1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Yamazaki, T. Fujiwara, M. Kato, T. Yamasaki, K. Nagayama, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking JA Biol.Pharm.Bull. 0918-6158 23 1147 11041241 Solution Structure of Ribonuclease Hi from Escherichia Coli 2000 US Biochemistry BICHAW 0033 0006-2960 32 5656 Complete Assignments of Magnetic Resonances of Ribonuclease H from Escherichia Coli by Double-and Triple-Resonance 2D and 3D NMR Spectroscopies 1993 New York : Plenum Press US Computational Aspects of the Study of Biological Macromolecules by Nuclear Magnetic Resonance Spectroscopy (in: Nato Asi Ser.,Ser.A, V.225) 2070 0-306-44114-4 233 A New Version of Dadas (Distance Analysis in Dihedral Angle Space) and its Performance 1991 1 2 3 10.2210/pdb1rch/pdb pdb_00001rch 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 17622.998 RIBONUCLEASE HI 3.1.26.4 1 nat polymer RNASE H no no MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQ WIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQ WIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia sample 562 Escherichia coli database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-02-12 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-03-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1995-06-23 REL REL 8 JEOL.LTD refinement DADAS90 MET 1 n 1 MET 1 A LEU 2 n 2 LEU 2 A LYS 3 n 3 LYS 3 A GLN 4 n 4 GLN 4 A VAL 5 n 5 VAL 5 A GLU 6 n 6 GLU 6 A ILE 7 n 7 ILE 7 A PHE 8 n 8 PHE 8 A THR 9 n 9 THR 9 A ASP 10 n 10 ASP 10 A GLY 11 n 11 GLY 11 A SER 12 n 12 SER 12 A CYS 13 n 13 CYS 13 A LEU 14 n 14 LEU 14 A GLY 15 n 15 GLY 15 A ASN 16 n 16 ASN 16 A PRO 17 n 17 PRO 17 A GLY 18 n 18 GLY 18 A PRO 19 n 19 PRO 19 A GLY 20 n 20 GLY 20 A GLY 21 n 21 GLY 21 A TYR 22 n 22 TYR 22 A GLY 23 n 23 GLY 23 A ALA 24 n 24 ALA 24 A ILE 25 n 25 ILE 25 A LEU 26 n 26 LEU 26 A ARG 27 n 27 ARG 27 A TYR 28 n 28 TYR 28 A ARG 29 n 29 ARG 29 A GLY 30 n 30 GLY 30 A ARG 31 n 31 ARG 31 A GLU 32 n 32 GLU 32 A LYS 33 n 33 LYS 33 A THR 34 n 34 THR 34 A PHE 35 n 35 PHE 35 A SER 36 n 36 SER 36 A ALA 37 n 37 ALA 37 A GLY 38 n 38 GLY 38 A TYR 39 n 39 TYR 39 A THR 40 n 40 THR 40 A ARG 41 n 41 ARG 41 A THR 42 n 42 THR 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A ASN 45 n 45 ASN 45 A ARG 46 n 46 ARG 46 A MET 47 n 47 MET 47 A GLU 48 n 48 GLU 48 A LEU 49 n 49 LEU 49 A MET 50 n 50 MET 50 A ALA 51 n 51 ALA 51 A ALA 52 n 52 ALA 52 A ILE 53 n 53 ILE 53 A VAL 54 n 54 VAL 54 A ALA 55 n 55 ALA 55 A LEU 56 n 56 LEU 56 A GLU 57 n 57 GLU 57 A ALA 58 n 58 ALA 58 A LEU 59 n 59 LEU 59 A LYS 60 n 60 LYS 60 A GLU 61 n 61 GLU 61 A HIS 62 n 62 HIS 62 A CYS 63 n 63 CYS 63 A GLU 64 n 64 GLU 64 A VAL 65 n 65 VAL 65 A ILE 66 n 66 ILE 66 A LEU 67 n 67 LEU 67 A SER 68 n 68 SER 68 A THR 69 n 69 THR 69 A ASP 70 n 70 ASP 70 A SER 71 n 71 SER 71 A GLN 72 n 72 GLN 72 A TYR 73 n 73 TYR 73 A VAL 74 n 74 VAL 74 A ARG 75 n 75 ARG 75 A GLN 76 n 76 GLN 76 A GLY 77 n 77 GLY 77 A ILE 78 n 78 ILE 78 A THR 79 n 79 THR 79 A GLN 80 n 80 GLN 80 A TRP 81 n 81 TRP 81 A ILE 82 n 82 ILE 82 A HIS 83 n 83 HIS 83 A ASN 84 n 84 ASN 84 A TRP 85 n 85 TRP 85 A LYS 86 n 86 LYS 86 A LYS 87 n 87 LYS 87 A ARG 88 n 88 ARG 88 A GLY 89 n 89 GLY 89 A TRP 90 n 90 TRP 90 A LYS 91 n 91 LYS 91 A THR 92 n 92 THR 92 A ALA 93 n 93 ALA 93 A ASP 94 n 94 ASP 94 A LYS 95 n 95 LYS 95 A LYS 96 n 96 LYS 96 A PRO 97 n 97 PRO 97 A VAL 98 n 98 VAL 98 A LYS 99 n 99 LYS 99 A ASN 100 n 100 ASN 100 A VAL 101 n 101 VAL 101 A ASP 102 n 102 ASP 102 A LEU 103 n 103 LEU 103 A TRP 104 n 104 TRP 104 A GLN 105 n 105 GLN 105 A ARG 106 n 106 ARG 106 A LEU 107 n 107 LEU 107 A ASP 108 n 108 ASP 108 A ALA 109 n 109 ALA 109 A ALA 110 n 110 ALA 110 A LEU 111 n 111 LEU 111 A GLY 112 n 112 GLY 112 A GLN 113 n 113 GLN 113 A HIS 114 n 114 HIS 114 A GLN 115 n 115 GLN 115 A ILE 116 n 116 ILE 116 A LYS 117 n 117 LYS 117 A TRP 118 n 118 TRP 118 A GLU 119 n 119 GLU 119 A TRP 120 n 120 TRP 120 A VAL 121 n 121 VAL 121 A LYS 122 n 122 LYS 122 A GLY 123 n 123 GLY 123 A HIS 124 n 124 HIS 124 A ALA 125 n 125 ALA 125 A GLY 126 n 126 GLY 126 A HIS 127 n 127 HIS 127 A PRO 128 n 128 PRO 128 A GLU 129 n 129 GLU 129 A ASN 130 n 130 ASN 130 A GLU 131 n 131 GLU 131 A ARG 132 n 132 ARG 132 A CYS 133 n 133 CYS 133 A ASP 134 n 134 ASP 134 A GLU 135 n 135 GLU 135 A LEU 136 n 136 LEU 136 A ALA 137 n 137 ALA 137 A ARG 138 n 138 ARG 138 A ALA 139 n 139 ALA 139 A ALA 140 n 140 ALA 140 A ALA 141 n 141 ALA 141 A MET 142 n 142 MET 142 A ASN 143 n 143 ASN 143 A PRO 144 n 144 PRO 144 A THR 145 n 145 THR 145 A LEU 146 n 146 LEU 146 A GLU 147 n 147 GLU 147 A ASP 148 n 148 ASP 148 A THR 149 n 149 THR 149 A GLY 150 n 150 GLY 150 A TYR 151 n 151 TYR 151 A GLN 152 n 152 GLN 152 A VAL 153 n 153 VAL 153 A GLU 154 n 154 GLU 154 A VAL 155 n 155 VAL 155 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 31 A O ARG 31 A N TYR 28 A N TYR 28 A O GLY 21 A O GLY 21 A N SER 12 A N SER 12 A O VAL 5 A O VAL 5 A N ILE 66 A N ILE 66 A O VAL 65 A O VAL 65 A N LYS 117 A N LYS 117 2 A A O HD1 CYS HIS 63 114 1.56 3 A A O H VAL ILE 74 78 1.58 6 A A O H ILE GLU 53 57 1.60 7 A A O HG21 ILE ILE 78 82 0.84 7 A A O H TRP ASP 104 108 1.50 7 A A O HA TRP TRP 85 90 1.56 7 A A O H ARG MET 46 50 1.57 7 A A O HG12 VAL ILE 74 78 1.59 7 A A O CG2 ILE ILE 78 82 1.67 7 A A O CB GLN GLN 76 80 2.17 1 A ASP 10 -160.37 108.08 1 A ASN 16 -176.60 76.71 1 A TYR 28 -111.67 -165.01 1 A ARG 29 -54.81 97.03 1 A GLU 61 179.18 105.25 1 A HIS 62 -55.68 97.18 1 A ASP 70 -156.15 31.99 1 A THR 79 -94.71 39.29 1 A GLN 80 -158.85 -51.70 1 A ASP 94 -99.54 32.88 1 A LYS 95 50.91 90.38 1 A GLN 113 -147.56 -52.25 1 A HIS 124 -151.46 -52.58 1 A ALA 125 -93.91 35.58 1 A MET 142 -95.75 33.09 1 A ASN 143 -160.39 72.68 1 A THR 145 -148.74 38.68 2 A ASP 10 -160.69 92.92 2 A ASN 16 -168.24 77.66 2 A ARG 29 -58.98 94.89 2 A LEU 59 -61.83 97.59 2 A LYS 60 -96.18 46.20 2 A ASP 70 -160.15 34.70 2 A THR 79 -93.98 40.82 2 A GLN 80 -152.50 -51.12 2 A ASP 94 -99.01 34.66 2 A ALA 125 -91.38 51.15 2 A THR 145 -156.78 -49.93 2 A GLN 152 -146.92 -81.05 2 A VAL 153 60.39 60.67 3 A GLN 4 -174.10 128.92 3 A ASP 10 -160.25 97.69 3 A ASN 16 -175.49 76.98 3 A TYR 28 -114.88 -165.07 3 A ARG 29 -55.79 97.21 3 A ARG 41 -164.51 114.40 3 A LYS 60 -141.40 52.67 3 A HIS 62 -68.18 76.74 3 A ILE 78 -68.28 -70.09 3 A THR 79 -94.99 40.29 3 A GLN 80 -159.48 -52.17 3 A TRP 90 56.51 78.62 3 A THR 92 -132.79 -61.66 3 A ALA 93 -157.25 -72.94 3 A ASP 94 -96.16 45.53 3 A LYS 95 59.02 90.29 3 A GLN 113 -137.64 -50.02 3 A HIS 124 -150.84 -55.32 3 A MET 142 -94.28 36.53 3 A ASN 143 -155.69 67.96 4 A LEU 2 64.33 125.19 4 A ILE 7 -109.73 78.19 4 A ASN 16 -170.71 78.35 4 A ARG 29 -49.52 99.64 4 A SER 36 -151.14 70.52 4 A ALA 37 -78.57 -168.70 4 A LEU 59 -57.29 -172.09 4 A LYS 60 -158.58 31.22 4 A HIS 62 -65.43 84.11 4 A ASP 70 -154.63 46.92 4 A THR 79 -93.76 38.07 4 A GLN 80 -157.62 -48.05 4 A ASP 94 -68.59 90.00 4 A GLN 113 -140.00 -53.12 4 A LYS 122 -155.38 67.19 4 A MET 142 -97.91 35.02 4 A ASN 143 -161.20 80.87 4 A THR 145 -150.37 -56.85 4 A THR 149 -101.12 41.29 4 A VAL 153 -151.72 43.79 4 A GLU 154 -55.44 -179.71 5 A ASP 10 -160.30 97.48 5 A ASN 16 -176.38 76.35 5 A ARG 29 63.56 -154.03 5 A GLU 61 178.86 108.77 5 A HIS 62 -55.88 98.35 5 A THR 69 -169.38 -169.45 5 A ASP 70 -159.65 34.25 5 A ILE 78 -76.36 -72.69 5 A HIS 83 -58.32 -72.52 5 A ASP 94 -98.90 32.93 5 A LYS 95 50.99 90.30 5 A GLN 113 -148.55 -52.63 5 A ALA 125 -90.56 53.64 5 A MET 142 -94.93 35.66 5 A ASN 143 -160.23 77.25 5 A THR 149 -53.44 -82.22 6 A ASP 10 -160.37 90.22 6 A ASN 16 53.66 90.10 6 A PRO 17 -75.02 -78.38 6 A TYR 28 -105.44 -164.98 6 A ARG 29 -53.54 96.72 6 A THR 43 -114.49 -166.94 6 A LYS 60 -100.89 54.09 6 A CYS 63 -143.28 -146.50 6 A THR 69 -166.83 -169.03 6 A ASP 70 -158.75 32.83 6 A ILE 78 -67.90 -75.16 6 A GLN 80 -95.33 -66.16 6 A HIS 83 -59.07 -72.03 6 A TRP 85 -58.08 -72.38 6 A ASP 94 -97.24 39.17 6 A LYS 95 38.97 82.40 6 A GLN 113 -78.22 -70.15 6 A ALA 125 -90.34 53.08 6 A MET 142 -93.36 32.83 6 A ASN 143 -160.30 78.17 6 A THR 145 -149.32 -50.93 7 A GLN 4 -172.64 147.20 7 A ASP 10 -160.68 97.41 7 A SER 12 -157.94 87.54 7 A ASN 16 -170.19 76.75 7 A TYR 28 -104.73 -164.72 7 A ARG 29 -55.94 91.02 7 A SER 36 -161.60 97.16 7 A GLU 61 -177.49 112.58 7 A ASP 70 -92.60 38.24 7 A THR 79 -96.04 35.81 7 A GLN 80 -147.66 -53.60 7 A LYS 86 -92.33 -80.63 7 A ARG 88 -44.47 -97.52 7 A ASP 94 -85.80 48.52 7 A LYS 95 30.35 63.74 7 A GLN 113 -144.69 -58.27 7 A ALA 125 -90.26 52.24 7 A THR 145 -151.56 38.95 7 A GLU 154 -155.73 -58.00 8 A ASP 10 -160.50 90.09 8 A ASN 16 -167.14 77.94 8 A ARG 29 63.01 -153.77 8 A GLU 61 174.03 127.54 8 A THR 69 -170.01 -172.23 8 A ASP 70 -153.64 32.79 8 A THR 79 -93.96 41.30 8 A GLN 80 -153.18 -51.13 8 A LYS 86 -48.36 -70.28 8 A THR 92 -128.05 -53.79 8 A ALA 93 -153.84 -73.29 8 A LEU 107 -70.62 -70.90 8 A GLN 113 -148.02 -52.59 8 A LYS 122 -79.26 32.27 8 A ALA 125 -67.51 -116.53 8 A MET 142 -95.51 35.47 8 A ASN 143 -158.10 71.22 8 A THR 145 -148.98 56.19 8 A THR 149 -89.19 -75.91 8 A TYR 151 -54.92 107.66 SOLUTION NMR STRUCTURE OF RIBONUCLEASE HI FROM ESCHERICHIA COLI, 8 STRUCTURES 1 Y N A ASN 44 A ASN 44 HELX_P A ALA 58 A ALA 58 1 1 15 A GLN 72 A GLN 72 HELX_P A ILE 78 A ILE 78 1 2 7 A TRP 81 A TRP 81 HELX_P A ARG 88 A ARG 88 1 3 8 A VAL 101 A VAL 101 HELX_P A LEU 111 A LEU 111 1 4 11 A PRO 128 A PRO 128 HELX_P A ALA 141 A ALA 141 1 5 14 ENDONUCLEASE HYDROLASE, NUCLEASE, ENDONUCLEASE, MAGNESIUM A ASN 16 A ASN 16 1 A PRO 17 A PRO 17 -4.09 A ASN 16 A ASN 16 2 A PRO 17 A PRO 17 -2.11 A ASN 16 A ASN 16 3 A PRO 17 A PRO 17 -6.30 A ASN 16 A ASN 16 4 A PRO 17 A PRO 17 5.43 A ASN 16 A ASN 16 5 A PRO 17 A PRO 17 -2.26 A ASN 16 A ASN 16 6 A PRO 17 A PRO 17 -5.90 A ASN 16 A ASN 16 7 A PRO 17 A PRO 17 -0.43 A ASN 16 A ASN 16 8 A PRO 17 A PRO 17 -0.94 RNH_ECOLI UNP 1 1 P0A7Y4 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQ WIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV 1 155 1RCH 1 155 P0A7Y4 A 1 1 155 5 anti-parallel anti-parallel parallel parallel A ARG 31 A ARG 31 A SER 36 A SER 36 A GLY 21 A GLY 21 A TYR 28 A TYR 28 A GLN 4 A GLN 4 A CYS 13 A CYS 13 A GLU 64 A GLU 64 A SER 68 A SER 68 A HIS 114 A HIS 114 A LYS 122 A LYS 122 1 P 1