1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Roesch, P. Sticht, H. Wildegger, G. Bentrop, D. Darimont, B. Sterner, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking Fe4 S4 351.640 IRON/SULFUR CLUSTER non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking IX Eur.J.Biochem. EJBCAI 0262 0014-2956 237 726 735 10.1111/j.1432-1033.1996.0726p.x 8647119 An NMR-derived model for the solution structure of oxidized Thermotoga maritima 1[Fe4-S4] ferredoxin. 1996 10.2210/pdb1rof/pdb pdb_00001rof 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4FE-4S 6218.028 FERREDOXIN 1 man polymer 351.640 IRON/SULFUR CLUSTER 1 syn non-polymer no no MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVEE MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVEE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermotoga Escherichia sample POTENTIAL 2336 Thermotoga maritima 562 Escherichia coli database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1996-06-10 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-03-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1995-11-24 REL SF4 IRON/SULFUR CLUSTER 10 BRUNGER refinement X-PLOR FS4 61 2 SF4 SF4 61 A MET 1 n 1 MET 1 A LYS 2 n 2 LYS 2 A VAL 3 n 3 VAL 3 A ARG 4 n 4 ARG 4 A VAL 5 n 5 VAL 5 A ASP 6 n 6 ASP 6 A ALA 7 n 7 ALA 7 A ASP 8 n 8 ASP 8 A ALA 9 n 9 ALA 9 A CYS 10 n 10 CYS 10 A ILE 11 n 11 ILE 11 A GLY 12 n 12 GLY 12 A CYS 13 n 13 CYS 13 A GLY 14 n 14 GLY 14 A VAL 15 n 15 VAL 15 A CYS 16 n 16 CYS 16 A GLU 17 n 17 GLU 17 A ASN 18 n 18 ASN 18 A LEU 19 n 19 LEU 19 A CYS 20 n 20 CYS 20 A PRO 21 n 21 PRO 21 A ASP 22 n 22 ASP 22 A VAL 23 n 23 VAL 23 A PHE 24 n 24 PHE 24 A GLN 25 n 25 GLN 25 A LEU 26 n 26 LEU 26 A GLY 27 n 27 GLY 27 A ASP 28 n 28 ASP 28 A ASP 29 n 29 ASP 29 A GLY 30 n 30 GLY 30 A LYS 31 n 31 LYS 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A VAL 34 n 34 VAL 34 A LEU 35 n 35 LEU 35 A GLN 36 n 36 GLN 36 A PRO 37 n 37 PRO 37 A GLU 38 n 38 GLU 38 A THR 39 n 39 THR 39 A ASP 40 n 40 ASP 40 A LEU 41 n 41 LEU 41 A PRO 42 n 42 PRO 42 A CYS 43 n 43 CYS 43 A ALA 44 n 44 ALA 44 A LYS 45 n 45 LYS 45 A ASP 46 n 46 ASP 46 A ALA 47 n 47 ALA 47 A ALA 48 n 48 ALA 48 A ASP 49 n 49 ASP 49 A SER 50 n 50 SER 50 A CYS 51 n 51 CYS 51 A PRO 52 n 52 PRO 52 A THR 53 n 53 THR 53 A GLY 54 n 54 GLY 54 A ALA 55 n 55 ALA 55 A ILE 56 n 56 ILE 56 A SER 57 n 57 SER 57 A VAL 58 n 58 VAL 58 A GLU 59 n 59 GLU 59 A GLU 60 n 60 GLU 60 A author_defined_assembly 1 monomeric A CYS 10 A SG CYS 10 1_555 A SF4 61 B FE1 SF4 1_555 A SF4 61 B S2 SF4 1_555 114.0 A CYS 10 A SG CYS 10 1_555 A SF4 61 B FE1 SF4 1_555 A SF4 61 B S3 SF4 1_555 115.0 A SF4 61 B S2 SF4 1_555 A SF4 61 B FE1 SF4 1_555 A SF4 61 B S3 SF4 1_555 104.3 A CYS 10 A SG CYS 10 1_555 A SF4 61 B FE1 SF4 1_555 A SF4 61 B S4 SF4 1_555 114.2 A SF4 61 B S2 SF4 1_555 A SF4 61 B FE1 SF4 1_555 A SF4 61 B S4 SF4 1_555 104.3 A SF4 61 B S3 SF4 1_555 A SF4 61 B FE1 SF4 1_555 A SF4 61 B S4 SF4 1_555 103.7 A CYS 13 A SG CYS 13 1_555 A SF4 61 B FE2 SF4 1_555 A SF4 61 B S1 SF4 1_555 112.6 A CYS 13 A SG CYS 13 1_555 A SF4 61 B FE2 SF4 1_555 A SF4 61 B S3 SF4 1_555 115.8 A SF4 61 B S1 SF4 1_555 A SF4 61 B FE2 SF4 1_555 A SF4 61 B S3 SF4 1_555 104.2 A CYS 13 A SG CYS 13 1_555 A SF4 61 B FE2 SF4 1_555 A SF4 61 B S4 SF4 1_555 115.0 A SF4 61 B S1 SF4 1_555 A SF4 61 B FE2 SF4 1_555 A SF4 61 B S4 SF4 1_555 104.3 A SF4 61 B S3 SF4 1_555 A SF4 61 B FE2 SF4 1_555 A SF4 61 B S4 SF4 1_555 103.7 A CYS 16 A SG CYS 16 1_555 A SF4 61 B FE3 SF4 1_555 A SF4 61 B S1 SF4 1_555 112.8 A CYS 16 A SG CYS 16 1_555 A SF4 61 B FE3 SF4 1_555 A SF4 61 B S2 SF4 1_555 115.7 A SF4 61 B S1 SF4 1_555 A SF4 61 B FE3 SF4 1_555 A SF4 61 B S2 SF4 1_555 103.6 A CYS 16 A SG CYS 16 1_555 A SF4 61 B FE3 SF4 1_555 A SF4 61 B S4 SF4 1_555 114.4 A SF4 61 B S1 SF4 1_555 A SF4 61 B FE3 SF4 1_555 A SF4 61 B S4 SF4 1_555 104.5 A SF4 61 B S2 SF4 1_555 A SF4 61 B FE3 SF4 1_555 A SF4 61 B S4 SF4 1_555 104.6 A CYS 51 A SG CYS 51 1_555 A SF4 61 B FE4 SF4 1_555 A SF4 61 B S1 SF4 1_555 113.9 A CYS 51 A SG CYS 51 1_555 A SF4 61 B FE4 SF4 1_555 A SF4 61 B S2 SF4 1_555 115.1 A SF4 61 B S1 SF4 1_555 A SF4 61 B FE4 SF4 1_555 A SF4 61 B S2 SF4 1_555 103.5 A CYS 51 A SG CYS 51 1_555 A SF4 61 B FE4 SF4 1_555 A SF4 61 B S3 SF4 1_555 114.8 A SF4 61 B S1 SF4 1_555 A SF4 61 B FE4 SF4 1_555 A SF4 61 B S3 SF4 1_555 104.1 A SF4 61 B S2 SF4 1_555 A SF4 61 B FE4 SF4 1_555 A SF4 61 B S3 SF4 1_555 104.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 4 A O ARG 4 A N SER 57 A N SER 57 1 A ARG 4 0.200 SIDE CHAIN 2 A ARG 4 0.315 SIDE CHAIN 3 A ARG 4 0.185 SIDE CHAIN 4 A ARG 4 0.155 SIDE CHAIN 5 A ARG 4 0.206 SIDE CHAIN 6 A ARG 4 0.190 SIDE CHAIN 7 A ARG 4 0.317 SIDE CHAIN 8 A ARG 4 0.318 SIDE CHAIN 9 A ARG 4 0.174 SIDE CHAIN 10 A ARG 4 0.311 SIDE CHAIN 1 A LYS 2 -162.68 54.75 1 A LEU 19 -47.46 -77.52 1 A GLN 25 -144.98 -152.29 1 A LYS 33 -105.36 -169.08 1 A PRO 37 -79.22 -73.19 1 A THR 39 -57.61 100.48 1 A LEU 41 -41.50 162.58 1 A SER 50 -105.18 -72.16 2 A VAL 3 -154.96 -46.55 2 A ALA 7 -97.14 -64.94 2 A ILE 11 -140.30 43.53 2 A LEU 19 -47.60 -80.24 2 A GLN 25 -149.05 -158.32 2 A ASP 28 -111.13 -80.83 2 A PRO 37 -81.02 -78.92 2 A THR 39 -54.86 109.07 2 A LEU 41 -41.23 160.90 2 A SER 50 -102.01 -70.56 2 A ILE 56 -107.39 78.65 2 A GLU 59 -122.79 -50.72 3 A VAL 3 -156.64 -45.51 3 A CYS 10 -42.59 151.96 3 A LEU 19 -46.24 -82.80 3 A PHE 24 -99.88 55.58 3 A ASP 28 -74.51 -91.45 3 A ASP 29 -87.18 35.79 3 A PRO 37 -80.68 -76.02 3 A THR 39 -57.55 98.58 3 A SER 50 -97.18 -76.98 3 A CYS 51 -45.37 103.97 4 A VAL 3 -155.00 -45.41 4 A LEU 19 -46.68 -81.97 4 A PHE 24 -107.65 75.87 4 A GLN 25 -145.81 -153.99 4 A LEU 26 -150.63 -159.37 4 A LYS 33 -123.34 -153.06 4 A PRO 37 -78.61 -73.92 4 A THR 39 -55.21 108.44 4 A LEU 41 -42.04 160.65 4 A SER 50 -105.28 -73.86 4 A ILE 56 -112.10 76.27 4 A GLU 59 -132.72 -53.16 5 A VAL 3 -157.39 -44.97 5 A CYS 16 -96.95 -69.30 5 A PHE 24 -93.59 58.42 5 A ASP 28 -60.77 -73.90 5 A LYS 33 -113.88 -158.29 5 A PRO 37 -79.28 -76.26 5 A THR 39 -57.38 101.21 5 A LEU 41 -40.94 159.88 5 A SER 50 -103.35 -82.04 5 A CYS 51 -41.66 100.50 5 A GLU 59 -116.87 55.93 6 A VAL 3 -156.31 -44.99 6 A CYS 16 -98.82 -80.71 6 A CYS 20 -161.71 107.94 6 A VAL 23 -124.87 -51.24 6 A GLN 25 -126.53 -142.74 6 A SER 50 -94.61 -89.65 6 A CYS 51 -40.36 100.96 7 A VAL 3 -156.37 -44.92 7 A LEU 19 -47.52 -82.30 7 A PHE 24 -94.82 49.16 7 A LEU 26 -133.03 -88.67 7 A ASP 28 -57.29 -80.16 7 A LYS 33 -105.84 -149.24 7 A PRO 37 -78.43 -73.18 7 A LEU 41 -40.33 161.24 7 A SER 50 -103.90 -81.38 7 A CYS 51 -42.90 102.58 7 A GLU 59 -116.68 58.11 8 A VAL 3 -155.06 -45.20 8 A LEU 19 -47.24 -81.36 8 A GLN 25 -145.20 -148.43 8 A ASP 29 -124.93 -164.97 8 A PRO 37 -80.66 -77.41 8 A THR 39 -57.39 97.90 8 A SER 50 -101.57 -85.08 8 A CYS 51 -42.56 102.50 9 A LYS 2 -166.46 38.04 9 A ILE 11 -143.31 39.32 9 A LEU 19 -47.49 -84.64 9 A PHE 24 -91.94 50.58 9 A LEU 26 -139.43 -79.67 9 A ALA 32 -105.56 78.48 9 A PRO 37 -79.99 -76.28 9 A THR 39 -58.58 101.54 9 A LEU 41 -42.00 163.62 9 A SER 50 -106.21 -79.13 9 A CYS 51 -46.60 104.36 10 A VAL 3 -155.04 -36.17 10 A ILE 11 -150.64 40.47 10 A CYS 16 -97.14 -71.82 10 A GLN 25 -129.79 -144.78 10 A PRO 37 -83.84 -79.37 10 A THR 39 -57.40 97.43 10 A LEU 41 -42.72 159.98 10 A SER 50 -80.53 -89.51 10 A CYS 51 -39.86 99.31 10 A GLU 59 -108.18 -65.35 model building X-PLOR refinement X-PLOR phasing X-PLOR NMR STUDY OF 4FE-4S FERREDOXIN OF THERMATOGA MARITIMA 1 Y N 2 N N A ALA 44 A ALA 44 HELX_P A SER 50 A SER 50 1 1 7 disulf 2.030 A CYS 20 A SG CYS 20 1_555 A CYS 43 A SG CYS 43 1_555 metalc 2.301 A CYS 10 A SG CYS 10 1_555 A SF4 61 B FE1 SF4 1_555 metalc 2.300 A CYS 13 A SG CYS 13 1_555 A SF4 61 B FE2 SF4 1_555 metalc 2.296 A CYS 16 A SG CYS 16 1_555 A SF4 61 B FE3 SF4 1_555 metalc 2.307 A CYS 51 A SG CYS 51 1_555 A SF4 61 B FE4 SF4 1_555 ELECTRON TRANSPORT ELECTRON TRANSPORT, IRON-SULFUR FER_THEMA UNP 1 1 P46797 MKVRVDADACIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAKDAADSCPTGAISVEE 1 60 1ROF 1 60 P46797 A 1 1 60 2 anti-parallel A ARG 4 A ARG 4 A VAL 5 A VAL 5 A ILE 56 A ILE 56 A SER 57 A SER 57 BINDING SITE FOR RESIDUE SF4 A 61 A SF4 61 Software 9 A CYS 10 A CYS 10 9 1_555 A CYS 13 A CYS 13 9 1_555 A GLY 14 A GLY 14 9 1_555 A VAL 15 A VAL 15 9 1_555 A CYS 16 A CYS 16 9 1_555 A ALA 32 A ALA 32 9 1_555 A CYS 51 A CYS 51 9 1_555 A PRO 52 A PRO 52 9 1_555 A THR 53 A THR 53 9 1_555 1 P 1