0.019419 0.000000 0.000000 0.000000 0.018716 0.000000 0.000000 0.000000 0.009574 0.00000 0.00000 0.00000 De Genst, E. Silence, K. Ghahroudi, M.A. Decanniere, K. Loris, R. Kinne, J. Wyns, L. Muyldermans, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 51.496 53.430 104.454 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 280 14114 14121 10.1074/jbc.M413011200 15659390 Strong in vivo maturation compensates for structurally restricted H3 loops in antibody repertoires. 2005 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2002-03-11 ADSC QUANTUM 4 SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 0.933 1.0 ID14-2 ESRF 0.933 SYNCHROTRON ESRF BEAMLINE ID14-2 14717.281 camelid ANTIBODY HEAVY CHAIN VHH domain, VARIABLE DOMAIN 1 man polymer 14331.160 Lysozyme C 3.2.1.17 1 nat polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 231 nat water 1D2L19 1,4-beta-N-acetylmuramidase C, Allergen Gal d 4, Gal d IV no no DVQLVESGGGSVQAGGSLRLSCAVSGYKDRNYCMGWFRRAPGKEREGVAVIDSSGRTAYADSVKGRFTISRDVALDTAYL QMNSLKPEDTAMYYCAAGWSSLGSCGTNRNRYNYWGQGTQVTVSSRGRHHHHHH DVQLVESGGGSVQAGGSLRLSCAVSGYKDRNYCMGWFRRAPGKEREGVAVIDSSGRTAYADSVKGRFTISRDVALDTAYL QMNSLKPEDTAMYYCAAGWSSLGSCGTNRNRYNYWGQGTQVTVSSRGRHHHHHH A polypeptide(L) no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Arabian camel Camelus Blood Lymphocytes Escherichia sample 9838 Camelus dromedarius 562 Escherichia coli WK6Su plasmid pHEN chicken Gallus sample 9031 Gallus gallus Egg White 1 2.47 50.27 VAPOR DIFFUSION, HANGING DROP 8.5 PEG 4000, lithium sulphate, Tris-HCl, glycerol, sodium chloride, potassium phosphate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 repository Initial release Version format compliance Non-polymer description Version format compliance 1 0 2005-02-01 1 1 2008-04-29 1 2 2011-07-13 SEQUENCE The sequence of camelid heavy chain antibody (chain A) is not available in any reference sequence database. RCSB Y RCSB 2003-11-17 REL REL GOL GLYCEROL HOH water GOL 1758 3 GOL GOL 1758 B TIP 2 4 HOH HOH 135 A TIP 3 4 HOH HOH 136 A TIP 4 4 HOH HOH 137 A TIP 6 4 HOH HOH 138 A TIP 10 4 HOH HOH 139 A TIP 11 4 HOH HOH 140 A TIP 12 4 HOH HOH 141 A TIP 15 4 HOH HOH 142 A TIP 16 4 HOH HOH 143 A TIP 18 4 HOH HOH 144 A TIP 19 4 HOH HOH 145 A TIP 21 4 HOH HOH 146 A TIP 22 4 HOH HOH 147 A TIP 24 4 HOH HOH 148 A TIP 28 4 HOH HOH 149 A TIP 33 4 HOH HOH 150 A TIP 35 4 HOH HOH 151 A TIP 39 4 HOH HOH 152 A TIP 43 4 HOH HOH 153 A TIP 45 4 HOH HOH 154 A TIP 46 4 HOH HOH 155 A TIP 49 4 HOH HOH 156 A TIP 51 4 HOH HOH 157 A TIP 53 4 HOH HOH 158 A TIP 55 4 HOH HOH 159 A TIP 57 4 HOH HOH 160 A TIP 58 4 HOH HOH 161 A TIP 59 4 HOH HOH 162 A TIP 62 4 HOH HOH 163 A TIP 64 4 HOH HOH 164 A TIP 70 4 HOH HOH 165 A TIP 73 4 HOH HOH 166 A TIP 74 4 HOH HOH 167 A TIP 79 4 HOH HOH 168 A TIP 80 4 HOH HOH 169 A TIP 83 4 HOH HOH 170 A TIP 84 4 HOH HOH 171 A TIP 86 4 HOH HOH 172 A TIP 87 4 HOH HOH 173 A TIP 88 4 HOH HOH 174 A TIP 93 4 HOH HOH 175 A TIP 95 4 HOH HOH 176 A TIP 99 4 HOH HOH 177 A TIP 101 4 HOH HOH 178 A TIP 102 4 HOH HOH 179 A TIP 103 4 HOH HOH 180 A TIP 105 4 HOH HOH 181 A TIP 108 4 HOH HOH 182 A TIP 109 4 HOH HOH 183 A TIP 111 4 HOH HOH 184 A TIP 112 4 HOH HOH 185 A TIP 114 4 HOH HOH 186 A TIP 118 4 HOH HOH 187 A TIP 119 4 HOH HOH 188 A TIP 120 4 HOH HOH 189 A TIP 122 4 HOH HOH 190 A TIP 124 4 HOH HOH 191 A TIP 125 4 HOH HOH 192 A TIP 127 4 HOH HOH 193 A TIP 131 4 HOH HOH 194 A TIP 136 4 HOH HOH 195 A TIP 137 4 HOH HOH 196 A TIP 139 4 HOH HOH 197 A TIP 140 4 HOH HOH 198 A TIP 141 4 HOH HOH 199 A TIP 142 4 HOH HOH 200 A TIP 146 4 HOH HOH 201 A TIP 147 4 HOH HOH 202 A TIP 148 4 HOH HOH 203 A TIP 149 4 HOH HOH 204 A TIP 152 4 HOH HOH 205 A TIP 154 4 HOH HOH 206 A TIP 157 4 HOH HOH 207 A TIP 158 4 HOH HOH 208 A TIP 162 4 HOH HOH 209 A TIP 163 4 HOH HOH 210 A TIP 165 4 HOH HOH 211 A TIP 166 4 HOH HOH 212 A TIP 167 4 HOH HOH 213 A TIP 168 4 HOH HOH 214 A TIP 169 4 HOH HOH 215 A TIP 170 4 HOH HOH 216 A TIP 172 4 HOH HOH 217 A TIP 173 4 HOH HOH 218 A TIP 181 4 HOH HOH 219 A TIP 183 4 HOH HOH 220 A TIP 184 4 HOH HOH 221 A TIP 186 4 HOH HOH 222 A TIP 188 4 HOH HOH 223 A TIP 189 4 HOH HOH 224 A TIP 191 4 HOH HOH 225 A TIP 193 4 HOH HOH 226 A TIP 197 4 HOH HOH 227 A TIP 198 4 HOH HOH 228 A TIP 201 4 HOH HOH 229 A TIP 202 4 HOH HOH 230 A TIP 203 4 HOH HOH 231 A TIP 205 4 HOH HOH 232 A TIP 207 4 HOH HOH 233 A TIP 209 4 HOH HOH 234 A TIP 210 4 HOH HOH 235 A TIP 216 4 HOH HOH 236 A TIP 218 4 HOH HOH 237 A TIP 220 4 HOH HOH 238 A TIP 224 4 HOH HOH 239 A TIP 226 4 HOH HOH 240 A TIP 227 4 HOH HOH 241 A TIP 228 4 HOH HOH 242 A TIP 229 4 HOH HOH 243 A TIP 230 4 HOH HOH 244 A TIP 1 4 HOH HOH 1759 B TIP 5 4 HOH HOH 1760 B TIP 7 4 HOH HOH 1761 B TIP 8 4 HOH HOH 1762 B TIP 9 4 HOH HOH 1763 B TIP 13 4 HOH HOH 1764 B TIP 14 4 HOH HOH 1765 B TIP 17 4 HOH HOH 1766 B TIP 20 4 HOH HOH 1767 B TIP 23 4 HOH HOH 1768 B TIP 25 4 HOH HOH 1769 B TIP 26 4 HOH HOH 1770 B TIP 27 4 HOH HOH 1771 B TIP 29 4 HOH HOH 1772 B TIP 30 4 HOH HOH 1773 B TIP 31 4 HOH HOH 1774 B TIP 32 4 HOH HOH 1775 B TIP 34 4 HOH HOH 1776 B TIP 36 4 HOH HOH 1777 B TIP 37 4 HOH HOH 1778 B TIP 38 4 HOH HOH 1779 B TIP 40 4 HOH HOH 1780 B TIP 41 4 HOH HOH 1781 B TIP 42 4 HOH HOH 1782 B TIP 44 4 HOH HOH 1783 B TIP 47 4 HOH HOH 1784 B TIP 48 4 HOH HOH 1785 B TIP 50 4 HOH HOH 1786 B TIP 52 4 HOH HOH 1787 B TIP 54 4 HOH HOH 1788 B TIP 56 4 HOH HOH 1789 B TIP 60 4 HOH HOH 1790 B TIP 61 4 HOH HOH 1791 B TIP 63 4 HOH HOH 1792 B TIP 65 4 HOH HOH 1793 B TIP 66 4 HOH HOH 1794 B TIP 67 4 HOH HOH 1795 B TIP 68 4 HOH HOH 1796 B TIP 69 4 HOH HOH 1797 B TIP 71 4 HOH HOH 1798 B TIP 72 4 HOH HOH 1799 B TIP 75 4 HOH HOH 1800 B TIP 76 4 HOH HOH 1801 B TIP 77 4 HOH HOH 1802 B TIP 78 4 HOH HOH 1803 B TIP 81 4 HOH HOH 1804 B TIP 82 4 HOH HOH 1805 B TIP 85 4 HOH HOH 1806 B TIP 89 4 HOH HOH 1807 B TIP 90 4 HOH HOH 1808 B TIP 91 4 HOH HOH 1809 B TIP 92 4 HOH HOH 1810 B TIP 94 4 HOH HOH 1811 B TIP 96 4 HOH HOH 1812 B TIP 97 4 HOH HOH 1813 B TIP 98 4 HOH HOH 1814 B TIP 100 4 HOH HOH 1815 B TIP 104 4 HOH HOH 1816 B TIP 106 4 HOH HOH 1817 B TIP 107 4 HOH HOH 1818 B TIP 110 4 HOH HOH 1819 B TIP 113 4 HOH HOH 1820 B TIP 115 4 HOH HOH 1821 B TIP 116 4 HOH HOH 1822 B TIP 117 4 HOH HOH 1823 B TIP 121 4 HOH HOH 1824 B TIP 123 4 HOH HOH 1825 B TIP 126 4 HOH HOH 1826 B TIP 128 4 HOH HOH 1827 B TIP 129 4 HOH HOH 1828 B TIP 130 4 HOH HOH 1829 B TIP 132 4 HOH HOH 1830 B TIP 133 4 HOH HOH 1831 B TIP 134 4 HOH HOH 1832 B TIP 135 4 HOH HOH 1833 B TIP 138 4 HOH HOH 1834 B TIP 143 4 HOH HOH 1835 B TIP 144 4 HOH HOH 1836 B TIP 145 4 HOH HOH 1837 B TIP 150 4 HOH HOH 1838 B TIP 151 4 HOH HOH 1839 B TIP 153 4 HOH HOH 1840 B TIP 155 4 HOH HOH 1841 B TIP 156 4 HOH HOH 1842 B TIP 159 4 HOH HOH 1843 B TIP 160 4 HOH HOH 1844 B TIP 161 4 HOH HOH 1845 B TIP 164 4 HOH HOH 1846 B TIP 171 4 HOH HOH 1847 B TIP 174 4 HOH HOH 1848 B TIP 175 4 HOH HOH 1849 B TIP 176 4 HOH HOH 1850 B TIP 177 4 HOH HOH 1851 B TIP 178 4 HOH HOH 1852 B TIP 179 4 HOH HOH 1853 B TIP 180 4 HOH HOH 1854 B TIP 182 4 HOH HOH 1855 B TIP 185 4 HOH HOH 1856 B TIP 187 4 HOH HOH 1857 B TIP 190 4 HOH HOH 1858 B TIP 192 4 HOH HOH 1859 B TIP 194 4 HOH HOH 1860 B TIP 195 4 HOH HOH 1861 B TIP 196 4 HOH HOH 1862 B TIP 199 4 HOH HOH 1863 B TIP 200 4 HOH HOH 1864 B TIP 204 4 HOH HOH 1865 B TIP 206 4 HOH HOH 1866 B TIP 208 4 HOH HOH 1867 B TIP 211 4 HOH HOH 1868 B TIP 212 4 HOH HOH 1869 B TIP 213 4 HOH HOH 1870 B TIP 214 4 HOH HOH 1871 B TIP 215 4 HOH HOH 1872 B TIP 217 4 HOH HOH 1873 B TIP 219 4 HOH HOH 1874 B TIP 221 4 HOH HOH 1875 B TIP 222 4 HOH HOH 1876 B TIP 223 4 HOH HOH 1877 B TIP 225 4 HOH HOH 1878 B TIP 231 4 HOH HOH 1879 B n 1 1 A VAL 2 n 2 VAL 2 A GLN 3 n 3 GLN 3 A LEU 4 n 4 LEU 4 A VAL 5 n 5 VAL 5 A GLU 6 n 6 GLU 6 A SER 7 n 7 SER 7 A GLY 8 n 8 GLY 8 A GLY 9 n 9 GLY 9 A GLY 10 n 10 GLY 10 A SER 11 n 11 SER 11 A VAL 12 n 12 VAL 12 A GLN 13 n 13 GLN 13 A ALA 14 n 14 ALA 14 A GLY 15 n 15 GLY 15 A GLY 16 n 16 GLY 16 A SER 17 n 17 SER 17 A LEU 18 n 18 LEU 18 A ARG 19 n 19 ARG 19 A LEU 20 n 20 LEU 20 A SER 21 n 21 SER 21 A CYS 22 n 22 CYS 22 A ALA 23 n 23 ALA 23 A VAL 24 n 24 VAL 24 A SER 25 n 25 SER 25 A GLY 26 n 26 GLY 26 A TYR 27 n 27 TYR 27 A LYS 28 n 28 LYS 28 A ASP 29 n 29 ASP 29 A ARG 30 n 30 ARG 30 A ASN 31 n 31 ASN 31 A TYR 32 n 32 TYR 32 A CYS 33 n 33 CYS 33 A MET 34 n 34 MET 34 A GLY 35 n 35 GLY 35 A TRP 36 n 36 TRP 36 A PHE 37 n 37 PHE 37 A ARG 38 n 38 ARG 38 A ARG 39 n 39 ARG 39 A ALA 40 n 40 ALA 40 A PRO 41 n 41 PRO 41 A GLY 42 n 42 GLY 42 A LYS 43 n 43 LYS 43 A GLU 44 n 44 GLU 44 A ARG 45 n 45 ARG 45 A GLU 46 n 46 GLU 46 A GLY 47 n 47 GLY 47 A VAL 48 n 48 VAL 48 A ALA 49 n 49 ALA 49 A VAL 50 n 50 VAL 50 A ILE 51 n 51 ILE 51 A ASP 52 n 52 ASP 52 A SER 53 n 53 SER 53 A SER 54 n 54 SER 54 A GLY 55 n 55 GLY 55 A ARG 56 n 56 ARG 56 A THR 57 n 57 THR 57 A ALA 58 n 58 ALA 58 A TYR 59 n 59 TYR 59 A ALA 60 n 60 ALA 60 A ASP 61 n 61 ASP 61 A SER 62 n 62 SER 62 A VAL 63 n 63 VAL 63 A LYS 64 n 64 LYS 64 A GLY 65 n 65 GLY 65 A ARG 66 n 66 ARG 66 A PHE 67 n 67 PHE 67 A THR 68 n 68 THR 68 A ILE 69 n 69 ILE 69 A SER 70 n 70 SER 70 A ARG 71 n 71 ARG 71 A ASP 72 n 72 ASP 72 A VAL 73 n 73 VAL 73 A ALA 74 n 74 ALA 74 A LEU 75 n 75 LEU 75 A ASP 76 n 76 ASP 76 A THR 77 n 77 THR 77 A ALA 78 n 78 ALA 78 A TYR 79 n 79 TYR 79 A LEU 80 n 80 LEU 80 A GLN 81 n 81 GLN 81 A MET 82 n 82 MET 82 A ASN 83 n 83 ASN 83 A SER 84 n 84 SER 84 A LEU 85 n 85 LEU 85 A LYS 86 n 86 LYS 86 A PRO 87 n 87 PRO 87 A GLU 88 n 88 GLU 88 A ASP 89 n 89 ASP 89 A THR 90 n 90 THR 90 A ALA 91 n 91 ALA 91 A MET 92 n 92 MET 92 A TYR 93 n 93 TYR 93 A TYR 94 n 94 TYR 94 A CYS 95 n 95 CYS 95 A ALA 96 n 96 ALA 96 A ALA 97 n 97 ALA 97 A GLY 98 n 98 GLY 98 A TRP 99 n 99 TRP 99 A SER 100 n 100 SER 100 A SER 101 n 101 SER 101 A LEU 102 n 102 LEU 102 A GLY 103 n 103 GLY 103 A SER 104 n 104 SER 104 A CYS 105 n 105 CYS 105 A GLY 106 n 106 GLY 106 A THR 107 n 107 THR 107 A ASN 108 n 108 ASN 108 A ARG 109 n 109 ARG 109 A ASN 110 n 110 ASN 110 A ARG 111 n 111 ARG 111 A TYR 112 n 112 TYR 112 A ASN 113 n 113 ASN 113 A TYR 114 n 114 TYR 114 A TRP 115 n 115 TRP 115 A GLY 116 n 116 GLY 116 A GLN 117 n 117 GLN 117 A GLY 118 n 118 GLY 118 A THR 119 n 119 THR 119 A GLN 120 n 120 GLN 120 A VAL 121 n 121 VAL 121 A THR 122 n 122 THR 122 A VAL 123 n 123 VAL 123 A SER 124 n 124 SER 124 A SER 125 n 125 SER 125 A n 126 126 A n 127 127 A n 128 128 A n 129 129 A n 130 130 A n 131 131 A n 132 132 A n 133 133 A n 134 134 A LYS 1 n 1 LYS 1 B VAL 2 n 2 VAL 2 B PHE 3 n 3 PHE 3 B GLY 4 n 4 GLY 4 B ARG 5 n 5 ARG 5 B CYS 6 n 6 CYS 6 B GLU 7 n 7 GLU 7 B LEU 8 n 8 LEU 8 B ALA 9 n 9 ALA 9 B ALA 10 n 10 ALA 10 B ALA 11 n 11 ALA 11 B MET 12 n 12 MET 12 B LYS 13 n 13 LYS 13 B ARG 14 n 14 ARG 14 B HIS 15 n 15 HIS 15 B GLY 16 n 16 GLY 16 B LEU 17 n 17 LEU 17 B ASP 18 n 18 ASP 18 B ASN 19 n 19 ASN 19 B TYR 20 n 20 TYR 20 B ARG 21 n 21 ARG 21 B GLY 22 n 22 GLY 22 B TYR 23 n 23 TYR 23 B SER 24 n 24 SER 24 B LEU 25 n 25 LEU 25 B GLY 26 n 26 GLY 26 B ASN 27 n 27 ASN 27 B TRP 28 n 28 TRP 28 B VAL 29 n 29 VAL 29 B CYS 30 n 30 CYS 30 B ALA 31 n 31 ALA 31 B ALA 32 n 32 ALA 32 B LYS 33 n 33 LYS 33 B PHE 34 n 34 PHE 34 B GLU 35 n 35 GLU 35 B SER 36 n 36 SER 36 B ASN 37 n 37 ASN 37 B PHE 38 n 38 PHE 38 B ASN 39 n 39 ASN 39 B THR 40 n 40 THR 40 B GLN 41 n 41 GLN 41 B ALA 42 n 42 ALA 42 B THR 43 n 43 THR 43 B ASN 44 n 44 ASN 44 B ARG 45 n 45 ARG 45 B ASN 46 n 46 ASN 46 B THR 47 n 47 THR 47 B ASP 48 n 48 ASP 48 B GLY 49 n 49 GLY 49 B SER 50 n 50 SER 50 B THR 51 n 51 THR 51 B ASP 52 n 52 ASP 52 B TYR 53 n 53 TYR 53 B GLY 54 n 54 GLY 54 B ILE 55 n 55 ILE 55 B LEU 56 n 56 LEU 56 B GLN 57 n 57 GLN 57 B ILE 58 n 58 ILE 58 B ASN 59 n 59 ASN 59 B SER 60 n 60 SER 60 B ARG 61 n 61 ARG 61 B TRP 62 n 62 TRP 62 B TRP 63 n 63 TRP 63 B CYS 64 n 64 CYS 64 B ASN 65 n 65 ASN 65 B ASP 66 n 66 ASP 66 B GLY 67 n 67 GLY 67 B ARG 68 n 68 ARG 68 B THR 69 n 69 THR 69 B PRO 70 n 70 PRO 70 B GLY 71 n 71 GLY 71 B SER 72 n 72 SER 72 B ARG 73 n 73 ARG 73 B ASN 74 n 74 ASN 74 B LEU 75 n 75 LEU 75 B CYS 76 n 76 CYS 76 B ASN 77 n 77 ASN 77 B ILE 78 n 78 ILE 78 B PRO 79 n 79 PRO 79 B CYS 80 n 80 CYS 80 B SER 81 n 81 SER 81 B ALA 82 n 82 ALA 82 B LEU 83 n 83 LEU 83 B LEU 84 n 84 LEU 84 B SER 85 n 85 SER 85 B SER 86 n 86 SER 86 B ASP 87 n 87 ASP 87 B ILE 88 n 88 ILE 88 B THR 89 n 89 THR 89 B ALA 90 n 90 ALA 90 B SER 91 n 91 SER 91 B VAL 92 n 92 VAL 92 B ASN 93 n 93 ASN 93 B CYS 94 n 94 CYS 94 B ALA 95 n 95 ALA 95 B LYS 96 n 96 LYS 96 B LYS 97 n 97 LYS 97 B ILE 98 n 98 ILE 98 B VAL 99 n 99 VAL 99 B SER 100 n 100 SER 100 B ASP 101 n 101 ASP 101 B GLY 102 n 102 GLY 102 B ASN 103 n 103 ASN 103 B GLY 104 n 104 GLY 104 B MET 105 n 105 MET 105 B ASN 106 n 106 ASN 106 B ALA 107 n 107 ALA 107 B TRP 108 n 108 TRP 108 B VAL 109 n 109 VAL 109 B ALA 110 n 110 ALA 110 B TRP 111 n 111 TRP 111 B ARG 112 n 112 ARG 112 B ASN 113 n 113 ASN 113 B ARG 114 n 114 ARG 114 B CYS 115 n 115 CYS 115 B LYS 116 n 116 LYS 116 B GLY 117 n 117 GLY 117 B THR 118 n 118 THR 118 B ASP 119 n 119 ASP 119 B VAL 120 n 120 VAL 120 B GLN 121 n 121 GLN 121 B ALA 122 n 122 ALA 122 B TRP 123 n 123 TRP 123 B ILE 124 n 124 ILE 124 B ARG 125 n 125 ARG 125 B GLY 126 n 126 GLY 126 B CYS 127 n 127 CYS 127 B ARG 128 n 128 ARG 128 B LEU 129 n 129 LEU 129 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLN 3 A N GLN 3 A O SER 25 A O SER 25 A N LEU 18 A N LEU 18 A O MET 82 A O MET 82 A O GLN 81 A O GLN 81 A N THR 68 A N THR 68 A N GLY 10 A N GLY 10 A O THR 122 A O THR 122 A O THR 119 A O THR 119 A N TYR 93 A N TYR 93 A O TYR 94 A O TYR 94 A N PHE 37 A N PHE 37 A N MET 34 A N MET 34 A O ILE 51 A O ILE 51 A N VAL 50 A N VAL 50 A O ALA 58 A O ALA 58 A N GLY 10 A N GLY 10 A O THR 122 A O THR 122 A O THR 119 A O THR 119 A N TYR 93 A N TYR 93 A N ALA 97 A N ALA 97 A O TYR 114 A O TYR 114 B N ASN 44 B N ASN 44 B O ASP 52 B O ASP 52 B N TYR 53 B N TYR 53 B O ILE 58 B O ILE 58 1 A CG GLN 3 A CG GLN 3 1 Y 1 A CD GLN 3 A CD GLN 3 1 Y 1 A OE1 GLN 3 A OE1 GLN 3 1 Y 1 A NE2 GLN 3 A NE2 GLN 3 1 Y 1 A OE1 GLN 13 A OE1 GLN 13 1 Y 1 A CG LYS 28 A CG LYS 28 1 Y 1 A CD LYS 28 A CD LYS 28 1 Y 1 A CE LYS 28 A CE LYS 28 1 Y 1 A NZ LYS 28 A NZ LYS 28 1 Y 1 A NE ARG 39 A NE ARG 39 1 Y 1 A CZ ARG 39 A CZ ARG 39 1 Y 1 A NH1 ARG 39 A NH1 ARG 39 1 Y 1 A NH2 ARG 39 A NH2 ARG 39 1 Y 1 A CE LYS 43 A CE LYS 43 1 Y 1 A NZ LYS 43 A NZ LYS 43 1 Y 1 A CG GLU 44 A CG GLU 44 1 Y 1 A CD GLU 44 A CD GLU 44 1 Y 1 A OE1 GLU 44 A OE1 GLU 44 1 Y 1 A OE2 GLU 44 A OE2 GLU 44 1 Y 1 A CD LYS 64 A CD LYS 64 1 Y 1 A CE LYS 64 A CE LYS 64 1 Y 1 A NZ LYS 64 A NZ LYS 64 1 Y 1 A CG GLU 88 A CG GLU 88 1 Y 1 A CD GLU 88 A CD GLU 88 1 Y 1 A OE1 GLU 88 A OE1 GLU 88 1 Y 1 A OE2 GLU 88 A OE2 GLU 88 1 Y 1 A CG GLN 117 A CG GLN 117 1 Y 1 A CD GLN 117 A CD GLN 117 1 Y 1 A OE1 GLN 117 A OE1 GLN 117 1 Y 1 A NE2 GLN 117 A NE2 GLN 117 1 Y 1 A OG SER 124 A OG SER 124 1 Y 1 A OG SER 125 A OG SER 125 1 Y 1 B NE ARG 68 B NE ARG 68 1 Y 1 B CZ ARG 68 B CZ ARG 68 1 Y 1 B NH1 ARG 68 B NH1 ARG 68 1 Y 1 B NH2 ARG 68 B NH2 ARG 68 1 Y 1 B CD ARG 73 B CD ARG 73 1 Y 1 B NE ARG 73 B NE ARG 73 1 Y 1 B CZ ARG 73 B CZ ARG 73 1 Y 1 B NH1 ARG 73 B NH1 ARG 73 1 Y 1 B NH2 ARG 73 B NH2 ARG 73 1 Y 1 B CE LYS 97 B CE LYS 97 1 Y 1 B NZ LYS 97 B NZ LYS 97 1 Y 1 B CZ ARG 112 B CZ ARG 112 1 Y 1 B NH1 ARG 112 B NH1 ARG 112 1 Y 1 B NH2 ARG 112 B NH2 ARG 112 1 Y 1 B CG ARG 128 B CG ARG 128 1 Y 1 B CD ARG 128 B CD ARG 128 1 Y 1 B NE ARG 128 B NE ARG 128 1 Y 1 B CZ ARG 128 B CZ ARG 128 1 Y 1 B NH1 ARG 128 B NH1 ARG 128 1 Y 1 B NH2 ARG 128 B NH2 ARG 128 1 Y 1 A ASP 1 A ASP 1 1 Y 1 A ARG 126 A ARG 126 1 Y 1 A GLY 127 A GLY 127 1 Y 1 A ARG 128 A ARG 128 1 Y 1 A HIS 129 A HIS 129 1 Y 1 A HIS 130 A HIS 130 1 Y 1 A HIS 131 A HIS 131 1 Y 1 A HIS 132 A HIS 132 1 Y 1 A HIS 133 A HIS 133 1 Y 1 A HIS 134 A HIS 134 1 Y 1 A ALA 91 174.98 173.37 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP 17.2 -1.21 0.00 0.00 0.90 0.00 0.31 BULK SOLVENT MODEL USED 0.196 0.006 0.173 0.174 0.174 1.85 29.17 1254 25306 24895 5.0 98.3 RANDOM 1680835.14 1680835.14 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT Engh & Huber FLAT MODEL 46.6513 0.40439 0.19 0.17 5.00 0.14 0.06 1.85 29.17 231 2123 6 0 1886 0.014 1.6 25.2 0.92 2.33 1.50 2.96 2.00 3.60 2.00 4.75 2.50 0.253 0.018 0.202 1.97 188 3601 6 5.0 91.7 12.9 1.85 30.0 1RI8 25306 24895 0 0 0.077 0.077 1 16.0 5.9 98.4 0.25 1.85 1.92 5.7 2178 0.25 1 3.6 91.4 refinement CNS 1.1 data reduction DENZO data scaling CCP4 (TRUNCATE) phasing AMoRE camelid ANTIBODY HEAVY CHAIN, Lysozyme C (E.C.3.2.1.17) Crystal Structure of the Camelid Single Domain Antibody 1D2L19 in complex with Hen Egg White Lysozyme 1 N N 2 N N 3 N N 4 N N 4 N N A VAL 73 A VAL 73 HELX_P A LEU 75 A LEU 75 5 1 3 A LYS 86 A LYS 86 HELX_P A THR 90 A THR 90 5 2 5 A ASN 108 A ASN 108 HELX_P A ASN 110 A ASN 110 5 3 3 B GLY 4 B GLY 4 HELX_P B HIS 15 B HIS 15 1 4 12 B ASN 19 B ASN 19 HELX_P B TYR 23 B TYR 23 5 5 5 B SER 24 B SER 24 HELX_P B ASN 37 B ASN 37 1 6 14 B PRO 79 B PRO 79 HELX_P B SER 85 B SER 85 5 7 7 B ILE 88 B ILE 88 HELX_P B SER 100 B SER 100 1 8 13 B ASN 103 B ASN 103 HELX_P B ALA 107 B ALA 107 5 9 5 B TRP 108 B TRP 108 HELX_P B CYS 115 B CYS 115 1 10 8 B ASP 119 B ASP 119 HELX_P B ARG 125 B ARG 125 5 11 7 disulf 2.034 A CYS 22 A SG CYS 22 1_555 A CYS 95 A SG CYS 95 1_555 disulf 2.031 A CYS 33 A SG CYS 33 1_555 A CYS 105 A SG CYS 105 1_555 disulf 2.022 B CYS 6 B SG CYS 6 1_555 B CYS 127 B SG CYS 127 1_555 disulf 2.036 B CYS 30 B SG CYS 30 1_555 B CYS 115 B SG CYS 115 1_555 disulf 2.042 B CYS 64 B SG CYS 64 1_555 B CYS 80 B SG CYS 80 1_555 disulf 2.026 B CYS 76 B SG CYS 76 1_555 B CYS 94 B SG CYS 94 1_555 IMMUNE SYSTEM/HYDROLASE beta sandwich, immunoglobulin fold, VHH-lysozyme complex, alpha-beta orthogonal bundle, IMMUNE SYSTEM-HYDROLASE COMPLEX LYSC_CHICK UNP 2 19 P00698 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL 1RI8 PDB 1 1RI8 19 147 1RI8 1 129 P00698 B 1 1 129 1 134 1RI8 1 134 1RI8 A 2 1 134 4 6 4 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLN 3 A GLN 3 A SER 7 A SER 7 A LEU 18 A LEU 18 A SER 25 A SER 25 A THR 77 A THR 77 A MET 82 A MET 82 A PHE 67 A PHE 67 A ASP 72 A ASP 72 A GLY 10 A GLY 10 A GLN 13 A GLN 13 A THR 119 A THR 119 A SER 124 A SER 124 A ALA 91 A ALA 91 A TRP 99 A TRP 99 A TYR 32 A TYR 32 A ARG 39 A ARG 39 A GLU 46 A GLU 46 A ILE 51 A ILE 51 A THR 57 A THR 57 A TYR 59 A TYR 59 A GLY 10 A GLY 10 A GLN 13 A GLN 13 A THR 119 A THR 119 A SER 124 A SER 124 A ALA 91 A ALA 91 A TRP 99 A TRP 99 A TYR 112 A TYR 112 A TRP 115 A TRP 115 B THR 43 B THR 43 B ARG 45 B ARG 45 B THR 51 B THR 51 B TYR 53 B TYR 53 B ILE 58 B ILE 58 B ASN 59 B ASN 59 BINDING SITE FOR RESIDUE GOL B 1758 Software 9 A ARG 111 A ARG 111 9 1_555 B GLU 35 B GLU 35 9 1_555 B ASP 52 B ASP 52 9 1_555 B GLN 57 B GLN 57 9 1_555 B ASN 59 B ASN 59 9 1_555 B ALA 107 B ALA 107 9 1_555 B VAL 109 B VAL 109 9 1_555 B HOH 1788 E HOH 9 1_555 B HOH 1830 E HOH 9 1_555 19 P 21 21 21