0.016302 0.009412 0.000000 0.000000 0.018823 0.000000 0.000000 0.000000 0.010734 0.00000 0.00000 0.00000 Deane, J.E. Ryan, D.P. Maher, M.J. Kwan, A.H.Y. Bacca, M. Mackay, J.P. Guss, J.M. Visvader, J.E. Matthews, J.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 61.344 61.344 93.159 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer UK Embo J. EMJODG 0897 0261-4189 23 3589 3598 10.1038/sj.emboj.7600376 15343268 Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex 2004 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 59 1484 1486 10.1107/S0907444903011843 12876360 Crystallization of FLINC4, an intramolecular LMO4-ldb1 complex 2003 10.2210/pdb1rut/pdb pdb_00001rut 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors IMAGE PLATE 2003-01-24 MARRESEARCH Si (111) asymmetric cut, horizontal focus MAD M x-ray 1 1.08 1.0 1.282 1.0 1.170 1.0 1.283 1.0 BL7-1 SSRL 1.08, 1.282, 1.170, 1.283 SYNCHROTRON SSRL BEAMLINE BL7-1 Fusion of LMO4 residues 16-152 to ldb1 LID residues 300-339 via a flexible linker with sequence GGSGGSGGSGG 20195.641 Fusion protein of Lmo4 protein and LIM domain-binding protein 1 C52S, C64S 1 man polymer 65.409 ZINC ION 4 syn non-polymer 18.015 water 194 nat water FLINC4 no no GSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGACSACGQSIP ASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPTALINGHLNSGGSGGSGGSGGDVMVVGEPTLMG GEFGDEDERLITRLENTQFDAANGIDDE GSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGACSACGQSIP ASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHDRPTALINGHLNSGGSGGSGGSGGDVMVVGEPTLMG GEFGDEDERLITRLENTQFDAANGIDDE X polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample 1 137 lmo4, ldb1 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21 (DE3) Plasmid pGEX-2T house mouse Mus Escherichia Escherichia coli sample 149 188 lmo4, ldb1 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21 (DE3) Plasmid pGEX-2T 1 2.50 50.34 VAPOR DIFFUSION, HANGING DROP 6.7 1.0M ammonium sulfate, 0.1M MES, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 entity_src_gen database_2 pdbx_struct_conn_angle pdbx_struct_special_symmetry struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Source and taxonomy Database references Derived calculations 1 0 2004-10-12 1 1 2008-04-29 1 2 2011-07-13 1 3 2017-08-23 1 4 2021-11-10 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Complex of LMO4 LIM1 domain with ldb1 LID domain RCSB Y PDBJ 2003-12-11 REL REL ZN ZINC ION HOH water ZN 601 2 ZN ZN 601 X ZN 602 2 ZN ZN 602 X ZN 603 2 ZN ZN 603 X ZN 604 2 ZN ZN 604 X HOH 1 3 HOH HOH 605 X HOH 2 3 HOH HOH 606 X HOH 3 3 HOH HOH 607 X HOH 4 3 HOH HOH 608 X HOH 5 3 HOH HOH 609 X HOH 6 3 HOH HOH 610 X HOH 7 3 HOH HOH 611 X HOH 8 3 HOH HOH 612 X HOH 9 3 HOH HOH 613 X HOH 10 3 HOH HOH 614 X HOH 11 3 HOH HOH 615 X HOH 12 3 HOH HOH 616 X HOH 13 3 HOH HOH 617 X HOH 14 3 HOH HOH 618 X HOH 15 3 HOH HOH 619 X HOH 16 3 HOH HOH 620 X HOH 17 3 HOH HOH 621 X HOH 18 3 HOH HOH 622 X HOH 19 3 HOH HOH 623 X HOH 20 3 HOH HOH 624 X HOH 21 3 HOH HOH 625 X HOH 22 3 HOH HOH 626 X HOH 23 3 HOH HOH 627 X HOH 24 3 HOH HOH 628 X HOH 25 3 HOH HOH 629 X HOH 26 3 HOH HOH 630 X HOH 27 3 HOH HOH 631 X HOH 28 3 HOH HOH 632 X HOH 29 3 HOH HOH 633 X HOH 30 3 HOH HOH 634 X HOH 31 3 HOH HOH 635 X HOH 32 3 HOH HOH 636 X HOH 33 3 HOH HOH 637 X HOH 34 3 HOH HOH 638 X HOH 35 3 HOH HOH 639 X HOH 36 3 HOH HOH 640 X HOH 37 3 HOH HOH 641 X HOH 38 3 HOH HOH 642 X HOH 39 3 HOH HOH 643 X HOH 40 3 HOH HOH 644 X HOH 41 3 HOH HOH 645 X HOH 42 3 HOH HOH 646 X HOH 43 3 HOH HOH 647 X HOH 44 3 HOH HOH 648 X HOH 45 3 HOH HOH 649 X HOH 46 3 HOH HOH 650 X HOH 47 3 HOH HOH 651 X HOH 48 3 HOH HOH 652 X HOH 49 3 HOH HOH 653 X HOH 50 3 HOH HOH 654 X HOH 51 3 HOH HOH 655 X HOH 52 3 HOH HOH 656 X HOH 53 3 HOH HOH 657 X HOH 54 3 HOH HOH 658 X HOH 55 3 HOH HOH 659 X HOH 56 3 HOH HOH 660 X HOH 57 3 HOH HOH 661 X HOH 58 3 HOH HOH 662 X HOH 59 3 HOH HOH 663 X HOH 60 3 HOH HOH 664 X HOH 61 3 HOH HOH 665 X HOH 62 3 HOH HOH 666 X HOH 63 3 HOH HOH 667 X HOH 64 3 HOH HOH 668 X HOH 65 3 HOH HOH 669 X HOH 66 3 HOH HOH 670 X HOH 67 3 HOH HOH 671 X HOH 68 3 HOH HOH 672 X HOH 69 3 HOH HOH 673 X HOH 70 3 HOH HOH 674 X HOH 71 3 HOH HOH 675 X HOH 72 3 HOH HOH 676 X HOH 73 3 HOH HOH 677 X HOH 74 3 HOH HOH 678 X HOH 75 3 HOH HOH 679 X HOH 76 3 HOH HOH 680 X HOH 77 3 HOH HOH 681 X HOH 78 3 HOH HOH 682 X HOH 79 3 HOH HOH 683 X HOH 80 3 HOH HOH 684 X HOH 81 3 HOH HOH 685 X HOH 82 3 HOH HOH 686 X HOH 83 3 HOH HOH 687 X HOH 84 3 HOH HOH 688 X HOH 85 3 HOH HOH 689 X HOH 86 3 HOH HOH 690 X HOH 87 3 HOH HOH 691 X HOH 88 3 HOH HOH 692 X HOH 89 3 HOH HOH 693 X HOH 90 3 HOH HOH 694 X HOH 91 3 HOH HOH 695 X HOH 92 3 HOH HOH 696 X HOH 93 3 HOH HOH 697 X HOH 94 3 HOH HOH 698 X HOH 95 3 HOH HOH 699 X HOH 96 3 HOH HOH 700 X HOH 97 3 HOH HOH 701 X HOH 98 3 HOH HOH 702 X HOH 99 3 HOH HOH 703 X HOH 100 3 HOH HOH 704 X HOH 101 3 HOH HOH 705 X HOH 102 3 HOH HOH 706 X HOH 103 3 HOH HOH 707 X HOH 104 3 HOH HOH 708 X HOH 105 3 HOH HOH 709 X HOH 106 3 HOH HOH 710 X HOH 107 3 HOH HOH 711 X HOH 108 3 HOH HOH 712 X HOH 109 3 HOH HOH 713 X HOH 110 3 HOH HOH 714 X HOH 111 3 HOH HOH 715 X HOH 112 3 HOH HOH 716 X HOH 113 3 HOH HOH 717 X HOH 114 3 HOH HOH 718 X HOH 115 3 HOH HOH 719 X HOH 116 3 HOH HOH 720 X HOH 117 3 HOH HOH 721 X HOH 118 3 HOH HOH 722 X HOH 119 3 HOH HOH 723 X HOH 120 3 HOH HOH 724 X HOH 121 3 HOH HOH 725 X HOH 122 3 HOH HOH 726 X HOH 123 3 HOH HOH 727 X HOH 124 3 HOH HOH 728 X HOH 125 3 HOH HOH 729 X HOH 126 3 HOH HOH 730 X HOH 127 3 HOH HOH 731 X HOH 128 3 HOH HOH 732 X HOH 129 3 HOH HOH 733 X HOH 130 3 HOH HOH 734 X HOH 131 3 HOH HOH 735 X HOH 132 3 HOH HOH 736 X HOH 133 3 HOH HOH 737 X HOH 134 3 HOH HOH 738 X HOH 135 3 HOH HOH 739 X HOH 136 3 HOH HOH 740 X HOH 137 3 HOH HOH 741 X HOH 138 3 HOH HOH 742 X HOH 139 3 HOH HOH 743 X HOH 140 3 HOH HOH 744 X HOH 141 3 HOH HOH 745 X HOH 142 3 HOH HOH 746 X HOH 143 3 HOH HOH 747 X HOH 144 3 HOH HOH 748 X HOH 145 3 HOH HOH 749 X HOH 146 3 HOH HOH 750 X HOH 147 3 HOH HOH 751 X HOH 148 3 HOH HOH 752 X HOH 149 3 HOH HOH 753 X HOH 150 3 HOH HOH 754 X HOH 151 3 HOH HOH 755 X HOH 152 3 HOH HOH 756 X HOH 153 3 HOH HOH 757 X HOH 154 3 HOH HOH 758 X HOH 155 3 HOH HOH 759 X HOH 156 3 HOH HOH 760 X HOH 157 3 HOH HOH 761 X HOH 158 3 HOH HOH 762 X HOH 159 3 HOH HOH 763 X HOH 160 3 HOH HOH 764 X HOH 161 3 HOH HOH 765 X HOH 162 3 HOH HOH 766 X HOH 163 3 HOH HOH 767 X HOH 164 3 HOH HOH 768 X HOH 165 3 HOH HOH 769 X HOH 166 3 HOH HOH 770 X HOH 167 3 HOH HOH 771 X HOH 168 3 HOH HOH 772 X HOH 169 3 HOH HOH 773 X HOH 170 3 HOH HOH 774 X HOH 171 3 HOH HOH 775 X HOH 172 3 HOH HOH 776 X HOH 173 3 HOH HOH 777 X HOH 174 3 HOH HOH 778 X HOH 175 3 HOH HOH 779 X HOH 176 3 HOH HOH 780 X HOH 177 3 HOH HOH 781 X HOH 179 3 HOH HOH 782 X HOH 180 3 HOH HOH 783 X HOH 181 3 HOH HOH 784 X HOH 182 3 HOH HOH 785 X HOH 183 3 HOH HOH 786 X HOH 184 3 HOH HOH 787 X HOH 185 3 HOH HOH 788 X HOH 186 3 HOH HOH 789 X HOH 187 3 HOH HOH 790 X HOH 188 3 HOH HOH 791 X HOH 189 3 HOH HOH 792 X HOH 190 3 HOH HOH 793 X HOH 191 3 HOH HOH 794 X HOH 192 3 HOH HOH 795 X HOH 193 3 HOH HOH 796 X HOH 194 3 HOH HOH 797 X HOH 195 3 HOH HOH 798 X n 1 16 X n 2 17 X n 3 18 X SER 19 n 4 SER 19 X TRP 20 n 5 TRP 20 X LYS 21 n 6 LYS 21 X ARG 22 n 7 ARG 22 X CYS 23 n 8 CYS 23 X ALA 24 n 9 ALA 24 X GLY 25 n 10 GLY 25 X CYS 26 n 11 CYS 26 X GLY 27 n 12 GLY 27 X GLY 28 n 13 GLY 28 X LYS 29 n 14 LYS 29 X ILE 30 n 15 ILE 30 X ALA 31 n 16 ALA 31 X ASP 32 n 17 ASP 32 X ARG 33 n 18 ARG 33 X PHE 34 n 19 PHE 34 X LEU 35 n 20 LEU 35 X LEU 36 n 21 LEU 36 X TYR 37 n 22 TYR 37 X ALA 38 n 23 ALA 38 X MET 39 n 24 MET 39 X ASP 40 n 25 ASP 40 X SER 41 n 26 SER 41 X TYR 42 n 27 TYR 42 X TRP 43 n 28 TRP 43 X HIS 44 n 29 HIS 44 X SER 45 n 30 SER 45 X ARG 46 n 31 ARG 46 X CYS 47 n 32 CYS 47 X LEU 48 n 33 LEU 48 X LYS 49 n 34 LYS 49 X CYS 50 n 35 CYS 50 X SER 51 n 36 SER 51 X SER 52 n 37 SER 52 X CYS 53 n 38 CYS 53 X GLN 54 n 39 GLN 54 X ALA 55 n 40 ALA 55 X GLN 56 n 41 GLN 56 X LEU 57 n 42 LEU 57 X GLY 58 n 43 GLY 58 X ASP 59 n 44 ASP 59 X ILE 60 n 45 ILE 60 X GLY 61 n 46 GLY 61 X THR 62 n 47 THR 62 X SER 63 n 48 SER 63 X SER 64 n 49 SER 64 X TYR 65 n 50 TYR 65 X THR 66 n 51 THR 66 X LYS 67 n 52 LYS 67 X SER 68 n 53 SER 68 X GLY 69 n 54 GLY 69 X MET 70 n 55 MET 70 X ILE 71 n 56 ILE 71 X LEU 72 n 57 LEU 72 X CYS 73 n 58 CYS 73 X ARG 74 n 59 ARG 74 X ASN 75 n 60 ASN 75 X ASP 76 n 61 ASP 76 X TYR 77 n 62 TYR 77 X ILE 78 n 63 ILE 78 X ARG 79 n 64 ARG 79 X LEU 80 n 65 LEU 80 X PHE 81 n 66 PHE 81 X GLY 82 n 67 GLY 82 X ASN 83 n 68 ASN 83 X SER 84 n 69 SER 84 X GLY 85 n 70 GLY 85 X ALA 86 n 71 ALA 86 X CYS 87 n 72 CYS 87 X SER 88 n 73 SER 88 X ALA 89 n 74 ALA 89 X CYS 90 n 75 CYS 90 X GLY 91 n 76 GLY 91 X GLN 92 n 77 GLN 92 X SER 93 n 78 SER 93 X ILE 94 n 79 ILE 94 X PRO 95 n 80 PRO 95 X ALA 96 n 81 ALA 96 X SER 97 n 82 SER 97 X GLU 98 n 83 GLU 98 X LEU 99 n 84 LEU 99 X VAL 100 n 85 VAL 100 X MET 101 n 86 MET 101 X ARG 102 n 87 ARG 102 X ALA 103 n 88 ALA 103 X GLN 104 n 89 GLN 104 X GLY 105 n 90 GLY 105 X ASN 106 n 91 ASN 106 X VAL 107 n 92 VAL 107 X TYR 108 n 93 TYR 108 X HIS 109 n 94 HIS 109 X LEU 110 n 95 LEU 110 X LYS 111 n 96 LYS 111 X CYS 112 n 97 CYS 112 X PHE 113 n 98 PHE 113 X THR 114 n 99 THR 114 X CYS 115 n 100 CYS 115 X SER 116 n 101 SER 116 X THR 117 n 102 THR 117 X CYS 118 n 103 CYS 118 X ARG 119 n 104 ARG 119 X ASN 120 n 105 ASN 120 X ARG 121 n 106 ARG 121 X LEU 122 n 107 LEU 122 X VAL 123 n 108 VAL 123 X PRO 124 n 109 PRO 124 X GLY 125 n 110 GLY 125 X ASP 126 n 111 ASP 126 X ARG 127 n 112 ARG 127 X PHE 128 n 113 PHE 128 X HIS 129 n 114 HIS 129 X TYR 130 n 115 TYR 130 X ILE 131 n 116 ILE 131 X ASN 132 n 117 ASN 132 X GLY 133 n 118 GLY 133 X SER 134 n 119 SER 134 X LEU 135 n 120 LEU 135 X PHE 136 n 121 PHE 136 X CYS 137 n 122 CYS 137 X GLU 138 n 123 GLU 138 X HIS 139 n 124 HIS 139 X ASP 140 n 125 ASP 140 X ARG 141 n 126 ARG 141 X PRO 142 n 127 PRO 142 X THR 143 n 128 THR 143 X ALA 144 n 129 ALA 144 X LEU 145 n 130 LEU 145 X ILE 146 n 131 ILE 146 X n 132 147 X n 133 148 X n 134 149 X n 135 150 X n 136 151 X n 137 152 X n 138 201 X n 139 202 X n 140 203 X n 141 204 X n 142 205 X n 143 206 X n 144 207 X n 145 208 X n 146 209 X n 147 210 X GLY 211 n 148 GLY 211 X ASP 300 n 149 ASP 300 X VAL 301 n 150 VAL 301 X MET 302 n 151 MET 302 X VAL 303 n 152 VAL 303 X VAL 304 n 153 VAL 304 X GLY 305 n 154 GLY 305 X GLU 306 n 155 GLU 306 X PRO 307 n 156 PRO 307 X THR 308 n 157 THR 308 X LEU 309 n 158 LEU 309 X MET 310 n 159 MET 310 X GLY 311 n 160 GLY 311 X GLY 312 n 161 GLY 312 X GLU 313 n 162 GLU 313 X PHE 314 n 163 PHE 314 X GLY 315 n 164 GLY 315 X ASP 316 n 165 ASP 316 X GLU 317 n 166 GLU 317 X ASP 318 n 167 ASP 318 X GLU 319 n 168 GLU 319 X ARG 320 n 169 ARG 320 X LEU 321 n 170 LEU 321 X ILE 322 n 171 ILE 322 X THR 323 n 172 THR 323 X ARG 324 n 173 ARG 324 X LEU 325 n 174 LEU 325 X GLU 326 n 175 GLU 326 X ASN 327 n 176 ASN 327 X n 177 328 X n 178 329 X n 179 330 X n 180 331 X n 181 332 X n 182 333 X n 183 334 X n 184 335 X n 185 336 X n 186 337 X n 187 338 X n 188 339 X author_defined_assembly 1 monomeric X CYS 23 A SG CYS 8 1_555 X ZN 601 B ZN ZN 1_555 X CYS 26 A SG CYS 11 1_555 111.2 X CYS 23 A SG CYS 8 1_555 X ZN 601 B ZN ZN 1_555 X HIS 44 A ND1 HIS 29 1_555 104.7 X CYS 26 A SG CYS 11 1_555 X ZN 601 B ZN ZN 1_555 X HIS 44 A ND1 HIS 29 1_555 100.6 X CYS 23 A SG CYS 8 1_555 X ZN 601 B ZN ZN 1_555 X CYS 47 A SG CYS 32 1_555 110.4 X CYS 26 A SG CYS 11 1_555 X ZN 601 B ZN ZN 1_555 X CYS 47 A SG CYS 32 1_555 115.3 X HIS 44 A ND1 HIS 29 1_555 X ZN 601 B ZN ZN 1_555 X CYS 47 A SG CYS 32 1_555 113.8 X CYS 50 A SG CYS 35 1_555 X ZN 602 C ZN ZN 1_555 X CYS 53 A SG CYS 38 1_555 110.2 X CYS 50 A SG CYS 35 1_555 X ZN 602 C ZN ZN 1_555 X CYS 73 A SG CYS 58 1_555 115.1 X CYS 53 A SG CYS 38 1_555 X ZN 602 C ZN ZN 1_555 X CYS 73 A SG CYS 58 1_555 117.6 X CYS 50 A SG CYS 35 1_555 X ZN 602 C ZN ZN 1_555 X ASP 76 A OD2 ASP 61 1_555 108.0 X CYS 53 A SG CYS 38 1_555 X ZN 602 C ZN ZN 1_555 X ASP 76 A OD2 ASP 61 1_555 100.0 X CYS 73 A SG CYS 58 1_555 X ZN 602 C ZN ZN 1_555 X ASP 76 A OD2 ASP 61 1_555 104.1 X CYS 87 A SG CYS 72 1_555 X ZN 604 E ZN ZN 1_555 X CYS 90 A SG CYS 75 1_555 109.7 X CYS 87 A SG CYS 72 1_555 X ZN 604 E ZN ZN 1_555 X HIS 109 A ND1 HIS 94 1_555 101.7 X CYS 90 A SG CYS 75 1_555 X ZN 604 E ZN ZN 1_555 X HIS 109 A ND1 HIS 94 1_555 99.6 X CYS 87 A SG CYS 72 1_555 X ZN 604 E ZN ZN 1_555 X CYS 112 A SG CYS 97 1_555 114.0 X CYS 90 A SG CYS 75 1_555 X ZN 604 E ZN ZN 1_555 X CYS 112 A SG CYS 97 1_555 116.3 X HIS 109 A ND1 HIS 94 1_555 X ZN 604 E ZN ZN 1_555 X CYS 112 A SG CYS 97 1_555 113.8 X CYS 115 A SG CYS 100 1_555 X ZN 603 D ZN ZN 1_555 X CYS 118 A SG CYS 103 1_555 107.7 X CYS 115 A SG CYS 100 1_555 X ZN 603 D ZN ZN 1_555 X CYS 137 A SG CYS 122 1_555 113.7 X CYS 118 A SG CYS 103 1_555 X ZN 603 D ZN ZN 1_555 X CYS 137 A SG CYS 122 1_555 119.6 X CYS 115 A SG CYS 100 1_555 X ZN 603 D ZN ZN 1_555 X ASP 140 A OD2 ASP 125 1_555 108.2 X CYS 118 A SG CYS 103 1_555 X ZN 603 D ZN ZN 1_555 X ASP 140 A OD2 ASP 125 1_555 101.6 X CYS 137 A SG CYS 122 1_555 X ZN 603 D ZN ZN 1_555 X ASP 140 A OD2 ASP 125 1_555 104.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 X O SER 41 A O SER 26 X N ALA 38 A N ALA 23 X N LEU 35 A N LEU 20 X O LEU 325 A O LEU 174 X O LEU 72 A O LEU 57 X N TYR 65 A N TYR 50 X N SER 64 A N SER 49 X O ARG 320 A O ARG 169 X N GLY 85 A N GLY 70 X O ILE 94 A O ILE 79 X O TYR 108 A O TYR 93 X N MET 101 A N MET 86 X N VAL 100 A N VAL 85 X O THR 308 A O THR 157 X O PHE 136 A O PHE 121 X N HIS 129 A N HIS 114 X N PHE 128 A N PHE 113 X O MET 302 A O MET 151 1 X HOH 623 F HOH 1 X HOH 687 F HOH 1 X HOH 737 F HOH 1 X GLY 16 A GLY 1 1 Y 1 X SER 17 A SER 2 1 Y 1 X LEU 18 A LEU 3 1 Y 1 X ASN 147 A ASN 132 1 Y 1 X GLY 148 A GLY 133 1 Y 1 X HIS 149 A HIS 134 1 Y 1 X LEU 150 A LEU 135 1 Y 1 X ASN 151 A ASN 136 1 Y 1 X SER 152 A SER 137 1 Y 1 X GLY 201 A GLY 138 1 Y 1 X GLY 202 A GLY 139 1 Y 1 X SER 203 A SER 140 1 Y 1 X GLY 204 A GLY 141 1 Y 1 X GLY 205 A GLY 142 1 Y 1 X SER 206 A SER 143 1 Y 1 X GLY 207 A GLY 144 1 Y 1 X GLY 208 A GLY 145 1 Y 1 X SER 209 A SER 146 1 Y 1 X GLY 210 A GLY 147 1 Y 1 X THR 328 A THR 177 1 Y 1 X GLN 329 A GLN 178 1 Y 1 X PHE 330 A PHE 179 1 Y 1 X ASP 331 A ASP 180 1 Y 1 X ALA 332 A ALA 181 1 Y 1 X ALA 333 A ALA 182 1 Y 1 X ASN 334 A ASN 183 1 Y 1 X GLY 335 A GLY 184 1 Y 1 X ILE 336 A ILE 185 1 Y 1 X ASP 337 A ASP 186 1 Y 1 X ASP 338 A ASP 187 1 Y 1 X GLU 339 A GLU 188 1 Y 19.986 -0.01 0.00 0.00 -0.01 0.00 0.01 0.965 0.944 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.19316 0.15499 0.1568 0.15686 1.30 46.13 2291 45437 43146 5.0 95.0 0.536 0.023 RANDOM 1 anisotropic THROUGHOUT 0 0 MAD 0.045 0.047 0.80 0.80 1.40 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.30 46.13 194 1448 4 0 1250 0.008 0.021 1275 0.002 0.020 1112 1.242 1.945 1718 0.780 3.000 2594 6.234 5.000 161 0.082 0.200 181 0.005 0.020 1453 0.001 0.020 273 0.195 0.200 221 0.250 0.200 1285 0.080 0.200 798 0.101 0.200 128 0.029 0.200 2 0.138 0.200 12 0.272 0.200 65 0.070 0.200 18 3.824 2.000 791 4.959 3.000 1266 5.181 2.000 484 6.550 3.000 452 1.382 1.000 1275 10.447 8.000 198 8.019 8.000 1250 0.273 0.249 1.336 142 2880 3022 20 16.442 1.3 50 1RUT 45526 45441 -3.0 0.04 1 18.0 2.6 91.3 0.291 1.3 1.35 2.4 3907 2.0 79.2 refinement REFMAC 5.1.24 data reduction DENZO data scaling SCALEPACK phasing SOLVE Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain 1 N N 2 N N 2 N N 2 N N 2 N N 3 N N X HIS 44 A HIS 29 HELX_P X LEU 48 A LEU 33 5 1 5 X GLN 56 A GLN 41 HELX_P X GLY 61 A GLY 46 1 2 6 X CYS 73 A CYS 58 HELX_P X GLY 82 A GLY 67 1 3 10 X HIS 109 A HIS 94 HELX_P X PHE 113 A PHE 98 5 4 5 X HIS 139 A HIS 124 HELX_P X ARG 141 A ARG 126 5 5 3 metalc 2.342 X CYS 23 A SG CYS 8 1_555 X ZN 601 B ZN ZN 1_555 metalc 2.316 X CYS 26 A SG CYS 11 1_555 X ZN 601 B ZN ZN 1_555 metalc 2.097 X HIS 44 A ND1 HIS 29 1_555 X ZN 601 B ZN ZN 1_555 metalc 2.293 X CYS 47 A SG CYS 32 1_555 X ZN 601 B ZN ZN 1_555 metalc 2.348 X CYS 50 A SG CYS 35 1_555 X ZN 602 C ZN ZN 1_555 metalc 2.291 X CYS 53 A SG CYS 38 1_555 X ZN 602 C ZN ZN 1_555 metalc 2.307 X CYS 73 A SG CYS 58 1_555 X ZN 602 C ZN ZN 1_555 metalc 2.014 X ASP 76 A OD2 ASP 61 1_555 X ZN 602 C ZN ZN 1_555 metalc 2.335 X CYS 87 A SG CYS 72 1_555 X ZN 604 E ZN ZN 1_555 metalc 2.302 X CYS 90 A SG CYS 75 1_555 X ZN 604 E ZN ZN 1_555 metalc 2.115 X HIS 109 A ND1 HIS 94 1_555 X ZN 604 E ZN ZN 1_555 metalc 2.265 X CYS 112 A SG CYS 97 1_555 X ZN 604 E ZN ZN 1_555 metalc 2.348 X CYS 115 A SG CYS 100 1_555 X ZN 603 D ZN ZN 1_555 metalc 2.307 X CYS 118 A SG CYS 103 1_555 X ZN 603 D ZN ZN 1_555 metalc 2.280 X CYS 137 A SG CYS 122 1_555 X ZN 603 D ZN ZN 1_555 metalc 1.979 X ASP 140 A OD2 ASP 125 1_555 X ZN 603 D ZN ZN 1_555 PROTEIN BINDING b-tandem zipper, LIM domain, fusion protein, PROTEIN BINDING AAH03488 GB 1 13097522 LDB1_MOUSE UNP 1 P70662 16 152 1RUT 16 152 13097522 X 1 1 137 300 339 1RUT 300 339 P70662 X 2 149 188 1 CYS engineered mutation SER 52 1RUT X 13097522 GB 52 37 1 CYS engineered mutation SER 64 1RUT X 13097522 GB 64 49 1 linker GLY 201 1RUT X 13097522 GB 138 1 linker GLY 202 1RUT X 13097522 GB 139 1 linker SER 203 1RUT X 13097522 GB 140 1 linker GLY 204 1RUT X 13097522 GB 141 1 linker GLY 205 1RUT X 13097522 GB 142 1 linker SER 206 1RUT X 13097522 GB 143 1 linker GLY 207 1RUT X 13097522 GB 144 1 linker GLY 208 1RUT X 13097522 GB 145 1 linker SER 209 1RUT X 13097522 GB 146 1 linker GLY 210 1RUT X 13097522 GB 147 1 linker GLY 211 1RUT X 13097522 GB 148 3 3 2 3 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel X SER 41 A SER 26 X TRP 43 A TRP 28 X PHE 34 A PHE 19 X ALA 38 A ALA 23 X THR 323 A THR 172 X GLU 326 A GLU 175 X MET 70 A MET 55 X LEU 72 A LEU 57 X SER 63 A SER 48 X LYS 67 A LYS 52 X GLU 319 A GLU 168 X LEU 321 A LEU 170 X GLY 85 A GLY 70 X ALA 86 A ALA 71 X SER 93 A SER 78 X ILE 94 A ILE 79 X ASN 106 A ASN 91 X TYR 108 A TYR 93 X LEU 99 A LEU 84 X ALA 103 A ALA 88 X THR 308 A THR 157 X LEU 309 A LEU 158 X SER 134 A SER 119 X CYS 137 A CYS 122 X ARG 127 A ARG 112 X ILE 131 A ILE 116 X MET 302 A MET 151 X VAL 303 A VAL 152 BINDING SITE FOR RESIDUE ZN X 601 X ZN 601 Software 4 BINDING SITE FOR RESIDUE ZN X 602 X ZN 602 Software 4 BINDING SITE FOR RESIDUE ZN X 603 X ZN 603 Software 4 BINDING SITE FOR RESIDUE ZN X 604 X ZN 604 Software 4 X CYS 23 A CYS 8 4 1_555 X CYS 26 A CYS 11 4 1_555 X HIS 44 A HIS 29 4 1_555 X CYS 47 A CYS 32 4 1_555 X CYS 50 A CYS 35 4 1_555 X CYS 53 A CYS 38 4 1_555 X CYS 73 A CYS 58 4 1_555 X ASP 76 A ASP 61 4 1_555 X CYS 115 A CYS 100 4 1_555 X CYS 118 A CYS 103 4 1_555 X CYS 137 A CYS 122 4 1_555 X ASP 140 A ASP 125 4 1_555 X CYS 87 A CYS 72 4 1_555 X CYS 90 A CYS 75 4 1_555 X HIS 109 A HIS 94 4 1_555 X CYS 112 A CYS 97 4 1_555 149 P 3 1 2