3
HOH
HOH
760
A
HOH
761
3
HOH
HOH
761
A
HOH
762
3
HOH
HOH
762
A
HOH
763
3
HOH
HOH
763
A
HOH
764
3
HOH
HOH
764
A
HOH
765
3
HOH
HOH
765
A
HOH
766
3
HOH
HOH
766
A
HOH
767
3
HOH
HOH
767
A
HOH
768
3
HOH
HOH
768
A
HOH
769
3
HOH
HOH
769
A
HOH
770
3
HOH
HOH
770
A
HOH
771
3
HOH
HOH
771
A
HOH
772
3
HOH
HOH
772
A
HOH
773
3
HOH
HOH
773
A
HOH
774
3
HOH
HOH
774
A
HOH
775
3
HOH
HOH
775
A
HOH
776
3
HOH
HOH
776
A
HOH
777
3
HOH
HOH
777
A
HOH
778
3
HOH
HOH
778
A
HOH
779
3
HOH
HOH
779
A
HOH
780
3
HOH
HOH
780
A
HOH
781
3
HOH
HOH
781
A
HOH
782
3
HOH
HOH
782
A
HOH
783
3
HOH
HOH
783
A
HOH
784
3
HOH
HOH
784
A
HOH
785
3
HOH
HOH
785
A
HOH
786
3
HOH
HOH
786
A
HOH
787
3
HOH
HOH
787
A
HOH
788
3
HOH
HOH
788
A
HOH
789
3
HOH
HOH
789
A
HOH
790
3
HOH
HOH
790
A
HOH
791
3
HOH
HOH
791
A
HOH
792
3
HOH
HOH
792
A
HOH
793
3
HOH
HOH
793
A
HOH
794
3
HOH
HOH
794
A
HOH
795
3
HOH
HOH
795
A
HOH
796
3
HOH
HOH
796
A
HOH
797
3
HOH
HOH
797
A
HOH
798
3
HOH
HOH
798
A
HOH
799
3
HOH
HOH
799
A
HOH
800
3
HOH
HOH
800
A
GLY
1
n
1
GLY
1
A
GLU
2
n
2
GLU
2
A
ILE
3
n
3
ILE
3
A
GLN
4
n
4
GLN
4
A
TRP
5
n
5
TRP
5
A
MET
6
n
6
MET
6
A
ARG
7
n
7
ARG
7
A
PRO
8
n
8
PRO
8
A
SER
9
n
9
SER
9
A
LYS
10
n
10
LYS
10
A
GLU
11
n
11
GLU
11
A
VAL
12
n
12
VAL
12
A
GLY
13
n
13
GLY
13
A
TYR
14
n
14
TYR
14
A
PRO
15
n
15
PRO
15
A
ILE
16
n
16
ILE
16
A
ILE
17
n
17
ILE
17
A
ASN
18
n
18
ASN
18
A
ALA
19
n
19
ALA
19
A
PRO
20
n
20
PRO
20
A
SER
21
n
21
SER
21
A
LYS
22
n
22
LYS
22
A
THR
23
n
23
THR
23
A
LYS
24
n
24
LYS
24
A
LEU
25
n
25
LEU
25
A
GLU
26
n
26
GLU
26
A
PRO
27
n
27
PRO
27
A
SER
28
n
28
SER
28
A
ALA
29
n
29
ALA
29
A
PHE
30
n
30
PHE
30
A
HIS
31
n
31
HIS
31
A
TYR
32
n
32
TYR
32
A
VAL
33
n
33
VAL
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
GLY
36
n
36
GLY
36
A
VAL
37
n
37
VAL
37
A
LYS
38
n
38
LYS
38
A
GLU
39
n
39
GLU
39
A
PRO
40
n
40
PRO
40
A
ALA
41
n
41
ALA
41
A
VAL
42
n
42
VAL
42
A
LEU
43
n
43
LEU
43
A
THR
44
n
44
THR
44
A
LYS
45
n
45
LYS
45
A
ASN
46
n
46
ASN
46
A
ASP
47
n
47
ASP
47
A
PRO
48
n
48
PRO
48
A
ARG
49
n
49
ARG
49
A
LEU
50
n
50
LEU
50
A
LYS
51
n
51
LYS
51
A
THR
52
n
52
THR
52
A
ASP
53
n
53
ASP
53
A
PHE
54
n
54
PHE
54
A
GLU
55
n
55
GLU
55
A
GLU
56
n
56
GLU
56
A
ALA
57
n
57
ALA
57
A
ILE
58
n
58
ILE
58
A
PHE
59
n
59
PHE
59
A
SER
60
n
60
SER
60
A
LYS
61
n
61
LYS
61
A
TYR
62
n
62
TYR
62
A
VAL
63
n
63
VAL
63
A
GLY
64
n
64
GLY
64
A
ASN
65
n
65
ASN
65
A
LYS
66
n
66
LYS
66
A
ILE
67
n
67
ILE
67
A
THR
68
n
68
THR
68
A
GLU
69
n
69
GLU
69
A
VAL
70
n
70
VAL
70
A
ASP
71
n
71
ASP
71
A
GLU
72
n
72
GLU
72
A
TYR
73
n
73
TYR
73
A
MET
74
n
74
MET
74
A
LYS
75
n
75
LYS
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
VAL
78
n
78
VAL
78
A
ASP
79
n
79
ASP
79
A
HIS
80
n
80
HIS
80
A
TYR
81
n
81
TYR
81
A
ALA
82
n
82
ALA
82
A
GLY
83
n
83
GLY
83
A
GLN
84
n
84
GLN
84
A
LEU
85
n
85
LEU
85
A
MET
86
n
86
MET
86
A
SER
87
n
87
SER
87
A
LEU
88
n
88
LEU
88
A
ASP
89
n
89
ASP
89
A
ILE
90
n
90
ILE
90
A
ASN
91
n
91
ASN
91
A
THR
92
n
92
THR
92
A
GLU
93
n
93
GLU
93
A
GLN
94
n
94
GLN
94
A
MET
95
n
95
MET
95
A
CAS
96
n
96
CAS
96
A
LEU
97
n
97
LEU
97
A
GLU
98
n
98
GLU
98
A
ASP
99
n
99
ASP
99
A
ALA
100
n
100
ALA
100
A
MET
101
n
101
MET
101
A
TYR
102
n
102
TYR
102
A
GLY
103
n
103
GLY
103
A
THR
104
n
104
THR
104
A
ASP
105
n
105
ASP
105
A
GLY
106
n
106
GLY
106
A
LEU
107
n
107
LEU
107
A
GLU
108
n
108
GLU
108
A
ALA
109
n
109
ALA
109
A
LEU
110
n
110
LEU
110
A
ASP
111
n
111
ASP
111
A
LEU
112
n
112
LEU
112
A
SER
113
n
113
SER
113
A
THR
114
n
114
THR
114
A
SER
115
n
115
SER
115
A
ALA
116
n
116
ALA
116
A
GLY
117
n
117
GLY
117
A
TYR
118
n
118
TYR
118
A
PRO
119
n
119
PRO
119
A
TYR
120
n
120
TYR
120
A
VAL
121
n
121
VAL
121
A
ALA
122
n
122
ALA
122
A
MET
123
n
123
MET
123
A
GLY
124
n
124
GLY
124
A
LYS
125
n
125
LYS
125
A
LYS
126
n
126
LYS
126
A
LYS
127
n
127
LYS
127
A
ARG
128
n
128
ARG
128
A
ASP
129
n
129
ASP
129
A
ILE
130
n
130
ILE
130
A
LEU
131
n
131
LEU
131
A
ASN
132
n
132
ASN
132
A
LYS
133
n
133
LYS
133
A
GLN
134
n
134
GLN
134
A
THR
135
n
135
THR
135
A
ARG
136
n
136
ARG
136
A
ASP
137
n
137
ASP
137
A
THR
138
n
138
THR
138
A
LYS
139
n
139
LYS
139
A
GLU
140
n
140
GLU
140
A
MET
141
n
141
MET
141
A
GLN
142
n
142
GLN
142
A
LYS
143
n
143
LYS
143
A
LEU
144
n
144
LEU
144
A
LEU
145
n
145
LEU
145
A
ASP
146
n
146
ASP
146
A
THR
147
n
147
THR
147
A
TYR
148
n
148
TYR
148
A
GLY
149
n
149
GLY
149
A
ILE
150
n
150
ILE
150
A
ASN
151
n
151
ASN
151
A
LEU
152
n
152
LEU
152
A
PRO
153
n
153
PRO
153
A
LEU
154
n
154
LEU
154
A
VAL
155
n
155
VAL
155
A
THR
156
n
156
THR
156
A
TYR
157
n
157
TYR
157
A
VAL
158
n
158
VAL
158
A
LYS
159
n
159
LYS
159
A
ASP
160
n
160
ASP
160
A
GLU
161
n
161
GLU
161
A
LEU
162
n
162
LEU
162
A
ARG
163
n
163
ARG
163
A
SER
164
n
164
SER
164
A
LYS
165
n
165
LYS
165
A
THR
166
n
166
THR
166
A
LYS
167
n
167
LYS
167
A
VAL
168
n
168
VAL
168
A
GLU
169
n
169
GLU
169
A
GLN
170
n
170
GLN
170
A
GLY
171
n
171
GLY
171
A
LYS
172
n
172
LYS
172
A
SER
173
n
173
SER
173
A
ARG
174
n
174
ARG
174
A
LEU
175
n
175
LEU
175
A
ILE
176
n
176
ILE
176
A
GLU
177
n
177
GLU
177
A
ALA
178
n
178
ALA
178
A
SER
179
n
179
SER
179
A
SER
180
n
180
SER
180
A
LEU
181
n
181
LEU
181
A
ASN
182
n
182
ASN
182
A
ASP
183
n
183
ASP
183
A
SER
184
n
184
SER
184
A
VAL
185
n
185
VAL
185
A
ALA
186
n
186
ALA
186
A
MET
187
n
187
MET
187
A
ARG
188
n
188
ARG
188
A
MET
189
n
189
MET
189
A
ALA
190
n
190
ALA
190
A
PHE
191
n
191
PHE
191
A
GLY
192
n
192
GLY
192
A
ASN
193
n
193
ASN
193
A
LEU
194
n
194
LEU
194
A
TYR
195
n
195
TYR
195
A
ALA
196
n
196
ALA
196
A
ALA
197
n
197
ALA
197
A
PHE
198
n
198
PHE
198
A
HIS
199
n
199
HIS
199
A
LYS
200
n
200
LYS
200
A
ASN
201
n
201
ASN
201
A
PRO
202
n
202
PRO
202
A
GLY
203
n
203
GLY
203
A
VAL
204
n
204
VAL
204
A
ILE
205
n
205
ILE
205
A
THR
206
n
206
THR
206
A
GLY
207
n
207
GLY
207
A
SER
208
n
208
SER
208
A
ALA
209
n
209
ALA
209
A
VAL
210
n
210
VAL
210
A
GLY
211
n
211
GLY
211
A
CAS
212
n
212
CAS
212
A
ASP
213
n
213
ASP
213
A
PRO
214
n
214
PRO
214
A
ASP
215
n
215
ASP
215
A
LEU
216
n
216
LEU
216
A
PHE
217
n
217
PHE
217
A
TRP
218
n
218
TRP
218
A
SER
219
n
219
SER
219
A
LYS
220
n
220
LYS
220
A
ILE
221
n
221
ILE
221
A
PRO
222
n
222
PRO
222
A
VAL
223
n
223
VAL
223
A
LEU
224
n
224
LEU
224
A
MET
225
n
225
MET
225
A
GLU
226
n
226
GLU
226
A
GLU
227
n
227
GLU
227
A
LYS
228
n
228
LYS
228
A
LEU
229
n
229
LEU
229
A
PHE
230
n
230
PHE
230
A
ALA
231
n
231
ALA
231
A
PHE
232
n
232
PHE
232
A
ASP
233
n
233
ASP
233
A
TYR
234
n
234
TYR
234
A
THR
235
n
235
THR
235
A
GLY
236
n
236
GLY
236
A
TYR
237
n
237
TYR
237
A
ASP
238
n
238
ASP
238
A
ALA
239
n
239
ALA
239
A
SER
240
n
240
SER
240
A
LEU
241
n
241
LEU
241
A
SER
242
n
242
SER
242
A
PRO
243
n
243
PRO
243
A
ALA
244
n
244
ALA
244
A
TRP
245
n
245
TRP
245
A
PHE
246
n
246
PHE
246
A
GLU
247
n
247
GLU
247
A
ALA
248
n
248
ALA
248
A
LEU
249
n
249
LEU
249
A
LYS
250
n
250
LYS
250
A
MET
251
n
251
MET
251
A
VAL
252
n
252
VAL
252
A
LEU
253
n
253
LEU
253
A
GLU
254
n
254
GLU
254
A
LYS
255
n
255
LYS
255
A
ILE
256
n
256
ILE
256
A
GLY
257
n
257
GLY
257
A
PHE
258
n
258
PHE
258
A
GLY
259
n
259
GLY
259
A
ASP
260
n
260
ASP
260
A
ARG
261
n
261
ARG
261
A
VAL
262
n
262
VAL
262
A
ASP
263
n
263
ASP
263
A
TYR
264
n
264
TYR
264
A
ILE
265
n
265
ILE
265
A
ASP
266
n
266
ASP
266
A
TYR
267
n
267
TYR
267
A
LEU
268
n
268
LEU
268
A
ASN
269
n
269
ASN
269
A
HIS
270
n
270
HIS
270
A
SER
271
n
271
SER
271
A
HIS
272
n
272
HIS
272
A
HIS
273
n
273
HIS
273
A
LEU
274
n
274
LEU
274
A
TYR
275
n
275
TYR
275
A
LYS
276
n
276
LYS
276
A
ASN
277
n
277
ASN
277
A
LYS
278
n
278
LYS
278
A
THR
279
n
279
THR
279
A
TYR
280
n
280
TYR
280
A
CAS
281
n
281
CAS
281
A
VAL
282
n
282
VAL
282
A
LYS
283
n
283
LYS
283
A
GLY
284
n
284
GLY
284
A
GLY
285
n
285
GLY
285
A
MET
286
n
286
MET
286
A
PRO
287
n
287
PRO
287
A
SER
288
n
288
SER
288
A
GLY
289
n
289
GLY
289
A
CAS
290
n
290
CAS
290
A
SER
291
n
291
SER
291
A
GLY
292
n
292
GLY
292
A
THR
293
n
293
THR
293
A
SER
294
n
294
SER
294
A
ILE
295
n
295
ILE
295
A
PHE
296
n
296
PHE
296
A
ASN
297
n
297
ASN
297
A
SER
298
n
298
SER
298
A
MET
299
n
299
MET
299
A
ILE
300
n
300
ILE
300
A
ASN
301
n
301
ASN
301
A
ASN
302
n
302
ASN
302
A
LEU
303
n
303
LEU
303
A
ILE
304
n
304
ILE
304
A
ILE
305
n
305
ILE
305
A
ARG
306
n
306
ARG
306
A
THR
307
n
307
THR
307
A
LEU
308
n
308
LEU
308
A
LEU
309
n
309
LEU
309
A
LEU
310
n
310
LEU
310
A
LYS
311
n
311
LYS
311
A
THR
312
n
312
THR
312
A
TYR
313
n
313
TYR
313
A
LYS
314
n
314
LYS
314
A
GLY
315
n
315
GLY
315
A
ILE
316
n
316
ILE
316
A
ASP
317
n
317
ASP
317
A
LEU
318
n
318
LEU
318
A
ASP
319
n
319
ASP
319
A
HIS
320
n
320
HIS
320
A
LEU
321
n
321
LEU
321
A
LYS
322
n
322
LYS
322
A
MET
323
n
323
MET
323
A
ILE
324
n
324
ILE
324
A
ALA
325
n
325
ALA
325
A
TYR
326
n
326
TYR
326
A
GLY
327
n
327
GLY
327
A
ASP
328
n
328
ASP
328
A
ASP
329
n
329
ASP
329
A
VAL
330
n
330
VAL
330
A
ILE
331
n
331
ILE
331
A
ALA
332
n
332
ALA
332
A
SER
333
n
333
SER
333
A
TYR
334
n
334
TYR
334
A
PRO
335
n
335
PRO
335
A
HIS
336
n
336
HIS
336
A
GLU
337
n
337
GLU
337
A
VAL
338
n
338
VAL
338
A
ASP
339
n
339
ASP
339
A
ALA
340
n
340
ALA
340
A
SER
341
n
341
SER
341
A
LEU
342
n
342
LEU
342
A
LEU
343
n
343
LEU
343
A
ALA
344
n
344
ALA
344
A
GLN
345
n
345
GLN
345
A
SER
346
n
346
SER
346
A
GLY
347
n
347
GLY
347
A
LYS
348
n
348
LYS
348
A
ASP
349
n
349
ASP
349
A
TYR
350
n
350
TYR
350
A
GLY
351
n
351
GLY
351
A
LEU
352
n
352
LEU
352
A
THR
353
n
353
THR
353
A
MET
354
n
354
MET
354
A
THR
355
n
355
THR
355
A
PRO
356
n
356
PRO
356
A
ALA
357
n
357
ALA
357
A
ASP
358
n
358
ASP
358
A
LYS
359
n
359
LYS
359
A
SER
360
n
360
SER
360
A
ALA
361
n
361
ALA
361
A
THR
362
n
362
THR
362
A
PHE
363
n
363
PHE
363
A
GLU
364
n
364
GLU
364
A
THR
365
n
365
THR
365
A
VAL
366
n
366
VAL
366
A
THR
367
n
367
THR
367
A
TRP
368
n
368
TRP
368
A
GLU
369
n
369
GLU
369
A
ASN
370
n
370
ASN
370
A
VAL
371
n
371
VAL
371
A
THR
372
n
372
THR
372
A
PHE
373
n
373
PHE
373
A
LEU
374
n
374
LEU
374
A
LYS
375
n
375
LYS
375
A
ARG
376
n
376
ARG
376
A
PHE
377
n
377
PHE
377
A
PHE
378
n
378
PHE
378
A
ARG
379
n
379
ARG
379
A
ALA
380
n
380
ALA
380
A
ASP
381
n
381
ASP
381
A
GLU
382
n
382
GLU
382
A
LYS
383
n
383
LYS
383
A
TYR
384
n
384
TYR
384
A
PRO
385
n
385
PRO
385
A
PHE
386
n
386
PHE
386
A
LEU
387
n
387
LEU
387
A
ILE
388
n
388
ILE
388
A
HIS
389
n
389
HIS
389
A
PRO
390
n
390
PRO
390
A
VAL
391
n
391
VAL
391
A
MET
392
n
392
MET
392
A
PRO
393
n
393
PRO
393
A
MET
394
n
394
MET
394
A
LYS
395
n
395
LYS
395
A
GLU
396
n
396
GLU
396
A
ILE
397
n
397
ILE
397
A
HIS
398
n
398
HIS
398
A
GLU
399
n
399
GLU
399
A
SER
400
n
400
SER
400
A
ILE
401
n
401
ILE
401
A
ARG
402
n
402
ARG
402
A
TRP
403
n
403
TRP
403
A
THR
404
n
404
THR
404
A
LYS
405
n
405
LYS
405
A
ASP
406
n
406
ASP
406
A
PRO
407
n
407
PRO
407
A
ARG
408
n
408
ARG
408
A
ASN
409
n
409
ASN
409
A
THR
410
n
410
THR
410
A
GLN
411
n
411
GLN
411
A
ASP
412
n
412
ASP
412
A
HIS
413
n
413
HIS
413
A
VAL
414
n
414
VAL
414
A
ARG
415
n
415
ARG
415
A
SER
416
n
416
SER
416
A
LEU
417
n
417
LEU
417
A
CYS
418
n
418
CYS
418
A
LEU
419
n
419
LEU
419
A
LEU
420
n
420
LEU
420
A
ALA
421
n
421
ALA
421
A
TRP
422
n
422
TRP
422
A
HIS
423
n
423
HIS
423
A
ASN
424
n
424
ASN
424
A
GLY
425
n
425
GLY
425
A
GLU
426
n
426
GLU
426
A
GLU
427
n
427
GLU
427
A
GLU
428
n
428
GLU
428
A
TYR
429
n
429
TYR
429
A
ASN
430
n
430
ASN
430
A
LYS
431
n
431
LYS
431
A
PHE
432
n
432
PHE
432
A
LEU
433
n
433
LEU
433
A
ALA
434
n
434
ALA
434
A
LYS
435
n
435
LYS
435
A
ILE
436
n
436
ILE
436
A
ARG
437
n
437
ARG
437
A
SER
438
n
438
SER
438
A
VAL
439
n
439
VAL
439
A
PRO
440
n
440
PRO
440
A
ILE
441
n
441
ILE
441
A
GLY
442
n
442
GLY
442
A
ARG
443
n
443
ARG
443
A
ALA
444
n
444
ALA
444
A
LEU
445
n
445
LEU
445
A
ASP
446
n
446
ASP
446
A
LEU
447
n
447
LEU
447
A
PRO
448
n
448
PRO
448
A
GLU
449
n
449
GLU
449
A
TYR
450
n
450
TYR
450
A
SER
451
n
451
SER
451
A
THR
452
n
452
THR
452
A
LEU
453
n
453
LEU
453
A
TYR
454
n
454
TYR
454
A
ASP
455
n
455
ASP
455
A
ARG
456
n
456
ARG
456
A
TRP
457
n
457
TRP
457
A
LEU
458
n
458
LEU
458
A
ASP
459
n
459
ASP
459
A
SER
460
n
460
SER
460
A
PHE
461
n
461
PHE
461
A
author_defined_assembly
1
monomeric
A
CAS
96
S-(DIMETHYLARSENIC)CYSTEINE
A
CAS
96
CYS
A
CAS
212
S-(DIMETHYLARSENIC)CYSTEINE
A
CAS
212
CYS
A
CAS
281
S-(DIMETHYLARSENIC)CYSTEINE
A
CAS
281
CYS
A
CAS
290
S-(DIMETHYLARSENIC)CYSTEINE
A
CAS
290
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
2
A
N
GLU
2
A
O
LYS
283
A
O
LYS
283
A
O
TYR
280
A
O
TYR
280
A
N
HIS
273
A
N
HIS
273
A
O
LEU
274
A
O
LEU
274
A
N
LEU
154
A
N
LEU
154
A
N
TYR
157
A
N
TYR
157
A
O
ILE
176
A
O
ILE
176
A
N
GLU
26
A
N
GLU
26
A
O
THR
404
A
O
THR
404
A
N
GLU
39
A
N
GLU
39
A
O
ARG
163
A
O
ARG
163
A
N
LYS
228
A
N
LYS
228
A
O
TYR
334
A
O
TYR
334
A
O
ASP
329
A
O
ASP
329
A
N
TYR
326
A
N
TYR
326
A
N
ASP
233
A
N
ASP
233
A
O
THR
355
A
O
THR
355
A
N
ARG
379
A
N
ARG
379
A
O
HIS
389
A
O
HIS
389
1
A
ASP
47
-36.95
113.99
1
A
ASN
132
173.86
113.16
1
A
ARG
136
62.19
64.03
1
A
ASN
151
71.23
35.89
1
A
LYS
276
70.13
-116.27
1
A
LYS
375
68.76
-0.95
51.9
6.25
4.57
0.000
6.25
0.000
-12.49
residues 132-135 have poor sidechain density and the model reflects the backbone path in this region of the structure
0.247
0.231
2.0
30.0
6807
67110
67110
96.1
RANDOM
1
Anisotropic
THROUGHOUT
MOLECULAR REPLACEMENT
PDB ENTRY 1RDR
Engh & Huber
0.35
0.33
5.00
0.45
0.45
2.0
30.0
297
4036
32
0
3707
0.007
1.3
0.394
0.393
2.07
469
5256
93.7
2.0
30.0
1RA6
67110
67110
0.054
1
16.5
3.5
96.3
0.456
2.0
2.07
2.5
6514
1
3.1
93.7
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
Poliovirus Polymerase Full Length Apo Structure
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
ASP
53
A
ASP
53
HELX_P
A
SER
60
A
SER
60
1
1
8
A
ASP
71
A
ASP
71
HELX_P
A
SER
87
A
SER
87
1
2
17
A
CAS
96
A
CAS
96
HELX_P
A
GLY
103
A
GLY
103
1
3
8
A
LYS
126
A
LYS
126
HELX_P
A
LEU
131
A
LEU
131
1
4
6
A
THR
138
A
THR
138
HELX_P
A
TYR
148
A
TYR
148
1
5
11
A
SER
164
A
SER
164
HELX_P
A
GLN
170
A
GLN
170
1
6
7
A
SER
180
A
SER
180
HELX_P
A
ASN
201
A
ASN
201
1
7
22
A
ASP
213
A
ASP
213
HELX_P
A
TRP
218
A
TRP
218
1
8
6
A
LYS
220
A
LYS
220
HELX_P
A
MET
225
A
MET
225
1
9
6
A
GLY
236
A
GLY
236
HELX_P
A
LEU
241
A
LEU
241
1
10
6
A
SER
242
A
SER
242
HELX_P
A
ILE
256
A
ILE
256
1
11
15
A
GLY
257
A
GLY
257
HELX_P
A
GLY
257
A
GLY
257
5
12
1
A
PHE
258
A
PHE
258
HELX_P
A
ARG
261
A
ARG
261
5
13
4
A
VAL
262
A
VAL
262
HELX_P
A
ASN
269
A
ASN
269
1
14
8
A
GLY
292
A
GLY
292
HELX_P
A
TYR
313
A
TYR
313
1
15
22
A
ASP
317
A
ASP
317
HELX_P
A
LEU
321
A
LEU
321
5
16
5
A
ASP
339
A
ASP
339
HELX_P
A
TYR
350
A
TYR
350
1
17
12
A
PRO
393
A
PRO
393
HELX_P
A
ARG
402
A
ARG
402
1
18
10
A
ASP
406
A
ASP
406
HELX_P
A
ARG
408
A
ARG
408
5
19
3
A
ASN
409
A
ASN
409
HELX_P
A
TRP
422
A
TRP
422
1
20
14
A
GLY
425
A
GLY
425
HELX_P
A
ARG
437
A
ARG
437
1
21
13
A
VAL
439
A
VAL
439
HELX_P
A
ALA
444
A
ALA
444
1
22
6
A
GLU
449
A
GLU
449
HELX_P
A
PHE
461
A
PHE
461
1
23
13
covale
1.336
both
A
MET
95
A
C
MET
95
1_555
A
CAS
96
A
N
CAS
96
1_555
covale
1.330
both
A
CAS
96
A
C
CAS
96
1_555
A
LEU
97
A
N
LEU
97
1_555
covale
1.319
both
A
GLY
211
A
C
GLY
211
1_555
A
CAS
212
A
N
CAS
212
1_555
covale
1.329
both
A
CAS
212
A
C
CAS
212
1_555
A
ASP
213
A
N
ASP
213
1_555
covale
1.324
both
A
TYR
280
A
C
TYR
280
1_555
A
CAS
281
A
N
CAS
281
1_555
covale
1.324
both
A
CAS
281
A
C
CAS
281
1_555
A
VAL
282
A
N
VAL
282
1_555
covale
1.326
both
A
GLY
289
A
C
GLY
289
1_555
A
CAS
290
A
N
CAS
290
1_555
covale
1.319
both
A
CAS
290
A
C
CAS
290
1_555
A
SER
291
A
N
SER
291
1_555
TRANSFERASE
NUCLEOTIDYLTRANSFERASE, POLIOVIRUS, 3D, RNA-DEPENDENT, POLYMERASE, N-TERMINUS, transferase
A
TYR
118
A
TYR
118
1
A
PRO
119
A
PRO
119
0.10
POLH_POL1M
UNP
1
1748
P03300
GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH
YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD
ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS
LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDH
LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES
IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALLLPEYSTLYRRWLDSF
1748
2208
1RA6
1
461
P03300
A
1
1
461
1
CYS
modified residue
CAS
96
1RA6
A
P03300
UNP
1843
96
1
CYS
modified residue
CAS
212
1RA6
A
P03300
UNP
1959
212
1
CYS
modified residue
CAS
281
1RA6
A
P03300
UNP
2028
281
1
CYS
modified residue
CAS
290
1RA6
A
P03300
UNP
2037
290
1
LEU
engineered mutation
ASP
446
1RA6
A
P03300
UNP
2193
446
1
ARG
engineered mutation
ASP
455
1RA6
A
P03300
UNP
2202
455
5
2
2
3
2
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
2
A
GLU
2
A
PRO
8
A
PRO
8
A
LYS
278
A
LYS
278
A
LYS
283
A
LYS
283
A
HIS
270
A
HIS
270
A
TYR
275
A
TYR
275
A
LEU
154
A
LEU
154
A
VAL
158
A
VAL
158
A
LEU
175
A
LEU
175
A
ALA
178
A
ALA
178
A
GLU
26
A
GLU
26
A
PRO
27
A
PRO
27
A
TRP
403
A
TRP
403
A
THR
404
A
THR
404
A
GLU
39
A
GLU
39
A
PRO
40
A
PRO
40
A
LEU
162
A
LEU
162
A
ARG
163
A
ARG
163
A
LYS
228
A
LYS
228
A
PHE
230
A
PHE
230
A
ASP
329
A
ASP
329
A
TYR
334
A
TYR
334
A
LYS
322
A
LYS
322
A
TYR
326
A
TYR
326
A
ASP
233
A
ASP
233
A
TYR
234
A
TYR
234
A
MET
354
A
MET
354
A
THR
355
A
THR
355
A
PHE
377
A
PHE
377
A
ALA
380
A
ALA
380
A
ILE
388
A
ILE
388
A
VAL
391
A
VAL
391
BINDING SITE FOR RESIDUE ACY A 901
A
ACY
901
Software
7
BINDING SITE FOR RESIDUE ACY A 902
A
ACY
902
Software
4
BINDING SITE FOR RESIDUE ACY A 903
A
ACY
903
Software
2
BINDING SITE FOR RESIDUE ACY A 904
A
ACY
904
Software
5
BINDING SITE FOR RESIDUE ACY A 906
A
ACY
906
Software
1
BINDING SITE FOR RESIDUE ACY A 907
A
ACY
907
Software
2
BINDING SITE FOR RESIDUE ACY A 908
A
ACY
908
Software
5
A
SER
28
A
SER
28
7
1_555
A
ILE
401
A
ILE
401
7
1_555
A
TRP
403
A
TRP
403
7
1_555
A
THR
404
A
THR
404
7
1_555
A
THR
410
A
THR
410
7
1_555
A
HIS
413
A
HIS
413
7
1_555
A
HOH
738
J
HOH
7
1_555
A
ASP
71
A
ASP
71
4
1_555
A
LYS
311
A
LYS
311
4
1_555
A
ASP
349
A
ASP
349
4
1_555
A
TYR
350
A
TYR
350
4
1_555
A
LYS
375
A
LYS
375
2
1_555
A
LEU
417
A
LEU
417
2
1_555
A
TYR
334
A
TYR
334
5
5_765
A
HIS
336
A
HIS
336
5
5_765
A
PRO
440
A
PRO
440
5
1_555
A
ARG
443
A
ARG
443
5
1_555
A
HOH
615
J
HOH
5
1_555
A
HIS
270
A
HIS
270
1
1_555
A
HOH
733
J
HOH
2
1_555
A
HOH
734
J
HOH
2
1_555
A
ALA
357
A
ALA
357
5
1_555
A
SER
360
A
SER
360
5
1_555
A
ASN
370
A
ASN
370
5
1_555
A
HOH
587
J
HOH
5
1_555
A
HOH
647
J
HOH
5
1_555
170
P 65