1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Roesch, P.
Sticht, H.
Wildegger, G.
Bentrop, D.
Darimont, B.
Sterner, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
Fe4 S4
351.640
IRON/SULFUR CLUSTER
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
237
726
735
10.1111/j.1432-1033.1996.0726p.x
8647119
An NMR-derived model for the solution structure of oxidized Thermotoga maritima 1[Fe4-S4] ferredoxin.
1996
10.2210/pdb1rof/pdb
pdb_00001rof
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
4FE-4S
6218.028
FERREDOXIN
1
man
polymer
351.640
IRON/SULFUR CLUSTER
1
syn
non-polymer
no
no
MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVEE
MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVEE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermotoga
Escherichia
sample
POTENTIAL
2336
Thermotoga maritima
562
Escherichia coli
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1996-06-10
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1995-11-24
REL
SF4
IRON/SULFUR CLUSTER
10
BRUNGER
refinement
X-PLOR
FS4
61
2
SF4
SF4
61
A
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
VAL
3
n
3
VAL
3
A
ARG
4
n
4
ARG
4
A
VAL
5
n
5
VAL
5
A
ASP
6
n
6
ASP
6
A
ALA
7
n
7
ALA
7
A
ASP
8
n
8
ASP
8
A
ALA
9
n
9
ALA
9
A
CYS
10
n
10
CYS
10
A
ILE
11
n
11
ILE
11
A
GLY
12
n
12
GLY
12
A
CYS
13
n
13
CYS
13
A
GLY
14
n
14
GLY
14
A
VAL
15
n
15
VAL
15
A
CYS
16
n
16
CYS
16
A
GLU
17
n
17
GLU
17
A
ASN
18
n
18
ASN
18
A
LEU
19
n
19
LEU
19
A
CYS
20
n
20
CYS
20
A
PRO
21
n
21
PRO
21
A
ASP
22
n
22
ASP
22
A
VAL
23
n
23
VAL
23
A
PHE
24
n
24
PHE
24
A
GLN
25
n
25
GLN
25
A
LEU
26
n
26
LEU
26
A
GLY
27
n
27
GLY
27
A
ASP
28
n
28
ASP
28
A
ASP
29
n
29
ASP
29
A
GLY
30
n
30
GLY
30
A
LYS
31
n
31
LYS
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
VAL
34
n
34
VAL
34
A
LEU
35
n
35
LEU
35
A
GLN
36
n
36
GLN
36
A
PRO
37
n
37
PRO
37
A
GLU
38
n
38
GLU
38
A
THR
39
n
39
THR
39
A
ASP
40
n
40
ASP
40
A
LEU
41
n
41
LEU
41
A
PRO
42
n
42
PRO
42
A
CYS
43
n
43
CYS
43
A
ALA
44
n
44
ALA
44
A
LYS
45
n
45
LYS
45
A
ASP
46
n
46
ASP
46
A
ALA
47
n
47
ALA
47
A
ALA
48
n
48
ALA
48
A
ASP
49
n
49
ASP
49
A
SER
50
n
50
SER
50
A
CYS
51
n
51
CYS
51
A
PRO
52
n
52
PRO
52
A
THR
53
n
53
THR
53
A
GLY
54
n
54
GLY
54
A
ALA
55
n
55
ALA
55
A
ILE
56
n
56
ILE
56
A
SER
57
n
57
SER
57
A
VAL
58
n
58
VAL
58
A
GLU
59
n
59
GLU
59
A
GLU
60
n
60
GLU
60
A
author_defined_assembly
1
monomeric
A
CYS
10
A
SG
CYS
10
1_555
A
SF4
61
B
FE1
SF4
1_555
A
SF4
61
B
S2
SF4
1_555
114.0
A
CYS
10
A
SG
CYS
10
1_555
A
SF4
61
B
FE1
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
115.0
A
SF4
61
B
S2
SF4
1_555
A
SF4
61
B
FE1
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
104.3
A
CYS
10
A
SG
CYS
10
1_555
A
SF4
61
B
FE1
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
114.2
A
SF4
61
B
S2
SF4
1_555
A
SF4
61
B
FE1
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
104.3
A
SF4
61
B
S3
SF4
1_555
A
SF4
61
B
FE1
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
103.7
A
CYS
13
A
SG
CYS
13
1_555
A
SF4
61
B
FE2
SF4
1_555
A
SF4
61
B
S1
SF4
1_555
112.6
A
CYS
13
A
SG
CYS
13
1_555
A
SF4
61
B
FE2
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
115.8
A
SF4
61
B
S1
SF4
1_555
A
SF4
61
B
FE2
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
104.2
A
CYS
13
A
SG
CYS
13
1_555
A
SF4
61
B
FE2
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
115.0
A
SF4
61
B
S1
SF4
1_555
A
SF4
61
B
FE2
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
104.3
A
SF4
61
B
S3
SF4
1_555
A
SF4
61
B
FE2
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
103.7
A
CYS
16
A
SG
CYS
16
1_555
A
SF4
61
B
FE3
SF4
1_555
A
SF4
61
B
S1
SF4
1_555
112.8
A
CYS
16
A
SG
CYS
16
1_555
A
SF4
61
B
FE3
SF4
1_555
A
SF4
61
B
S2
SF4
1_555
115.7
A
SF4
61
B
S1
SF4
1_555
A
SF4
61
B
FE3
SF4
1_555
A
SF4
61
B
S2
SF4
1_555
103.6
A
CYS
16
A
SG
CYS
16
1_555
A
SF4
61
B
FE3
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
114.4
A
SF4
61
B
S1
SF4
1_555
A
SF4
61
B
FE3
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
104.5
A
SF4
61
B
S2
SF4
1_555
A
SF4
61
B
FE3
SF4
1_555
A
SF4
61
B
S4
SF4
1_555
104.6
A
CYS
51
A
SG
CYS
51
1_555
A
SF4
61
B
FE4
SF4
1_555
A
SF4
61
B
S1
SF4
1_555
113.9
A
CYS
51
A
SG
CYS
51
1_555
A
SF4
61
B
FE4
SF4
1_555
A
SF4
61
B
S2
SF4
1_555
115.1
A
SF4
61
B
S1
SF4
1_555
A
SF4
61
B
FE4
SF4
1_555
A
SF4
61
B
S2
SF4
1_555
103.5
A
CYS
51
A
SG
CYS
51
1_555
A
SF4
61
B
FE4
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
114.8
A
SF4
61
B
S1
SF4
1_555
A
SF4
61
B
FE4
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
104.1
A
SF4
61
B
S2
SF4
1_555
A
SF4
61
B
FE4
SF4
1_555
A
SF4
61
B
S3
SF4
1_555
104.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
4
A
O
ARG
4
A
N
SER
57
A
N
SER
57
1
A
ARG
4
0.200
SIDE CHAIN
2
A
ARG
4
0.315
SIDE CHAIN
3
A
ARG
4
0.185
SIDE CHAIN
4
A
ARG
4
0.155
SIDE CHAIN
5
A
ARG
4
0.206
SIDE CHAIN
6
A
ARG
4
0.190
SIDE CHAIN
7
A
ARG
4
0.317
SIDE CHAIN
8
A
ARG
4
0.318
SIDE CHAIN
9
A
ARG
4
0.174
SIDE CHAIN
10
A
ARG
4
0.311
SIDE CHAIN
1
A
LYS
2
-162.68
54.75
1
A
LEU
19
-47.46
-77.52
1
A
GLN
25
-144.98
-152.29
1
A
LYS
33
-105.36
-169.08
1
A
PRO
37
-79.22
-73.19
1
A
THR
39
-57.61
100.48
1
A
LEU
41
-41.50
162.58
1
A
SER
50
-105.18
-72.16
2
A
VAL
3
-154.96
-46.55
2
A
ALA
7
-97.14
-64.94
2
A
ILE
11
-140.30
43.53
2
A
LEU
19
-47.60
-80.24
2
A
GLN
25
-149.05
-158.32
2
A
ASP
28
-111.13
-80.83
2
A
PRO
37
-81.02
-78.92
2
A
THR
39
-54.86
109.07
2
A
LEU
41
-41.23
160.90
2
A
SER
50
-102.01
-70.56
2
A
ILE
56
-107.39
78.65
2
A
GLU
59
-122.79
-50.72
3
A
VAL
3
-156.64
-45.51
3
A
CYS
10
-42.59
151.96
3
A
LEU
19
-46.24
-82.80
3
A
PHE
24
-99.88
55.58
3
A
ASP
28
-74.51
-91.45
3
A
ASP
29
-87.18
35.79
3
A
PRO
37
-80.68
-76.02
3
A
THR
39
-57.55
98.58
3
A
SER
50
-97.18
-76.98
3
A
CYS
51
-45.37
103.97
4
A
VAL
3
-155.00
-45.41
4
A
LEU
19
-46.68
-81.97
4
A
PHE
24
-107.65
75.87
4
A
GLN
25
-145.81
-153.99
4
A
LEU
26
-150.63
-159.37
4
A
LYS
33
-123.34
-153.06
4
A
PRO
37
-78.61
-73.92
4
A
THR
39
-55.21
108.44
4
A
LEU
41
-42.04
160.65
4
A
SER
50
-105.28
-73.86
4
A
ILE
56
-112.10
76.27
4
A
GLU
59
-132.72
-53.16
5
A
VAL
3
-157.39
-44.97
5
A
CYS
16
-96.95
-69.30
5
A
PHE
24
-93.59
58.42
5
A
ASP
28
-60.77
-73.90
5
A
LYS
33
-113.88
-158.29
5
A
PRO
37
-79.28
-76.26
5
A
THR
39
-57.38
101.21
5
A
LEU
41
-40.94
159.88
5
A
SER
50
-103.35
-82.04
5
A
CYS
51
-41.66
100.50
5
A
GLU
59
-116.87
55.93
6
A
VAL
3
-156.31
-44.99
6
A
CYS
16
-98.82
-80.71
6
A
CYS
20
-161.71
107.94
6
A
VAL
23
-124.87
-51.24
6
A
GLN
25
-126.53
-142.74
6
A
SER
50
-94.61
-89.65
6
A
CYS
51
-40.36
100.96
7
A
VAL
3
-156.37
-44.92
7
A
LEU
19
-47.52
-82.30
7
A
PHE
24
-94.82
49.16
7
A
LEU
26
-133.03
-88.67
7
A
ASP
28
-57.29
-80.16
7
A
LYS
33
-105.84
-149.24
7
A
PRO
37
-78.43
-73.18
7
A
LEU
41
-40.33
161.24
7
A
SER
50
-103.90
-81.38
7
A
CYS
51
-42.90
102.58
7
A
GLU
59
-116.68
58.11
8
A
VAL
3
-155.06
-45.20
8
A
LEU
19
-47.24
-81.36
8
A
GLN
25
-145.20
-148.43
8
A
ASP
29
-124.93
-164.97
8
A
PRO
37
-80.66
-77.41
8
A
THR
39
-57.39
97.90
8
A
SER
50
-101.57
-85.08
8
A
CYS
51
-42.56
102.50
9
A
LYS
2
-166.46
38.04
9
A
ILE
11
-143.31
39.32
9
A
LEU
19
-47.49
-84.64
9
A
PHE
24
-91.94
50.58
9
A
LEU
26
-139.43
-79.67
9
A
ALA
32
-105.56
78.48
9
A
PRO
37
-79.99
-76.28
9
A
THR
39
-58.58
101.54
9
A
LEU
41
-42.00
163.62
9
A
SER
50
-106.21
-79.13
9
A
CYS
51
-46.60
104.36
10
A
VAL
3
-155.04
-36.17
10
A
ILE
11
-150.64
40.47
10
A
CYS
16
-97.14
-71.82
10
A
GLN
25
-129.79
-144.78
10
A
PRO
37
-83.84
-79.37
10
A
THR
39
-57.40
97.43
10
A
LEU
41
-42.72
159.98
10
A
SER
50
-80.53
-89.51
10
A
CYS
51
-39.86
99.31
10
A
GLU
59
-108.18
-65.35
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
NMR STUDY OF 4FE-4S FERREDOXIN OF THERMATOGA MARITIMA
1
Y
N
2
N
N
A
ALA
44
A
ALA
44
HELX_P
A
SER
50
A
SER
50
1
1
7
disulf
2.030
A
CYS
20
A
SG
CYS
20
1_555
A
CYS
43
A
SG
CYS
43
1_555
metalc
2.301
A
CYS
10
A
SG
CYS
10
1_555
A
SF4
61
B
FE1
SF4
1_555
metalc
2.300
A
CYS
13
A
SG
CYS
13
1_555
A
SF4
61
B
FE2
SF4
1_555
metalc
2.296
A
CYS
16
A
SG
CYS
16
1_555
A
SF4
61
B
FE3
SF4
1_555
metalc
2.307
A
CYS
51
A
SG
CYS
51
1_555
A
SF4
61
B
FE4
SF4
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT, IRON-SULFUR
FER_THEMA
UNP
1
1
P46797
MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVEE
1
60
1ROF
1
60
P46797
A
1
1
60
2
anti-parallel
A
ARG
4
A
ARG
4
A
VAL
5
A
VAL
5
A
ILE
56
A
ILE
56
A
SER
57
A
SER
57
BINDING SITE FOR RESIDUE SF4 A 61
A
SF4
61
Software
9
A
CYS
10
A
CYS
10
9
1_555
A
CYS
13
A
CYS
13
9
1_555
A
GLY
14
A
GLY
14
9
1_555
A
VAL
15
A
VAL
15
9
1_555
A
CYS
16
A
CYS
16
9
1_555
A
ALA
32
A
ALA
32
9
1_555
A
CYS
51
A
CYS
51
9
1_555
A
PRO
52
A
PRO
52
9
1_555
A
THR
53
A
THR
53
9
1_555
1
P 1