0.026455
0.000000
0.000000
0.000000
0.009158
0.000000
0.000000
0.000000
0.008425
0.00000
0.00000
0.00000
Zhao, Y.
Ke, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
37.800
109.200
118.700
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H6 N2 O2
138.124
4-NITROANILINE
PARANITROANILINE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H6 O4
118.088
SUCCINIC ACID
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
35
7356
7361
10.1021/bi9602775
8652511
Crystal structure implies that cyclophilin predominantly catalyzes the trans to cis isomerization.
1996
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
17905.307
CYCLOPHILIN A
2
man
polymer
624.641
AAPF PEPTIDE SUBSTRATE
2
man
polymer
18.015
water
38
nat
water
no
no
VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGE
KFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC
GQLE
VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGE
KFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC
GQLE
A,B
polypeptide(L)
no
yes
(SIN)AAPF(NIT)
XAAPFX
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
T CELL
CYCLOPHILIN
9606
Homo sapiens
3.30
62.77
pdbx_database_status
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Derived calculations
Other
1
0
1996-10-14
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1995-07-31
REL
HOH
water
HOH
1
3
HOH
HOH
166
A
HOH
3
3
HOH
HOH
167
A
HOH
7
3
HOH
HOH
168
A
HOH
8
3
HOH
HOH
169
A
HOH
9
3
HOH
HOH
170
A
HOH
12
3
HOH
HOH
171
A
HOH
14
3
HOH
HOH
172
A
HOH
19
3
HOH
HOH
173
A
HOH
22
3
HOH
HOH
174
A
HOH
26
3
HOH
HOH
175
A
HOH
30
3
HOH
HOH
176
A
HOH
31
3
HOH
HOH
177
A
HOH
34
3
HOH
HOH
178
A
HOH
37
3
HOH
HOH
179
A
HOH
38
3
HOH
HOH
180
A
HOH
2
3
HOH
HOH
166
B
HOH
4
3
HOH
HOH
167
B
HOH
5
3
HOH
HOH
168
B
HOH
6
3
HOH
HOH
169
B
HOH
10
3
HOH
HOH
170
B
HOH
11
3
HOH
HOH
171
B
HOH
13
3
HOH
HOH
172
B
HOH
15
3
HOH
HOH
173
B
HOH
16
3
HOH
HOH
174
B
HOH
17
3
HOH
HOH
175
B
HOH
18
3
HOH
HOH
176
B
HOH
20
3
HOH
HOH
177
B
HOH
21
3
HOH
HOH
178
B
HOH
23
3
HOH
HOH
179
B
HOH
24
3
HOH
HOH
180
B
HOH
25
3
HOH
HOH
181
B
HOH
27
3
HOH
HOH
182
B
HOH
28
3
HOH
HOH
183
B
HOH
29
3
HOH
HOH
184
B
HOH
32
3
HOH
HOH
185
B
HOH
33
3
HOH
HOH
186
B
HOH
35
3
HOH
HOH
187
B
HOH
36
3
HOH
HOH
188
B
VAL
2
n
1
VAL
2
A
ASN
3
n
2
ASN
3
A
PRO
4
n
3
PRO
4
A
THR
5
n
4
THR
5
A
VAL
6
n
5
VAL
6
A
PHE
7
n
6
PHE
7
A
PHE
8
n
7
PHE
8
A
ASP
9
n
8
ASP
9
A
ILE
10
n
9
ILE
10
A
ALA
11
n
10
ALA
11
A
VAL
12
n
11
VAL
12
A
ASP
13
n
12
ASP
13
A
GLY
14
n
13
GLY
14
A
GLU
15
n
14
GLU
15
A
PRO
16
n
15
PRO
16
A
LEU
17
n
16
LEU
17
A
GLY
18
n
17
GLY
18
A
ARG
19
n
18
ARG
19
A
VAL
20
n
19
VAL
20
A
SER
21
n
20
SER
21
A
PHE
22
n
21
PHE
22
A
GLU
23
n
22
GLU
23
A
LEU
24
n
23
LEU
24
A
PHE
25
n
24
PHE
25
A
ALA
26
n
25
ALA
26
A
ASP
27
n
26
ASP
27
A
LYS
28
n
27
LYS
28
A
VAL
29
n
28
VAL
29
A
PRO
30
n
29
PRO
30
A
LYS
31
n
30
LYS
31
A
THR
32
n
31
THR
32
A
ALA
33
n
32
ALA
33
A
GLU
34
n
33
GLU
34
A
ASN
35
n
34
ASN
35
A
PHE
36
n
35
PHE
36
A
ARG
37
n
36
ARG
37
A
ALA
38
n
37
ALA
38
A
LEU
39
n
38
LEU
39
A
SER
40
n
39
SER
40
A
THR
41
n
40
THR
41
A
GLY
42
n
41
GLY
42
A
GLU
43
n
42
GLU
43
A
LYS
44
n
43
LYS
44
A
GLY
45
n
44
GLY
45
A
PHE
46
n
45
PHE
46
A
GLY
47
n
46
GLY
47
A
TYR
48
n
47
TYR
48
A
LYS
49
n
48
LYS
49
A
GLY
50
n
49
GLY
50
A
SER
51
n
50
SER
51
A
CYS
52
n
51
CYS
52
A
PHE
53
n
52
PHE
53
A
HIS
54
n
53
HIS
54
A
ARG
55
n
54
ARG
55
A
ILE
56
n
55
ILE
56
A
ILE
57
n
56
ILE
57
A
PRO
58
n
57
PRO
58
A
GLY
59
n
58
GLY
59
A
PHE
60
n
59
PHE
60
A
MET
61
n
60
MET
61
A
CYS
62
n
61
CYS
62
A
GLN
63
n
62
GLN
63
A
GLY
64
n
63
GLY
64
A
GLY
65
n
64
GLY
65
A
ASP
66
n
65
ASP
66
A
PHE
67
n
66
PHE
67
A
THR
68
n
67
THR
68
A
ARG
69
n
68
ARG
69
A
HIS
70
n
69
HIS
70
A
ASN
71
n
70
ASN
71
A
GLY
72
n
71
GLY
72
A
THR
73
n
72
THR
73
A
GLY
74
n
73
GLY
74
A
GLY
75
n
74
GLY
75
A
LYS
76
n
75
LYS
76
A
SER
77
n
76
SER
77
A
ILE
78
n
77
ILE
78
A
TYR
79
n
78
TYR
79
A
GLY
80
n
79
GLY
80
A
GLU
81
n
80
GLU
81
A
LYS
82
n
81
LYS
82
A
PHE
83
n
82
PHE
83
A
GLU
84
n
83
GLU
84
A
ASP
85
n
84
ASP
85
A
GLU
86
n
85
GLU
86
A
ASN
87
n
86
ASN
87
A
PHE
88
n
87
PHE
88
A
ILE
89
n
88
ILE
89
A
LEU
90
n
89
LEU
90
A
LYS
91
n
90
LYS
91
A
HIS
92
n
91
HIS
92
A
THR
93
n
92
THR
93
A
GLY
94
n
93
GLY
94
A
PRO
95
n
94
PRO
95
A
GLY
96
n
95
GLY
96
A
ILE
97
n
96
ILE
97
A
LEU
98
n
97
LEU
98
A
SER
99
n
98
SER
99
A
MET
100
n
99
MET
100
A
ALA
101
n
100
ALA
101
A
ASN
102
n
101
ASN
102
A
ALA
103
n
102
ALA
103
A
GLY
104
n
103
GLY
104
A
PRO
105
n
104
PRO
105
A
ASN
106
n
105
ASN
106
A
THR
107
n
106
THR
107
A
ASN
108
n
107
ASN
108
A
GLY
109
n
108
GLY
109
A
SER
110
n
109
SER
110
A
GLN
111
n
110
GLN
111
A
PHE
112
n
111
PHE
112
A
PHE
113
n
112
PHE
113
A
ILE
114
n
113
ILE
114
A
CYS
115
n
114
CYS
115
A
THR
116
n
115
THR
116
A
ALA
117
n
116
ALA
117
A
LYS
118
n
117
LYS
118
A
THR
119
n
118
THR
119
A
GLU
120
n
119
GLU
120
A
TRP
121
n
120
TRP
121
A
LEU
122
n
121
LEU
122
A
ASP
123
n
122
ASP
123
A
GLY
124
n
123
GLY
124
A
LYS
125
n
124
LYS
125
A
HIS
126
n
125
HIS
126
A
VAL
127
n
126
VAL
127
A
VAL
128
n
127
VAL
128
A
PHE
129
n
128
PHE
129
A
GLY
130
n
129
GLY
130
A
LYS
131
n
130
LYS
131
A
VAL
132
n
131
VAL
132
A
LYS
133
n
132
LYS
133
A
GLU
134
n
133
GLU
134
A
GLY
135
n
134
GLY
135
A
MET
136
n
135
MET
136
A
ASN
137
n
136
ASN
137
A
ILE
138
n
137
ILE
138
A
VAL
139
n
138
VAL
139
A
GLU
140
n
139
GLU
140
A
ALA
141
n
140
ALA
141
A
MET
142
n
141
MET
142
A
GLU
143
n
142
GLU
143
A
ARG
144
n
143
ARG
144
A
PHE
145
n
144
PHE
145
A
GLY
146
n
145
GLY
146
A
SER
147
n
146
SER
147
A
ARG
148
n
147
ARG
148
A
ASN
149
n
148
ASN
149
A
GLY
150
n
149
GLY
150
A
LYS
151
n
150
LYS
151
A
THR
152
n
151
THR
152
A
SER
153
n
152
SER
153
A
LYS
154
n
153
LYS
154
A
LYS
155
n
154
LYS
155
A
ILE
156
n
155
ILE
156
A
THR
157
n
156
THR
157
A
ILE
158
n
157
ILE
158
A
ALA
159
n
158
ALA
159
A
ASP
160
n
159
ASP
160
A
CYS
161
n
160
CYS
161
A
GLY
162
n
161
GLY
162
A
GLN
163
n
162
GLN
163
A
LEU
164
n
163
LEU
164
A
GLU
165
n
164
GLU
165
A
VAL
2
n
1
VAL
2
B
ASN
3
n
2
ASN
3
B
PRO
4
n
3
PRO
4
B
THR
5
n
4
THR
5
B
VAL
6
n
5
VAL
6
B
PHE
7
n
6
PHE
7
B
PHE
8
n
7
PHE
8
B
ASP
9
n
8
ASP
9
B
ILE
10
n
9
ILE
10
B
ALA
11
n
10
ALA
11
B
VAL
12
n
11
VAL
12
B
ASP
13
n
12
ASP
13
B
GLY
14
n
13
GLY
14
B
GLU
15
n
14
GLU
15
B
PRO
16
n
15
PRO
16
B
LEU
17
n
16
LEU
17
B
GLY
18
n
17
GLY
18
B
ARG
19
n
18
ARG
19
B
VAL
20
n
19
VAL
20
B
SER
21
n
20
SER
21
B
PHE
22
n
21
PHE
22
B
GLU
23
n
22
GLU
23
B
LEU
24
n
23
LEU
24
B
PHE
25
n
24
PHE
25
B
ALA
26
n
25
ALA
26
B
ASP
27
n
26
ASP
27
B
LYS
28
n
27
LYS
28
B
VAL
29
n
28
VAL
29
B
PRO
30
n
29
PRO
30
B
LYS
31
n
30
LYS
31
B
THR
32
n
31
THR
32
B
ALA
33
n
32
ALA
33
B
GLU
34
n
33
GLU
34
B
ASN
35
n
34
ASN
35
B
PHE
36
n
35
PHE
36
B
ARG
37
n
36
ARG
37
B
ALA
38
n
37
ALA
38
B
LEU
39
n
38
LEU
39
B
SER
40
n
39
SER
40
B
THR
41
n
40
THR
41
B
GLY
42
n
41
GLY
42
B
GLU
43
n
42
GLU
43
B
LYS
44
n
43
LYS
44
B
GLY
45
n
44
GLY
45
B
PHE
46
n
45
PHE
46
B
GLY
47
n
46
GLY
47
B
TYR
48
n
47
TYR
48
B
LYS
49
n
48
LYS
49
B
GLY
50
n
49
GLY
50
B
SER
51
n
50
SER
51
B
CYS
52
n
51
CYS
52
B
PHE
53
n
52
PHE
53
B
HIS
54
n
53
HIS
54
B
ARG
55
n
54
ARG
55
B
ILE
56
n
55
ILE
56
B
ILE
57
n
56
ILE
57
B
PRO
58
n
57
PRO
58
B
GLY
59
n
58
GLY
59
B
PHE
60
n
59
PHE
60
B
MET
61
n
60
MET
61
B
CYS
62
n
61
CYS
62
B
GLN
63
n
62
GLN
63
B
GLY
64
n
63
GLY
64
B
GLY
65
n
64
GLY
65
B
ASP
66
n
65
ASP
66
B
PHE
67
n
66
PHE
67
B
THR
68
n
67
THR
68
B
ARG
69
n
68
ARG
69
B
HIS
70
n
69
HIS
70
B
ASN
71
n
70
ASN
71
B
GLY
72
n
71
GLY
72
B
THR
73
n
72
THR
73
B
GLY
74
n
73
GLY
74
B
GLY
75
n
74
GLY
75
B
LYS
76
n
75
LYS
76
B
SER
77
n
76
SER
77
B
ILE
78
n
77
ILE
78
B
TYR
79
n
78
TYR
79
B
GLY
80
n
79
GLY
80
B
GLU
81
n
80
GLU
81
B
LYS
82
n
81
LYS
82
B
PHE
83
n
82
PHE
83
B
GLU
84
n
83
GLU
84
B
ASP
85
n
84
ASP
85
B
GLU
86
n
85
GLU
86
B
ASN
87
n
86
ASN
87
B
PHE
88
n
87
PHE
88
B
ILE
89
n
88
ILE
89
B
LEU
90
n
89
LEU
90
B
LYS
91
n
90
LYS
91
B
HIS
92
n
91
HIS
92
B
THR
93
n
92
THR
93
B
GLY
94
n
93
GLY
94
B
PRO
95
n
94
PRO
95
B
GLY
96
n
95
GLY
96
B
ILE
97
n
96
ILE
97
B
LEU
98
n
97
LEU
98
B
SER
99
n
98
SER
99
B
MET
100
n
99
MET
100
B
ALA
101
n
100
ALA
101
B
ASN
102
n
101
ASN
102
B
ALA
103
n
102
ALA
103
B
GLY
104
n
103
GLY
104
B
PRO
105
n
104
PRO
105
B
ASN
106
n
105
ASN
106
B
THR
107
n
106
THR
107
B
ASN
108
n
107
ASN
108
B
GLY
109
n
108
GLY
109
B
SER
110
n
109
SER
110
B
GLN
111
n
110
GLN
111
B
PHE
112
n
111
PHE
112
B
PHE
113
n
112
PHE
113
B
ILE
114
n
113
ILE
114
B
CYS
115
n
114
CYS
115
B
THR
116
n
115
THR
116
B
ALA
117
n
116
ALA
117
B
LYS
118
n
117
LYS
118
B
THR
119
n
118
THR
119
B
GLU
120
n
119
GLU
120
B
TRP
121
n
120
TRP
121
B
LEU
122
n
121
LEU
122
B
ASP
123
n
122
ASP
123
B
GLY
124
n
123
GLY
124
B
LYS
125
n
124
LYS
125
B
HIS
126
n
125
HIS
126
B
VAL
127
n
126
VAL
127
B
VAL
128
n
127
VAL
128
B
PHE
129
n
128
PHE
129
B
GLY
130
n
129
GLY
130
B
LYS
131
n
130
LYS
131
B
VAL
132
n
131
VAL
132
B
LYS
133
n
132
LYS
133
B
GLU
134
n
133
GLU
134
B
GLY
135
n
134
GLY
135
B
MET
136
n
135
MET
136
B
ASN
137
n
136
ASN
137
B
ILE
138
n
137
ILE
138
B
VAL
139
n
138
VAL
139
B
GLU
140
n
139
GLU
140
B
ALA
141
n
140
ALA
141
B
MET
142
n
141
MET
142
B
GLU
143
n
142
GLU
143
B
ARG
144
n
143
ARG
144
B
PHE
145
n
144
PHE
145
B
GLY
146
n
145
GLY
146
B
SER
147
n
146
SER
147
B
ARG
148
n
147
ARG
148
B
ASN
149
n
148
ASN
149
B
GLY
150
n
149
GLY
150
B
LYS
151
n
150
LYS
151
B
THR
152
n
151
THR
152
B
SER
153
n
152
SER
153
B
LYS
154
n
153
LYS
154
B
LYS
155
n
154
LYS
155
B
ILE
156
n
155
ILE
156
B
THR
157
n
156
THR
157
B
ILE
158
n
157
ILE
158
B
ALA
159
n
158
ALA
159
B
ASP
160
n
159
ASP
160
B
CYS
161
n
160
CYS
161
B
GLY
162
n
161
GLY
162
B
GLN
163
n
162
GLN
163
B
LEU
164
n
163
LEU
164
B
GLU
165
n
164
GLU
165
B
SIN
1
n
1
SIN
1
C
ALA
2
n
2
ALA
2
C
ALA
3
n
3
ALA
3
C
PRO
4
n
4
PRO
4
C
PHE
5
n
5
PHE
5
C
NIT
6
n
6
NIT
6
C
SIN
1
n
1
SIN
1
D
ALA
2
n
2
ALA
2
D
ALA
3
n
3
ALA
3
D
PRO
4
n
4
PRO
4
D
PHE
5
n
5
PHE
5
D
NIT
6
n
6
NIT
6
D
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
PHE
60
0.079
SIDE CHAIN
1
4.30
0.50
120.30
124.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
37
37
37
N
1
6.88
1.10
114.20
121.08
A
A
A
CA
CB
SG
CYS
CYS
CYS
52
52
52
N
1
6.04
0.80
106.30
112.34
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
121
121
121
N
1
-5.26
0.80
107.30
102.04
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
121
121
121
N
1
3.60
0.50
120.30
123.90
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
148
148
148
N
1
-3.12
0.50
120.30
117.18
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
19
19
19
N
1
9.24
1.10
114.20
123.44
B
B
B
CA
CB
SG
CYS
CYS
CYS
52
52
52
N
1
3.38
0.50
120.30
123.68
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
55
55
55
N
1
10.69
1.70
113.30
123.99
B
B
B
CA
CB
CG
MET
MET
MET
61
61
61
N
1
6.55
0.80
106.30
112.85
B
B
B
CD1
CG
CD2
TRP
TRP
TRP
121
121
121
N
1
-6.12
0.80
107.30
101.18
B
B
B
CE2
CD2
CG
TRP
TRP
TRP
121
121
121
N
1
A
A
NE2
CD2
HIS
HIS
54
54
-0.079
0.011
1.373
1.294
N
1
A
A
NE2
CD2
HIS
HIS
70
70
-0.067
0.011
1.373
1.306
N
1
B
B
NE2
CD2
HIS
HIS
54
54
-0.068
0.011
1.373
1.305
N
1
B
B
NE2
CD2
HIS
HIS
70
70
-0.074
0.011
1.373
1.299
N
1
A
B
HZ3
OE1
LYS
GLU
154
140
1.29
1_555
4_566
1
A
PHE
60
-129.74
-74.82
1
A
ASN
71
-149.61
27.31
1
A
PHE
129
-142.04
10.54
1
A
LYS
133
-107.63
-62.43
1
B
ASP
13
32.10
54.54
1
B
LEU
17
-97.14
-94.91
1
B
PHE
60
-139.88
-76.35
1
B
THR
68
-97.57
-60.29
1
B
HIS
70
59.26
4.45
1
B
GLU
81
43.40
-84.18
1
B
ASN
87
179.10
176.31
1
B
GLU
120
-47.67
-19.28
1
B
PHE
129
-148.92
12.41
0.1890000
0.1890000
2.4
1
2.4
38
2644
0
0
2606
0.013
3.1
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
CYCLOPHILIN A, AAPF PEPTIDE SUBSTRATE
RECOMBINANT CYCLOPHILIN A FROM HUMAN T CELL
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
PHE
25
A
PHE
24
HELX_P
A
VAL
29
A
VAL
28
5
H1
5
A
PRO
30
A
PRO
29
HELX_P
A
THR
41
A
THR
40
1
H2
12
A
THR
119
A
THR
118
HELX_P
A
ASP
123
A
ASP
122
5
H3
5
A
GLY
135
A
GLY
134
HELX_P
A
MET
142
A
MET
141
1
H4
8
A
GLU
143
A
GLU
142
HELX_P
A
GLY
146
A
GLY
145
5
H5
4
B
PHE
25
B
PHE
24
HELX_P
B
VAL
29
B
VAL
28
5
H6
5
B
PRO
30
B
PRO
29
HELX_P
B
THR
41
B
THR
40
1
H7
12
B
THR
119
B
THR
118
HELX_P
B
ASP
123
B
ASP
122
5
H8
5
B
GLY
135
B
GLY
134
HELX_P
B
MET
142
B
MET
141
1
H9
8
B
GLU
143
B
GLU
142
HELX_P
B
GLY
146
B
GLY
145
5
H10
4
covale
1.330
C
SIN
1
C
C4
SIN
1
1_555
C
ALA
2
C
N
ALA
2
1_555
covale
1.306
C
NIT
6
C
N1
NIT
6
1_555
C
PHE
5
C
C
PHE
5
1_555
covale
1.328
D
SIN
1
D
C4
SIN
1
1_555
D
ALA
2
D
N
ALA
2
1_555
covale
1.330
D
NIT
6
D
N1
NIT
6
1_555
D
PHE
5
D
C
PHE
5
1_555
ISOMERASE/ ISOMERASE SUBSTRATE
COMPLEX (ISOMERASE-SUBSTRATE), ISOMERASE- ISOMERASE SUBSTRATE COMPLEX
C
ALA
3
C
ALA
3
1
C
PRO
4
C
PRO
4
14.12
D
ALA
3
D
ALA
3
1
D
PRO
4
D
PRO
4
21.40
given
-0.999900
-0.010700
-0.011300
-0.013000
0.974900
0.222400
0.008700
0.222500
-0.974900
-1.22150
-11.12740
99.06050
CYPH_HUMAN
UNP
1
1
P05092
VNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGE
KFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC
GQLE
1RMH
PDB
2
1
1RMH
XAAPFX
1
164
1RMH
2
165
P05092
A
1
1
164
1
164
1RMH
2
165
P05092
B
1
1
164
1
6
1RMH
1
6
1RMH
C
2
1
6
1
6
1RMH
1
6
1RMH
D
2
1
6
8
8
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
A
PRO
4
A
PRO
3
A
ALA
11
A
ALA
10
A
PRO
16
A
PRO
15
A
LEU
24
A
LEU
23
A
GLY
50
A
GLY
49
A
ILE
56
A
ILE
55
A
MET
61
A
MET
60
A
GLY
64
A
GLY
63
A
GLY
96
A
GLY
95
A
ALA
101
A
ALA
100
A
GLN
111
A
GLN
110
A
THR
116
A
THR
115
A
VAL
127
A
VAL
126
A
GLU
134
A
GLU
133
A
LYS
155
A
LYS
154
A
LEU
164
A
LEU
163
B
PRO
4
B
PRO
3
B
ALA
11
B
ALA
10
B
PRO
16
B
PRO
15
B
LEU
24
B
LEU
23
B
GLY
50
B
GLY
49
B
ILE
56
B
ILE
55
B
MET
61
B
MET
60
B
GLY
64
B
GLY
63
B
GLY
96
B
GLY
95
B
ALA
101
B
ALA
100
B
GLN
111
B
GLN
110
B
THR
116
B
THR
115
B
VAL
127
B
VAL
126
B
GLU
134
B
GLU
133
B
LYS
155
B
LYS
154
B
LEU
164
B
LEU
163
BINDING SITE FOR CHAIN C OF AAPF PEPTIDE SUBSTRATE
Software
13
BINDING SITE FOR CHAIN D OF AAPF PEPTIDE SUBSTRATE
Software
14
A
ARG
55
A
ARG
54
13
1_555
A
MET
61
A
MET
60
13
1_555
A
GLN
63
A
GLN
62
13
1_555
A
ALA
101
A
ALA
100
13
1_555
A
ASN
102
A
ASN
101
13
1_555
A
GLN
111
A
GLN
110
13
1_555
A
TRP
121
A
TRP
120
13
1_555
A
LEU
122
A
LEU
121
13
1_555
A
HIS
126
A
HIS
125
13
1_555
A
ARG
148
A
ARG
147
13
1_555
A
HOH
170
E
HOH
13
1_555
A
HOH
173
E
HOH
13
1_555
B
TRP
121
B
TRP
120
13
1_555
A
TRP
121
A
TRP
120
14
1_555
B
ARG
55
B
ARG
54
14
1_555
B
PHE
60
B
PHE
59
14
1_555
B
GLN
63
B
GLN
62
14
1_555
B
ALA
101
B
ALA
100
14
1_555
B
ASN
102
B
ASN
101
14
1_555
B
GLN
111
B
GLN
110
14
1_555
B
PHE
113
B
PHE
112
14
1_555
B
TRP
121
B
TRP
120
14
1_555
B
LEU
122
B
LEU
121
14
1_555
B
HIS
126
B
HIS
125
14
1_555
B
ARG
148
B
ARG
147
14
1_555
B
HOH
166
F
HOH
14
1_555
B
HOH
175
F
HOH
14
1_555
19
P 21 21 21