0.035651 0.007988 0.005314 0.000000 0.028317 0.005613 0.000000 0.000000 0.014701 0.00000 0.00000 0.00000 Nakagawa, A. Hosaka, H. Nakashima, T. Tanaka, I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 99.58 95.86 102.63 28.050 36.190 69.710 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N O N 235 N C N 236 N C N 237 N SE N 238 N C N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub N 322 N sing Y 323 N doub N 324 N sing Y 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing UK EMBO J. EMJODG 0897 0261-4189 18 1459 1467 10.1093/emboj/18.6.1459 10075918 The three-dimensional structure of the RNA-binding domain of ribosomal protein L2; a protein at the peptidyl transferase center of the ribosome. 1999 US J.Struct.Biol. JSBIEM 0803 1047-8477 124 99 101 Crystallization and preliminary X-ray crystallographic study of a 23S rRNA binding domain of the ribosomal protein L2 from Bacillus stearothermophilus 1998 10.2210/pdb1rl2/pdb pdb_00001rl2 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 FOCUSING MIRRORS IMAGE PLATE 1998-05-15 RIGAKU SI(111) MAD M x-ray 1 0.9000 1.0 0.9785 1.0 0.9788 1.0 BL-18B Photon Factory 0.9000, 0.9785, 0.9788 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-18B 14930.819 PROTEIN (RIBOSOMAL PROTEIN L2) METHIONINES ARE SUBSTITUED BY SELONOMETHIONINE 2 man polymer 18.015 water 109 nat water no yes QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVG(MSE)EI(MSE)SGPDADIKIGNALPL ENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVR(MSE)ILGKCRATVGEVGN QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTL VHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEVGN A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Geobacillus Escherichia sample 1422 Geobacillus stearothermophilus L2 562 Escherichia coli BL21(DE3)LYSS PLASMID PET-22B 1 2.18 43 DATA WERE COLLECTED USING THE WEISSENBERG METHOD 6.5 PROTEIN WAS CRYSTALLIZED FROM 15% PEK20000 IN 0.1M MES PH6, pH 6.5 PEK20000 1 MES 1 citation_author chem_comp_atom chem_comp_bond database_2 struct_conn repository Initial release Version format compliance Version format compliance Database references Data collection Database references Derived calculations 1 0 1999-04-02 1 1 2008-04-26 1 2 2011-07-13 1 3 2018-01-24 1 4 2023-12-27 _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag BNL Y RCSB 1999-03-25 REL HOH water HOH 1 2 HOH HOH 197 A HOH 2 2 HOH HOH 198 A HOH 3 2 HOH HOH 199 A HOH 4 2 HOH HOH 200 A HOH 5 2 HOH HOH 201 A HOH 6 2 HOH HOH 202 A HOH 7 2 HOH HOH 203 A HOH 8 2 HOH HOH 204 A HOH 9 2 HOH HOH 205 A HOH 10 2 HOH HOH 206 A HOH 11 2 HOH HOH 207 A HOH 12 2 HOH HOH 208 A HOH 13 2 HOH HOH 209 A HOH 14 2 HOH HOH 210 A HOH 15 2 HOH HOH 211 A HOH 16 2 HOH HOH 212 A HOH 17 2 HOH HOH 213 A HOH 18 2 HOH HOH 214 A HOH 19 2 HOH HOH 215 A HOH 20 2 HOH HOH 216 A HOH 21 2 HOH HOH 217 A HOH 22 2 HOH HOH 218 A HOH 23 2 HOH HOH 219 A HOH 24 2 HOH HOH 220 A HOH 25 2 HOH HOH 221 A HOH 26 2 HOH HOH 222 A HOH 27 2 HOH HOH 223 A HOH 28 2 HOH HOH 224 A HOH 29 2 HOH HOH 225 A HOH 30 2 HOH HOH 226 A HOH 31 2 HOH HOH 227 A HOH 32 2 HOH HOH 228 A HOH 33 2 HOH HOH 229 A HOH 34 2 HOH HOH 230 A HOH 35 2 HOH HOH 231 A HOH 36 2 HOH HOH 232 A HOH 37 2 HOH HOH 233 A HOH 38 2 HOH HOH 234 A HOH 39 2 HOH HOH 235 A HOH 40 2 HOH HOH 236 A HOH 41 2 HOH HOH 237 A HOH 42 2 HOH HOH 238 A HOH 43 2 HOH HOH 239 A HOH 44 2 HOH HOH 240 A HOH 45 2 HOH HOH 241 A HOH 46 2 HOH HOH 242 A HOH 47 2 HOH HOH 243 A HOH 48 2 HOH HOH 244 A HOH 49 2 HOH HOH 245 A HOH 50 2 HOH HOH 246 A HOH 51 2 HOH HOH 247 A HOH 52 2 HOH HOH 248 A HOH 53 2 HOH HOH 249 A HOH 54 2 HOH HOH 250 A HOH 55 2 HOH HOH 251 A HOH 56 2 HOH HOH 252 A HOH 57 2 HOH HOH 253 A HOH 58 2 HOH HOH 254 A HOH 59 2 HOH HOH 255 A HOH 60 2 HOH HOH 256 A HOH 61 2 HOH HOH 257 A HOH 62 2 HOH HOH 258 A HOH 63 2 HOH HOH 259 A HOH 64 2 HOH HOH 260 A HOH 65 2 HOH HOH 261 A HOH 71 2 HOH HOH 262 A HOH 66 2 HOH HOH 197 B HOH 67 2 HOH HOH 198 B HOH 68 2 HOH HOH 199 B HOH 69 2 HOH HOH 200 B HOH 70 2 HOH HOH 201 B HOH 72 2 HOH HOH 202 B HOH 73 2 HOH HOH 203 B HOH 74 2 HOH HOH 204 B HOH 75 2 HOH HOH 205 B HOH 76 2 HOH HOH 206 B HOH 77 2 HOH HOH 207 B HOH 78 2 HOH HOH 208 B HOH 79 2 HOH HOH 209 B HOH 80 2 HOH HOH 210 B HOH 81 2 HOH HOH 211 B HOH 82 2 HOH HOH 212 B HOH 83 2 HOH HOH 213 B HOH 84 2 HOH HOH 214 B HOH 85 2 HOH HOH 215 B HOH 86 2 HOH HOH 216 B HOH 87 2 HOH HOH 217 B HOH 88 2 HOH HOH 218 B HOH 89 2 HOH HOH 219 B HOH 90 2 HOH HOH 220 B HOH 91 2 HOH HOH 221 B HOH 92 2 HOH HOH 222 B HOH 93 2 HOH HOH 223 B HOH 94 2 HOH HOH 224 B HOH 95 2 HOH HOH 225 B HOH 96 2 HOH HOH 226 B HOH 97 2 HOH HOH 227 B HOH 98 2 HOH HOH 228 B HOH 99 2 HOH HOH 229 B HOH 100 2 HOH HOH 230 B HOH 101 2 HOH HOH 231 B HOH 102 2 HOH HOH 232 B HOH 103 2 HOH HOH 233 B HOH 104 2 HOH HOH 234 B HOH 105 2 HOH HOH 235 B HOH 106 2 HOH HOH 236 B HOH 107 2 HOH HOH 237 B HOH 108 2 HOH HOH 238 B HOH 109 2 HOH HOH 239 B GLN 60 n 1 GLN 60 A TYR 61 n 2 TYR 61 A ARG 62 n 3 ARG 62 A ILE 63 n 4 ILE 63 A ILE 64 n 5 ILE 64 A ASP 65 n 6 ASP 65 A PHE 66 n 7 PHE 66 A LYS 67 n 8 LYS 67 A ARG 68 n 9 ARG 68 A ASP 69 n 10 ASP 69 A LYS 70 n 11 LYS 70 A ASP 71 n 12 ASP 71 A GLY 72 n 13 GLY 72 A ILE 73 n 14 ILE 73 A PRO 74 n 15 PRO 74 A GLY 75 n 16 GLY 75 A ARG 76 n 17 ARG 76 A VAL 77 n 18 VAL 77 A ALA 78 n 19 ALA 78 A THR 79 n 20 THR 79 A ILE 80 n 21 ILE 80 A GLU 81 n 22 GLU 81 A TYR 82 n 23 TYR 82 A ASP 83 n 24 ASP 83 A PRO 84 n 25 PRO 84 A ASN 85 n 26 ASN 85 A ARG 86 n 27 ARG 86 A SER 87 n 28 SER 87 A ALA 88 n 29 ALA 88 A ASN 89 n 30 ASN 89 A ILE 90 n 31 ILE 90 A ALA 91 n 32 ALA 91 A LEU 92 n 33 LEU 92 A ILE 93 n 34 ILE 93 A ASN 94 n 35 ASN 94 A TYR 95 n 36 TYR 95 A ALA 96 n 37 ALA 96 A ASP 97 n 38 ASP 97 A GLY 98 n 39 GLY 98 A GLU 99 n 40 GLU 99 A LYS 100 n 41 LYS 100 A ARG 101 n 42 ARG 101 A TYR 102 n 43 TYR 102 A ILE 103 n 44 ILE 103 A ILE 104 n 45 ILE 104 A ALA 105 n 46 ALA 105 A PRO 106 n 47 PRO 106 A LYS 107 n 48 LYS 107 A ASN 108 n 49 ASN 108 A LEU 109 n 50 LEU 109 A LYS 110 n 51 LYS 110 A VAL 111 n 52 VAL 111 A GLY 112 n 53 GLY 112 A MSE 113 n 54 MSE 113 A GLU 114 n 55 GLU 114 A ILE 115 n 56 ILE 115 A MSE 116 n 57 MSE 116 A SER 117 n 58 SER 117 A GLY 118 n 59 GLY 118 A PRO 119 n 60 PRO 119 A ASP 120 n 61 ASP 120 A ALA 121 n 62 ALA 121 A ASP 122 n 63 ASP 122 A ILE 123 n 64 ILE 123 A LYS 124 n 65 LYS 124 A ILE 125 n 66 ILE 125 A GLY 126 n 67 GLY 126 A ASN 127 n 68 ASN 127 A ALA 128 n 69 ALA 128 A LEU 129 n 70 LEU 129 A PRO 130 n 71 PRO 130 A LEU 131 n 72 LEU 131 A GLU 132 n 73 GLU 132 A ASN 133 n 74 ASN 133 A ILE 134 n 75 ILE 134 A PRO 135 n 76 PRO 135 A VAL 136 n 77 VAL 136 A GLY 137 n 78 GLY 137 A THR 138 n 79 THR 138 A LEU 139 n 80 LEU 139 A VAL 140 n 81 VAL 140 A HIS 141 n 82 HIS 141 A ASN 142 n 83 ASN 142 A ILE 143 n 84 ILE 143 A GLU 144 n 85 GLU 144 A LEU 145 n 86 LEU 145 A LYS 146 n 87 LYS 146 A PRO 147 n 88 PRO 147 A GLY 148 n 89 GLY 148 A ARG 149 n 90 ARG 149 A GLY 150 n 91 GLY 150 A GLY 151 n 92 GLY 151 A GLN 152 n 93 GLN 152 A LEU 153 n 94 LEU 153 A VAL 154 n 95 VAL 154 A ARG 155 n 96 ARG 155 A ALA 156 n 97 ALA 156 A ALA 157 n 98 ALA 157 A GLY 158 n 99 GLY 158 A THR 159 n 100 THR 159 A SER 160 n 101 SER 160 A ALA 161 n 102 ALA 161 A GLN 162 n 103 GLN 162 A VAL 163 n 104 VAL 163 A LEU 164 n 105 LEU 164 A GLY 165 n 106 GLY 165 A LYS 166 n 107 LYS 166 A GLU 167 n 108 GLU 167 A GLY 168 n 109 GLY 168 A LYS 169 n 110 LYS 169 A TYR 170 n 111 TYR 170 A VAL 171 n 112 VAL 171 A ILE 172 n 113 ILE 172 A VAL 173 n 114 VAL 173 A ARG 174 n 115 ARG 174 A LEU 175 n 116 LEU 175 A ALA 176 n 117 ALA 176 A SER 177 n 118 SER 177 A GLY 178 n 119 GLY 178 A GLU 179 n 120 GLU 179 A VAL 180 n 121 VAL 180 A ARG 181 n 122 ARG 181 A MSE 182 n 123 MSE 182 A ILE 183 n 124 ILE 183 A LEU 184 n 125 LEU 184 A GLY 185 n 126 GLY 185 A LYS 186 n 127 LYS 186 A CYS 187 n 128 CYS 187 A ARG 188 n 129 ARG 188 A ALA 189 n 130 ALA 189 A THR 190 n 131 THR 190 A VAL 191 n 132 VAL 191 A GLY 192 n 133 GLY 192 A GLU 193 n 134 GLU 193 A VAL 194 n 135 VAL 194 A GLY 195 n 136 GLY 195 A n 137 196 A GLN 60 n 1 GLN 60 B TYR 61 n 2 TYR 61 B ARG 62 n 3 ARG 62 B ILE 63 n 4 ILE 63 B ILE 64 n 5 ILE 64 B ASP 65 n 6 ASP 65 B PHE 66 n 7 PHE 66 B LYS 67 n 8 LYS 67 B ARG 68 n 9 ARG 68 B ASP 69 n 10 ASP 69 B LYS 70 n 11 LYS 70 B ASP 71 n 12 ASP 71 B GLY 72 n 13 GLY 72 B ILE 73 n 14 ILE 73 B PRO 74 n 15 PRO 74 B GLY 75 n 16 GLY 75 B ARG 76 n 17 ARG 76 B VAL 77 n 18 VAL 77 B ALA 78 n 19 ALA 78 B THR 79 n 20 THR 79 B ILE 80 n 21 ILE 80 B GLU 81 n 22 GLU 81 B TYR 82 n 23 TYR 82 B ASP 83 n 24 ASP 83 B PRO 84 n 25 PRO 84 B ASN 85 n 26 ASN 85 B ARG 86 n 27 ARG 86 B SER 87 n 28 SER 87 B ALA 88 n 29 ALA 88 B ASN 89 n 30 ASN 89 B ILE 90 n 31 ILE 90 B ALA 91 n 32 ALA 91 B LEU 92 n 33 LEU 92 B ILE 93 n 34 ILE 93 B ASN 94 n 35 ASN 94 B TYR 95 n 36 TYR 95 B ALA 96 n 37 ALA 96 B ASP 97 n 38 ASP 97 B GLY 98 n 39 GLY 98 B GLU 99 n 40 GLU 99 B LYS 100 n 41 LYS 100 B ARG 101 n 42 ARG 101 B TYR 102 n 43 TYR 102 B ILE 103 n 44 ILE 103 B ILE 104 n 45 ILE 104 B ALA 105 n 46 ALA 105 B PRO 106 n 47 PRO 106 B LYS 107 n 48 LYS 107 B ASN 108 n 49 ASN 108 B LEU 109 n 50 LEU 109 B LYS 110 n 51 LYS 110 B VAL 111 n 52 VAL 111 B GLY 112 n 53 GLY 112 B MSE 113 n 54 MSE 113 B GLU 114 n 55 GLU 114 B ILE 115 n 56 ILE 115 B MSE 116 n 57 MSE 116 B SER 117 n 58 SER 117 B GLY 118 n 59 GLY 118 B PRO 119 n 60 PRO 119 B ASP 120 n 61 ASP 120 B ALA 121 n 62 ALA 121 B ASP 122 n 63 ASP 122 B ILE 123 n 64 ILE 123 B LYS 124 n 65 LYS 124 B ILE 125 n 66 ILE 125 B GLY 126 n 67 GLY 126 B ASN 127 n 68 ASN 127 B ALA 128 n 69 ALA 128 B LEU 129 n 70 LEU 129 B PRO 130 n 71 PRO 130 B LEU 131 n 72 LEU 131 B GLU 132 n 73 GLU 132 B ASN 133 n 74 ASN 133 B ILE 134 n 75 ILE 134 B PRO 135 n 76 PRO 135 B VAL 136 n 77 VAL 136 B GLY 137 n 78 GLY 137 B THR 138 n 79 THR 138 B LEU 139 n 80 LEU 139 B VAL 140 n 81 VAL 140 B HIS 141 n 82 HIS 141 B ASN 142 n 83 ASN 142 B ILE 143 n 84 ILE 143 B GLU 144 n 85 GLU 144 B LEU 145 n 86 LEU 145 B LYS 146 n 87 LYS 146 B PRO 147 n 88 PRO 147 B GLY 148 n 89 GLY 148 B ARG 149 n 90 ARG 149 B GLY 150 n 91 GLY 150 B GLY 151 n 92 GLY 151 B GLN 152 n 93 GLN 152 B LEU 153 n 94 LEU 153 B VAL 154 n 95 VAL 154 B ARG 155 n 96 ARG 155 B ALA 156 n 97 ALA 156 B ALA 157 n 98 ALA 157 B GLY 158 n 99 GLY 158 B THR 159 n 100 THR 159 B SER 160 n 101 SER 160 B ALA 161 n 102 ALA 161 B GLN 162 n 103 GLN 162 B VAL 163 n 104 VAL 163 B LEU 164 n 105 LEU 164 B GLY 165 n 106 GLY 165 B LYS 166 n 107 LYS 166 B GLU 167 n 108 GLU 167 B GLY 168 n 109 GLY 168 B LYS 169 n 110 LYS 169 B TYR 170 n 111 TYR 170 B VAL 171 n 112 VAL 171 B ILE 172 n 113 ILE 172 B VAL 173 n 114 VAL 173 B ARG 174 n 115 ARG 174 B LEU 175 n 116 LEU 175 B ALA 176 n 117 ALA 176 B SER 177 n 118 SER 177 B GLY 178 n 119 GLY 178 B GLU 179 n 120 GLU 179 B VAL 180 n 121 VAL 180 B ARG 181 n 122 ARG 181 B MSE 182 n 123 MSE 182 B ILE 183 n 124 ILE 183 B LEU 184 n 125 LEU 184 B GLY 185 n 126 GLY 185 B LYS 186 n 127 LYS 186 B CYS 187 n 128 CYS 187 B ARG 188 n 129 ARG 188 B ALA 189 n 130 ALA 189 B THR 190 n 131 THR 190 B VAL 191 n 132 VAL 191 B GLY 192 n 133 GLY 192 B GLU 193 n 134 GLU 193 B VAL 194 n 135 VAL 194 B GLY 195 n 136 GLY 195 B ASN 196 n 137 ASN 196 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric A MSE 113 SELENOMETHIONINE A MSE 54 MET A MSE 116 SELENOMETHIONINE A MSE 57 MET A MSE 182 SELENOMETHIONINE A MSE 123 MET B MSE 113 SELENOMETHIONINE B MSE 54 MET B MSE 116 SELENOMETHIONINE B MSE 57 MET B MSE 182 SELENOMETHIONINE B MSE 123 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 101 A O ARG 42 A N ILE 93 A N ILE 34 A O ALA 88 A O ALA 29 A N ASP 83 A N ASP 24 A O LEU 129 A O LEU 70 A N ALA 189 A N ALA 130 A O GLN 162 A O GLN 103 A N ARG 174 A N ARG 115 B O ARG 101 B O ARG 42 B N ILE 93 B N ILE 34 B O ALA 88 B O ALA 29 B N ASP 83 B N ASP 24 B O LEU 129 B O LEU 70 B N ALA 189 B N ALA 130 B O GLN 162 B O GLN 103 B N ARG 174 B N ARG 115 1 A ASN 196 A ASN 137 1 Y 1 A LYS 70 -93.02 57.25 1 A PRO 147 -33.64 91.29 1 A ARG 149 -58.23 -0.51 1 A VAL 154 38.39 67.73 1 A VAL 194 -109.63 -142.57 1 B TYR 61 -30.83 111.10 1 B ALA 156 -165.46 -87.66 1 B VAL 194 -63.13 95.47 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 29.7 -4.11 4.40 -2.89 12.94 -5.80 -8.83 0.2580000 0.008 0.2030000 2.3 20 1117 11415 11415 9.8 98.6 RANDOM 1 RESTRAINED THROUGHOUT 0.0 MAD FLAT MODEL 46.4 0.36 0.36 0.27 5 0.41 0.30 2.3 20 109 2173 0 0 2064 0.011 1.6 26.1 1.03 2.20 1.50 3.47 2.00 3.57 2.00 4.87 2.50 1 RESTRAINTS 1 X-RAY DIFFRACTION 0.094 0.369 0.2 5 2 2 X-RAY DIFFRACTION 0.099 0.331 0.2 5 3 3 X-RAY DIFFRACTION 0.131 0.289 0.2 5 4 4 X-RAY DIFFRACTION 0.087 0.221 0.2 5 0.3240000 0.024 0.2580000 2.44 184 1668 6 9.9 97.5 15.0 2.3 40.0 1RL2 11430 0.0840000 1 8.3 3.9 98.6 0.3540000 2.3 2.42 2.1 3.9 96.8 phasing SHARP phasing SOLOMON refinement CNS 0.5 data reduction DENZO data scaling CCP4 (SCALA) RIBOSOMAL PROTEIN L2 RNA-BINDING DOMAIN FROM BACILLUS STEAROTHERMOPHILUS 1 N N 1 N N 2 N N 2 N N A PRO 84 A PRO 25 HELX_P A ARG 86 A ARG 27 5 1 3 A LEU 131 A LEU 72 HELX_P A ASN 133 A ASN 74 5 2 3 B LEU 131 B LEU 72 HELX_P B ASN 133 B ASN 74 5 3 3 covale 1.330 both A GLY 112 A C GLY 53 1_555 A MSE 113 A N MSE 54 1_555 covale 1.332 both A MSE 113 A C MSE 54 1_555 A GLU 114 A N GLU 55 1_555 covale 1.327 both A ILE 115 A C ILE 56 1_555 A MSE 116 A N MSE 57 1_555 covale 1.327 both A MSE 116 A C MSE 57 1_555 A SER 117 A N SER 58 1_555 covale 1.325 both A ARG 181 A C ARG 122 1_555 A MSE 182 A N MSE 123 1_555 covale 1.325 both A MSE 182 A C MSE 123 1_555 A ILE 183 A N ILE 124 1_555 covale 1.325 both B GLY 112 B C GLY 53 1_555 B MSE 113 B N MSE 54 1_555 covale 1.326 both B MSE 113 B C MSE 54 1_555 B GLU 114 B N GLU 55 1_555 covale 1.327 both B ILE 115 B C ILE 56 1_555 B MSE 116 B N MSE 57 1_555 covale 1.327 both B MSE 116 B C MSE 57 1_555 B SER 117 B N SER 58 1_555 covale 1.329 both B ARG 181 B C ARG 122 1_555 B MSE 182 B N MSE 123 1_555 covale 1.329 both B MSE 182 B C MSE 123 1_555 B ILE 183 B N ILE 124 1_555 RIBOSOMAL PROTEIN RIBOSOMAL PROTEIN, RNA-BINDING DOMAIN, PEPTIDYLTRANSFEREASE CENTER given -0.999427 -0.006932 0.033133 -0.014974 0.968367 -0.249082 -0.030359 -0.249436 -0.967915 -16.31700 -18.99300 27.64900 RL2_BACST UNP 1 P04257 60 196 1RL2 60 196 P04257 A 1 1 137 60 196 1RL2 60 196 P04257 B 1 1 137 3 2 2 3 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 100 A LYS 41 A ILE 104 A ILE 45 A ALA 88 A ALA 29 A TYR 95 A TYR 36 A GLY 75 A GLY 16 A ASP 83 A ASP 24 A ALA 128 A ALA 69 A PRO 130 A PRO 71 A ARG 188 A ARG 129 A THR 190 A THR 131 A GLN 162 A GLN 103 A GLU 167 A GLU 108 A TYR 170 A TYR 111 A ARG 174 A ARG 115 B LYS 100 B LYS 41 B ILE 104 B ILE 45 B ALA 88 B ALA 29 B TYR 95 B TYR 36 B GLY 75 B GLY 16 B ASP 83 B ASP 24 B ALA 128 B ALA 69 B PRO 130 B PRO 71 B ARG 188 B ARG 129 B THR 190 B THR 131 B GLN 162 B GLN 103 B GLU 167 B GLU 108 B TYR 170 B TYR 111 B ARG 174 B ARG 115 1 triclinic P 1