0.019992 0.000000 0.000000 0.000000 0.014628 0.000000 0.000000 0.000000 0.013879 0.00000 0.00000 0.00000 De Genst, E. Silence, K. Ghahroudi, M.A. Decanniere, K. Loris, R. Kinne, J. Wyns, L. Muyldermans, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 50.020 68.360 72.050 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 280 14114 14121 10.1074/jbc.M413011200 15659390 Strong in vivo maturation compensates for structurally restricted H3 loops in antibody repertoires. 2005 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 2002-10-28 MARRESEARCH SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 0.8453 1.0 BW7B EMBL/DESY, Hamburg 0.8453 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B 14902.298 camelid heavy chain antibody VHH DOMAIN, VARIABLE DOMAIN 1 man polymer 14331.160 Lysozyme C 3.2.1.17 1 nat polymer 94.971 PHOSPHATE ION 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 186 nat water 1D2L19 1,4-beta-N-acetylmuramidase C, Allergen Gal d 4, Gal d IV no no EVQLQASGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLY LQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSSRGRHHHHHH EVQLQASGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLY LQMNSLKPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSSRGRHHHHHH A polypeptide(L) no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Arabian camel Camelus Blood Lymphocytes Escherichia sample 9838 Camelus dromedarius 562 Escherichia coli WK6Su plasmid pHEN06 chicken Gallus sample 9031 Gallus gallus egg white 1 2.35 47.25 VAPOR DIFFUSION, HANGING DROP 7.4 PEG 8000, glycerol, ammonium sulphate, potassium phosphate, sodium chloride, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 repository Initial release Version format compliance Non-polymer description Version format compliance 1 0 2005-02-01 1 1 2008-04-29 1 2 2011-07-13 CRYSTAL STRUCTURE OF THE CAMELID SINGLE DOMAIN ANTIBODY 1D2L19 IN COMPLEX WITH HEN EGG WHITE LYSOZYME The sequence of CAMELID heavy chain ANTIBODY (chain A) is not available in any reference sequence database. RCSB Y RCSB 2003-11-19 REL REL PO4 PHOSPHATE ION GOL GLYCEROL HOH water PO4 106 3 PO4 PO4 138 A GOL 1758 4 GOL GOL 1758 B HOH 4 5 HOH HOH 139 A HOH 8 5 HOH HOH 140 A HOH 9 5 HOH HOH 141 A HOH 25 5 HOH HOH 142 A HOH 29 5 HOH HOH 143 A HOH 30 5 HOH HOH 144 A HOH 32 5 HOH HOH 145 A HOH 44 5 HOH HOH 146 A HOH 46 5 HOH HOH 147 A HOH 50 5 HOH HOH 148 A HOH 51 5 HOH HOH 149 A HOH 52 5 HOH HOH 150 A HOH 54 5 HOH HOH 151 A HOH 58 5 HOH HOH 152 A HOH 61 5 HOH HOH 153 A HOH 72 5 HOH HOH 154 A HOH 80 5 HOH HOH 155 A HOH 82 5 HOH HOH 156 A HOH 83 5 HOH HOH 157 A HOH 85 5 HOH HOH 158 A HOH 87 5 HOH HOH 159 A HOH 91 5 HOH HOH 160 A HOH 92 5 HOH HOH 161 A HOH 93 5 HOH HOH 162 A HOH 95 5 HOH HOH 163 A HOH 97 5 HOH HOH 164 A HOH 98 5 HOH HOH 165 A HOH 99 5 HOH HOH 166 A HOH 100 5 HOH HOH 167 A HOH 105 5 HOH HOH 168 A HOH 116 5 HOH HOH 169 A HOH 119 5 HOH HOH 170 A HOH 120 5 HOH HOH 171 A HOH 124 5 HOH HOH 172 A HOH 131 5 HOH HOH 173 A HOH 133 5 HOH HOH 174 A HOH 134 5 HOH HOH 175 A HOH 137 5 HOH HOH 176 A HOH 140 5 HOH HOH 177 A HOH 141 5 HOH HOH 178 A HOH 146 5 HOH HOH 179 A HOH 147 5 HOH HOH 180 A HOH 150 5 HOH HOH 181 A HOH 151 5 HOH HOH 182 A HOH 155 5 HOH HOH 183 A HOH 159 5 HOH HOH 184 A HOH 160 5 HOH HOH 185 A HOH 164 5 HOH HOH 186 A HOH 165 5 HOH HOH 187 A HOH 167 5 HOH HOH 188 A HOH 174 5 HOH HOH 189 A HOH 175 5 HOH HOH 190 A HOH 176 5 HOH HOH 191 A HOH 177 5 HOH HOH 192 A HOH 178 5 HOH HOH 193 A HOH 185 5 HOH HOH 194 A HOH 193 5 HOH HOH 195 A HOH 194 5 HOH HOH 196 A HOH 195 5 HOH HOH 197 A HOH 196 5 HOH HOH 198 A HOH 200 5 HOH HOH 199 A HOH 203 5 HOH HOH 200 A HOH 209 5 HOH HOH 201 A HOH 211 5 HOH HOH 202 A HOH 212 5 HOH HOH 203 A HOH 222 5 HOH HOH 204 A HOH 230 5 HOH HOH 205 A HOH 233 5 HOH HOH 206 A HOH 234 5 HOH HOH 207 A HOH 235 5 HOH HOH 208 A HOH 245 5 HOH HOH 209 A HOH 248 5 HOH HOH 210 A HOH 255 5 HOH HOH 211 A HOH 261 5 HOH HOH 212 A HOH 262 5 HOH HOH 213 A HOH 286 5 HOH HOH 214 A HOH 1 5 HOH HOH 1759 B HOH 2 5 HOH HOH 1760 B HOH 3 5 HOH HOH 1761 B HOH 5 5 HOH HOH 1762 B HOH 6 5 HOH HOH 1763 B HOH 7 5 HOH HOH 1764 B HOH 10 5 HOH HOH 1765 B HOH 11 5 HOH HOH 1766 B HOH 12 5 HOH HOH 1767 B HOH 13 5 HOH HOH 1768 B HOH 14 5 HOH HOH 1769 B HOH 15 5 HOH HOH 1770 B HOH 16 5 HOH HOH 1771 B HOH 17 5 HOH HOH 1772 B HOH 18 5 HOH HOH 1773 B HOH 19 5 HOH HOH 1774 B HOH 20 5 HOH HOH 1775 B HOH 21 5 HOH HOH 1776 B HOH 22 5 HOH HOH 1777 B HOH 23 5 HOH HOH 1778 B HOH 24 5 HOH HOH 1779 B HOH 27 5 HOH HOH 1780 B HOH 28 5 HOH HOH 1781 B HOH 31 5 HOH HOH 1782 B HOH 33 5 HOH HOH 1783 B HOH 34 5 HOH HOH 1784 B HOH 35 5 HOH HOH 1785 B HOH 36 5 HOH HOH 1786 B HOH 37 5 HOH HOH 1787 B HOH 38 5 HOH HOH 1788 B HOH 39 5 HOH HOH 1789 B HOH 40 5 HOH HOH 1790 B HOH 41 5 HOH HOH 1791 B HOH 42 5 HOH HOH 1792 B HOH 43 5 HOH HOH 1793 B HOH 45 5 HOH HOH 1794 B HOH 47 5 HOH HOH 1795 B HOH 48 5 HOH HOH 1796 B HOH 49 5 HOH HOH 1797 B HOH 53 5 HOH HOH 1798 B HOH 55 5 HOH HOH 1799 B HOH 56 5 HOH HOH 1800 B HOH 57 5 HOH HOH 1801 B HOH 59 5 HOH HOH 1802 B HOH 60 5 HOH HOH 1803 B HOH 63 5 HOH HOH 1804 B HOH 64 5 HOH HOH 1805 B HOH 65 5 HOH HOH 1806 B HOH 66 5 HOH HOH 1807 B HOH 67 5 HOH HOH 1808 B HOH 68 5 HOH HOH 1809 B HOH 69 5 HOH HOH 1810 B HOH 70 5 HOH HOH 1811 B HOH 71 5 HOH HOH 1812 B HOH 73 5 HOH HOH 1813 B HOH 75 5 HOH HOH 1814 B HOH 76 5 HOH HOH 1815 B HOH 77 5 HOH HOH 1816 B HOH 78 5 HOH HOH 1817 B HOH 79 5 HOH HOH 1818 B HOH 81 5 HOH HOH 1819 B HOH 84 5 HOH HOH 1820 B HOH 86 5 HOH HOH 1821 B HOH 88 5 HOH HOH 1822 B HOH 89 5 HOH HOH 1823 B HOH 90 5 HOH HOH 1824 B HOH 94 5 HOH HOH 1825 B HOH 96 5 HOH HOH 1826 B HOH 101 5 HOH HOH 1827 B HOH 102 5 HOH HOH 1828 B HOH 103 5 HOH HOH 1829 B HOH 104 5 HOH HOH 1830 B HOH 108 5 HOH HOH 1831 B HOH 109 5 HOH HOH 1832 B HOH 110 5 HOH HOH 1833 B HOH 111 5 HOH HOH 1834 B HOH 112 5 HOH HOH 1835 B HOH 113 5 HOH HOH 1836 B HOH 114 5 HOH HOH 1837 B HOH 115 5 HOH HOH 1838 B HOH 118 5 HOH HOH 1839 B HOH 121 5 HOH HOH 1840 B HOH 123 5 HOH HOH 1841 B HOH 125 5 HOH HOH 1842 B HOH 126 5 HOH HOH 1843 B HOH 128 5 HOH HOH 1844 B HOH 129 5 HOH HOH 1845 B HOH 132 5 HOH HOH 1846 B HOH 142 5 HOH HOH 1847 B HOH 143 5 HOH HOH 1848 B HOH 144 5 HOH HOH 1849 B HOH 149 5 HOH HOH 1850 B HOH 152 5 HOH HOH 1851 B HOH 161 5 HOH HOH 1852 B HOH 171 5 HOH HOH 1853 B HOH 188 5 HOH HOH 1854 B HOH 191 5 HOH HOH 1855 B HOH 192 5 HOH HOH 1856 B HOH 197 5 HOH HOH 1857 B HOH 201 5 HOH HOH 1858 B HOH 202 5 HOH HOH 1859 B HOH 205 5 HOH HOH 1860 B HOH 206 5 HOH HOH 1861 B HOH 210 5 HOH HOH 1862 B HOH 216 5 HOH HOH 1863 B HOH 223 5 HOH HOH 1864 B HOH 237 5 HOH HOH 1865 B HOH 238 5 HOH HOH 1866 B HOH 240 5 HOH HOH 1867 B HOH 265 5 HOH HOH 1868 B n 1 1 A VAL 2 n 2 VAL 2 A GLN 3 n 3 GLN 3 A LEU 4 n 4 LEU 4 A GLN 5 n 5 GLN 5 A ALA 6 n 6 ALA 6 A SER 7 n 7 SER 7 A GLY 8 n 8 GLY 8 A GLY 9 n 9 GLY 9 A GLY 10 n 10 GLY 10 A SER 11 n 11 SER 11 A VAL 12 n 12 VAL 12 A GLN 13 n 13 GLN 13 A ALA 14 n 14 ALA 14 A GLY 15 n 15 GLY 15 A GLN 16 n 16 GLN 16 A SER 17 n 17 SER 17 A LEU 18 n 18 LEU 18 A ARG 19 n 19 ARG 19 A LEU 20 n 20 LEU 20 A SER 21 n 21 SER 21 A CYS 22 n 22 CYS 22 A ALA 23 n 23 ALA 23 A THR 24 n 24 THR 24 A SER 25 n 25 SER 25 A n 26 26 A ALA 27 n 27 ALA 27 A THR 28 n 28 THR 28 A SER 29 n 29 SER 29 A SER 30 n 30 SER 30 A SER 31 n 31 SER 31 A ASN 32 n 32 ASN 32 A CYS 33 n 33 CYS 33 A MET 34 n 34 MET 34 A GLY 35 n 35 GLY 35 A TRP 36 n 36 TRP 36 A PHE 37 n 37 PHE 37 A ARG 38 n 38 ARG 38 A GLN 39 n 39 GLN 39 A ALA 40 n 40 ALA 40 A PRO 41 n 41 PRO 41 A GLY 42 n 42 GLY 42 A LYS 43 n 43 LYS 43 A GLU 44 n 44 GLU 44 A ARG 45 n 45 ARG 45 A GLU 46 n 46 GLU 46 A GLY 47 n 47 GLY 47 A VAL 48 n 48 VAL 48 A ALA 49 n 49 ALA 49 A VAL 50 n 50 VAL 50 A ILE 51 n 51 ILE 51 A ASP 52 n 52 ASP 52 A THR 53 n 53 THR 53 A GLY 54 n 54 GLY 54 A ARG 55 n 55 ARG 55 A GLY 56 n 56 GLY 56 A ASN 57 n 57 ASN 57 A THR 58 n 58 THR 58 A ALA 59 n 59 ALA 59 A TYR 60 n 60 TYR 60 A ALA 61 n 61 ALA 61 A ASP 62 n 62 ASP 62 A SER 63 n 63 SER 63 A VAL 64 n 64 VAL 64 A GLN 65 n 65 GLN 65 A GLY 66 n 66 GLY 66 A ARG 67 n 67 ARG 67 A LEU 68 n 68 LEU 68 A THR 69 n 69 THR 69 A ILE 70 n 70 ILE 70 A SER 71 n 71 SER 71 A LEU 72 n 72 LEU 72 A ASP 73 n 73 ASP 73 A ASN 74 n 74 ASN 74 A n 75 75 A n 76 76 A ASN 77 n 77 ASN 77 A THR 78 n 78 THR 78 A LEU 79 n 79 LEU 79 A TYR 80 n 80 TYR 80 A LEU 81 n 81 LEU 81 A GLN 82 n 82 GLN 82 A MET 83 n 83 MET 83 A ASN 84 n 84 ASN 84 A SER 85 n 85 SER 85 A LEU 86 n 86 LEU 86 A LYS 87 n 87 LYS 87 A PRO 88 n 88 PRO 88 A GLU 89 n 89 GLU 89 A ASP 90 n 90 ASP 90 A THR 91 n 91 THR 91 A ALA 92 n 92 ALA 92 A MET 93 n 93 MET 93 A TYR 94 n 94 TYR 94 A TYR 95 n 95 TYR 95 A CYS 96 n 96 CYS 96 A ALA 97 n 97 ALA 97 A ALA 98 n 98 ALA 98 A ASP 99 n 99 ASP 99 A THR 100 n 100 THR 100 A SER 101 n 101 SER 101 A THR 102 n 102 THR 102 A TRP 103 n 103 TRP 103 A TYR 104 n 104 TYR 104 A ARG 105 n 105 ARG 105 A GLY 106 n 106 GLY 106 A TYR 107 n 107 TYR 107 A CYS 108 n 108 CYS 108 A GLY 109 n 109 GLY 109 A THR 110 n 110 THR 110 A ASN 111 n 111 ASN 111 A PRO 112 n 112 PRO 112 A ASN 113 n 113 ASN 113 A TYR 114 n 114 TYR 114 A PHE 115 n 115 PHE 115 A SER 116 n 116 SER 116 A TYR 117 n 117 TYR 117 A TRP 118 n 118 TRP 118 A GLY 119 n 119 GLY 119 A GLN 120 n 120 GLN 120 A GLY 121 n 121 GLY 121 A THR 122 n 122 THR 122 A GLN 123 n 123 GLN 123 A VAL 124 n 124 VAL 124 A THR 125 n 125 THR 125 A VAL 126 n 126 VAL 126 A SER 127 n 127 SER 127 A n 128 128 A n 129 129 A n 130 130 A n 131 131 A n 132 132 A n 133 133 A n 134 134 A n 135 135 A n 136 136 A n 137 137 A LYS 1 n 1 LYS 1 B VAL 2 n 2 VAL 2 B PHE 3 n 3 PHE 3 B GLY 4 n 4 GLY 4 B ARG 5 n 5 ARG 5 B CYS 6 n 6 CYS 6 B GLU 7 n 7 GLU 7 B LEU 8 n 8 LEU 8 B ALA 9 n 9 ALA 9 B ALA 10 n 10 ALA 10 B ALA 11 n 11 ALA 11 B MET 12 n 12 MET 12 B LYS 13 n 13 LYS 13 B ARG 14 n 14 ARG 14 B HIS 15 n 15 HIS 15 B GLY 16 n 16 GLY 16 B LEU 17 n 17 LEU 17 B ASP 18 n 18 ASP 18 B ASN 19 n 19 ASN 19 B TYR 20 n 20 TYR 20 B ARG 21 n 21 ARG 21 B GLY 22 n 22 GLY 22 B TYR 23 n 23 TYR 23 B SER 24 n 24 SER 24 B LEU 25 n 25 LEU 25 B GLY 26 n 26 GLY 26 B ASN 27 n 27 ASN 27 B TRP 28 n 28 TRP 28 B VAL 29 n 29 VAL 29 B CYS 30 n 30 CYS 30 B ALA 31 n 31 ALA 31 B ALA 32 n 32 ALA 32 B LYS 33 n 33 LYS 33 B PHE 34 n 34 PHE 34 B GLU 35 n 35 GLU 35 B SER 36 n 36 SER 36 B ASN 37 n 37 ASN 37 B PHE 38 n 38 PHE 38 B ASN 39 n 39 ASN 39 B THR 40 n 40 THR 40 B GLN 41 n 41 GLN 41 B ALA 42 n 42 ALA 42 B THR 43 n 43 THR 43 B ASN 44 n 44 ASN 44 B ARG 45 n 45 ARG 45 B ASN 46 n 46 ASN 46 B THR 47 n 47 THR 47 B ASP 48 n 48 ASP 48 B GLY 49 n 49 GLY 49 B SER 50 n 50 SER 50 B THR 51 n 51 THR 51 B ASP 52 n 52 ASP 52 B TYR 53 n 53 TYR 53 B GLY 54 n 54 GLY 54 B ILE 55 n 55 ILE 55 B LEU 56 n 56 LEU 56 B GLN 57 n 57 GLN 57 B ILE 58 n 58 ILE 58 B ASN 59 n 59 ASN 59 B SER 60 n 60 SER 60 B ARG 61 n 61 ARG 61 B TRP 62 n 62 TRP 62 B TRP 63 n 63 TRP 63 B CYS 64 n 64 CYS 64 B ASN 65 n 65 ASN 65 B ASP 66 n 66 ASP 66 B GLY 67 n 67 GLY 67 B ARG 68 n 68 ARG 68 B THR 69 n 69 THR 69 B PRO 70 n 70 PRO 70 B GLY 71 n 71 GLY 71 B SER 72 n 72 SER 72 B ARG 73 n 73 ARG 73 B ASN 74 n 74 ASN 74 B LEU 75 n 75 LEU 75 B CYS 76 n 76 CYS 76 B ASN 77 n 77 ASN 77 B ILE 78 n 78 ILE 78 B PRO 79 n 79 PRO 79 B CYS 80 n 80 CYS 80 B SER 81 n 81 SER 81 B ALA 82 n 82 ALA 82 B LEU 83 n 83 LEU 83 B LEU 84 n 84 LEU 84 B SER 85 n 85 SER 85 B SER 86 n 86 SER 86 B ASP 87 n 87 ASP 87 B ILE 88 n 88 ILE 88 B THR 89 n 89 THR 89 B ALA 90 n 90 ALA 90 B SER 91 n 91 SER 91 B VAL 92 n 92 VAL 92 B ASN 93 n 93 ASN 93 B CYS 94 n 94 CYS 94 B ALA 95 n 95 ALA 95 B LYS 96 n 96 LYS 96 B LYS 97 n 97 LYS 97 B ILE 98 n 98 ILE 98 B VAL 99 n 99 VAL 99 B SER 100 n 100 SER 100 B ASP 101 n 101 ASP 101 B GLY 102 n 102 GLY 102 B ASN 103 n 103 ASN 103 B GLY 104 n 104 GLY 104 B MET 105 n 105 MET 105 B ASN 106 n 106 ASN 106 B ALA 107 n 107 ALA 107 B TRP 108 n 108 TRP 108 B VAL 109 n 109 VAL 109 B ALA 110 n 110 ALA 110 B TRP 111 n 111 TRP 111 B ARG 112 n 112 ARG 112 B ASN 113 n 113 ASN 113 B ARG 114 n 114 ARG 114 B CYS 115 n 115 CYS 115 B LYS 116 n 116 LYS 116 B GLY 117 n 117 GLY 117 B THR 118 n 118 THR 118 B ASP 119 n 119 ASP 119 B VAL 120 n 120 VAL 120 B GLN 121 n 121 GLN 121 B ALA 122 n 122 ALA 122 B TRP 123 n 123 TRP 123 B ILE 124 n 124 ILE 124 B ARG 125 n 125 ARG 125 B GLY 126 n 126 GLY 126 B CYS 127 n 127 CYS 127 B ARG 128 n 128 ARG 128 B LEU 129 n 129 LEU 129 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLY 10 A N GLY 10 A O THR 125 A O THR 125 A O THR 122 A O THR 122 A N TYR 94 A N TYR 94 A O ALA 97 A O ALA 97 A N GLY 35 A N GLY 35 A N ARG 38 A N ARG 38 A O GLU 46 A O GLU 46 A N VAL 50 A N VAL 50 A O ALA 59 A O ALA 59 A N GLY 10 A N GLY 10 A O THR 125 A O THR 125 A O THR 122 A O THR 122 A N TYR 94 A N TYR 94 A N ALA 98 A N ALA 98 A O TYR 117 A O TYR 117 A N LEU 18 A N LEU 18 A O MET 83 A O MET 83 A O THR 78 A O THR 78 A N ASP 73 A N ASP 73 B N ASN 44 B N ASN 44 B O ASP 52 B O ASP 52 B N TYR 53 B N TYR 53 B O ILE 58 B O ILE 58 1 A CG GLN 3 A CG GLN 3 1 Y 1 A CD GLN 3 A CD GLN 3 1 Y 1 A OE1 GLN 3 A OE1 GLN 3 1 Y 1 A NE2 GLN 3 A NE2 GLN 3 1 Y 1 A CG GLN 5 A CG GLN 5 1 Y 1 A CD GLN 5 A CD GLN 5 1 Y 1 A OE1 GLN 5 A OE1 GLN 5 1 Y 1 A NE2 GLN 5 A NE2 GLN 5 1 Y 1 A CD GLN 13 A CD GLN 13 1 Y 1 A OE1 GLN 13 A OE1 GLN 13 1 Y 1 A NE2 GLN 13 A NE2 GLN 13 1 Y 1 A CZ ARG 19 A CZ ARG 19 1 Y 1 A NH1 ARG 19 A NH1 ARG 19 1 Y 1 A NH2 ARG 19 A NH2 ARG 19 1 Y 1 A CB THR 28 A CB THR 28 1 Y 1 A OG1 THR 28 A OG1 THR 28 1 Y 1 A CG2 THR 28 A CG2 THR 28 1 Y 1 A OG SER 29 A OG SER 29 1 Y 1 A CE LYS 43 A CE LYS 43 1 Y 1 A NZ LYS 43 A NZ LYS 43 1 Y 1 A CG GLU 44 A CG GLU 44 1 Y 1 A CD GLU 44 A CD GLU 44 1 Y 1 A OE1 GLU 44 A OE1 GLU 44 1 Y 1 A OE2 GLU 44 A OE2 GLU 44 1 Y 1 A CG GLU 46 A CG GLU 46 1 Y 1 A CD GLU 46 A CD GLU 46 1 Y 1 A OE1 GLU 46 A OE1 GLU 46 1 Y 1 A OE2 GLU 46 A OE2 GLU 46 1 Y 1 A NE ARG 55 A NE ARG 55 1 Y 1 A CZ ARG 55 A CZ ARG 55 1 Y 1 A NH1 ARG 55 A NH1 ARG 55 1 Y 1 A NH2 ARG 55 A NH2 ARG 55 1 Y 1 A CB ASP 73 A CB ASP 73 1 Y 1 A CG ASP 73 A CG ASP 73 1 Y 1 A OD1 ASP 73 A OD1 ASP 73 1 Y 1 A OD2 ASP 73 A OD2 ASP 73 1 Y 1 A CB ASN 74 A CB ASN 74 1 Y 1 A CG ASN 74 A CG ASN 74 1 Y 1 A OD1 ASN 74 A OD1 ASN 74 1 Y 1 A ND2 ASN 74 A ND2 ASN 74 1 Y 1 A CB ASN 77 A CB ASN 77 1 Y 1 A CG ASN 77 A CG ASN 77 1 Y 1 A OD1 ASN 77 A OD1 ASN 77 1 Y 1 A ND2 ASN 77 A ND2 ASN 77 1 Y 1 A CG GLU 89 A CG GLU 89 1 Y 1 A CD GLU 89 A CD GLU 89 1 Y 1 A OE1 GLU 89 A OE1 GLU 89 1 Y 1 A OE2 GLU 89 A OE2 GLU 89 1 Y 1 A CG GLN 120 A CG GLN 120 1 Y 1 A CD GLN 120 A CD GLN 120 1 Y 1 A OE1 GLN 120 A OE1 GLN 120 1 Y 1 A NE2 GLN 120 A NE2 GLN 120 1 Y 1 A CB SER 127 A CB SER 127 1 Y 1 A OG SER 127 A OG SER 127 1 Y 1 B CD ARG 73 B CD ARG 73 1 Y 1 B NE ARG 73 B NE ARG 73 1 Y 1 B CZ ARG 73 B CZ ARG 73 1 Y 1 B NH1 ARG 73 B NH1 ARG 73 1 Y 1 B NH2 ARG 73 B NH2 ARG 73 1 Y 1 B CG ASN 103 B CG ASN 103 1 Y 1 B OD1 ASN 103 B OD1 ASN 103 1 Y 1 B ND2 ASN 103 B ND2 ASN 103 1 Y 1 B CG GLN 121 B CG GLN 121 1 Y 1 B CD GLN 121 B CD GLN 121 1 Y 1 B OE1 GLN 121 B OE1 GLN 121 1 Y 1 B NE2 GLN 121 B NE2 GLN 121 1 Y 1 B CD ARG 125 B CD ARG 125 1 Y 1 B NE ARG 125 B NE ARG 125 1 Y 1 B CZ ARG 125 B CZ ARG 125 1 Y 1 B NH1 ARG 125 B NH1 ARG 125 1 Y 1 B NH2 ARG 125 B NH2 ARG 125 1 Y 1 A GLU 1 A GLU 1 1 Y 1 A GLY 26 A GLY 26 1 Y 1 A ALA 75 A ALA 75 1 Y 1 A LYS 76 A LYS 76 1 Y 1 A SER 128 A SER 128 1 Y 1 A ARG 129 A ARG 129 1 Y 1 A GLY 130 A GLY 130 1 Y 1 A ARG 131 A ARG 131 1 Y 1 A HIS 132 A HIS 132 1 Y 1 A HIS 133 A HIS 133 1 Y 1 A HIS 134 A HIS 134 1 Y 1 A HIS 135 A HIS 135 1 Y 1 A HIS 136 A HIS 136 1 Y 1 A HIS 137 A HIS 137 1 Y 1 11.32 1.10 114.20 125.52 A A A CA CB SG CYS CYS CYS 22 22 22 A A A N 1 18.63 1.10 114.20 132.83 A A A CA CB SG CYS CYS CYS 22 22 22 B B B N 1 18.72 2.20 113.40 132.12 A A A CA CB CG GLN GLN GLN 65 65 65 N 1 7.47 1.10 114.20 121.67 A A A CA CB SG CYS CYS CYS 96 96 96 B B B N 1 A A CA CB CYS CYS 22 22 0.144 0.022 1.535 1.679 B B N 1 A A CA CB GLN GLN 65 65 -0.221 0.022 1.535 1.314 N 1 A A CA CB CYS CYS 96 96 0.201 0.022 1.535 1.736 B B N 1 A ALA 92 172.60 178.74 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP PO4_XPLOR_PARAM PO4_XPLOR_TOP 16.5 -0.92 0.00 0.00 0.50 0.00 0.42 BULK SOLVENT MODEL USED 0.235 0.005 0.22 0.22 0.22 1.40 26.88 2475 49374 48908 5.1 98.9 RANDOM 1381007.94 1381007.94 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT Engh & Huber FLAT MODEL 43.6135 0.379361 0.20 0.18 5.00 0.14 0.11 1.40 26.88 186 2052 11 0 1855 0.008 1.4 25.0 1.04 1.08 1.50 1.68 2.00 1.63 2.00 2.36 2.50 0.287 0.015 0.254 1.49 383 7522 6 4.8 97.3 13.2 1.4 49.4 1RJC 49374 48909 0 0 0.065 0.065 1 21.4 4.5 99.06 0.371 1.4 1.45 3.7 4610 0.371 1 96.8 refinement CNS 1.1 data reduction DENZO data scaling CCP4 (TRUNCATE) phasing AMoRE camelid heavy chain antibody, Lysozyme C (E.C.3.2.1.17) Crystal structure of the camelid single domain antibody cAb-Lys2 in complex with hen egg white lysozyme 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N A LYS 87 A LYS 87 HELX_P A THR 91 A THR 91 5 1 5 A ASN 111 A ASN 111 HELX_P A PHE 115 A PHE 115 5 2 5 B GLY 4 B GLY 4 HELX_P B HIS 15 B HIS 15 1 3 12 B ASN 19 B ASN 19 HELX_P B TYR 23 B TYR 23 5 4 5 B SER 24 B SER 24 HELX_P B ASN 37 B ASN 37 1 5 14 B PRO 79 B PRO 79 HELX_P B SER 85 B SER 85 5 6 7 B ILE 88 B ILE 88 HELX_P B VAL 99 B VAL 99 1 7 12 B ASN 103 B ASN 103 HELX_P B ALA 107 B ALA 107 5 8 5 B TRP 108 B TRP 108 HELX_P B CYS 115 B CYS 115 1 9 8 B ASP 119 B ASP 119 HELX_P B ILE 124 B ILE 124 5 10 6 disulf 2.014 A A A CYS 22 A SG CYS 22 1_555 A CYS 96 A SG CYS 96 1_555 disulf 2.046 B B A CYS 22 A SG CYS 22 1_555 A CYS 96 A SG CYS 96 1_555 disulf 2.027 A CYS 33 A SG CYS 33 1_555 A CYS 108 A SG CYS 108 1_555 disulf 2.033 B CYS 6 B SG CYS 6 1_555 B CYS 127 B SG CYS 127 1_555 disulf 2.040 B CYS 30 B SG CYS 30 1_555 B CYS 115 B SG CYS 115 1_555 disulf 2.031 B CYS 64 B SG CYS 64 1_555 B CYS 80 B SG CYS 80 1_555 disulf 2.027 B CYS 76 B SG CYS 76 1_555 B CYS 94 B SG CYS 94 1_555 IMMUNE SYSTEM/HYDROLASE beta sandwich, immunoglobulin fold, protein-protein hetero complex, alpha-beta orthogonal bundle, IMMUNE SYSTEM-HYDROLASE COMPLEX LYSC_CHICK UNP 2 19 P00698 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL 1RJC PDB 1 1RJC 19 147 1RJC 1 129 P00698 B 1 1 129 1 137 1RJC 1 137 1RJC A 2 1 137 6 4 3 3 parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLY 10 A GLY 10 A GLN 13 A GLN 13 A THR 122 A THR 122 A SER 127 A SER 127 A ALA 92 A ALA 92 A ALA 98 A ALA 98 A CYS 33 A CYS 33 A GLN 39 A GLN 39 A GLU 46 A GLU 46 A ASP 52 A ASP 52 A THR 58 A THR 58 A TYR 60 A TYR 60 A GLY 10 A GLY 10 A GLN 13 A GLN 13 A THR 122 A THR 122 A SER 127 A SER 127 A ALA 92 A ALA 92 A ALA 98 A ALA 98 A TYR 117 A TYR 117 A TRP 118 A TRP 118 A LEU 18 A LEU 18 A ALA 23 A ALA 23 A THR 78 A THR 78 A MET 83 A MET 83 A LEU 68 A LEU 68 A ASP 73 A ASP 73 B THR 43 B THR 43 B ARG 45 B ARG 45 B THR 51 B THR 51 B TYR 53 B TYR 53 B ILE 58 B ILE 58 B ASN 59 B ASN 59 BINDING SITE FOR RESIDUE PO4 A 138 Software 6 BINDING SITE FOR RESIDUE GOL B 1758 Software 5 A GLN 65 A GLN 65 6 1_555 A HOH 145 E HOH 6 1_555 A HOH 164 E HOH 6 1_555 A HOH 170 E HOH 6 1_555 B ARG 14 B ARG 14 6 3_745 B HIS 15 B HIS 15 6 3_745 A HOH 163 E HOH 5 3_655 A HOH 194 E HOH 5 3_655 B TRP 123 B TRP 123 5 1_555 B HOH 1815 F HOH 5 1_555 B HOH 1827 F HOH 5 1_555 19 P 21 21 21